Nucleic acid and amino acid sequences relating to Staphylococcus epidermidis for diagnostics and therapeutics

ABSTRACT

The invention provides isolated polypeptide and nucleic acid sequences derived from  Staphylococcus epidermidis  that are useful in diagnosis and therapy of pathological conditions; antibodies against the polypeptides; and methods for the production of the polypeptides. The invention also provides methods for the detection, prevention and treatment of pathological conditions resulting from bacterial infection.

RELATED APPLICATIONS

This application is a Continuation-in-Part which claims priority to U.S. Application No. 09/134,001, filed Aug. 13, 1998, now U.S. Pat. No. 6,380,370, issued Apr. 30, 2002, which claims the benefit of both U.S. Provisional Application No. 60/064,964, filed Nov. 8, 1997 and U.S. Provisional Application No. 60/055,779, filed Aug. 14, 1997, the contents of all of which are incorporated in their entirety.

BACKGROUND OF THE INVENTION

Staphylococcus epidermidis (S. epidermidis) is a species of staphylococcal bacteria that are Gram-positive, nonmotile, nonpigmented and coagulase-negative cocci, which are mainly found on the skin and mucous membrane of warm-blooded animals. Their large numbers and ubiquitous distribution result in frequent contamination of specimens collected from or through the skin, making these organisms amongst the most frequently isolated in the clinical laboratory. In the past, S. epidermidis was rarely the cause of significant infections, but with the increasing use of implanted catheters and prosthetic devices, it has emerged as an important agent of hospital-acquired infections and has been recognized as a true pathogen (Lowy and Hammer, 1983, Ann Intern Med, 99: 834–9; Blum and Rodvold, 1987, Clin Pharm, 6: 464–75; Hamory, Parisi et al., 1987, Am J Infect Control, 15: 59–74). S. epidermidis is a major cause of infection of indwelling foreign devices such as, orthopedic devices, intravenous catheters, prosthetic heart valves, central nervous system shunts, and peritoneal dialysis catheters (Blum and Rodvold, 1987, Clin Pharm, 6: 464–75; Archer, 1988, J Antimicrob Chemother, 21 Suppl C: 133–8)(Lowy and Hammer, 1983, Ann Intern Med, 99: 834–9; Hamory, Parisi et al., Staphylococcus 1987, Am J Infect Control, 15: 59–74). In addition S. epidermidis is a common cause of postoperative wound infections, bacteremia of immunosuppressed patients, intensive-care unit patients and premature newborns (MacLowry, 1983, Am J Med, 75: 2–6)(Eykyn, 1988, Lancet, 1: 100–4). According to a national survey (Centers for Disease Control, 1981:7) S. epidermidis caused 8.9% of primary nosocomial bacteremias.

Treatment of S. epidermidis infections remains difficult because of the occult nature, association with foreign bodies, and frequent resistance to antimicrobial agents. Ordinarily, S. epidermidis is an organism with low virulence, however breaks in host defense caused by surgery, catheter placement, prosthesis insertion or immuno-suppression is prerequisite for infection. The presence of foreign bodies itself facilitates infection by protecting the organism from elimination by host defenses or antimicrobial therapy (Lowy and Hammer, 1983, Ann Intern Med, 99: 834–9). Furthermore, S. epidermidis due to its ability to produce extracellular polysaccharide material or slime, may be uniquely adapted to adhere to smooth surfaces such as plastics or metal. Slime producing strains of S. epidermidis appear to be more pathogenic than non-slime producing strains (Christensen, Simpson et al., 1983, Infect Immun, 40: 407–10; Peters and Pulverer, 1984, J Antimicrob Chemother, 14 Suppl D: 67–71; Gallimore, Gagnon et al., 1991, J Infect Dis, 164: 1220–3). This property and many factors are involved in the pathogenesis of device associated infections. Despite the increased recognition as a pathogen, S. epidermidis infections are difficult to diagnose. Differentiating clinically important from clinically unimportant bacterial isolates of S. epidermidis is difficult because of the high rate of contamination.

Although laboratory isolates of S. epidermidis have generally been susceptible to semisynthetic penicillins (methicillin, nafcillin, oxacillin), cephalosporins, amino-glycosides, vancomycin and rafampin, recent clinical isolates have had an increased resistance. Recent reports (Karchmer, 1985, Am J Med, 78: 116–27; Karchmer, 1991, J Hosp Infect, 18 Suppl A: 355–66) show that 83% of S. epidermidis isolates from patients with prosthetic valve endocarditis are methicillin resistant and 32% are gentamicin resistant as well. Multi-drug resistant staphylococci have emerged in the midst of high level use of penicillin and aminoglycosides (Centers for Disease Control and Prevention, 1993 MMWR 42:597; and S. Handwerger et al., 1993, Clin Infect Dis 16:750).

The use of antibiotics for therapeutics and prophylactic purposes, promotes the selection of resistant organisms and the spread of antibiotic resistance genes among bacteria. Previous studies have shown that virtually all staphylococci carry some antibiotic resistance genes on naturally occurring extrachromosomal mobile genetic elements, such as the plasmids. Survey and analysis of plasmids in clinical isolates of S. epidermidis have shown that more that 80% of isolates carry plasmids and in several cases more than one plasmid (Archer et al., 1982, Infect Immun, 35:627–632; Kloos et al., 1981, Can J Microbiol, 27:271–278; Moller, 1988, J Hosp Infect 12:19–27). Though the most important forms of resistance has been the inactivation of antibiotics, particularly penicillins and cephalosporins, recent clinical isolates have resistance to one or more of the following antibiotics, methicillin, tetracycline, erythromycin, gentamycin, kanamycin and chloramphenicol. In fact due to the wide spread occurrence of plasmids and their involvement in antibiotic resistance, plasmid profiling has been used as an epidemiological reagent to study nosocomial infections. This invention relates to isolated nucleic acids and polypeptides derived from S. epidermidis>plasmids that are useful as molecular targets for diagnosis, prophylaxis and treatment of pathological conditions, as well as materials and methods for the diagnosis, prevention, and amelioration of pathological conditions resulting from bacterial infection.

These concerns point to the need for diagnostic tools and therapeutics aimed at proper identification of strain and eradication of virulence. The design of vaccines that will limit the spread of infection and halt transfer of resistance factors is very desirable.

SUMMARY OF THE INVENTION

The present invention fulfills the need for diagnostic tools and therapeutics by providing bacterial-specific compositions and methods for detecting Staphylococcus species including S. epidermidis, as well as compositions and methods useful for treating and preventing Staphylococcus infection, in particular, S. epidermidis infection, in vertebrates including mammals.

The present invention encompasses isolated nucleic acids and polypeptides derived from S. epidermidis that are useful as reagents for diagnosis of bacterial disease, components of effective antibacterial vaccines, and/or as targets for antibacterial drugs including anti-S. epidermidis drugs. They can also be used to detect the presence of S. epidermidis and other Staphylococcus species in a sample; and in screening compounds for the ability to interfere with the S. epidermidis life cycle or to inhibit S. epidermidis infection. They also have use as biocontrol agents for plants.

In one aspect, the invention features compositions of nucleic acids corresponding to entire coding sequences of S. epidermidis proteins (SEQ ID NO: 1–SEQ ID NO: 3702), including surface or secreted proteins or parts thereof, nucleic acids capable of binding mRNA from S. epidermidis proteins to block protein translation, and methods for producing S. epidermidis proteins or parts thereof using peptide synthesis and recombinant DNA techniques. This invention also features antibodies and nucleic acids useful as probes to detect S. epidermidis infection. In addition, vaccine compositions and methods for the protection or treatment of infection by S. epidermidis are within the scope of this invention.

In another aspect, the invention relates to the nucliec acids corresponding to 2 naturally occurring plasmids of S. epidermidis (SEQ ID NO: 3703–SEQ ID NO: 3772) and the corresponding amino acid sequences (SEQ ID NO: 7475–SEQ ID NO: 7544).

The nucleotide sequences provided in SEQ ID NO: 1–SEQ ID NO: 3772, a fragment thereof, or a nucleotide sequence at least about 99.5% identical to a sequence contained within SEQ ID NO: 1–SEQ ID NO: 3772 may be “provided” in a variety of medias to facilitate use thereof. As used herein, “provided” refers to a manufacture, other than an isolated nucleic acid molecule, which contains a nucleotide sequence of the present invention, i.e., the nucleotide sequence provided in SEQ ID NO: 1–SEQ ID NO: 3772, a fragment thereof, or a nucleotide sequence at least about 99.5% identical to a sequence contained within SEQ ID NO: 1–SEQ ID NO: 3772. Uses for and methods for providing nucleotide sequences in a variety of media is well known in the art (see e.g., EPO Publication No. EP 0 756 006).

In one application of this embodiment, a nucleotide sequence of the present invention can be recorded on computer readable media. As used herein, “computer readable media” refers to any media which can be read and accessed directly by a computer. Such media include, but are not limited to: magnetic storage media, such as floppy discs, hard disc storage media, and magnetic tape; optical storage media such as CD-ROM; electrical storage media such as RAM and ROM; and hybrids of these categories such as magnetic/optical storage media. A person skilled in the art can readily appreciate how any of the presently known computer readable media can be used to create a manufacture comprising computer readable media having recorded thereon a nucleotide sequence of the present invention.

As used herein, “recorded” refers to a process for storing information on computer readable media. A person skilled in the art can readily adopt any of the presently known methods for recording information on computer readable media to generate manufactures comprising the nucleotide sequence information of the present invention.

A variety of data storage structures are available to a person skilled in the art for creating a computer readable media having recorded thereon a nucleotide sequence of the present invention. The choice of the data storage structure will generally be based on the means chosen to access the stored information. In addition, a variety of data processor programs and formats can be used to store the nucleotide sequence information of the present invention on computer readable media. The sequence information can be represented in a word processing text file, formatted in commercially-available software such as WordPerfect and Microsoft Word, or represented in the form of an ASCII file, stored in a database application, such as DB2, Sybase, Oracle, or the like. A person skilled in the art can readily adapt any number of data processor structuring formats (e.g. text file or database) in order to obtain computer readable media having recorded thereon the nucleotide sequence information of the present invention.

By providing the nucleotide sequence of SEQ ID NO: 1–SEQ ID NO: 3772, a fragment thereof, or a nucleotide sequence at least about 99.5% identical to SEQ ID NO: 1-SEQ ID NO: 3772 in computer readable form, a person skilled in the art can routinely access the coding sequence information for a variety of purposes. Computer software is publicly available which allows a person skilled in the art to access sequence information provided in a computer readable media. Examples of such computer software include programs of the “Staden Package”, “DNA Star”, “MacVector”, GCG “Wisconsin Package” (Genetics Computer Group, Madison, Wis.) and “NCBI Toolbox” (National Center For Biotechnology Information). Suitable programs are described, for example, in Martin J. Bishop, ed., Guide to Human Genome Computing, 2d Edition, Academic Press, San Diego, Calif. (1998); and Leonard F. Peruski, Jr., and Anne Harwood Peruski, The Internet and the New Biology: Tools for Genomic and Molecular Research, American Society for Microbiology, Washington, D.C. (1997).

Computer algorithms enable the identification of S. epidermidis open reading frames (ORFs) within SEQ ID NO: 1–SEQ ID NO: 3772 which contain homology to ORFs or proteins from other organisms. Examples of such similarity-search algorithms include the BLAST [Altschul et al., J. Mol. Biol. 215:403–410 (1990)] and Smith-Waterman [Smith and Waterman (1981) Advances in Applied Mathematics, 2:482–489] search algorithms. Suitable search algorithms are described, for example, in Martin J. Bishop, ed., Guide to Human Genome Computing, 2d Edition, Academic Press, San Diego, Calif. (1998); and Leonard F. Peruski, Jr., and Anne Harwood Peruski, The Internet and the New Biology: Tools for Genomic and Molecular Research, American Society for Microbiology, Washington, D.C. (1997). Such algorithms are utilized on computer systems as exemplified below. The ORFs so identified represent protein encoding fragments within the S. epidermidis genome and S. epidermidis plasmid sand are useful in producing commercially important proteins such as enzymes used in fermentation reactions and in the production of commercially useful metabolites.

The present invention further provides systems, particularly computer-based systems, which contain the sequence information described herein. Such systems are designed to identify commercially important fragments of the S. epidermidis genome and plasmids. As used herein, “a computer-based system” refers to the hardware means, software means, and data storage means used to analyze the nucleotide sequence information of the present invention. The minimum hardware means of the computer-based systems of the present invention comprises a central processing unit (CPU), input means, output means, and data storage means. A person skilled in the art can readily appreciate that any one of the currently available computer-based systems is suitable for use in the present invention. The computer- based systems of the present invention comprise a data storage means having stored therein a nucleotide sequence of the present invention and the necessary hardware means and software means for supporting and implementing a search means. As used herein, “data storage means” refers to memory which can store nucleotide sequence information of the present invention, or a memory access means which can access manufactures having recorded thereon the nucleotide sequence information of the present invention.

As used herein, “search means” refers to one or more programs which are implemented on the computer-based system to compare a target sequence or target structural motif with the sequence information stored within the data storage means. Search means are used to identify fragments or regions of the S. epidermidis genome and plasmids which are similar to, or “match”, a particular target sequence or target motif. A variety of known algorithms are known in the art and have been disclosed publicly, and a variety of commercially available software for conducting homology-based similarity searches are available and can be used in the computer-based systems of the present invention. Examples of such software includes, but is not limited to, FASTA (GCG Wisconsin Package), Bic_SW (Compugen Bioccelerator), BLASTN2, BLASTP2, BLASTX2 (NCBI) and Motifs (GCG). Suitable software programs are described, for example, in Martin J. Bishop, ed., Guide to Human Genome Computing, 2d Edition, Academic Press, San Diego, Calif. (1998); and Leonard F. Peruski, Jr., and Anne Harwood Peruski, The Internet and the New Biology: Tools for Genomic and Molecular Research, American Society for Microbiology, Washington, D.C. (1997). A person skilled in the art can readily recognize that any one of the available algorithms or implementing software packages for conducting homology searches can be adapted for use in the present computer-based systems.

As used herein, a “target sequence” can be any DNA or amino acid sequence of six or more nucleotides or two or more amino acids. A person skilled in the art can readily recognize that the longer a target sequence is, the less likely a target sequence will be present as a random occurrence in the database. The most preferred sequence length of a target sequence is from about 10 to 100 amino acids or from about 30 to 300 nucleotide residues. However, it is well recognized that many genes are longer than 500 amino acids, or 1.5 kb in length, and that commercially important fragments of the S. epidermidis genome and plasmids from S. epidermidis, such as sequence fragments involved in gene expression and protein processing, will often be shorter than 30 nucleotides.

As used herein, “a target structural motif,” or “target motif,” refers to any rationally selected sequence or combination of sequences in which the sequence(s) are chosen based on a specific functional domain or three-dimensional configuration which is formed upon the folding of the target polypeptide. There are a variety of target motifs known in the art. Protein target motifs include, but are not limited to, enzymatic active sites, membrane-spanning regions, and signal sequences. Nucleic acid target motifs include, but are not limited to, promoter sequences, hairpin structures and inducible expression elements (protein binding sequences).

A variety of structural formats for the input and output means can be used to input and output the information in the computer-based systems of the present invention. A preferred format for an output means ranks fragments of the S. epidermidis genome and plasmids possessing varying degrees of homology to the target sequence or target motif. Such presentation provides a person skilled in the art with a ranking of sequences which contain various amounts of the target sequence or target motif and identifies the degree of homology contained in the identified fragment.

A variety of comparing means can be used to compare a target sequence or target motif with the data storage means to identify sequence fragments of the S. epidermidis genome and plasmids. In the present examples, implementing software which implement the BLASTP2 and bic_SW algorithms (Altschul et al., J. Mol. Biol. 215:403–410 (1990); Compugen Biocellerator) was used to identify open reading frames within the S. epidermidis genome and plasmids. A person skilled in the art can readily recognize that any one of the publicly available homology search programs can be used as the search means for the computer-based systems of the present invention. Suitable programs are described, for example, in Martin J. Bishop, ed., Guide to Human Genome Computing, 2d Edition, Academic Press, San Diego, Calif. (1998); and Leonard F. Peruski, Jr., and Anne Harwood Peruski, The Internet and the New Biology: Tools for Genomic and Molecular Research, American Society for Microbiology, Washington, D.C. (1997).

The invention features S. epidermidis polypeptides, preferably a substantially pure preparation of an S. epidermidis polypeptide, or a recombinant S. epidermidis polypeptide. In preferred embodiments: the polypeptide has biological activity; the polypeptide has an amino acid sequence at least about 60%, 70%, 80%, 90%, 95%, 98%, or 99% identical to an amino acid sequence of the invention contained in the Sequence Listing, preferably it has about 65% sequence identity with an amino acid sequence of the invention contained in the Sequence Listing, and most preferably it has about 92% to about 99% sequence identity with an amino acid sequence of the invention contained in the Sequence Listing; the polypeptide has an amino acid sequence essentially the same as an amino acid sequence of the invention contained in the Sequence Listing; the polypeptide is at least about 5, 10, 20, 50, 100, or 150 amino acid residues in length; the polypeptide includes at least about 5, preferably at least about 10, more preferably at least about 20, still more preferably at least about 50, 100, or 150 contiguous amino acid residues of the invention contained in the Sequence Listing. In yet another preferred embodiment, the amino acid sequence which differs in sequence identity by about 7% to about 8% from the S. epidermidis amino acid sequences of the invention contained in the Sequence Listing is also encompassed by the invention.

In preferred embodiments: the S. epidermidis polypeptide is encoded by a nucleic acid of the invention contained in the Sequence Listing, or by a nucleic acid having at least about 60%, 70%, 80%, 90%, 95%, 98%, or 99% homology with a nucleic acid of the invention contained in the Sequence Listing.

In a preferred embodiment, the subject S. epidermidis polypeptide differs in amino acid sequence at about 1, 2, 3, 5, 10 or more residues from a sequence of the invention contained in the Sequence Listing. The differences, however, are such that the S. epidermidis polypeptide exhibits an S. epidermidis biological activity, e.g., the S. epidermidis polypeptide retains a biological activity of a naturally occurring S. epidermidis enzyme.

In preferred embodiments, the polypeptide includes all or a fragment of an amino acid sequence of the invention contained in the Sequence Listing; fused, in reading frame, to additional amino acid residues, preferably to residues encoded by genomic DNA 5′ or 3′ to the genomic DNA which encodes a sequence of the invention contained in the Sequence Listing.

In yet other preferred embodiments, the S. epidermidis polypeptide is a recombinant fusion protein having a first S. epidermidis polypeptide portion and a second polypeptide portion, e.g., a second polypeptide portion having an amino acid sequence unrelated to S. epidermidis. The second polypeptide portion can be, e.g., any of glutathione-S-transferase, a DNA binding domain, or a polymerase activating domain. In preferred embodiment the fusion protein can be used in a two-hybrid assay.

Polypeptides of the invention include those which arise as a result of alternative transcription events, alternative RNA splicing events, and alternative translational and postranslational events.

In a preferred embodiment, the encoded S. epidermidis polypeptide differs (e.g., by amino acid substitution, addition or deletion of at least one amino acid residue) in amino acid sequence at about 1, 2, 3, 5, 10 or more residues, from a sequence of the invention contained in the Sequence Listing. The differences, however, are such that: the S. epidermidis encoded polypeptide exhibits an S. epidermidis biological activity, e.g., the encoded S. epidermidis enzyme retains a biological activity of a naturally occurring S. epidermidis.

In preferred embodiments, the encoded polypeptide includes all or a fragment of an amino acid sequence of the invention contained in the Sequence Listing; fused, in reading frame, to additional amino acid residues, preferably to residues encoded by genomic DNA 5′ or 3′ to the genomic DNA which encodes a sequence of the invention contained in the Sequence Listing.

The S. epidermidis strain, 18972, from which genomic sequences have been sequenced, has been deposited on Jul. 10, 1997, in the American Type Culture Collection and assigned the ATCC designation # 55998.

Included in the invention are: allelic variations; natural mutants; induced mutants; proteins encoded by DNA that hybridize under high or low stringency conditions to a nucleic acid which encodes a polypeptide of the invention contained in the Sequence Listing (for definitions of high and low stringency see Current Protocols in Molecular Biology, John Wiley & Sons, New York, 1989, 6.3.1–6.3.6, hereby incorporated by reference); and, polypeptides specifically bound by antisera to S. epidermidis polypeptides, especially by antisera to an active site or binding domain of S. epidermidis polypeptide. The invention also includes fragments, preferably biologically active fragments. These and other polypeptides are also referred to herein as S. epidermidis polypeptide analogs or variants.

The invention further provides nucleic acids, e.g., RNA or DNA, encoding a polypeptide of the invention. This includes double stranded nucleic acids as well as coding and antisense single strands.

In preferred embodiments, the subject S. epidermidis nucleic acid will include a transcriptional regulatory sequence, e.g., at least one of a transcriptional promoter or transcriptional enhancer sequence, operably linked to the S. epidermidis gene sequence, e.g., to render the S. epidermidis gene sequence suitable for expression in a recombinant host cell.

In yet a further preferred embodiment, the nucleic acid which encodes an S. epidermidis polypeptide of the invention, hybridizes under stringent conditions to a nucleic acid probe corresponding to at least about 8 consecutive nucleotides of the invention contained in the Sequence Listing; more preferably to at least about 12 consecutive nucleotides of the invention contained in the Sequence Listing; still more preferably to at least about 20 consecutive nucleotides of the invention contained in the Sequence Listing; most preferably to at least about 40 consecutive nucleotides of the invention contained in the Sequence Listing.

In another aspect, the invention provides a substantially pure nucleic acid having a nucleotide sequence which encodes an S. epidermidis polypeptide. In preferred embodiments: the encoded polypeptide has biological activity; the encoded polypeptide has an amino acid sequence at least about 60%, 70%, 80%, 90%, 95%, 98% or 99% homologous to an amino acid sequence of the invention contained in the Sequence Listing; the encoded polypeptide has an amino acid sequence essentially the same as an amino acid sequence of the invention contained in the Sequence Listing; the encoded polypeptide is at least about 5, 10, 20, 50, 100, or 150 amino acids in length; the encoded polypeptide comprises at least about 5, preferably at least about 10, more preferably at least about 20, still more preferably at least about 50, 100, or 150 contiguous amino acids of the invention contained in the Sequence Listing.

In another aspect, the invention encompasses: a vector including a nucleic acid which encodes an S. epidermidis polypeptide or an S. epidermidis polypeptide variant as described herein; a host cell transfected with the vector; and a method of producing a recombinant S. epidermidis polypeptide or S. epidermidis polypeptide variant; including culturing the cell, e.g., in a cell culture medium, and isolating an S. epidermidis or S. epidermidis polypeptide variant, e.g., from the cell or from the cell culture medium.

One embodiment of the invention is directed to substantially isolated nucleic acids. Nucleic acids of the invention include sequences comprising at least about 8 nucleotides in length, more preferably at least about 12 nucleotides in length, even more preferably at least about 15–20 nucleotides in length, that correspond to a subsequence of any one of SEQ ID NO: 1–SEQ ID NO: 3772 or complements thereof. Alternatively, the nucleic acids comprise sequences contained within any ORF (open reading frame), including a complete protein- coding sequence, of which any of SEQ ID NO: 1–SEQ ID NO: 3772 forms a part. The invention encompasses sequence-conservative variants and function-conservative variants of these sequences. The nucleic acids may be DNA, RNA, DNA/RNA duplexes, protein- nucleic acid (PNA), or derivatives thereof.

In another aspect, the invention features a purified recombinant nucleic acid having at least about 50%, 60%, 70%, 80%, 90%, 95%, 98%, or 99% homology with a sequence of the invention contained in the Sequence Listing.

The invention also encompasses recombinant DNA (including DNA cloning and expression vectors) comprising these S. epidermidis-derived sequences; host cells comprising such DNA, including fungal, bacterial, yeast, plant, insect, and mammalian host cells; and methods for producing expression products comprising RNA and polypeptides encoded by the S. epidermidis sequences. These methods are carried out by incubating a host cell comprising an S. epidermidis-derived nucleic acid sequence under conditions in which the sequence is expressed. The host cell may be native or recombinant. The polypeptides can be obtained by (a) harvesting the incubated cells to produce a cell fraction and a medium fraction; and (b) recovering the S. epidermidis polypeptide from the cell fraction, the medium fraction, or both. The polypeptides can also be made by in vitro translation.

In another aspect, the invention features nucleic acids capable of binding mRNA of S. epidermidis. Such nucleic acid is capable of acting as antisense nucleic acid to control the translation of mRNA of S. epidermidis. A further aspect features a nucleic acid which is capable of binding specifically to an S. epidermidis nucleic acid. These nucleic acids are also referred to herein as complements and have utility as probes and as capture reagents.

In another aspect, the invention features an expression system comprising an open reading frame corresponding to S. epidermidis nucleic acid. The nucleic acid further comprises a control sequence compatible with an intended host. The expression system is useful for making polypeptides corresponding to S. epidermidis nucleic acid.

In another aspect, the invention encompasses: a vector including a nucleic acid which encodes an S. epidermidis polypeptide or an S. epidermidis polypeptide variant as described herein; a host cell transfected with the vector; and a method of producing a recombinant S. epidermidis polypeptide or S. epidermidis polypeptide variant; including culturing the cell, e.g., in a cell culture medium, and isolating the S. epidermidis or S. epidermidis polypeptide variant, e.g., from the cell or from the cell culture medium.

In yet another embodiment of the invention encompasses reagents for detecting bacterial infection, including S. epidermidis infection, which comprise at least one S. epidermidis-derived nucleic acid defined by any one of SEQ ID NO: 1–SEQ ID NO: 3772, or sequence-conservative or function-conservative variants thereof. Alternatively, the diagnostic reagents comprise nucleotide sequences that are contained within any open reading frames (ORFs), including preferably complete protein-coding sequences, contained within any of SEQ ID NO: 1–SEQ ID NO: 3772, or polypeptide sequences contained within any of SEQ ID NO: 3773–SEQ ID NO: 7544, or polypeptides of which any of the above sequences forms a part, or antibodies directed against any of the above peptide sequences or function- conservative variants and/or fragments thereof.

The invention further provides antibodies, preferably monoclonal antibodies, which specifically bind to the polypeptides of the invention. Methods are also provided for producing antibodies in a host animal. The methods of the invention comprise immunizing an animal with at least one S. epidermidis-derived immunogenic component, wherein the immunogenic component comprises one or more of the polypeptides encoded by any one of SEQ ID NO: 1–SEQ ID NO: 3772 or sequence-conservative or function-conservative variants thereof; or polypeptides that are contained within any ORFs, including complete protein-coding sequences, of which any of SEQ ID NO: 1–SEQ ID NO: 3772 forms a part; or polypeptide sequences contained within any of SEQ ID NO: 3773–SEQ ID NO: 7544; or polypeptides of which any of SEQ ID NO: 3773–SEQ ID NO: 7544 forms a part. Host animals include any warm blooded animal, including without limitation mammals and birds. Such antibodies have utility as reagents for immunoassays to evaluate the abundance and distribution of S. epidermidis-specific antigens.

In yet another aspect, the invention provides diagnostic methods for detecting S. epidermidis antigenic components or anti-S. epidermidis antibodies in a sample. S. epidermidis antigenic components may be detected by known processes, including but not limited to detection by a process comprising: (i) contacting a sample suspected to contain a bacterial antigenic component with a bacterial-specific antibody, under conditions in which a stable antigen-antibody complex can form between the antibody and bacterial antigenic components in the sample; and (ii) detecting any antigen-antibody complex formed in step (i), wherein detection of an antigen-antibody complex indicates the presence of at least one bacterial antigenic component in the sample. In different embodiments of this method, the antibodies used are directed against a sequence encoded by any of SEQ ID NO: 1–SEQ ID NO: 3772 or sequence-conservative or function-conservative variants thereof, or against a polypeptide sequence contained in any of SEQ ID NO: 3773–SEQ ID NO: 7544 or function- conservative variants thereof.

In yet another aspect, the invention provides a method for detecting antibacterial- specific antibodies in a sample, which comprises: (i) contacting a sample suspected to contain antibacterial-specific antibodies with an S. epidermidis antigenic component, under conditions in which a stable antigen-antibody complex can form between the S. epidermidis antigenic component and antibacterial antibodies in the sample; and (ii) detecting any antigen- antibody complex formed in step (i), wherein detection of an antigen-antibody complex indicates the presence of antibacterial antibodies in the sample. In different embodiments of this method, the antigenic component is encoded by a sequence contained in any of SEQ ID NO: 1–SEQ ID NO: 3772 or sequence-conservative and function-conservative variants thereof, or is a polypeptide sequence contained in any of SEQ ID NO: 3773–SEQ ID NO: 7544 or function-conservative variants thereof.

In another aspect, the invention features a method of generating vaccines for immunizing an individual against S. epidermidis The method includes: immunizing a subject with an S. epidermidis polypeptide, e.g., a surface or secreted polypeptide, or a combination of such peptides or active portion(s) thereof, and a pharmaceutically acceptable carrier. Such vaccines have therapeutic and prophylactic utilities.

In another aspect, the invention features a method of evaluating a compound, e.g., a polypeptide, e.g., a fragment of a host cell polypeptide, for the ability to bind an S. epidermidis polypeptide. The method includes contacting the compound to be evaluated with an S. epidermidis polypeptide and determining if the compound binds or otherwise interacts with the S. epidermidis polypeptide. Compounds which bind or otherwise interact with S. epidermidis polypeptides are candidates as modulators, including activators and inhibitors, of the bacterial life cycle. These assays can be performed in vitro or in vivo.

In another aspect, the invention features a method of evaluating a compound, e.g., a polypeptide, e.g., a fragment of a host cell polypeptide, for the ability to bind an S. epidermidis nucleic acid, e.g., DNA or RNA. The method includes contacting the compound to be evaluated with an S. epidermidis nucleic acid and determining if the compound binds or otherwise interacts with the S. epidermidis nucleic acid. Compounds which bind S. epidermidis are candidates as modultors, including activators and inhibitors, of the bacterial life cycle. These assays can be performed in vitro or in vivo.

A particularly preferred embodiment of the invention is directed to a method of screening test compounds for anti-bacterial activity, which method comprises: selecting as a target a bacterial specific sequence, which sequence is essential to the viability of a bacterial species; contacting a test compound with said target sequence; and selecting those test compounds which bind to said target sequence as potential anti-bacterial candidates. In one embodiment, the target sequence selected is specific to a single species, or even a single strain, such as, for example, the strain S. epidermidis 18972. In a second embodiment, the target sequence is common to at least two species of bacteria. In a third embodiment, the target sequence is common to a family of bacteria. The target sequence may be a nucleic acid sequence or a polypeptide sequence. Methods employing sequences common to more than one species of microorganism may be used to screen candidates for broad spectrum anti- bacterial activity.

The invention also provides methods for preventing or treating disease caused by certain bacteria, including S. epidermidis, which are carried out by administering to an animal in need of such treatment, in particular a warm-blooded vertebrate, including but not limited to birds and mammals, a compound that specifically inhibits or interferes with the function of a bacterial polypeptide or nucleic acid. In a particularly preferred embodiment, the mammal to be treated is human.

DETAILED DESCRIPTION OF THE INVENTION

The sequences of the present invention include the specific nucleic acid and amino acid sequences set forth in the Sequence Listing that forms a part of the present specification, and which are designated SEQ ID NO: 1–SEQ ID NO: 7544. Use of the terms “SEQ ID NO: 1–SEQ ID NO: 3772”, “SEQ ID NO: 3773–SEQ ID NO: 7544, “the sequences depicted in Table 2”, etc., is intended, for convenience, to refer to each individual SEQ ID NO individually, and is not intended to refer to the genus of these sequences unless such reference would be indicated. In other words, it is a shorthand for listing all of these sequences individually. The invention encompasses each sequence individually, as well as any combination thereof.

Definitions

“Nucleic acid” or “polynucleotide” as used herein refers to purine- and pyrimidine- containing polymers of any length, either polyribonucleotides or polydeoxyribonucleotides or mixed polyribo-polydeoxyribo nucleotides. This includes single- and double-stranded molecules, i.e., DNA—DNA, DNA-RNA and RNA—RNA hybrids, as well as “protein nucleic acids” (PNA) formed by conjugating bases to an amino acid backbone. This also includes nucleic acids containing modified bases.

A nucleic acid or polypeptide sequence that is “derived from” a designated sequence refers to a sequence that corresponds to a region of the designated sequence. For nucleic acid sequences, this encompasses sequences that are homologous or complementary to the sequence, as well as “sequence-conservative variants” and “function-conservative variants.” For polypeptide sequences, this encompasses “function-conservative variants.” Sequence- conservative variants are those in which a change of one or more nucleotides in a given codon position results in no alteration in the amino acid encoded at that position. Function- conservative variants are those in which a given amino acid residue in a polypeptide has been changed without altering the overall conformation and function of the native polypeptide, including, but not limited to, replacement of an amino acid with one having similar physico- chemical properties (such as, for example, acidic, basic, hydrophobic, and the like). “Function-conservative” variants also include any polypeptides that have the ability to elicit antibodies specific to a designated polypeptide.

An “S. epidermidis-derived” nucleic acid or polypeptide sequence may or may not be present in other bacterial species, and may or may not be present in all S. epidermidis strains. This term is intended to refer to the source from which the sequence was originally isolated. Thus, an S. epidermidis-derived polypeptide, as used herein, may be used, e.g., as a target to screen for a broad spectrum antibacterial agent, to search for homologous proteins in other species of bacteria or in eukaryotic organisms such as bacteria humans, etc.

A purified or isolated polypeptide or a substantially pure preparation of a polypeptide are used interchangeably herein and, as used herein, mean a polypeptide that has been separated from other proteins, lipids, and nucleic acids with which it naturally occurs. Preferably, the polypeptide is also separated from substances, e.g., antibodies or gel matrix, e.g., polyacrylamide, which are used to purify it. Preferably, the polypeptide constitutes at least about 10, 20, 50 70, 80 or 95% dry weight of the purified preparation. Preferably, the preparation contains sufficient polypeptide to allow protein sequencing; at least about 1, 10, or preferably 100 mg of polypeptide.

A purified preparation of cells refers to, in the case of plant or animal cells, an in vitro preparation of cells and not an entire intact plant or animal. In the case of cultured cells or microbial cells, it consists of a preparation of at least about 10%, more preferably at least about 50%, of the subject cells.

A purified or isolated or a substantially pure nucleic acid, e.g., a substantially pure DNA, (are terms used interchangeably herein) is a nucleic acid which is one or both of the following: not immediately contiguous with both of the coding sequences with which it is immediately contiguous (i.e., one at the 5′ end and one at the 3′ end) in the naturally-occurring genome and plasmids of the organism from which the nucleic acid is derived; or which is substantially free of a nucleic acid with which it occurs in the organism from which the nucleic acid is derived. The term includes, for example, a recombinant DNA which is incorporated into a vector, e.g., into an autonomously replicating plasmid or virus, or into the genomic DNA of a prokaryote or eukaryote, or which exists as a separate molecule (e.g., a cDNA or a genomic DNA fragment produced by PCR or restriction endonuclease treatment) independent of other DNA sequences. Substantially pure DNA also includes a recombinant DNA which is part of a hybrid gene encoding additional S. epidermidis DNA sequence.

A “contig” as used herein is a nucleic acid representing a continuous stretch of genomic sequence of an organism.

An “open reading frame”, also referred to herein as ORF, is a region of nucleic acid which encodes a polypeptide. This region may represent a portion of a coding sequence or a total sequence and can be determined from a stop to stop codon or from a start to stop codon.

As used herein, a “coding sequence” is a nucleic acid which is transcribed into messenger RNA and/or translated into a polypeptide when placed under the control of appropriate regulatory sequences. The boundaries of the coding sequence are determined by a translation start codon at the five prime terminus and a translation stop code at the three prime terminus. A coding sequence can include but is not limited to messenger RNA, synthetic DNA, and recombinant nucleic acid sequences.

A “complement” of a nucleic acid as used herein refers to an anti-parallel or antisense sequence that participates in Watson-Crick base-pairing with the original sequence.

A “gene product” is a protein or structural RNA which is specifically encoded by a gene.

As used herein, the term “probe” refers to a nucleic acid, peptide or other chemical entity which specifically binds to a molecule of interest. Probes are often associated with or capable of associating with a label. A label is a chemical moiety capable of detection. Typical labels comprise dyes, radioisotopes, luminescent and chemiluminescent moieties, fluorophores, enzymes, precipitating agents, amplification sequences, and the like. Similarly, a nucleic acid, peptide or other chemical entity which specifically binds to a molecule of interest and immobilizes such molecule is referred herein as a “capture ligand”. Capture ligands are typically associated with or capable of associating with a support such as nitro- cellulose, glass, nylon membranes, beads, particles and the like. The specificity of hybridization is dependent on conditions such as the base pair composition of the nucleotides, and the temperature and salt concentration of the reaction. These conditions are readily discernable to one of ordinary skill in the art using routine experimentation.

“Homologous” refers to the sequence similarity or sequence identity between two polypeptides or between two nucleic acid molecules. When a position in both of the two compared sequences is occupied by the same base or amino acid monomer subunit, e.g., if a position in each of two DNA molecules is occupied by adenine, then the molecules are homologous at that position. The percent of homology between two sequences is a function of the number of matching or homologous positions shared by the two sequences divided by the number of positions compared×100. For example, if 6 of 10 of the positions in two sequences are matched or homologous then the two sequences are 60% homologous. By way of example, the DNA sequences ATTGCC and TATGGC share 50% homology. Generally, a comparison is made when two sequences are aligned to give maximum homology.

Nucleic acids are hybridizable to each other when at least one strand of a nucleic acid can anneal to the other nucleic acid under defined stringency conditions. Stringency of hybridization is determined by: (a) the temperature at which hybridization and/or washing is performed; and (b) the ionic strength and polarity of the hybridization and washing solutions. Hybridization requires that the two nucleic acids contain complementary sequences; depending on the stringency of hybridization, however, mismatches may be tolerated. Typically, hybridization of two sequences at high stringency (such as, for example, in a solution of 0.5×SSC, at 65° C.) requires that the sequences be essentially completely homologous. Conditions of intermediate stringency (such as, for example, 2×SSC at 65° C.) and low stringency (such as, for example 2×SSC at 55° C.) require correspondingly less overall complementarity between the hybridizing sequences. (1×SSC is 0.15 M NaCl, 0.015 M Na citrate).

The terms peptides, proteins, and polypeptides are used interchangeably herein.

As used herein, the term “surface protein” refers to all surface accessible proteins, e.g. inner and outer membrane proteins, proteins adhering to the cell wall, and secreted proteins.

A polypeptide has S. epidermidis biological activity if it has one, two or preferably more of the following properties: (1) if when expressed in the course of an S. epidermidis infection, it can promote, or mediate the attachment of S. epidermidis to a cell; (2) it has an enzymatic activity, structural or regulatory function characteristic of an S. epidermidis protein; (3) the gene which encodes it can rescue a lethal mutation in an S. epidermidis gene. A polypeptide has biological activity if it is an antagonist, agonist, or super-agonist of a polypeptide having one of the above-listed properties.

A biologically active fragment or analog is one having an in vivo or in vitro activity which is characteristic of the S. epidermidis polypeptides of the invention contained in the Sequence Listing, or of other naturally occurring S. epidermidis polypeptides, e.g., one or more of the biological activities described herein. Especially preferred are fragments which exist in vivo, e.g., fragments which arise from post transcriptional processing or which arise from translation of alternatively spliced RNA's. Fragments include those expressed in native or endogenous cells as well as those made in expression systems, e.g., in CHO (Chinese Hamster Ovary) cells. Because peptides such as S. epidermidis polypeptides often exhibit a range of physiological properties and because such properties may be attributable to different portions of the molecule, a useful S. epidermidis fragment or S. epidermidis analog is one which exhibits a biological activity in any biological assay for S. epidermidis activity. The fragment or analog possesses about 10%, preferably about 40%, more preferably about 60%, 70%, 80% or 90% or greater of the activity of S. epidermidis, in any in vivo or in vitro assay.

Analogs can differ from naturally occurring S. epidermidis polypeptides in amino acid sequence or in ways that do not involve sequence, or both. Non-sequence modifications include changes in acetylation, methylation, phosphorylation, carboxylation, or glycosylation. Preferred analogs include S. epidermidis polypeptides (or biologically active fragments thereof) whose sequences differ from the wild-type sequence by one or more conservative amino acid substitutions or by one or more non-conservative amino acid substitutions, deletions, or insertions which do not substantially diminish the biological activity of the S. epidermidis polypeptide. Conservative substitutions typically include the substitution of one amino acid for another with similar characteristics, e.g., substitutions within the following groups: valine, glycine; glycine, alanine; valine, isoleucine, leucine; aspartic acid, glutamic acid; asparagine, glutamine; serine, threonine; lysine, arginine; and phenylalanine, tyrosine. Other conservative substitutions can be made in view of the table below.

TABLE 1 CONSERVATIVE AMINO ACID REPLACEMENTS For Amino Acid Code Replace with any of Alanine A D-Ala, Gly, beta-Ala, L-Cys, D-Cys Arginine R D-Arg, Lys, D-Lys, homo-Arg, D-homo-Arg, Met, Ile, D-Met, D-Ile, Orn, D-Orn Asparagine N D-Asn, Asp, D-Asp, Glu, D-Glu, Gln, D-Gln Aspartic Acid D D-Asp, D-Asn, Asn, Glu, D-Glu, GIn, D-Gln Cysteine C D-Cys, S-Me-Cys, Met, D-Met, Thr, D-Thr Glutamine Q D-Gln, Asn, D-Asn, Glu, D-Glu, Asp, D-Asp Glutamic Acid E D-Glu, D-Asp, Asp, Asn, D-Asn, Gln, D-Gln Glycine G Ala, D-Ala, Pro, D-Pro, β-Ala, Acp Isoleucine I D-Ile, Val, D-Val, Leu, D-Leu, Met, D-Met Leucine L D-Leu, Val, D-Val, Leu, D-Leu, Met, D-Met Lysine K D-Lys, Arg, D-Arg, homo-Arg, D-homo-Arg, Met, D-Met, Ile, D-Ile, Orn, D-Orn Methionine M D-Met, S-Me-Cys, Ile, D-Ile, Leu, D-Leu, Val, D-Val Phenylalanine F D-Phe, Tyr, D-Thr, L-Dopa, His, D-His, Trp, D-Trp, Trans-3, 4, or 5-phenylproline, cis-3, 4, or 5-phenylproline Proline P D-Pro, L-I-thioazolidine-4-carboxylic acid, D- or L-1-oxazolidine-4-carboxylic acid Serine S D-Ser, Thr, D-Thr, allo-Thr, Met, D-Met, Met(O), D-Met(O), L-Cys, D-Cys Threonine T D-Thr, Ser, D-Ser, allo-Thr, Met, D-Met, Met(O), D-Met(O), Val, D-Val Tyrosine Y D-Tyr, Phe, D-Phe, L-Dopa, His, D-His Valine V D-Val, Leu, D-Leu, Ile, D-Ile, Met, D-Met

Other analogs within the invention are those with modifications which increase peptide stability; such analogs may contain, for example, one or more non-peptide bonds (which replace the peptide bonds) in the peptide sequence. Also included are: analogs that include residues other than naturally occurring L-amino acids, e.g., D-amino acids or non- naturally occurring or synthetic amino acids, e.g., β or γ amino acids; and cyclic analogs.

As used herein, the term “fragment”, as applied to an S. epidermidis analog, will ordinarily be at least about 20 residues, more typically at least about 40 residues, preferably at least about 60 residues in length. Fragments of S. epidermidis polypeptides can be generated by methods known to those skilled in the art. The ability of an Staphylococcus fragment to exhibit a biological activity of S. epidermidis polypeptide can be assessed by methods known to those skilled in the art as described herein. Also included are S. epidermidis polypeptides containing residues that are not required for biological activity of the peptide or that result from alternative mRNA splicing or alternative protein processing events.

An “immunogenic component” as used herein is a moiety, such as an S. epidermidis polypeptide, analog or fragment thereof, that is capable of eliciting a humoral and/or cellular immune response in a host animal.

An “antigenic component” as used herein is a moiety, such as an S. epidermidis polypeptide, analog or fragment thereof, that is capable of binding to a specific antibody with sufficiently high affinity to form a detectable antigen-antibody complex.

The term “antibody” as used herein is intended to include fragments thereof which are specifically reactive with S. epidermidis polypeptides.

As used herein, the term “cell-specific promoter” means a DNA sequence that serves as a promoter, i.e., regulates expression of a selected DNA sequence operably linked to the promoter, and which effects expression of the selected DNA sequence in specific cells of a tissue. The term also covers so-called “leaky” promoters, which regulate expression of a selected DNA primarily in one tissue, but cause expression in other tissues as well.

Misexpression, as used herein, refers to a non-wild type pattern of gene expression. It includes: expression at non-wild type levels, i.e., over or under expression; a pattern of expression that differs from wild type in terms of the time or stage at which the gene is expressed, e.g., increased or decreased expression (as compared with wild type) at a predetermined developmental period or stage; a pattern of expression that differs from wild type in terms of increased expression (as compared with wild type) in a predetermined cell type or tissue type; a pattern of expression that differs from wild type in terms of the splicing size, amino acid sequence, post-translational modification, or biological activity of the expressed polypeptide; a pattern of expression that differs from wild type in terms of the effect of an environmental stimulus or extracellular stimulus on expression of the gene, e.g., a pattern of increased or decreased expression (as compared with wild type) in the presence of an increase or decrease in the strength of the stimulus.

As used herein, “host cells” and other such terms denoting microorganisms or higher eukaryotic cell lines cultured as unicellular entities refers to cells which can become or have been used as recipients for a recombinant vector or other transfer DNA, and include the progeny of the original cell which has been transfected. It is understood by individuals skilled in the art that the progeny of a single parental cell may not necessarily be completely identical in genomic or total DNA compliment to the original parent, due to accident or deliberate mutation.

As used herein, the term “control sequence” refers to a nucleic acid having a base sequence which is recognized by the host organism to effect the expression of encoded sequences to which they are ligated. The nature of such control sequences differs depending upon the host organism; in prokaryotes, such control sequences generally include a promoter, ribosomal binding site, terminators, and in some cases operators; in eukaryotes, generally such control sequences include promoters, terminators and in some instances, enhancers. The term control sequence is intended to include at a minimum, all components whose presence is necessary for expression, and may also include additional components whose presence is advantageous, for example, leader sequences.

As used herein, the term “operably linked” refers to sequences joined or ligated to function in their intended manner. For example, a control sequence is operably linked to coding sequence by ligation in such a way that expression of the coding sequence is achieved under conditions compatible with the control sequence and host cell.

The “metabolism” of a substance, as used herein, means any aspect of the expression, function, action, or regulation of the substance. The metabolism of a substance includes modifications, e.g., covalent or non-covalent modifications of the substance. The metabolism of a substance includes modifications, e.g., covalent or non-covalent modification, the substance induces in other substances. The metabolism of a substance also includes changes in the distribution of the substance. The metabolism of a substance includes changes the substance induces in the distribution of other substances.

A “sample” as used herein refers to a biological sample, such as, for example, tissue or fluid isloated from an individual (including without limitation plasma, serum, cerebrospinal fluid, lymph, tears, saliva and tissue sections) or from in vitro cell culture constituents, as well as samples from the environment.

Technical and scientific terms used herein have the meanings commonly understood by one of ordinary skill in the art to which the present invention pertains, unless otherwise defined. Reference is made herein to various methodologies known to those of skill in the art. Publications and other materials setting forth such known methodologies to which reference is made are incorporated herein by reference in their entireties as though set forth in full. The practice of the invention will employ, unless otherwise indicated, conventional techniques of chemistry, molecular biology, microbiology, recombinant DNA, and immunology, which are within the skill of the art. Such techniques are explained fully in the literature. See e.g., Sambrook, Fritsch, and Maniatis, Molecular Cloning; Laboratory Manual 2nd ed. (1989); DNA Cloning, Volumes I and II (D. N Glover ed. 1985); Oligonucleotide Synthesis (M. J. Gait ed, 1984); Nucleic Acid Hybridization (B. D. Hames & S. J. Higgins eds. 1984); the series, Methods in Enzymoloqy (Academic Press, Inc.), particularly Vol. 154 and Vol. 155 (Wu and Grossman, eds.); PCR-A Practical Approach (McPherson, Quirke, and Taylor, eds., 1991); Immunology, 2d Edition, 1989, Roitt et al., C. V. Mosby Company, and New York; Advanced Immunology, 2d Edition, 1991, Male et al., Grower Medical Publishing, New York; DNA Cloning: A Practical Approach, Volumes I and II, 1985 (D. N. Glover ed.); Oligonucleotide Synthesis, 1984, (M. L. Gait ed); Transcription and Translation, 1984 (Hames and Higgins eds.); Animal Cell Culture, 1986 (R. I. Freshney ed.); Immobilized Cells and Enzymes, 1986 (IRL Press); Perbal, 1984, A Practical Guide to Molecular Cloning; Gene Transfer Vectors for Mammalian Cells, 1987 (J. H. Miller and M. P. Calos eds., Cold Spring Harbor Laboratory); Martin J. Bishop, ed., Guide to Human Genome Computing, 2d Edition, Academic Press, San Diego, Calif. (1998); and Leonard F. Peruski, Jr., and Anne Harwood Peruski, The Internet and the New Biology: Tools for Genomic and Molecular Research, American Society for Microbiology, Washington, D.C. (1997).

Any suitable materials and/or methods known to those of skill can be utilized in carrying out the present invention; however, preferred materials and/or methods are described. Materials, reagents and the like to which reference is made in the following description and examples are obtainable from commercial sources, unless otherwise noted.

S. epidermidis Genomic Sequence

This invention provides nucleotide sequences of the genome of S. epidermidis which thus comprises a DNA sequence library of S. epidermidis genomic DNA. The detailed description that follows provides nucleotide sequences of S. epidermidis, and also describes how the sequences were obtained and how ORFs and protein-coding sequences were identified. Also described are compositions and methods of using the disclosed S. epidermidis sequences in methods including diagnostic and therapeutic applications. Furthermore, the library can be used as a database for identification and comparison of medically important sequences in this and other strains of S. epidermidis.

To determine the genomic sequence of S. epidermidis, DNA from strain 18972 of S. epidermidis was isolated and a library of DNA fragments were transformed into DH5α cells. DNA sequencing was achieved using established ABI sequencing methods on ABI377 automated DNA sequencers. The cloning and sequencing procedures are described in more detail in the Exemplification.

Individual sequence reads were assembled using PHRAP (P. Green, Abstracts of DOE Human Genome Program Contractor-Grantee Workshop V, January 1996, p. 157). The average contig length was about 3–4 kb.

All subsequent steps were based on sequencing by ABI377 automated DNA sequencing methods. The cloning and sequencing procedures are described in more detail in the Exemplification.

A variety of approaches may be used to order the contigs so as to obtain a continuous sequence representing the entire S. epidermidis genome. Synthetic oligonucleotides are designed that are complementary to sequences at the end of each contig. These oligonucleotides may be hybridized to libaries of S. epidermidis genomic DNA in, for example, lambda phage vectors or plasmid vectors to identify clones that contain sequences corresponding to the junctional regions between individual contigs. Such clones are then used to isolate template DNA and the same oligonucleotides are used as primers in polymerase chain reaction (PCR) to amplify junctional fragments, the nucleotide sequence of which is then determined.

The S. epidermidis sequences were analyzed for the presence of open reading frames (ORFs) comprising at least 180 nucleotides. As a result of the analysis of ORFs based on stop-to-stop codon reads, it should be understood that these ORFs may not correspond to the ORF of a naturally-occurring S. epidermidis polypeptide. These ORFs may contain start codons which indicate the initiation of protein synthesis of a naturally-occurring S. epidermidis polypeptide. Such start codons within the ORFs provided herein were identified by those of ordinary skill in the relevant art, and the resulting ORF and the encoded S. epidermidis polypeptide is within the scope of this invention. For example, within the ORFs a codon such as AUG or GUG (encoding methionine or valine) which is part of the initiation signal for protein synthesis were identified and the portion of an ORF to corresponding to a naturally-occurring S. epidermidis polypeptide was recognized. The predicted coding regions were defined by evaluating the coding potential of such sequences with the program GENEMARK™ (Borodovsky and McIninch, 1993, Comp. 17:123).

Each predicted ORF amino acid sequence was compared with all sequences found in current GENBANK, SWISS-PROT, and PIR databases using the BLAST algorithm. BLAST identifies local alignments occurring by chance between the ORF sequence and the sequence in the databank (Altschal et al., 1990, L Mol. Biol. 215:403–410). Homologous ORFs (probabilities less than 10⁻⁵ by chance) and ORF's that are probably non-homologous (probabilities greater than 10⁻⁵ by chance) but have good codon usage were identified. Both homologous, sequences and non-homologous sequences with good codon usage, are likely to encode proteins and are encompassed by the invention.

S. epidermidis Plasmid Sequences

This invention also provides nucleotide sequences of two naturally occurs plasmids which thus comprises a DNA sequence library of S. epidermidis plasmid DNA. One plasmid disclosed is approximately 39 Kb and nucleic acid sequence is contained within SEQ ID NO: 3703–SEQ ID NO: 3764. The other plasmid is approximately 2.9 Kb contained within SEQ ID NO: 3765–SEQ ID NO: 3772. The detailed description that follows provides nucleotide sequences of S. epidermidis, and also describes how the sequences were obtained and how ORFs and protein-coding sequences were identified. Also described are compositions and methods of using the disclosed S. epidermidis sequences in methods including diagnostic and therapeutic applications. The plasmid sequences can also be used as vectors and gene expression. Furthermore, the plasmid library can be used as a database for identification and comparison of medically important sequences in this and other strains of S. epidermidis.

Similar methods were used to determine to plasmid sequences of S. epidermidis as described above in determining the genomic sequence. A more detailed description of the methods are in the Exemplification.

S. epidermidis Nucleic Acids

The present invention provides a library of S. epidermidis-derived nucleic acid sequences. The libraries provide probes, primers, and markers which are used as markers in epidemiological studies. The present invention also provides a library of S. epidermidis-derived nucleic acid sequences which comprise or encode targets for therapeutic drugs.

The nucleic acids of this invention may be obtained directly from the DNA of the above referenced S. epidermidis strain by using the polymerase chain reaction (PCR). See “PCR, A Practical Approach” (McPherson, Quirke, and Taylor, eds., IRL Press, Oxford, UK, 1991) for details about the PCR. High fidelity PCR is used to ensure a faithful DNA copy prior to expression. In addition, the authenticity of amplified products is verified by conventional sequencing methods. Clones carrying the desired sequences described in this invention may also be obtained by screening the libraries by means of the PCR or by hybridization of synthetic oligonucleotide probes to filter lifts of the library colonies or plaques as known in the art (see, e.g., Sambrook et al., Molecular Cloning, A Laboratory Manual 2nd edition, 1989, Cold Spring Harbor Press, NY).

It is also possible to obtain nucleic acids encoding S. epidermidis polypeptides from a cDNA library in accordance with protocols herein described. A cDNA encoding an S. epidermidis polypeptide can be obtained by isolating total mRNA from an appropriate strain. Double stranded cDNAs can then be prepared from the total mRNA. Subsequently, the cDNAs can be inserted into a suitable plasmid or viral (e.g., bacteriophage) vector using any one of a number of known techniques. Genes encoding S. epidermidis polypeptides can also be cloned using established polymerase chain reaction techniques in accordance with the nucleotide sequence information provided by the invention. The nucleic acids of the invention can be DNA or RNA. Preferred nucleic acids of the invention are contained in the Sequence Listing.

The nucleic acids of the invention can also be chemically synthesized using standard techniques. Various methods of chemically synthesizing polydeoxynucleotides are known, including solid-phase synthesis which, like peptide synthesis, has been fully automated in commercially available DNA synthesizers (See e.g., Itakura et al. U.S. Pat. No. 4,598,049; Caruthers et al. U.S. Pat. No. 4,458,066; and Itakura U.S. Pat. Nos. 4,401,796 and 4,373,071, incorporated by reference herein).

In another example, DNA can be chemically synthesized using, e.g., the phosphoramidite solid support method of Matteucci et al., 1981, J. Am. Chem. Soc. 103:3185, the method of Yoo et al., 1989, J. Biol. Chem. 764:17078, or other well known methods. This can be done by sequentially linking a series of oligonucleotide cassettes comprising pairs of synthetic oligonucleotides, as described below.

Nucleic acids isolated or synthesized in accordance with features of the present invention are useful, by way of example, without limitation, as probes, primers, capture ligands, antisense genes and for developing expression systems for the synthesis of proteins and peptides corresponding to such sequences. As probes, primers, capture ligands and antisense agents, the nucleic acid normally consists of all or part (approximately twenty or more nucleotides for specificity as well as the ability to form stable hybridization products) of the nucleic acids of the invention contained in the Sequence Listing. These uses are described in further detail below.

Probes

A nucleic acid isolated or synthesized in accordance with the sequence of the invention contained in the Sequence Listing can be used as a probe to specifically detect S. epidermidis. With the sequence information set forth in the present application, sequences of twenty or more nucleotides are identified which provide the desired inclusivity and exclusivity with respect to S. epidermidis, and extraneous nucleic acids likely to be encountered during hybridization conditions. More preferably, the sequence will comprise at least about twenty to thirty nucleotides to convey stability to the hybridization product formed between the probe and the intended target molecules.

Sequences larger than 1000 nucleotides in length are difficult to synthesize but can be generated by recombinant DNA techniques. Individuals skilled in the art will readily recognize that the nucleic acids, for use as probes, can be provided with a label to facilitate detection of a hybridization product.

Nucleic acid isolated and synthesized in accordance with the sequence of the invention contained in the Sequence Listing can also be useful as probes to detect homologous regions (especially homologous genes) of other Staphylococcus species using appropriate stringency hybridization conditions as described herein.

Capture Ligand

For use as a capture ligand, the nucleic acid selected in the manner described above with respect to probes, can be readily associated with a support. The manner in which nucleic acid is associated with supports is well known. Nucleic acid having twenty or more nucleotides in a sequence of the invention contained in the Sequence Listing have utility to separate S. epidermidis nucleic acid from one strain from the nucleic acid of other another strain as well as from other organisms. Nucleic acid having twenty or more nucleotides in a sequence of the invention contained in the Sequence Listing can also have utility to separate other Staphylococcus species from each other and from other organisms. Preferably, the sequence will comprise at least about twenty nucleotides to convey stability to the hybridization product formed between the probe and the intended target molecules. Sequences larger than 1000 nucleotides in length are difficult to synthesize but can be generated by recombinant DNA techniques.

Primers

Nucleic acid isolated or synthesized in accordance with the sequences described herein have utility as primers for the amplification of S. epidermidis nucleic acid. These nucleic acids may also have utility as primers for the amplification of nucleic acids in other Staphylococcus species. With respect to polymerase chain reaction (PCR) techniques, nucleic acid sequences of ≧10–15 nucleotides of the invention contained in the Sequence Listing have utility in conjunction with suitable enzymes and reagents to create copies of S. epidermidis nucleic acid. More preferably, the sequence will comprise twenty or more nucleotides to convey stability to the hybridization product formed between the primer and the intended target molecules. Binding conditions of primers greater than 100 nucleotides are more difficult to control to obtain specificity. High fidelity PCR can be used to ensure a faithful DNA copy prior to expression. In addition, amplified products can be checked by conventional sequencing methods.

The copies can be used in diagnostic assays to detect specific sequences, including genes from S. epidermidis and/or other Staphylococcus species. The copies can also be incorporated into cloning and expression vectors to generate polypeptides corresponding to the nucleic acid synthesized by PCR, as is described in greater detail herein.

The nucleic acids of the present invention find use as templates for the recombinant production of S. epidermidis-derived peptides or polypeptides.

Antisense

Nucleic acid or nucleic acid-hybridizing derivatives isolated or synthesized in accordance with the sequences described herein have utility as antisense agents to prevent the expression of S. epidermidis genes. These sequences also have utility as antisense agents to prevent expression of genes of other Staphylococcus species.

In one embodiment, nucleic acid or derivatives corresponding to S. epidermidis nucleic acids is loaded into a suitable carrier such as a liposome or bacteriophage for introduction into bacterial cells. For example, a nucleic acid having twenty or more nucleotides is capable of binding to bacteria nucleic acid or bacteria messenger RNA. Preferably, the antisense nucleic acid is comprised of 20 or more nucleotides to provide necessary stability of a hybridization product of non-naturally occurring nucleic acid and bacterial nucleic acid and/or bacterial messenger RNA. Nucleic acid having a sequence greater than 1000 nucleotides in length is difficult to synthesize but can be generated by recombinant DNA techniques. Methods for loading antisense nucleic acid in liposomes is known in the art as exemplified by U.S. Pat. No. 4,241,046 issued Dec. 23, 1980 to Papahadjopoulos et al.

The present invention encompasses isolated polypeptides and nucleic acids derived from S. epidermidis that are useful as reagents for diagnosis of bacterial infection, components of effective anti-bacterial vaccines, and/or as targets for anti-bacterial drugs, including anti-S. epidermidis drugs.

Expression of S. epidermidis Nucleic Acids

Table 2, which is appended herewith and which forms part of the present specification, provides a list of open reading frames (ORFs) in both strands and a putative identification of the particular function of a polypeptide which is encoded by each ORF, based on the homology match (determined by the BLASTP2 algorithm) of the predicted polypeptide with known proteins encoded by ORFs in other organisms. An ORF is a region of nucleic acid which encodes a polypeptide. This region may represent a portion of a coding sequence or a total sequence and was determined from stop to stop codons. The first column contains a designation for the ORF (“ORF Name”). The second and third columns list the SEQ ID numbers for the nucleic acid (“NT ID”) and amino acid (“AA ID”) sequences corresponding to each ORF, respectively. The fourth and fifth columns list the length of the nucleic acid ORF (“NT LN”) and the length of the amino acid ORF (“AA LN”), respectively. The nucleotide sequence corresponding to each ORF begins at the first nucleotide immediately following a stop codon and ends at the nucleotide immediately preceding the next downstream stop codon in the same reading frame. It will be recognized by one skilled in the art that the natural translation initiation sites will correspond to ATG, GTG, or TTG codons located within the ORFs. The natural initiation sites depend not only on the sequence of a start codon but also on the context of the DNA sequence adjacent to the start codon. Usually, a recognizable ribosome binding site is found within 20 nucleotides upstream from the initiation codon. In some cases where genes are translationally coupled and coordinately expressed together in “operons”, ribosome binding sites are not present, but the initiation codon of a downstream gene may occur very close to, or overlap, the stop codon of the an upstream gene in the same operon. The correct start codons can be generally identified without undue experimentation because only a few codons need be tested. It is recognized that the translational machinery in bacteria initiates all polypeptide chains with the amino acid methionine, regardless of the sequence of the start codon. In some cases, polypeptides are post-translationally modified, resulting in an N-terminal amino acid other than methionine in vivo. The sixth and seventh columns provide metrics for assessing the likelihood of the homology match (determined by the BLASTP2 algorithm), as is known in the art, to the genes indicated in the description frame (“Desciption”) below the ORF Name. These genes in the Description were identified when the designated ORF was compared against a comprehensive non-redundant protein database. Specifically, the sixth column represents the Blast Score (“Score”) for the match (a higher score is a better match), and the seventh column represents the probability (“P-value”) for the match (the probability that such a match can have occurred by chance; the lower the value, the more likely the match is valid). If a BLASTP2 score of less than 100 was obtained, no value is reported in the table. The Description provides, where available, the Swissprot accession number (SP), the locus name (LN), the Organism (OR), Source of variant (SR), E.C. number (EC), the gene name (GN), the product name (PN), the Function Description (FN), Left End (LE), Right End (RE), Coding Direction (DI), and the description (DE) or notes (NT) for each ORF. This information allows one of ordinary skill in the art to determine a potential use for each identified coding sequence and, as a result, allows to use the polypeptides of the present invention for commercial and industrial purposes.

Using the information provided in SEQ ID NO: 1–SEQ ID NO: 3772, SEQ ID NO: 3773–SEQ ID NO: 7544 and in Table 2 together with routine cloning and sequencing methods, one of ordinary skill in the art will be able to clone and sequence all the nucleic acid fragments of interest including open reading frames (ORFs) encoding a large variety of proteins of S. epidermidis.

Nucleic acid isolated or synthesized in accordance with the sequences described herein have utility to generate polypeptides. The nucleic acid of the invention exemplified in SEQ ID NO: 1–SEQ ID NO: 3772 and in Table 2 or fragments of said nucleic acid encoding active portions of S. epidermidis polypeptides can be cloned into suitable vectors or used to isolate nucleic acid. The isolated nucleic acid is combined with suitable DNA linkers and cloned into a suitable vector.

The function of a specific gene or operon can be ascertained by expression in a bacterial strain under conditions where the activity of the gene product(s) specified by the gene or operon in question can be specifically measured. Alternatively, a gene product may be produced in large quantities in an expressing strain for use as an antigen, an industrial reagent, for structural studies, etc. This expression can be accomplished in a mutant strain which lacks the activity of the gene to be tested, or in a strain that does not produce the same gene product(s). This includes, but is not limited to, Eucaryotic species such as the yeast Saccharomyces cerevisiae, Methanobacterium strains or other Archaea, and Eubacteria such as E. coli, B. Subtilis, S. Aureus, S. Pneumonia or Pseudomonas putida. In some cases the expression host will utilize the natural S. epidermidis promoter whereas in others, it will be necessary to drive the gene with a promoter sequence derived from the expressing organism (e.g., an E. coli beta-galactosidase promoter for expression in E. coli).

To express a gene product using the natural S. epidermidis promoter, a procedure such as the following can be used. A restriction fragment containing the gene of interest, together with its associated natural promoter element and regulatory sequences (identified using the DNA sequence data) is cloned into an appropriate recombinant plasmid containing an origin of replication that functions in the host organism and an appropriate selectable marker. This can be accomplished by a number of procedures known to those skilled in the art. It is most preferably done by cutting the plasmid and the fragment to be cloned with the same restriction enzyme to produce compatible ends that can be ligated to join the two pieces together. The recombinant plasmid is introduced into the host organism by, for example, electroporation and cells containing the recombinant plasmid are identified by selection for the marker on the plasmid. Expression of the desired gene product is detected using an assay specific for that gene product.

In the case of a gene that requires a different promoter, the body of the gene (coding sequence) is specifically excised and cloned into an appropriate expression plasmid. This subcloning can be done by several methods, but is most easily accomplished by PCR amplification of a specific fragment and ligation into an expression plasmid after treating the PCR product with a restriction enzyme or exonuclease to create suitable ends for cloning.

A suitable host cell for expression of a gene can be any procaryotic or eucaryotic cell. Suitable methods for transforming host cells can be found in Sambrook et al. (Molecular Cloning: A Laboratory Manual, 2nd Edition, Cold Spring Harbor Laboratory Press (1989)), and other laboratory textbooks.

For example, a host cell transfected with a nucleic acid vector directing expression of a nucleotide sequence encoding an S. epidermidis polypeptide can be cultured under appropriate conditions to allow expression of the polypeptide to occur. Suitable media for cell culture are well known in the art. Polypeptides of the invention can be isolated from cell culture medium, host cells, or both using techniques known in the art for purifying proteins including ion-exchange chromatography, gel filtration chromatography, ultrafiltration, electrophoresis, and immunoaffinity purification with antibodies specific for such polypeptides. Additionally, in many situations, polypeptides can be produced by chemical cleavage of a native protein (e.g., tryptic digestion) and the cleavage products can then be purified by standard techniques.

In the case of membrane bound proteins, these can be isolated from a host cell by contacting a membrane-associated protein fraction with a detergent forming a solubilized complex, where the membrane-associated protein is no longer entirely embedded in the membrane fraction and is solubilized at least to an extent which allows it to be chromatographically isolated from the membrane fraction. Chromatographic techniques which can be used in the final purification step are known in the art and include hydrophobic interaction, lectin affinity, ion exchange, dye affinity and immunoaffinity.

One strategy to maximize recombinant S. epidermidis peptide expression in E. coli is to express the protein in a host bacteria with an impaired capacity to proteolytically cleave the recombinant protein (Gottesman, S., Gene Expression Technology: Methods in Enzymology 185, Academic Press, San Diego, Calif. (1990) 119–128). Another strategy would be to alter the nucleic acid encoding an S. epidermidis peptide to be inserted into an expression vector so that the individual codons for each amino acid would be those preferentially utilized in highly expressed E. coli proteins (Wada et al., (1992) Nuc. Acids Res. 20:2111–2118). Such alteration of nucleic acids of the invention can be carried out by standard DNA synthesis techniques.

The nucleic acids of the invention can also be chemically synthesized using standard techniques. Various methods of chemically synthesizing polydeoxynucleotides are known, including solid-phase synthesis which, like peptide synthesis, has been fully automated in commercially available DNA synthesizers (See, e.g., Itakura et al. U.S. Pat. No. 4,598,049; Caruthers et al. U.S. Pat. No. 4,458,066; and Itakura U.S. Pat. Nos. 4,401,796 and 4,373,071, incorporated by reference herein).

The present invention provides a library of S. epidermidis-derived nucleic acid sequences. The libraries provide probes, primers, and markers which can be used as markers in epidemiological studies. The present invention also provides a library of S. epidermidis-derived nucleic acid sequences which comprise or encode targets for therapeutic drugs.

Nucleic acids comprising any of the sequences disclosed herein or sub-sequences thereof can be prepared by standard methods using the nucleic acid sequence information provided in SEQ ID NO: 1–SEQ ID NO: 3772. For example, DNA can be chemically synthesized using, e.g., the phosphoramidite solid support method of Matteucci et al., 1981, J. Am. Chem. Soc. 103:3185, the method of Yoo et al., 1989, J. Biol. Chem. 764:17078, or other well known methods. This can be done by sequentially linking a series of oligonucleotide cassettes comprising pairs of synthetic oligonucleotides, as described below.

Of course, due to the degeneracy of the genetic code, many different nucleotide sequences can encode polypeptides having the amino acid sequences defined by SEQ ID NO: 3773–SEQ ID NO: 7544 or sub-sequences thereof. The codons can be selected for optimal expression in prokaryotic or eukaryotic systems. Such degenerate variants are also encompassed by this invention.

Insertion of nucleic acids (typically DNAs) encoding the polypeptides of the invention into a vector is easily accomplished when the termini of both the DNAs and the vector comprise compatible restriction sites. If this cannot be done, it may be necessary to modify the termini of the DNAs and/or vector by digesting back single-stranded DNA overhangs generated by restriction endonuclease cleavage to produce blunt ends, or to achieve the same result by filling in the single-stranded termini with an appropriate DNA polymerase.

Alternatively, any site desired may be produced, e.g., by ligating nucleotide sequences (linkers) onto the termini. Such linkers may comprise specific oligonucleotide sequences that define desired restriction sites. Restriction sites can also be generated by the use of the polymerase chain reaction (PCR). See, e.g., Saiki et al., 1988, Science 239:48. The cleaved vector and the DNA fragments may also be modified if required by homopolymeric tailing.

The nucleic acids of the invention may be isolated directly from cells. Alternatively, the polymerase chain reaction (PCR) method can be used to produce the nucleic acids of the invention, using either chemically synthesized strands or genomic material as templates. Primers used for PCR can be synthesized using the sequence information provided herein and can further be designed to introduce appropriate new restriction sites, if desirable, to facilitate incorporation into a given vector for recombinant expression.

The nucleic acids of the present invention may be flanked by natural S. epidermidis regulatory sequences, or may be associated with heterologous sequences, including promoters, enhancers, response elements, signal sequences, polyadenylation sequences, introns, 5′- and 3′-noncoding regions, and the like. The nucleic acids may also be modified by many means known in the art. Non-limiting examples of such modifications include methylation, “caps”, substitution of one or more of the naturally occurring nucleotides with an analog, internucleotide modifications such as, for example, those with uncharged linkages (e.g., methyl phosphonates, phosphotriesters, phosphoroamidates, carbamates, etc.) and with charged linkages (e.g., phosphorothioates, phosphorodithioates, etc.). Nucleic acids may contain one or more additional covalently linked moieties, such as, for example, proteins (e.g., nucleases, toxins, antibodies, signal peptides, poly-L-lysine, etc.), intercalators (e.g., acridine, psoralen, etc.), chelators (e.g., metals, radioactive metals, iron, oxidative metals, etc.), and alkylators. PNAs are also included. The nucleic acid may be derivatized by formation of a methyl or ethyl phosphotriester or an alkyl phosphoramidate linkage. Furthermore, the nucleic acid sequences of the present invention may also be modified with a label capable of providing a detectable signal, either directly or indirectly. Exemplary labels include radioisotopes, fluorescent molecules, biotin, and the like.

The invention also provides nucleic acid vectors comprising the disclosed S. epidermidis-derived sequences or derivatives or fragments thereof. A large number of vectors, including plasmid and bacterial vectors, have been described for replication and/or expression in a variety of eukaryotic and prokaryotic hosts, and may be used for cloning or protein expression.

The encoded S. epidermidis polypeptides may be expressed by using many known vectors, such as pUC plasmids, pET plasmids (Novagen, Inc., Madison, Wis.), or pRSET or pREP (Invitrogen, San Diego, Calif.), and many appropriate host cells, using methods disclosed or cited herein or otherwise known to those skilled in the relevant art. The particular choice of vector/host is not critical to the practice of the invention.

Recombinant cloning vectors will often include one or more replication systems for cloning or expression, one or more markers for selection in the host, e.g. antibiotic resistance, and one or more expression cassettes. The inserted S. epidermidis coding sequences may be synthesized by standard methods, isolated from natural sources, or prepared as hybrids, etc. Ligation of the S. epidermidis coding sequences to transcriptional regulatory elements and/or to other amino acid coding sequences may be achieved by known methods. Suitable host cells may be transformed/transfected/infected as appropriate by any suitable method including electroporation, CaCl₂ mediated DNA uptake, bacterial infection, microinjection, microprojectile, or other established methods.

Appropriate host cells include bacteria, archebacteria, fungi, especially yeast, and plant and animal cells, especially mammalian cells. Of particular interest are S. epidermidis, E. coli, B. Subtilis, Saccharomyces cerevisiae, Saccharomyces carlsbergensis, Schizosaccharomyces pombi, SF9 cells, C129 cells, 293 cells, Neurospora, and CHO cells, COS cells, HeLa cells, and immortalized mammalian myeloid and lymphoid cell lines. Preferred replication systems include M13, ColE 1, SV40, baculovirus, lambda, adenovirus, and the like. A large number of transcription initiation and termination regulatory regions have been isolated and shown to be effective in the transcription and translation of heterologous proteins in the various hosts. Examples of these regions, methods of isolation, manner of manipulation, etc. are known in the art. Under appropriate expression conditions, host cells can be used as a source of recombinantly produced S. epidermidis-derived peptides and polypeptides.

Advantageously, vectors may also include a transcription regulatory element (i.e., a promoter) operably linked to the S. epidermidis portion. The promoter may optionally contain operator portions and/or ribosome binding sites. Non-limiting examples of bacterial promoters compatible with E. coli include: b-lactamase (penicillinase) promoter; lactose promoter; tryptophan (trp) promoter; araBAD (arabinose) operon promoter; lambda-derived P₁ promoter and N gene ribosome binding site; and the hybrid tac promoter derived from sequences of the trp and lac UV5 promoters. Non-limiting examples of yeast promoters include 3-phosphoglycerate kinase promoter, glyceraldehyde-3-phosphate dehydrogenase (GAPDH) promoter, galactokinase (GAL 1) promoter, galactoepimerase promoter, and alcohol dehydrogenase (ADH) promoter. Suitable promoters for mammalian cells include without limitation viral promoters such as that from Simian Virus 40 (SV40), Rous sarcoma virus (RSV), adenovirus (ADV), and bovine papilloma virus (BPV). Mammalian cells may also require terminator sequences, polyA addition sequences and enhancer sequences to increase expression. Sequences which cause amplification of the gene may also be desirable. Furthermore, sequences that facilitate secretion of the recombinant product from cells, including, but not limited to, bacteria, yeast, and animal cells, such as secretory signal sequences and/or prohormone pro region sequences, may also be included. These sequences are well described in the art.

Nucleic acids encoding wild-type or variant S. epidermidis-derived polypeptides may also be introduced into cells by recombination events. For example, such a sequence can be introduced into a cell, and thereby effect homologous recombination at the site of an endogenous gene or a sequence with substantial identity to the gene. Other recombination- based methods such as nonhomologous recombinations or deletion of endogenous genes by homologous recombination may also be used.

The nucleic acids of the present invention find use as templates for the recombinant production of S. epidermidis-derived peptides or polypeptides.

Identification and Use of S. epidermidis Nucleic Acid Sequences

The disclosed S. epidermidis polypeptide and nucleic acid sequences, or other sequences that are contained within ORFs, including complete protein-coding sequences, of which any of the disclosed S. epidermidis-specific sequences forms a part, are useful as target components for diagnosis and/or treatment of S. epidermidis-caused infection.

It will be understood that the sequence of an entire protein-coding sequence of which each disclosed nucleic acid sequence forms a part can be isolated and identified based on each disclosed sequence. This can be achieved, for example, by using an isolated nucleic acid encoding the disclosed sequence, or fragments thereof, to prime a sequencing reaction with genomic S. epidermidis DNA as template; this is followed by sequencing the amplified product. The isolated nucleic acid encoding the disclosed sequence, or fragments thereof, can also be hybridized to S. epidermidis genomic libraries to identify clones containing additional complete segments of the protein-coding sequence of which the shorter sequence forms a part. Then, the entire protein-coding sequence, or fragments thereof, or nucleic acids encoding all or part of the sequence, or sequence-conservative or function-conservative variants thereof, may be employed in practicing the present invention.

Preferred sequences are those that are useful in diagnostic and/or therapeutic applications. Diagnostic applications include without limitation nucleic-acid-based and antibody-based methods for detecting bacterial infection. Therapeutic applications include without limitation vaccines, passive immunotherapy, and drug treatments directed against gene products that are both unique to bacteria and essential for growth and/or replication of bacteria.

Identification of Nucleic Acids Encoding Vaccine Components and Targets for Agents Effective Against S. epidermidis

The disclosed S. epidermidis genome sequence includes segments that direct the synthesis of ribonucleic acids and polypeptides, as well as origins of replication, promoters, other types of regulatory sequences, and intergenic nucleic acids. The invention encompasses nucleic acids encoding immunogenic components of vaccines and targets for agents effective against S. epidermidis. Identification of said immunogenic components involved in the determination of the function of the disclosed sequences, which can be achieved using a variety of approaches. Non-limiting examples of these approaches are described briefly below.

Homology to Known Sequences:

Computer-assisted comparison of the disclosed S. epidermidis sequences with previously reported sequences present in publicly available databases is useful for identifying functional S. epidermidis nucleic acid and polypeptide sequences. It will be understood that protein-coding sequences, for example, may be compared as a whole, and that a high degree of sequence homology between two proteins (such as, for example, >80–90%) at the amino acid level indicates that the two proteins also possess some degree of functional homology, such as, for example, among enzymes involved in metabolism, DNA synthesis, or cell wall synthesis, and proteins involved in transport, cell division, etc. In addition, many structural features of particular protein classes have been identified and correlate with specific consensus sequences, such as, for example, binding domains for nucleotides, DNA, metal ions, and other small molecules; sites for covalent modifications such as phosphorylation, acylation, and the like; sites of protein:protein interactions, etc. These consensus sequences may be quite short and thus may represent only a fraction of the entire protein-coding sequence. Identification of such a feature in an S. epidermidis sequence is therefore useful in determining the function of the encoded protein and identifying useful targets of antibacterial drugs.

Of particular relevance to the present invention are structural features that are common to secretory, transmembrane, and surface proteins, including secretion signal peptides and hydrophobic transmembrane domains. S. epidermidis proteins identified as containing putative signal sequences and/or transmembrane domains are useful as immunogenic components of vaccines.

Targets for therapeutic drugs according to the invention include, but are not limited to, polypeptides of the invention, whether unique to S. epidermidis or not, that are essential for growth and/or viability of S. epidermidis under at least one growth condition. Polypeptides essential for growth and/or viability can be determined by examining the effect of deleting and/or disrupting the genes, i.e., by so-called gene “knockout”. Alternatively, genetic footprinting can be used (Smith et al., 1995, Proc. Natl. Acad. Sci. USA 92:5479–6433; Published International Application WO 94/26933; U.S. Pat. No. 5,612,180). Still other methods for assessing essentiality includes the ability to isolate conditional lethal mutations in the specific gene (e.g., temperature sensitive mutations). Other useful targets for therapeutic drugs, which include polypeptides that are not essential for growth or viability per se but lead to loss of viability of the cell, can be used to target therapeutic agents to cells.

Strain-Specific Sequences:

Because of the evolutionary relationship between different S. epidermidis strains, it is believed that the presently disclosed S. epidermidis sequences are useful for identifying, and/or discriminating between, previously known and new S. epidermidis strains. It is believed that other S. epidermidis strains will exhibit at least about 70% sequence homology with the presently disclosed sequence. Systematic and routine analyses of DNA sequences derived from samples containing S. epidermidis strains, and comparison with the present sequence allows for the identification of sequences that can be used to discriminate between strains, as well as those that are common to all S. epidermidis strains. In one embodiment, the invention provides nucleic acids, including probes, and peptide and polypeptide sequences that discriminate between different strains of S. epidermidis. Strain-specific components can also be identified functionally by their ability to elicit or react with antibodies that selectively recognize one or more S. epidermidis strains.

In another embodiment, the invention provides nucleic acids, including probes, and peptide and polypeptide sequences that are common to all S. epidermidis strains but are not found in other bacterial species.

S. epidermidis Polypeptides

This invention encompasses isolated S. epidermidis polypeptides encoded by the disclosed S. epidermidis genomic sequences, including the polypeptides of the invention contained in the Sequence Listing. Polypeptides of the invention are preferably at least about amino acid residues in length. Using the DNA sequence information provided herein, the amino acid sequences of the polypeptides encompassed by the invention can be deduced using methods well-known in the art. It will be understood that the sequence of an entire nucleic acid encoding an S. epidermidis polypeptide can be isolated and identified based on an ORF that encodes only a fragment of the cognate protein-coding region. This can be achieved, for example, by using the isolated nucleic acid encoding the ORF, or fragments thereof, to prime a polymerase chain reaction with genomic S. epidermidis DNA as template; this is followed by sequencing the amplified product.

The polypeptides of the present invention, including function-conservative variants of the disclosed ORFs, may be isolated from wild-type or mutant S. epidermidis cells, or from heterologous organisms or cells (including, but not limited to, bacteria, fungi, insect, plant, and mammalian cells) including S. epidermidis into which an S. epidermidis-derived protein-coding sequence has been introduced and expressed. Furthermore, the polypeptides may be part of recombinant fusion proteins.

S. epidermidis polypeptides of the invention can be chemically synthesized using commercially automated procedures such as those referenced herein, including, without limitation, exclusive solid phase synthesis, partial solid phase methods, fragment condensation or classical solution synthesis. The polypeptides are preferably prepared by solid phase peptide synthesis as described by Merrifield, 1963, J. Am. Chem. Soc. 85:2149. The synthesis is carried out with amino acids that are protected at the alpha-amino terminus. Trifunctional amino acids with labile side-chains are also protected with suitable groups to prevent undesired chemical reactions from occurring during the assembly of the polypeptides. The alpha-amino protecting group is selectively removed to allow subsequent reaction to take place at the amino-terminus. The conditions for the removal of the alpha-amino protecting group do not remove the side-chain protecting groups.

Methods for polypeptide purification are well-known in the art, including, without limitation, preparative disc-gel electrophoresis, isoelectric focusing, HPLC, reversed-phase HPLC, gel filtration, ion exchange and partition chromatography, and countercurrent distribution. For some purposes, it is preferable to produce the polypeptide in a recombinant system in which the S. epidermidis protein contains an additional sequence tag that facilitates purification, such as, but not limited to, a polyhistidine sequence. The polypeptide can then be purified from a crude lysate of the host cell by chromatography on an appropriate solid- phase matrix. Alternatively, antibodies produced against an S. epidermidis protein or against peptides derived therefrom can be used as purification reagents. Other purification methods are possible.

The present invention also encompasses derivatives and homologues of S. epidermidis-encoded polypeptides. For some purposes, nucleic acid sequences encoding the peptides may be altered by substitutions, additions, or deletions that provide for functionally equivalent molecules, i.e., function-conservative variants. For example, one or more amino acid residues within the sequence can be substituted by another amino acid of similar properties, such as, for example, positively charged amino acids (arginine, lysine, and histidine); negatively charged amino acids (aspartate and glutamate); polar neutral amino acids; and non-polar amino acids.

The isolated polypeptides may be modified by, for example, phosphorylation, sulfation, acylation, or other protein modifications. They may also be modified with a label capable of providing a detectable signal, either directly or indirectly, including, but not limited to, radioisotopes and fluorescent compounds.

To identify S. epidermidis-derived polypeptides for use in the present invention, essentially the complete genomic sequence of a virulent, methicillin-resistant isolate of Staphylococcus mirabilis isolate was analyzed. While, in very rare instances, a nucleic acid sequencing error may be revealed, resolving a rare sequencing error is well within the art, and such an occurrence will not prevent one skilled in the art from practicing the invention.

Also encompassed are any S. epidermidis polypeptide sequences that are contained within the open reading frames (ORFs), including complete protein-coding sequences, of which any of SEQ ID NO: 1–SEQ ID NO: 3772 forms a part. Table 2, which is appended herewith and which forms part of the present specification, provides a putative identification of the particular function of a polypeptide which is encoded by each ORF, based on the homology match (determined by the BLAST algorithm) of the predicted polypeptide with known proteins encoded by ORFs in other organisms. As a result, one skilled in the art can use the polypeptides of the present invention for commercial and industrial purposes consistent with the type of putative identification of the polypeptide.

The present invention provides a library of S. epidermidis-derived polypeptide sequences, and a corresponding library of nucleic acid sequences encoding the polypeptides, wherein the polypeptides themselves, or polypeptides contained within ORFs of which they form a part, comprise sequences that are contemplated for use as components of vaccines. Non-limiting examples of such sequences are listed by SEQ ID NO in Table 2, which is appended herewith and which forms part of the present specification.

The present invention also provides a library of S. epidermidis-derived polypeptide sequences, and a corresponding library of nucleic acid sequences encoding the polypeptides, wherein the polypeptides themselves, or polypeptides contained within ORFs of which they form a part, comprise sequences lacking homology to any known prokaryotic or eukaryotic sequences. Such libraries provide probes, primers, and markers which can be used to diagnose S. epidermidis infection, including use as markers in epidemiological studies. Non- limiting examples of such sequences are listed by SEQ ID NO in Table 2, which is appended hereto and part hereof.

The present invention also provides a library of S. epidermidis-derived polypeptide sequences, and a corresponding library of nucleic acid sequences encoding the polypeptides, wherein the polypeptides themselves, or polypeptides contained within ORFs of which they form a part, comprise targets for therapeutic drugs.

SPECIFIC EXAMPLE Determination Of Staphylococcus Protein Antigens for Antibody and Vaccine Development

The selection of Staphylococcus protein antigens for vaccine development can be derived from the nucleic acids encoding S. epidermidis polypeptides. First, the ORF's can be analyzed for homology to other known exported or membrane proteins and analyzed using the discriminant analysis described by Klein, et al. (Klein, P., Kanehsia, M., and DeLisi, C. (1985) Biochimica et Biophysica Acta 815, 468–476) for predicting exported and membrane proteins.

Homology searches can be performed using the BLAST algorithm contained in the Wisconsin Sequence Analysis Package (Genetics Computer Group, University Research Park, 575 Science Drive, Madison, Wis. 53711) to compare each predicted ORF amino acid sequence with all sequences found in the current GenBank, SWISS-PROT and PIR databases. BLAST searches for local alignments between the ORF and the databank sequences and reports a probability score which indicates the probability of finding this sequence by chance in the database. ORF's with significant homology (e.g. probabilities lower than 1×10⁻¹ that the homology is only due to random chance) to membrane or exported proteins represent protein antigens for vaccine development. Possible functions can be provided to S. epidermidis genes based on sequence homology to genes cloned in other organisms.

Discriminant analysis (Klein, et al. supra) can be used to examine the ORF amino acid sequences. This algorithm uses the intrinsic information contained in the ORF amino acid sequence and compares it to information derived from the properties of known membrane and exported proteins. This comparison predicts which proteins will be exported, membrane associated or cytoplasmic. ORF amino acid sequences identified as exported or membrane associated by this algorithm are likely protein antigens for vaccine development.

Production of Fragments and Analogs of S. epidermidis Nucleic Acids and Polypeptides

Based on the discovery of the S. epidermidis gene products of the invention provided in the Sequence Listing, one skilled in the art can alter the disclosed structure of S. epidermidis genes, e.g., by producing fragments or analogs, and test the newly produced structures for activity. Examples of techniques known to those skilled in the relevant art which allow the production and testing of fragments and analogs are discussed below. These, or analogous methods can be used to make and screen libraries of polypeptides, e.g., libraries of random peptides or libraries of fragments or analogs of cellular proteins for the ability to bind S. epidermidis polypeptides. Such screens are useful for the identification of inhibitors of S. epidermidis.

Generation of Fragments

Fragments of a protein can be produced in several ways, e.g., recombinantly, by proteolytic digestion, or by chemical synthesis. Internal or terminal fragments of a polypeptide can be generated by removing one or more nucleotides from one end (for a terminal fragment) or both ends (for an internal fragment) of a nucleic acid which encodes the polypeptide. Expression of the mutagenized DNA produces polypeptide fragments. Digestion with “end-nibbling” endonucleases can thus generate DNAs which encode an array of fragments. DNAs which encode fragments of a protein can also be generated by random shearing, restriction digestion or a combination of the above-discussed methods.

Fragments can also be chemically synthesized using techniques known in the art such as conventional Merrifield solid phase f-Moc or t-Boc chemistry. For example, peptides of the present invention may be arbitrarily divided into fragments of desired length with no overlap of the fragments, or divided into overlapping fragments of a desired length.

Alteration of Nucleic Acids and Polypeptides: Random Methods

Amino acid sequence variants of a protein can be prepared by random mutagenesis of DNA which encodes a protein or a particular domain or region of a protein. Useful methods include PCR mutagenesis and saturation mutagenesis. A library of random amino acid sequence variants can also be generated by the synthesis of a set of degenerate oligonucleotide sequences. (Methods for screening proteins in a library of variants are elsewhere herein).

PCR Mutagenesis

In PCR mutagenesis, reduced Taq polymerase fidelity is used to introduce random mutations into a cloned fragment of DNA (Leung et al., 1989, Technique 1:11–15). The DNA region to be mutagenized is amplified using the polymerase chain reaction (PCR) under conditions that reduce the fidelity of DNA synthesis by Taq DNA polymerase, e.g., by using a dGTP/dATP ratio of five and adding Mn²⁺ to the PCR reaction. The pool of amplified DNA fragments are inserted into appropriate cloning vectors to provide random mutant libraries.

Saturation Mutagenesis

Saturation mutagenesis allows for the rapid introduction of a large number of single base substitutions into cloned DNA fragments (Mayers et al., 1985, Science 229:242). This technique includes generation of mutations, e.g., by chemical treatment or irradiation of single-stranded DNA in vitro, and synthesis of a complimentary DNA strand. The mutation frequency can be modulated by modulating the severity of the treatment, and essentially all possible base substitutions can be obtained. Because this procedure does not involve a genetic selection for mutant fragments both neutral substitutions, as well as those that alter function, are obtained. The distribution of point mutations is not biased toward conserved sequence elements.

Degenerate Oligonucleotides

A library of homologs can also be generated from a set of degenerate oligonucleotide sequences. Chemical synthesis of a degenerate sequences can be carried out in an automatic DNA synthesizer, and the synthetic genes then ligated into an appropriate expression vector. The synthesis of degenerate oligonucleotides is known in the art (see for example, Narang, S A (1983) Tetrahedron 39:3; Itakura et al. (1981) Recombinant DNA, Proc 3rd Cleveland Sympos. Macromolecules, ed. AG Walton, Amsterdam: Elsevier pp273–289; Itakura et al. (1984) Annu. Rev. Biochem. 53:323; Itakura et al. (1984) Science 198:1056; Ike et al. (1983) Nucleic Acid Res. 11:477. Such techniques have been employed in the directed evolution of other proteins (see, for example, Scott et al. (1990) Science 249:386–390; Roberts et al. (1992) PNAS 89:2429–2433; Devlin et al. (1990) Science 249: 404–406; Cwirla et al. (1990) PNAS 87: 6378–6382; as well as U.S. Pat. Nos. 5,223,409, 5,198,346, and 5,096,815).

Alteration of Nucleic Acids and Polypeptides: Methods for Directed Mutagenesis

Non-random or directed, mutagenesis techniques can be used to provide specific sequences or mutations in specific regions. These techniques can be used to create variants which include, e.g., deletions, insertions, or substitutions, of residues of the known amino acid sequence of a protein. The sites for mutation can be modified individually or in series, e.g., by (1) substituting first with conserved amino acids and then with more radical choices depending upon results achieved, (2) deleting the target residue, or (3) inserting residues of the same or a different class adjacent to the located site, or combinations of options 1–3.

Alanine Scanning Mutagenesis

Alanine scanning mutagenesis is a useful method for identification of certain residues or regions of the desired protein that are preferred locations or domains for mutagenesis, Cunningham and Wells (Science 244:1081–1085, 1989). In alanine scanning, a residue or group of target residues are identified (e.g., charged residues such as Arg, Asp, His, Lys, and Glu) and replaced by a neutral or negatively charged amino acid (most preferably alanine or polyalanine). Replacement of an amino acid can affect the interaction of the amino acids with the surrounding aqueous environment in or outside the cell. Those domains demonstrating functional sensitivity to the substitutions are then refined by introducing further or other variants at or for the sites of substitution. Thus, while the site for introducing an amino acid sequence variation is predetermined, the nature of the mutation per se need not be predetermined. For example, to optimize the performance of a mutation at a given site, alanine scanning or random mutagenesis may be conducted at the target codon or region and the expressed desired protein subunit variants are screened for the optimal combination of desired activity.

Oligonucleotide-Mediated Mutagenesis

Oligonucleotide-mediated mutagenesis is a useful method for preparing substitution, deletion, and insertion variants of DNA, see, e.g., Adelman et al., (DNA 2:183, 1983). Briefly, the desired DNA is altered by hybridizing an oligonucleotide encoding a mutation to a DNA template, where the template is the single-stranded form of a plasmid or bacteriophage containing the unaltered or native DNA sequence of the desired protein. After hybridization, a DNA polymerase is used to synthesize an entire second complementary strand of the template that will thus incorporate the oligonucleotide primer, and will code for the selected alteration in the desired protein DNA. Generally, oligonucleotides of at least about 25 nucleotides in length are used. An optimal oligonucleotide will have 12 to 15 nucleotides that are completely complementary to the template on either side of the nucleotide(s) coding for the mutation. This ensures that the oligonucleotide will hybridize properly to the single- stranded DNA template molecule. The oligonucleotides are readily synthesized using techniques known in the art such as that described by Crea et al. (Proc. Natl. Acad. Sci. USA, 75: 5765[1978]).

Cassette Mutagenesis

Another method for preparing variants, cassette mutagenesis, is based on the technique described by Wells et al. (Gene, 34:315[1985]). The starting material is a plasmid (or other vector) which includes the protein subunit DNA to be mutated. The codon(s) in the protein subunit DNA to be mutated are identified. There must be a unique restriction endonuclease site on each side of the identified mutation site(s). If no such restriction sites exist, they may be generated using the above-described oligonucleotide-mediated mutagenesis method to introduce them at appropriate locations in the desired protein subunit DNA. After the restriction sites have been introduced into the plasmid, the plasmid is cut at these sites to linearize it. A double-stranded oligonucleotide encoding the sequence of the DNA between the restriction sites but containing the desired mutation(s) is synthesized using standard procedures. The two strands are synthesized separately and then hybridized together using standard techniques. This double-stranded oligonucleotide is referred to as the cassette. This cassette is designed to have 3′ and 5′ ends that are comparable with the ends of the linearized plasmid, such that it can be directly ligated to the plasmid. This plasmid now contains the mutated desired protein subunit DNA sequence.

Combinatorial Mutagenesis

Combinatorial mutagenesis can also be used to generate mutants (Ladner et al., WO 88/06630). In this method, the amino acid sequences for a group of homologs or other related proteins are aligned, preferably to promote the highest homology possible. All of the amino acids which appear at a given position of the aligned sequences can be selected to create a degenerate set of combinatorial sequences. The variegated library of variants is generated by combinatorial mutagenesis at the nucleic acid level, and is encoded by a variegated gene library. For example, a mixture of synthetic oligonucleotides can be enzymatically ligated into gene sequences such that the degenerate set of potential sequences are expressible as individual peptides, or alternatively, as a set of larger fusion proteins containing the set of degenerate sequences.

Other Modifications of S. epidermidis Nucleic Acids and Polypeptides

It is possible to modify the structure of an S. epidermidis polypeptide for such purposes as increasing solubility, enhancing stability (e.g., shelf life ex vivo and resistance to proteolytic degradation in vivo). A modified S. epidermidis protein or peptide can be produced in which the amino acid sequence has been altered, such as by amino acid substitution, deletion, or addition as described herein.

An S. epidermidis peptide can also be modified by substitution of cysteine residues preferably with alanine, serine, threonine, leucine or glutamic acid residues to minimize dimerization via disulfide linkages. In addition, amino acid side chains of fragments of the protein of the invention can be chemically modified. Another modification is cyclization of the peptide.

In order to enhance stability and/or reactivity, an S. epidermidis polypeptide can be modified to incorporate one or more polymorphisms in the amino acid sequence of the protein resulting from any natural allelic variation. Additionally, D-amino acids, non-natural amino acids, or non-amino acid analogs can be substituted or added to produce a modified protein within the scope of this invention. Furthermore, an S. epidermidis polypeptide can be modified using polyethylene glycol (PEG) according to the method of A. Sehon and co- workers (Wie et al., supra) to produce a protein conjugated with PEG. In addition, PEG can be added during chemical synthesis of the protein. Other modifications of S. epidermidis proteins include reduction/alkylation (Tarr, Methods of Protein Microcharacterization, J. E. Silver ed., Humana Press, Clifton N.J. 155–194 (1986)); acylation (Tarr, supra); chemical coupling to an appropriate carrier (Mishell and Shiigi, eds, Selected Methods in Cellular Immunology, WH Freeman, San Francisco, Calif. (1980), U.S. Pat. No. 4,939,239; or mild formalin treatment (Marsh, (1971) Int. Arch. of Allergy and Appl. Immunol., 41: 199–215).

To facilitate purification and potentially increase solubility of an S. epidermidis protein or peptide, it is possible to add an amino acid fusion moiety to the peptide backbone. For example, hexa-histidine can be added to the protein for purification by immobilized metal ion affinity chromatography (Hochuli, E. et al., (1988) Bio/Technology, 6: 1321–1325). In addition, to facilitate isolation of peptides free of irrelevant sequences, specific endoprotease cleavage sites can be introduced between the sequences of the fusion moiety and the peptide.

To potentially aid proper antigen processing of epitopes within an S. epidermidis polypeptide, canonical protease sensitive sites can be engineered between regions, each comprising at least one epitope via recombinant or synthetic methods. For example, charged amino acid pairs, such as KK or RR, can be introduced between regions within a protein or fragment during recombinant construction thereof. The resulting peptide can be rendered sensitive to cleavage by cathepsin and/or other trypsin-like enzymes which would generate portions of the protein containing one or more epitopes. In addition, such charged amino acid residues can result in an increase in the solubility of the peptide.

Primary Methods for Screening Polypeptides and Analogs

Various techniques are known in the art for screening generated mutant gene products. Techniques for screening large gene libraries often include cloning the gene library into replicable expression vectors, transforming appropriate cells with the resulting library of vectors, and expressing the genes under conditions in which detection of a desired activity, e.g., in this case, binding to S. epidermidis polypeptide or an interacting protein, facilitates relatively easy isolation of the vector encoding the gene whose product was detected. Each of the techniques described below is amenable to high through-put analysis for screening large numbers of sequences created, e.g., by random mutagenesis techniques.

Two Hybrid Systems

Two hybrid assays such as the system described below (as with the other screening methods described herein), can be used to identify polypeptides, e.g., fragments or analogs of a naturally-occurring S. epidermidis polypeptide, e.g., of cellular proteins, or of randomly generated polypeptides which bind to an S. epidermidis protein. (The S. epidermidis domain is used as the bait protein and the library of variants are expressed as prey fusion proteins.) In an analogous fashion, a two hybrid assay (as with the other screening methods described herein), can be used to find polypeptides which bind an S. epidermidis polypeptide.

Display Libraries

In one approach to screening assays, the Staphylococcus peptides are displayed on the surface of a cell or viral particle, and the ability of particular cells or viral particles to bind an appropriate receptor protein via the displayed product is detected in a “panning assay”. For example, the gene library can be cloned into the gene for a surface membrane protein of a bacterial cell, and the resulting fusion protein detected by panning (Ladner et al., WO 88/06630; Fuchs et al. (1991) Bio/Technology 9:1370–1371; and Goward et al. (1992) TIBS 18:136–140). In a similar fashion, a detectably labeled ligand can be used to score for potentially functional peptide homologs. Fluorescently labeled ligands, e.g., receptors, can be used to detect homologs which retain ligand-binding activity. The use of fluorescently labeled ligands, allows cells to be visually inspected and separated under a fluorescence microscope, or, where the morphology of the cell permits, to be separated by a fluorescence- activated cell sorter.

A gene library can be expressed as a fusion protein on the surface of a viral particle. For instance, in the filamentous phage system, foreign peptide sequences can be expressed on the surface of infectious phage, thereby conferring two significant benefits. First, since these phage can be applied to affinity matrices at concentrations well over 10¹³ phage per milliliter, a large number of phage can be screened at one time. Second, since each infectious phage displays a gene product on its surface, if a particular phage is recovered from an affinity matrix in low yield, the phage can be amplified by another round of infection. The group of almost identical E. coli filamentous phages, M13, fd., and f1, are most often used in phage display libraries. Either of the phage gIII or gVIII coat proteins can be used to generate fusion proteins without disrupting the ultimate packaging of the viral particle. Foreign epitopes can be expressed at the NH₂-terminal end of pill and phage bearing such epitopes recovered from a large excess of phage lacking this epitope (Ladner et al. PCT publication WO 90/02909; Garrard et al., PCT publication WO 92/09690; Marks et al. (1992) J. Biol. Chem. 267:16007–16010; Griffiths et al. (1993) EMBO J. 12:725–734; Clackson et al. (1991) Nature 352:624–628; and Barbas et al. (1992) PNAS 89:4457–4461).

A common approach uses the maltose receptor of E. coli (the outer membrane protein, LamB) as a peptide fusion partner (Charbit et al. (1986) EMBO 5, 3029–3037). Oligonucleotides have been inserted into plasmids encoding the LamB gene to produce peptides fused into one of the extracellular loops of the protein. These peptides are available for binding to ligands, e.g., to antibodies, and can elicit an immune response when the cells are administered to animals. Other cell surface proteins, e.g., OmpA (Schorr et al. (1991) Vaccines 91, pp. 387–392), PhoE (Agterberg, et al. (1990) Gene 88, 37–45), and PAL (Fuchs et al. (1991) Bio/Tech 9, 1369–1372), as well as large bacterial surface structures have served as vehicles for peptide display. Peptides can be fused to pilin, a protein which polymerizes to form the pilus-a conduit for interbacterial exchange of genetic information (Thiry et al. (1989) Appl. Environ. Microbiol. 55, 984–993). Because of its role in interacting with other cells, the pilus provides a useful support for the presentation of peptides to the extracellular environment. Another large surface structure used for peptide display is the bacterial motive organ, the flagellum. Fusion of peptides to the subunit protein flagellin offers a dense array of many peptide copies on the host cells (Kuwajima et al. (1988) Bio/Tech. 6, 1080–1083). Surface proteins of other bacterial species have also served as peptide fusion partners. Examples include the Staphylococcus protein A and the outer membrane IgA protease of Neisseria (Hansson et al. (1992) J. Bacteriol. 174, 4239–4245 and Klauser et al. (1990) EMBO J. 9, 1991–1999).

In the filamentous phage systems and the LamB system described above, the physical link between the peptide and its encoding DNA occurs by the containment of the DNA within a particle (cell or phage) that carries the peptide on its surface. Capturing the peptide captures the particle and the DNA within. An alternative scheme uses the DNA-binding protein LacI to form a link between peptide and DNA (Cull et al. (1992) PNAS USA 89:1865–1869). This system uses a plasmid containing the LacI gene with an oligonucleotide cloning site at its 3′-end. Under the controlled induction by arabinose, a LacI-peptide fusion protein is produced. This fusion retains the natural ability of LacI to bind to a short DNA sequence known as LacO operator (LacO). By installing two copies of LacO on the expression plasmid, the LacI- peptide fusion binds tightly to the plasmid that encoded it. Because the plasmids in each cell contain only a single oligonucleotide sequence and each cell expresses only a single peptide sequence, the peptides become specifically and stablely associated with the DNA sequence that directed its synthesis. The cells of the library are gently lysed and the peptide-DNA complexes are exposed to a matrix of immobilized receptor to recover the complexes containing active peptides. The associated plasmid DNA is then reintroduced into cells for amplification and DNA sequencing to determine the identity of the peptide ligands. As a demonstration of the practical utility of the method, a large random library of dodecapeptides was made and selected on a monoclonal antibody raised against the opioid peptide dynorphin B. A cohort of peptides was recovered, all related by a consensus sequence corresponding to a six-residue portion of dynorphin B. (Cull et al. (1992) Proc. Natl. Acad. Sci. U.S.A. 89–1869).

This scheme, sometimes referred to as peptides-on-plasmids, differs in two important ways from the phage display methods. First, the peptides are attached to the C-terminus of the fusion protein, resulting in the display of the library members as peptides having free carboxy termini. Both of the filamentous phage coat proteins, pIII and pVIII, are anchored to the phage through their C-termini, and the guest peptides are placed into the outward- extending N-terminal domains. In some designs, the phage-displayed peptides are presented right at the amino terminus of the fusion protein. (Cwirla, et al. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 6378–6382) A second difference is the set of biological biases affecting the population of peptides actually present in the libraries. The LacI fusion molecules are confined to the cytoplasm of the host cells. The phage coat fusions are exposed briefly to the cytoplasm during translation but are rapidly secreted through the inner membrane into the periplasmic compartment, remaining anchored in the membrane by their C-terminal hydrophobic domains, with the N-termini, containing the peptides, protruding into the periplasm while awaiting assembly into phage particles. The peptides in the LacI and phage libraries may differ significantly as a result of their exposure to different proteolytic activities. The phage coat proteins require transport across the inner membrane and signal peptidase processing as a prelude to incorporation into phage. Certain peptides exert a deleterious effect on these processes and are underrepresented in the libraries (Gallop et al. (1994) J. Med. Chem. 37(9):1233–1251). These particular biases are not a factor in the LacI display system.

The number of small peptides available in recombinant random libraries is enormous. Libraries of 10^(7–10) ⁹ independent clones are routinely prepared. Libraries as large as 10¹¹ recombinants have been created, but this size approaches the practical limit for clone libraries. This limitation in library size occurs at the step of transforming the DNA containing randomized segments into the host bacterial cells. To circumvent this limitation, an in vitro system based on the display of nascent peptides in polysome complexes has recently been developed. This display library method has the potential of producing libraries 3–6 orders of magnitude larger than the currently available phage/phagemid or plasmid libraries. Furthermore, the construction of the libraries, expression of the peptides, and screening, is done in an entirely cell-free format.

In one application of this method (Gallop et al. (1994) J. Med. Chem. 37(9):1233–1251), a molecular DNA library encoding 10¹² decapeptides was constructed and the library expressed in an E. coli S30 in vitro coupled transcription/translation system. Conditions were chosen to stall the ribosomes on the mRNA, causing the accumulation of a substantial proportion of the RNA in polysomes and yielding complexes containing nascent peptides still linked to their encoding RNA. The polysomes are sufficiently robust to be affinity purified on immobilized receptors in much the same way as the more conventional recombinant peptide display libraries are screened. RNA from the bound complexes is recovered, converted to cDNA, and amplified by PCR to produce a template for the next round of synthesis and screening. The polysome display method can be coupled to the phage display system. Following several rounds of screening, cDNA from the enriched pool of polysomes was cloned into a phagemid vector. This vector serves as both a peptide expression vector, displaying peptides fused to the coat proteins, and as a DNA sequencing vector for peptide identification. By expressing the polysome-derived peptides on phage, one can either continue the affinity selection procedure in this format or assay the peptides on individual clones for binding activity in a phage ELISA, or for binding specificity in a completion phage ELISA (Barret, et al. (1992) Anal. Biochem 204,357–364). To identify the sequences of the active peptides one sequences the DNA produced by the phagemid host.

Secondary Screening of Polypeptides and Analogs

The high through-put assays described above can be followed by secondary screens in order to identify further biological activities which will, e.g., allow one skilled in the art to differentiate agonists from antagonists. The type of a secondary screen used will depend on the desired activity that needs to be tested. For example, an assay can be developed in which the ability to inhibit an interaction between a protein of interest and its respective ligand can be used to identify antagonists from a group of peptide fragments isolated though one of the primary screens described above.

Therefore, methods for generating fragments and analogs and testing them for activity are known in the art. Once the core sequence of interest is identified, it is routine for one skilled in the art to obtain analogs and fragments.

Peptide Mimetics of S. epidermidis Polypeptides

The invention also provides for reduction of the protein binding domains of the subject S. epidermidis polypeptides to generate mimetics, e.g. peptide or non-peptide agents. The peptide mimetics are able to disrupt binding of a polypeptide to its counter ligand, e.g., in the case of an S. epidermidis polypeptide binding to a naturally occurring ligand. The critical residues of a subject S. epidermidis polypeptide which are involved in molecular recognition of a polypeptide can be determined and used to generate S. epidermidis-derived peptidomimetics which competitively or noncompetitively inhibit binding of the S. epidermidis polypeptide with an interacting polypeptide (see, for example, European patent applications EP-412,762A and EP-B31,080A).

For example, scanning mutagenesis can be used to map the amino acid residues of a particular S. epidermidis polypeptide involved in binding an interacting polypeptide, peptidomimetic compounds (e.g. diazepine or isoquinoline derivatives) can be generated which mimic those residues in binding to an interacting polypeptide, and which therefore can inhibit binding of an S. epidermidis polypeptide to an interacting polypeptide and thereby interfere with the function of S. epidermidis polypeptide. For instance, non-hydrolyzable peptide analogs of such residues can be generated using benzodiazepine (e.g., see Freidinger et al. in Peptides: Chemistry and Biology, G. R. Marshall ed., ESCOM Publisher: Leiden, Netherlands, 1988), azepine (e.g., see Huffman et al. in Peptides: Chemistry and Biology, G. R. Marshall ed., ESCOM Publisher: Leiden, Netherlands, 1988), substituted gama lactam rings (Garvey et al. in Peptides: Chemistry and Biology, G. R. Marshall ed., ESCOM Publisher: Leiden, Netherlands, 1988), keto-methylene pseudopeptides (Ewenson et al. (1986) J Med Chem 29:295; and Ewenson et al. in Peptides: Structure and Function (Proceedings of the 9th American Peptide Symposium) Pierce Chemical Co. Rockland, Ill., 1985), b-turn dipeptide cores (Nagai et al. (1985) Tetrahedron Lett 26:647; and Sato et al. (1986) J Chem Soc Perkin Trans 1:1231), and b-aminoalcohols (Gordon et al. (1985) Biochem Biophys Res Commun 126:419; and et al. (1986)Biochem Biophys Res Commun 134:71).

Vaccine Formulations for S. epidermidis Nucleic Acids and Polypeptides

This invention also features vaccine compositions for protection against infection by S. epidermidis or for treatment of S. epidermidis infection. In one embodiment, the vaccine compositions contain one or more immunogenic components such as a surface protein from S. epidermidis, or portion thereof, and a pharmaceutically acceptable carrier. Nucleic acids within the scope of the invention are exemplified by the nucleic acids of the invention contained in the Sequence Listing which encode S. epidermidis surface proteins. Any nucleic acid encoding an immunogenic S. epidermidis protein, or portion thereof, which is capable of expression in a cell, can be used in the present invention. These vaccines have therapeutic and prophylactic utilities.

One aspect of the invention provides a vaccine composition for protection against infection by S. epidermidis which contains at least one immunogenic fragment of an S. epidermidis protein and a pharmaceutically acceptable carrier. Preferred fragments include peptides of at least about 10 amino acid residues in length, preferably about 10–20 amino acid residues in length, and more preferably about 12–16 amino acid residues in length.

Immunogenic components of the invention can be obtained, for example, by screening polypeptides recombinantly produced from the corresponding fragment of the nucleic acid encoding the full-length S. epidermidis protein. In addition, fragments can be chemically synthesized using techniques known in the art such as conventional Merrifield solid phase f- Moc or t-Boc chemistry.

In one embodiment, immunogenic components are identified by the ability of the peptide to stimulate T cells. Peptides which stimulate T cells, as determined by, for example, T cell proliferation or cytokine secretion are defined herein as comprising at least one T cell epitope. T cell epitopes are believed to be involved in initiation and perpetuation of the immune response to the protein allergen which is responsible for the clinical symptoms of allergy. These T cell epitopes are thought to trigger early events at the level of the T helper cell by binding to an appropriate HLA molecule on the surface of an antigen presenting cell, thereby stimulating the T cell subpopulation with the relevant T cell receptor for the epitope. These events lead to T cell proliferation, lymphokine secretion, local inflammatory reactions, recruitment of additional immune cells to the site of antigen/T cell interaction, and activation of the B cell cascade, leading to the production of antibodies. A T cell epitope is the basic element, or smallest unit of recognition by a T cell receptor, where the epitope comprises amino acids essential to receptor recognition (e.g., approximately 6 or 7 amino acid residues). Amino acid sequences which mimic those of the T cell epitopes are within the scope of this invention.

Screening immunogenic components can be accomplished using one or more of several different assays. For example, in vitro, peptide T cell stimulatory activity is assayed by contacting a peptide known or suspected of being immunogenic with an antigen presenting cell which presents appropriate MHC molecules in a T cell culture. Presentation of an immunogenic S. epidermidis peptide in association with appropriate MHC molecules to T cells in conjunction with the necessary co-stimulation has the effect of transmitting a signal to the T cell that induces the production of increased levels of cytokines, particularly of interleukin-2 and interleukin-4. The culture supernatant can be obtained and assayed for interleukin-2 or other known cytokines. For example, any one of several conventional assays for interleukin-2 can be employed, such as the assay described in Proc. Natl. Acad. Sci USA, 86: 1333 (1989) the pertinent portions of which are incorporated herein by reference. A kit for an assay for the production of interferon is also available from Genzyme Corporation (Cambridge, Mass.).

Alternatively, a common assay for T cell proliferation entails measuring tritiated thymidine incorporation. The proliferation of T cells can be measured in vitro by determining the amount of ³H-labeled thymidine incorporated into the replicating DNA of cultured cells. Therefore, the rate of DNA synthesis and, in turn, the rate of cell division can be quantified.

Vaccine compositions of the invention containing immunogenic components (e.g., S. epidermidis polypeptide or fragment thereof or nucleic acid encoding an S. epidermidis polypeptide or fragment thereof) preferably include a pharmaceutically acceptable carrier. The term “pharmaceutically acceptable carrier” refers to a carrier that does not cause an allergic reaction or other untoward effect in patients to whom it is administered. Suitable pharmaceutically acceptable carriers include, for example, one or more of water, saline, phosphate buffered saline, dextrose, glycerol, ethanol and the like, as well as combinations thereof. Pharmaceutically acceptable carriers may further comprise minor amounts of auxiliary substances such as wetting or emulsifying agents, preservatives or buffers, which enhance the shelf life or effectiveness of the antibody. For vaccines of the invention containing S. epidermidis polypeptides, the polypeptide is co-administered with a suitable adjuvant.

It will be apparent to those of skill in the art that the therapeutically effective amount of DNA or protein of this invention will depend, inter alia, upon the administration schedule, the unit dose of antibody administered, whether the protein or DNA is administered in combination with other therapeutic agents, the immune status and health of the patient, and the therapeutic activity of the particular protein or DNA.

Vaccine compositions are conventionally administered parenterally, e.g., by injection, either subcutaneously or intramuscularly. Methods for intramuscular immunization are described by Wolff et al. (1990) Science 247: 1465–1468 and by Sedegah et al. (1994) Immunology 91: 9866–9870. Other modes of administration include oral and pulmonary formulations, suppositories, and transdermal applications. Oral immunization is preferred over parenteral methods for inducing protection against infection by S. epidermidis. Cain et. al. (1993) Vaccine 11: 637–642. Oral formulations include such normally employed excipients as, for example, pharmaceutical grades of mannitol, lactose, starch, magnesium stearate, sodium saccharine, cellulose, magnesium carbonate, and the like.

The vaccine compositions of the invention can include an adjuvant, including, but not limited to aluminum hydroxide; N-acetyl-muramyl-L-threonyl-D-isoglutamine (thr-MDP); N-acetyl-nor-muramyl-L-alanyl-D-isoglutamine (CGP 11637, referred to as nor-MDP); N- acetylmuramyl-L-alanyl-D-isoglutaminyl-L-alanine-2-(1′-2′-dipalmitoyl-sn-glycero-3-hydroxyphos-phoryloxy)-ethylamine (CGP 19835A, referred to a MTP-PE); RIBI, which contains three components from bacteria; monophosphoryl lipid A; trehalose dimycoloate; cell wall skeleton (MPL+TDM+CWS) in a 2% squalene/Tween 80 emulsion; and cholera toxin. Others which may be used are non-toxic derivatives of cholera toxin, including its B subunit, and/or conjugates or genetically engineered fusions of the S. epidermidis polypeptide with cholera toxin or its B subunit, procholeragenoid, fungal polysaccharides, including schizophyllan, muramyl dipeptide, muramyl dipeptide derivatives, phorbol esters, labile toxin of E. coli, non-S. epidermidis bacterial lysates, block polymers or saponins.

Other suitable delivery methods include biodegradable microcapsules or immuno- stimulating complexes (ISCOMs), cochleates, or liposomes, genetically engineered attenuated live vectors such as viruses or bacteria, and recombinant (chimeric) virus-like particles, e.g., bluetongue. The amount of adjuvant employed will depend on the type of adjuvant used. For example, when the mucosal adjuvant is cholera toxin, it is suitably used in an amount of 5 mg to 50 mg, for example 10 mg to 35 mg. When used in the form of microcapsules, the amount used will depend on the amount employed in the matrix of the microcapsule to achieve the desired dosage. The determination of this amount is within the skill of a person of ordinary skill in the art.

Carrier systems in humans may include enteric release capsules protecting the antigen from the acidic environment of the stomach, and including S. epidermidis polypeptide in an insoluble form as fusion proteins. Suitable carriers for the vaccines of the invention are enteric coated capsules and polylactide-glycolide microspheres. Suitable diluents are 0.2 N NaHCO₃ and/or saline.

Vaccines of the invention can be administered as a primary prophylactic agent in adults or in children, as a secondary prevention, after successful eradication of S. epidermidis in an infected host, or as a therapeutic agent in the aim to induce an immune response in a susceptible host to prevent infection by S. epidermidis. The vaccines of the invention are administered in amounts readily determined by persons of ordinary skill in the art. Thus, for adults a suitable dosage will be in the range of 10 mg to 10 g, preferably 10 mg to 100 mg. A suitable dosage for adults will also be in the range of 5 mg to 500 mg. Similar dosage ranges will be applicable for children. Those skilled in the art will recognize that the optimal dose may be more or less depending upon the patient's body weight, disease, the route of administration, and other factors. Those skilled in the art will also recognize that appropriate dosage levels can be obtained based on results with known oral vaccines such as, for example, a vaccine based on an E. coli lysate (6 mg dose daily up to total of 540 mg) and with an enterotoxigenic E. coli purified antigen (4 doses of 1 mg) (Schulman et al., J. Urol. 150:917–921 (1993); Boedecker et al., American Gastroenterological Assoc. 999:A-222 (1993)). The number of doses will depend upon the disease, the formulation, and efficacy data from clinical trials. Without intending any limitation as to the course of treatment, the treatment can be administered over 3 to 8 doses for a primary immunization schedule over 1 month (Boedeker, American Gastroenterological Assoc. 888:A-222 (1993)).

In a preferred embodiment, a vaccine composition of the invention can be based on a killed whole E. coli preparation with an immunogenic fragment of an S. epidermidis protein of the invention expressed on its surface or it can be based on an E. coli lysate, wherein the killed E. coli acts as a carrier or an adjuvant.

It will be apparent to those skilled in the art that some of the vaccine compositions of the invention are useful only for preventing S. epidermidis infection, some are useful only for treating S. epidermidis infection, and some are useful for both preventing and treating S. epidermidis infection. In a preferred embodiment, the vaccine composition of the invention provides protection against S. epidermidis infection by stimulating humoral and/or cell- mediated immunity against S. epidermidis. It should be understood that amelioration of any of the symptoms of S. epidermidis infection is a desirable clinical goal, including a lessening of the dosage of medication used to treat S. epidermidis-caused disease, or an increase in the production of antibodies in the serum or mucous of patients.

Antibodies Reactive With S. epidermidis Polypeptides

The invention also includes antibodies specifically reactive with the subject S. epidermidis polypeptide. Anti-protein/anti-peptide antisera or monoclonal antibodies can be made by standard protocols (See, for example, Antibodies: A Laboratory Manual ed. by Harlow and Lane (Cold Spring Harbor Press: 1988)). A mammal such as a mouse, a hamster or rabbit can be immunized with an immunogenic form of the peptide. Techniques for conferring immunogenicity on a protein or peptide include conjugation to carriers or other techniques well known in the art. An immunogenic portion of the subject S. epidermidis polypeptide can be administered in the presence of adjuvant. The progress of immunization can be monitored by detection of antibody titers in plasma or serum. Standard ELISA or other immunoassays can be used with the immunogen as antigen to assess the levels of antibodies.

In a preferred embodiment, the subject antibodies are immunospecific for antigenic determinants of the S. epidermidis polypeptides of the invention, e.g. antigenic determinants of a polypeptide of the invention contained in the Sequence Listing, or a closely related human or non-human mammalian homolog (e.g., 90% homologous, more preferably at least about 95% homologous). In yet a further preferred embodiment of the invention, the anti-S. epidermidis antibodies do not substantially cross react (i.e., react specifically) with a protein which is for example, less than 80% percent homologous to a sequence of the invention contained in the Sequence Listing. By “not substantially cross react”, it is meant that the antibody has a binding affinity for a non-homologous protein which is less than 10 percent, more preferably less than 5 percent, and even more preferably less than 1 percent, of the binding affinity for a protein of the invention contained in the Sequence Listing. In a most preferred embodiment, there is no cross-reactivity between bacterial and mammalian antigens.

The term antibody as used herein is intended to include fragments thereof which are also specifically reactive with S. epidermidis polypeptides. Antibodies can be fragmented using conventional techniques and the fragments screened for utility in the same manner as described above for whole antibodies. For example, F(ab′)₂ fragments can be generated by treating antibody with pepsin. The resulting F(ab′)₂ fragment can be treated to reduce disulfide bridges to produce Fab′ fragments. The antibody of the invention is further intended to include bispecific and chimeric molecules having an anti-S. epidermidis portion.

Both monoclonal and polyclonal antibodies (Ab) directed against S. epidermidis polypeptides or S. epidermidis polypeptide variants, and antibody fragments such as Fab′ and F(ab′)₂, can be used to block the action of S. epidermidis polypeptide and allow the study of the role of a particular S. epidermidis polypeptide of the invention in aberrant or unwanted intracellular signaling, as well as the normal cellular function of the S. epidermidis and by microinjection of anti-S. epidermidis polypeptide antibodies of the present invention.

Antibodies which specifically bind S. epidermidis epitopes can also be used in immunohistochemical staining of tissue samples in order to evaluate the abundance and pattern of expression of S. epidermidis antigens. Anti-S. epidermidis polypeptide antibodies can be used diagnostically in immuno-precipitation and immuno-blotting to detect and evaluate S. epidermidis levels in tissue or bodily fluid as part of a clinical testing procedure. Likewise, the ability to monitor S. epidermidis polypeptide levels in an individual can allow determination of the efficacy of a given treatment regimen for an individual afflicted with such a disorder. The level of an S. epidermidis polypeptide can be measured in cells found in bodily fluid, such as in urine samples or can be measured in tissue, such as produced by gastric biopsy. Diagnostic assays using anti-S. epidermidis antibodies can include, for example, immunoassays designed to aid in early diagnosis of S. epidermidis infections. The present invention can also be used as a method of detecting antibodies contained in samples from individuals infected by this bacterium using specific S. epidermidis antigens.

Another application of anti-S. epidermidis polypeptide antibodies of the invention is in the immunological screening of cDNA libraries constructed in expression vectors such as λgt11, λgt11–23, λZAP, and λORF8. Messenger libraries of this type, having coding sequences inserted in the correct reading frame and orientation, can produce fusion proteins. For instance, λgt11 will produce fusion proteins whose amino termini consist of β-galactosidase amino acid sequences and whose carboxy termini consist of a foreign polypeptide. Antigenic epitopes of a subject S. epidermidis polypeptide can then be detected with antibodies, as, for example, reacting nitrocellulose filters lifted from infected plates with anti-S. epidermidis polypeptide antibodies. Phage, scored by this assay, can then be isolated from the infected plate. Thus, the presence of S. epidermidis gene homologs can be detected and cloned from other species, and alternate isoforms (including splicing variants) can be detected and cloned.

Kits Containing Nucleic Acids, Polypeptides or Antibodies of the Invention

The nucleic acid, polypeptides and antibodies of the invention can be combined with other reagents and articles to form kits. Kits for diagnostic purposes typically comprise the nucleic acid, polypeptides or antibodies in vials or other suitable vessels. Kits typically comprise other reagents for performing hybridization reactions, polymerase chain reactions (PCR), or for reconstitution of lyophilized components, such as aqueous media, salts, buffers, and the like. Kits may also comprise reagents for sample processing such as detergents, chaotropic salts and the like. Kits may also comprise immobilization means such as particles, supports, wells, dipsticks and the like. Kits may also comprise labeling means such as dyes, developing reagents, radioisotopes, fluorescent agents, luminescent or chemiluminescent agents, enzymes, intercalating agents and the like. With the nucleic acid and amino acid sequence information provided herein, individuals skilled in art can readily assemble kits to serve their particular purpose. Kits further can include instructions for use.

Bio Chip Technology

The nucleic acid sequence of the present invention may be used to detect S. epidermidis or other species of Staphylococcus acid sequence using bio chip technology. Bio chips containing arrays of nucleic acid sequence can also be used to measure expression of genes of S. epidermidis or other species of Staphylococcus. For example, to diagnose a patient with a S. epidermidis or other Staphylococcus infection, a sample from a human or animal can be used as a probe on a bio chip containing an array of nucleic acid sequence from the present invention. In addition, a sample from a disease state can be compared to a sample from a non-disease state which would help identify a gene that is up-regulated or expressed in the disease state. This would provide valuable insight as to the mechanism by which the disease manifests. Changes in gene expression can also be used to identify critical pathways involved in drug transport or metabolism, and may enable the identification of novel targets involved in virulence or host cell interactions involved in maintenance of an infection. Procedures using such techniques have been described by Brown et al., 1995, Science 270: 467–470.

Bio chips can also be used to monitor the genetic changes of potential therapeutic compounds including, deletions, insertions or mismatches. Once the therapeutic is added to the patient, changes to the genetic sequence can be evaluated for its efficacy. In addition, the nucleic acid sequence of the present invention can be used to determine essential genes in cell cycling. As described in Iyer et al., 1999 (Science, 283:83–87) genes essential in the cell cycle can be identified using bio chips. Furthermore, the present invention provides nucleic acid sequence which can be used with bio chip technology to understand regulatory networks in bacteria, measure the response to environmental signals or drugs as in drug screening, and study virulence induction. (Mons et al., 1998, Nature Biotechnology, 16: 45–48. Patents teaching this technology include U.S. Pat. Nos. 5,445,934, 5,744,305, and 5800992.

Drug Screening Assays Using S. epidermidis Polypeptides

By making available purified and recombinant S. epidermidis polypeptides, the present invention provides assays which can be used to screen for drugs which are either agonists or antagonists of the normal cellular function, in this case, of the subject S. epidermidis polypeptides, or of their role in intracellular signaling. Such inhibitors or potentiators may be useful as new therapeutic agents to combat S. epidermidis infections in humans. A variety of assay formats will suffice and, in light of the present inventions, will be comprehended by the person skilled in the art.

In many drug screening programs which test libraries of compounds and natural extracts, high throughput assays are desirable in order to maximize the number of compounds surveyed in a given period of time. Assays which are performed in cell-free systems, such as may be derived with purified or semi-purified proteins, are often preferred as “primary” screens in that they can be generated to permit rapid development and relatively easy detection of an alteration in a molecular target which is mediated by a test compound. Moreover, the effects of cellular toxicity and/or bioavailability of the test compound can be generally ignored in the in vitro system, the assay instead being focused primarily on the effect of the drug on the molecular target as may be manifest in an alteration of binding affinity with other proteins or change in enzymatic properties of the molecular target. Accordingly, in an exemplary screening assay of the present invention, the compound of interest is contacted with an isolated and purified S. epidermidis polypeptide.

Screening assays can be constructed in vitro with a purified S. epidermidis polypeptide or fragment thereof, such as an S. epidermidis polypeptide having enzymatic activity, such that the activity of the polypeptide produces a detectable reaction product. The efficacy of the compound can be assessed by generating dose response curves from data obtained using various concentrations of the test compound. Moreover, a control assay can also be performed to provide a baseline for comparison. Suitable products include those with distinctive absorption, fluorescence, or chemi-luminescence properties, for example, because detection may be easily automated. A variety of synthetic or naturally occurring compounds can be tested in the assay to identify those which inhibit or potentiate the activity of the S. epidermidis polypeptide. Some of these active compounds may directly, or with chemical alterations to promote membrane permeability or solubility, also inhibit or potentiate the same activity (e.g., enzymatic activity) in whole, live S. epidermidis cells.

Overexpression Assays

Overexpression assays are based on the premise that overproduction of a protein would lead to a higher level of resistance to compounds that selectively interfere with the function of that protein. Overexpression assays may be used to identify compounds that interfere with the function of virtually any type of protein, including without limitation enzymes, receptors, DNA- or RNA-binding proteins, or any proteins that are directly or indirectly involved in regulating cell growth.

Typically, two bacterial strains are constructed. One contains a single copy of the gene of interest, and a second contains several copies of the same gene. Identification of useful inhibitory compounds of this type of assay is based on a comparison of the activity of a test compound in inhibiting growth and/or viability of the two strains. The method involves constructing a nucleic acid vector that directs high level expression of a particular target nucleic acid. The vectors are then transformed into host cells in single or multiple copies to produce strains that express low to moderate and high levels of protein encoding by the target sequence (strain A and B, respectively). Nucleic acid comprising sequences encoding the target gene can, of course, be directly integrated into the host cell.

Large numbers of compounds (or crude substances which may contain active compounds) are screened for their effect on the growth of the two strains. Agents which interfere with an unrelated target equally inhibit the growth of both strains. Agents which interfere with the function of the target at high concentration should inhibit the growth of both strains. It should be possible, however, to titrate out the inhibitory effect of the compound in the overexpressing strain. That is, if the compound is affecting the particular target that is being tested, it should be possible to inhibit the growth of strain A at a concentration of the compound that allows strain B to grow.

Alternatively, a bacterial strain is constructed that contains the gene of interest under the control of an inducible promoter. Identification of useful inhibitory agents using this type of assay is based on a comparison of the activity of a test compound in inhibiting growth and/or viability of this strain under both inducing and non-inducing conditions. The method involves constructing a nucleic acid vector that directs high-level expression of a particular target nucleic acid. The vector is then transformed into host cells that are grown under both non-inducing and inducing conditions (conditions A and B, respectively).

Large numbers of compounds (or crude substances which may contain active compounds) are screened for their effect on growth under these two conditions. Agents that interfere with the function of the target should inhibit growth under both conditions. It should be possible, however, to titrate out the inhibitory effect of the compound in the overexpressing strain. That is, if the compound is affecting the particular target that is being tested, it should be possible to inhibit growth under condition A at a concentration that allows the strain to grow under condition B.

Ligand-Binding Assays

Many of the targets according to the invention have functions that have not yet been identified. Ligand-binding assays are useful to identify inhibitor compounds that interfere with the function of a particular target, even when that function is unknown. These assays are designed to detect binding of test compounds to particular targets. The detection may involve direct measurement of binding. Alternatively, indirect indications of binding may involve stabilization of protein structure or disruption of a biological function. Non-limiting examples of useful ligand-binding assays are detailed below.

A useful method for the detection and isolation of binding proteins is the Biomolecular Interaction Assay (BIAcore) system developed by Pharmacia Biosensor and described in the manufacturer's protocol (LKB Pharmacia, Sweden). The BIAcore system uses an affinity purified anti-GST antibody to immobilize GST-fusion proteins onto a sensor chip. The sensor utilizes surface plasmon resonance which is an optical phenomenon that detects changes in refractive indices. In accordance with the practice of the invention, a protein of interest is coated onto a chip and test compounds are passed over the chip. Binding is detected by a change in the refractive index (surface plasmon resonance).

A different type of ligand-binding assay involves scintillation proximity assays (SPA, described in U.S. Pat. No. 4,568,649).

Another type of ligand binding assay, also undergoing development, is based on the fact that proteins containing mitochondrial targeting signals are imported into isolated mitochondria in vitro (Hurt et al., 1985, Embo J. 4:2061–2068; Eilers and Schatz, Nature, 1986, 322:228–231). In a mitochondrial import assay, expression vectors are constructed in which nucleic acids encoding particular target proteins are inserted downstream of sequences encoding mitochondrial import signals. The chimeric proteins are synthesized and tested for their ability to be imported into isolated mitochondria in the absence and presence of test compounds. A test compound that binds to the target protein should inhibit its uptake into isolated mitochondria in vitro.

Another ligand-binding assay is the yeast two-hybrid system (Fields and Song, 1989, Nature 340:245–246). The yeast two-hybrid system takes advantage of the properties of the GAL4 protein of the yeast Saccharomyces cerevisiae. The GAL4 protein is a transcriptional activator required for the expression of genes encoding enzymes of galactose utilization. This protein consists of two separable and functionally essential domains: an N-terminal domain which binds to specific DNA sequences (UAS_(G)); and a C-terminal domain containing acidic regions, which is necessary to activate transcription. The native GAL4 protein, containing both domains, is a potent activator of transcription when yeast are grown on galactose media. The N-terminal domain binds to DNA in a sequence-specific manner but is unable to activate transcription. The C-terminal domain contains the activating regions but cannot activate transcription because it fails to be localized to UAS_(G). In the two-hybrid system, a system of two hybrid proteins containing parts of GAL4: (1) a GAL4 DNA-binding domain fused to a protein ‘X’ and (2) a GAL4 activation region fused to a protein ‘Y’. If X and Y can form a protein—protein complex and reconstitute proximity of the GAL4 domains, transcription of a gene regulated by UAS_(G) occurs. Creation of two hybrid proteins, each containing one of the interacting proteins X and Y, allows the activation region of UAS_(G) to be brought to its normal site of action.

The binding assay described in Fodor et al., 1991, Science 251:767–773, which involves testing the binding affinity of test compounds for a plurality of defined polymers synthesized on a solid substrate, may also be useful.

Compounds which bind to the polypeptides of the invention are potentially useful as antibacterial agents for use in therapeutic compositions.

Pharmaceutical formulations suitable for antibacterial therapy comprise the antibacterial agent in conjunction with one or more biologically acceptable carriers. Suitable biologically acceptable carriers include, but are not limited to, phosphate-buffered saline, saline, deionized water, or the like. Preferred biologically acceptable carriers are physiologically or pharmaceutically acceptable carriers.

The antibacterial compositions include an antibacterial effective amount of active agent. Antibacterial effective amounts are those quantities of the antibacterial agents of the present invention that afford prophylactic protection against bacterial infections or which result in amelioration or cure of an existing bacterial infection. This antibacterial effective amount will depend upon the agent, the location and nature of the infection, and the particular host. The amount can be determined by experimentation known in the art, such as by establishing a matrix of dosages and frequencies and comparing a group of experimental units or subjects to each point in the matrix.

The antibacterial active agents or compositions can be formed into dosage unit forms, such as for example, creams, ointments, lotions, powders, liquids, tablets, capsules, suppositories, sprays, aerosols or the like. If the antibacterial composition is formulated into a dosage unit form, the dosage unit form may contain an antibacterial effective amount of active agent. Alternatively, the dosage unit form may include less than such an amount if multiple dosage unit forms or multiple dosages are to be used to administer a total dosage of the active agent. Dosage unit forms can include, in addition, one or more excipient(s), diluent(s), disintegrant(s), lubricant(s), plasticizer(s), colorant(s), dosage vehicle(s), absorption enhancer(s), stabilizer(s), bactericide(s), or the like.

For general information concerning formulations, see, e.g., Gilman et al. (eds.), 1990, Goodman and Gilman's: The Pharmacological Basis of Therapeutics, 8th ed., Pergamon Press; and Remington's Pharmaceutical Sciences, 17th ed., 1990, Mack Publishing Co., Easton, Pa.; Avis et al. (eds.), 1993, Pharmaceutical Dosage Forms: Parenteral Medications, Dekker, New York; Lieberman et al (eds.), 1990, Pharmaceutical Dosage Forms: Disperse Systems, Dekker, New York.

The antibacterial agents and compositions of the present invention are useful for preventing or treating S. epidermidis infections. Infection prevention methods incorporate a prophylactically effective amount of an antibacterial agent or composition. A prophylactically effective amount is an amount effective to prevent S. epidermidis infection and will depend upon the specific bacterial strain, the agent, and the host. These amounts can be determined experimentally by methods known in the art and as described above.

S. epidermidis infection treatment methods incorporate a therapeutically effective amount of an antibacterial agent or composition. A therapeutically effective amount is an amount sufficient to ameliorate or eliminate the infection. The prophylactically and/or therapeutically effective amounts can be administered in one administration or over repeated administrations. Therapeutic administration can be followed by prophylactic administration, once the initial bacterial infection has been resolved.

The antibacterial agents and compositions can be administered topically or systemically. Topical application is typically achieved by administration of creams, ointments, lotions, or sprays as described above. Systemic administration includes both oral and parental routes. Parental routes include, without limitation, subcutaneous, intramuscular, intraperitoneal, intravenous, transdermal, inhalation and intranasal administration.

Exemplification

Cloning and Sequencing S. epidermidis Genomic Sequence

This invention provides nucleotide sequences of the genome of S. epidermidis which thus comprises a DNA sequence library of S. epidermidis genomic DNA. The invention also provides nucleotide sequences of two naturally occurring plasmids in S. epidermidis. The detailed description that follows provides nucleotide sequences of S. epidermidis, and also describes how the sequences were obtained and how ORFs (Open Reading Frames) and protein-coding sequences can be identified. Also described are methods of using the disclosed S. epidermidis sequences in methods including diagnostic and therapeutic applications. Furthermore, the library can be used as a database for identification and comparison of medically important sequences in this and other strains of S. epidermidis as well as other species of Staphylococcus.

Chromosomal DNA from strain 18972 of S. epidermidis, was isolated using a protocol described by Storrs, et al. (J. Bacteriol. 173: 4347–4352 (1991). The only exception to this protocol was that lysostaphin (120 U/ml) was used instead of lysozyme. Two endogenous plasmids of approximately 39 Kb and 2.9 Kb in size were identified upon visualization of the S. epidermidis genomic DNA on a 0.5% agarose gel. The first library constructed contained fragments from the S. epidermidis genome as well as from the endogenous plasmid. A second library was later constructed with genomic DNA, from which the plasmid DNA was removed by CsCl centrifugation. The genomic DNA prep involved a lysozyme:lysostaphin digestion, sodium dodecyl sulfate lysis, Proteinase K and RNase treatment, phenol:chloroform extraction, and sodium acetate precipitation, followed by the CsCl gradient to remove the plasmid.

In the construction of both libraries, genomic S. epidermidis DNA was hydrodynamically sheared in an HPLC and then separated on a standard 1% agarose gel. A fraction corresponding to 2000–3000 bp in length was excised from the gel and purifed by the GeneClean procedure (Biol101, Inc.).

The purified DNA fragments were then blunt-ended using T4 DNA polymerase. The healed DNA was then ligated to unique BstXI-linker adapters (5′-GTCTTCACCACGGGG-3′ and 5′-GTGGTGAAGAC-3′ in 100–1000 fold molar excess). These linkers are complimentary to the BstXI-cut pGTC vector, while the overhang is not self-complimentary. Therefore, the linkers will not concatermerize nor will the cut-vector religate itself easily. The linker-adapted inserts were separated from the unincorporated linkers on a 1% agarose gel and purified using GeneClean. The linker-adapted inserts were then ligated to BstXI-cut vector to construct a “shotgun” sublclone libraries.

Only major modifications to the protocols are highlighted. Briefly, the library was then transformed into DH5ácompetent cells (Gibco/BRL, DH5α transformation protocol). It was assessed by plating onto antibiotic plates containing ampicillin and IPTG/Xgal. The plates were incubated overnight at 37° C. Transformants were then used for plating of clones and picking for sequencing. The cultures were grown overnight at 37° C. DNA was purified using a silica bead DNA preparation (Engelstein, 1996) method. In this manner, 25 μg of DNA was obtained per clone.

These purified DNA samples were then sequenced using primarily ABI dye-terminator chemistry. All subsequent steps were based on sequencing by ABI377 automated DNA sequencing methods. The ABI dye terminator sequence reads were run on ABI377 machines and the data was transferred to UNIX machines following lane tracking of the gels. Base calls and quality scores were determined using the program PHRED (Ewing et al., 1998, Genome Res. 8: 175–185; Ewing and Green, 1998, Genome Res. 8: 685–734). Reads were assembled using PHRAP (P. Green, Abstracts of DOE Human Genome Program Contractor- Grantee Workshop V, January 1996, p. 157) with default program parameters and quality scores.

Finishing followed the initial assembly. Missing mates (sequences from clones that only gave reads from one end of the Staphylococcus DNA inserted in the plasmid) were identified and sequenced with ABI technology to allow the identification of additional overlapping contigs.

End-sequencing of randomly picked genomic lambda was also performed. Sequencing of both sides was done for all lambda sequences. The lambda library backbone helped to verify the integrity of the assembly and allowed closure of some of the physical gaps. Primers for walking off the ends of contigs would be selected using pick_primer (a GTC program) near the ends of the clones to facilitate gap closure. These walks can be sequenced using the selected clones and primers. These data are then reassembled with PHRAP. Additional sequencing using PCR-generated templates and screened and/or unscreened lambda templates can be done in addition.

Additional templates for the physical gaps were obtained through PCR using primers designed from the ends of the contigs. These templates were then used in sequencing reactions to close the gaps. Contigs were ordered by aligning identified S. epidermidis genes to the published physical maps. Order was confirmed by PCR. The final chromosomal assembly included 23 ordered contigs and the two plasmids each contained 1 contig each.

To identify S. epidermidis polypeptides the complete genomic sequence of S. epidermidis were analyzed essentially as follows: First, all possible stop-to-stop open reading frames (ORFs) greater than 180 nucleotides in all six reading frames were translated into amino acid sequences. Second, the identified ORFs were analyzed for homology to known (archeabacter, prokaryotic and eukaryotic) protein sequences. Third, the coding potential of non-homologous sequences were evaluated with the program GENEMARK™ (Borodovsky and McIninch, 1993, Comp. Chem. 17:123).

Identification, Cloning and Expression of S. epidermidis Nucleic Acids

Expression and purification of the S. epidermidis polypeptides of the invention can be performed essentially as outlined below.

To facilitate the cloning, expression and purification of membrane and secreted proteins from S. epidermidis a gene expression system, such as the pET System (Novagen), for cloning and expression of recombinant proteins in E. coli, is selected. Also, a DNA sequence encoding a peptide tag, the His-Tag, is fused to the 3′ end of DNA sequences of interest in order to facilitate purification of the recombinant protein products. The 3′ end is selected for fusion in order to avoid alteration of any 5′ terminal signal sequence.

PCR Amplification and Cloning of Nucleic Acids Containing ORF's Encoding Enzymes

Nucleic acids chosen (for example, from the nucleic acids set forth in SEQ ID NO: 1–SEQ ID. NO: 3772 for cloning from the 18972 strain of S. epidermidis and plasmids are prepared for amplification cloning by polymerase chain reaction (PCR). Synthetic oligonucleotide primers specific for the 5^(/) and 3^(/) ends of open reading frames (ORFs) are designed and purchased from GibcoBRL Life Technologies (Gaithersburg, Md., USA). All forward primers (specific for the 5^(/) end of the sequence) are designed to include an NcoI cloning site at the extreme 5^(/) terminus. These primers are designed to permit initiation of protein translation at a methionine residue followed by a valine residue and the coding sequence for the remainder of the native S. epidermidis DNA sequence. All reverse primers (specific for the 3^(/) end of any S. epidermidis ORF) include a EcoRI site at the extreme 5^(/) terminus to permit cloning of each S. epidermidis sequence into the reading frame of the pET-28b. The pET-28b vector provides sequence encoding an additional 20 carboxy-terminal amino acids including six histidine residues (at the extreme C-terminus), which comprise the His-Tag.

Genomic DNA or plasmid DNA prepared from the 18972 strain of S. epidermidis is used as the source of template DNA for PCR amplification reactions (Current Protocols in Molecular Biology, John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994). To amplify a DNA sequence containing an S. epidermidis ORF, genomic DNA (50 nanograms) is introduced into a reaction vial containing 2 mM MgCl₂, 1 micromolar synthetic oligonucleotide primers (forward and reverse primers) complementary to and flanking a defined S. epidermidis ORF, 0.2 mM of each deoxynucleotide triphosphate; dATP, dGTP, dCTP, dTTP and 2.5 units of heat stable DNA polymerase (Amplitaq, Roche Molecular Systems, Inc., Branchburg, N.J., USA) in a final volume of 100 microliters.

Upon completion of thermal cycling reactions, each sample of amplified DNA is washed and purified using the Qiaquick Spin PCR purification kit (Qiagen, Gaithersburg, Md., USA). All amplified DNA samples are subjected to digestion with the restriction endonucleases, e.g., NcoI and EcoRI (New England BioLabs, Beverly, Mass., USA)(Current Protocols in Molecular Biology, John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994). DNA samples are then subjected to electrophoresis on 1.0% NuSeive (FMC BioProducts, Rockland, Me. USA) agarose gels. DNA is visualized by exposure to ethidium bromide and long wave uv irradiation. DNA contained in slices isolated from the agarose gel is purified using the Bio 101 GeneClean Kit protocol (Bio 101 Vista, Calif., USA).

Cloning of S. epidermidis Nucleic Acids into an Expression Vector

The pET-28b vector is prepared for cloning by digestion with restriction endonucleases, e.g., NcoI and EcoRI (Current Protocols in Molecular Biology, John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994). The pET-28a vector, which encodes a His-Tag that can be fused to the 5^(/) end of an inserted gene, is prepared by digestion with appropriate restriction endonucleases.

Following digestion, DNA inserts are cloned (Current Protocols in Molecular Biology, John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994) into the previously digested pET-28b expression vector. Products of the ligation reaction are then used to transform the BL21 strain of E. coli (Current Protocols in Molecular Biology, John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994) as described below.

Transformation of Competent Bacteria with Recombinant Plasmids

Competent bacteria, E coli strain BL21 or E. coli strain BL21 (DE3), are transformed with recombinant pET expression plasmids carrying the cloned S. epidermidis sequences according to standard methods (Current Protocols in Molecular; John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994). Briefly, 1 microliter of ligation reaction is mixed with 50 microliters of electrocompetent cells and subjected to a high voltage pulse, after which, samples are incubated in 0.45 milliliters SOC medium (0.5% yeast extract, 2.0% tryptone, 10 mM NaCl, 2.5 mM KCl, 10 mM MgCl2, 10 mM MgSO4 and 20, mM glucose) at 37

C with shaking for 1 hour. Samples are then spread on LB agar plates containing 25 microgram/ml kanamycin sulfate for growth overnight. Transformed colonies of BL21 are then picked and analyzed to evaluate cloned inserts as described below.

Identification of Recombinant Expression Vectors with S. epidermidis Nucleic Acids

Individual BL21 clones transformed with recombinant pET-28b S. epidermidis ORFs are analyzed by PCR amplification of the cloned inserts using the same forward and reverse primers, specific for each S. epidermidis sequence, that were used in the original PCR amplification cloning reactions. Successful amplification verifies the integration of the S. epidermidis sequences in the expression vector (Current Protocols in Molecular Biology, John Wiley and Sons, Inc., F. Ausubel et al., eds., 1994).

Isolation and Preparation of Nucleic Acids from Transformants

Individual clones of recombinant pET-28b vectors carrying properly cloned S. epidermidis ORFs are picked and incubated in 5 mls of LB broth plus 25 microgram/ml kanamycin sulfate overnight. The following day plasmid DNA is isolated and purified using the Qiagen plasmid purification protocol (Qiagen Inc., Chatsworth, Calif., USA).

Expression Of Recombinant S. epidermidis Sequences In E. coli

The pET vector can be propagated in any E. coli K-12 strain e.g. HMS 174, HB101, JM109, DH5, etc. for the purpose of cloning or plasmid preparation. Hosts for expression include E. coli strains containing a chromosomal copy of the gene for T7 RNA polymerase. These hosts are lysogens of bacteriophage DE3, a lambda derivative that carries the lacI gene, the lacUV5 promoter and the gene for T7 RNA polymerase. T7 RNA polymerase is induced by addition of isopropyl-B-D-thiogalactoside (IPTG), and the T7 RNA polymerase transcribes any target plasmid, such as pET-28b, carrying its gene of interest. Strains used include: BL21(DE3) (Studier, F. W., Rosenberg, A. H., Dunn, J. J., and Dubendorff, J. W. (1990) Meth. Enzymol. 185, 60–89).

To express recombinant S. epidermidis sequences, 50 nanograms of plasmid DNA isolated as described above is used to transform competent BL21 (DE3) bacteria as described above (provided by Novagen as part of the pET expression system kit). The lacZ gene (beta- galactosidase) is expressed in the pET-System as described for the S. epidermidis recombinant constructions. Transformed cells are cultured in SOC medium for 1 hour, and the culture is then plated on LB plates containing 25 micrograms/ml kanamycin sulfate. The following day, bacterial colonies are pooled and grown in LB medium containing kanamycin sulfate (25 micrograms/ml) to an optical density at 600 nM of 0.5 to 1.0 O.D. units, at which point, 1 millimolar IPTG was added to the culture for 3 hours to induce gene expression of the S. epidermidis recombinant DNA constructions.

After induction of gene expression with IPTG, bacteria are pelleted by centrifugation in a Sorvall RC-3B centrifuge at 3500×g for 15 minutes at 4° C. Pellets are resuspended in 50 milliliters of cold 10 mM Tris-HCl, pH 8.0, 0.1 M NaCl and 0.1 mM EDTA (STE buffer). Cells are then centrifuged at 2000×g for 20 min at 4° C. Wet pellets are weighed and frozen at −80° C. until ready for protein purification.

A variety of methodologies known in the art can be utilized to purify the isolated proteins. (Current Protocols in Protein Science, John Wiley and Sons, Inc., J. E. Coligan et al., eds., 1995). For example, the frozen cells may be thawed, resupended in buffer and ruptured by several passages through a small volume microfluidizer (Model M-110S, Microfluidics International Corporation, Newton, Mass.). The resultant homogenate may be centrifuged to yield a clear supernatant (crude extract) and following filtration the crude extract may be fractionated over columns. Fractions may be monitored by absorbance at OD₂₈₀ nm. and peak fractions may analyzed by SDS-PAGE.

The concentrations of purified protein preparations may be quantified spectrophotometrically using absorbance coefficients calculated from amino acid content (Perkins, S. J. 1986 Eur. J. Biochem. 157, 169–180). Protein concentrations are also measured by the method of Bradford, M. M. (1976) Anal. Biochem. 72, 248–254, and Lowry, O. H., Rosebrough, N., Farr, A. L. & Randall, R. J. (1951) J. Biol. Chem. 193, pages 265–275, using bovine serum albumin as a standard.

SDS-polyacrylamide gels of various concentrations may be purchased from BioRad (Hercules, Calif., USA), and stained with Coomassie blue. Molecular weight markers may include rabbit skeletal muscle myosin (200 kDa), E. coli (-galactosidase (116 kDa), rabbit muscle phosphorylase B (97.4 kDa), bovine serum albumin (66.2 kDa), ovalbumin (45 kDa), bovine carbonic anhydrase (31 kDa), soybean trypsin inhibitor (21.5 kDa), egg white lysozyme (14.4 kDa) and bovine aprotinin (6.5 kDa).

Equivalents

Those skilled in the art will recognize, or be able to ascertain using no more than routine experimentation, many equivalents to the specific embodiments and methods described herein. The specific embodiments described herein are offered by way of example only, and the invention is to limited only by the terms of the appended claims, along with the full scope of equivalents to which such claims are entitled.

TABLE 2 ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_10192177_f1_14 1 3773 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_10578392_f2_146 2 3774 510 169 525 1.7e-50 Description gp:[GI:g2735511] [LN:SCU96108] [AC:U96108] [PN:YwpF homolog] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus (3R)-hydroxymyristoyl acyl carrier proteindehydrase homolog (fabZ) gene, partial cds, YwpF homolog, single-strand binding protein homolog (ssb), SceD precursor (sceD), SceA precursor (sceA) and SceE precursor (sceE) genes, complete cds, and TenA homolog (tenA) gene, partial cds.] [NT:Orf2; similar to B. subtilis YwpF protein encoded] [LE:219] [RE:668] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_10632763_f1_106 3 3775 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_10739063_c1_376 4 3776 693 230 601 1.5e-58 Description gp:[GI:g2735513] [LN:SCU96108] [AC:U96108] [PN:SceD precursor] [GN:sceD] OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus (3R)-hydroxymyristoyl acyl carrier proteindehydrase homolog (fabZ) gene, partial cds, YwpF homolog, single-strand binding protein homolog (ssb), SceD precursor (sceD), SceA precursor (sceA) and SceE precursor (sceE) genes, complete cds, and TenA homolog (tenA) gene, partial cds.] [NT:secreted protein] [LE:1825] [RE:2523] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_10939577_f1_79 5 3777 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1206255_f2_219 6 3778 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_12111018_f3_297 7 3779 426 141 174 2.7e-13 Description gp:[GI:g642965] [LN:ABCARRA] [AC:X70360] [GN:carR] [OR:Azospirillum brasilense] [DB:genpept-bct1] [DE:A. brasilense carR gene.] [NT:ORF2] [LE:59] [RE:580] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_12142768_f1_110 8 3780 300 99 110 4.2e-06 Description pir:[LN:D71245] [AC:D71245] [PN:hypothetical protein PH0221] [GN:PH0221] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030234:g3256608] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:235aa long hypothetical protein] [GN:PH0221] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:194212] [RE:194919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1250_c3_509 9 3781 714 237 644 4.2e-63 Description gp:[GI:g2735516] [LN:SCU96108] [AC:U96108] [PN:TenA homolog] [GN:tenA] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus (3R)-hydroxymyristoyl acyl carrier proteindehydrase homolog (fabZ) gene, partial cds, YwpF homolog, single-strand binding protein homolog (ssb), SceD precursor (sceD), SceA precursor (sceA) and SceE precursor (sceE) genes, complete cds, and TenA homolog (tenA) gene, partial cds.] [NT:similar to TenA of B. subtilis, encoded by GenBank] [LE:4569] [RE:>5086] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_12587886_f1_33 10 3782 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1281557_c3_517 11 3783 1131 376 903 1.5e-90 Description sp:[LN:DDL_BACSU] [AC:P96612] [GN:DDLA:DDL] [OR:BACILLUS SUBTILIS] [EC:6.3.2.4] [DE:D-ALANINE- -D-ALANINE LIGASE, (D-ALANYLALANINE SYNTHETASE)] [SP:P96612] [DB:swissprot] >pir:[LN:D69613] [AC:D69613] [PN:D-alanyl-D-alanine ligase A ddlA] [GN:ddlA] [CL:D-alanine- -D-alanine ligase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020046:g1881266] [LN:AB001488] [AC:AB001488] [PN:PROBABLE D-ALANINE- -D-ALANINE LIGASE A] [GN:ddlA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [EC:6.3.2.4] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [LE:41311] [RE:42375] [DI:direct] >gp:[GI:e1182422:g2632756] [LN:BSUB0003] [AC:Z99106:AL009126] [PN:D-alanyl-D-alanine ligase A] [GN:ddlA] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.2.4] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [SP:P96612] [LE:105055] [RE:106119] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1292842_c2_415 12 3784 672 223 790 1.4e-78 Description gp:[GI:d1037675:g4126674] [LN:AB016431] [AC:AB016431] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:912) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus, zinc responsible operon czr genes, complete and partial cds.] [NT:Hypothetical protein] [LE:2175] [RE:2813] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_12_f1_1 13 3785 243 80 75 0.0084 Description pir:[LN:A44803] [AC:A44803] [PN:pG1 protein] [OR:Homo sapiens] [SR:, man] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1366660_c3_484 14 3786 1215 404 566 7.8e-55 Description pir:[LN:A70842] [AC:A70842 ] [PN:probable amiB protein] [GN:amiB] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e1251137:g2894215] [LN:MTV016] [AC:AL021841:AL123456] [PN:amiB] [GN:amiB] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 143/162.] [NT:Rv3306c, (MTV016.05c), len:394. amiB, Probable] [LE:3363] [RE:4547] [DI:complement] >gp:[GI:e1251137:g2894215] [LN:MTV016] [AC:AL021841:AL123456] [PN:amiB] [GN:amiB] [OR:Mycobacterium tuberculosis] [DB:genpept] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 143/162.] [NT:Rv3306c, (MTV016.05c), len:394. amiB, Probable] [LE:3363] [RE:4547] [DI:complement) ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_13790952_c2_422 15 3787 1194 397 1350 6.5e-138 Description pir:[LN:B69619] [AC:B69619] [PN:phosphodeoxyribomutase drm] [GN:drm] [CL:phosphopentomutase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013330:g1303995] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqkN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:271220] [RE:272404] [DI:direct] >gp:[GI:e1185619:g2634785] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:phosphodeoxyribomutase] [GN:drm] [FN:conversion of ribose-1-P/deoxyribose-1-P to] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:5.4.2.7] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:alternate gene name:yqkN] [SP:P46353] [LE:51215] [RE:52399] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1415877_c2_413 16 3788 912 303 201 3.7e-16 Description gp:[GI:g4982462] [LN:AE001824] [AC:AE001824:AE000512] [PN:conserved hypothetical protein] [GN:TM1876] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 136 of 136 of the complete genome.] [NT:similar to GB:Pyro_h percent identity:60.17;] [LE:4717] [RE:5481] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14160455_c2_466 17 3789 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14225327_f1_91 18 3790 1029 342 1252 1.6e-127 Description gp:[GI:d1037673:g4126672] [LN:AB016431] [AC:AB016431] [GN:czrB] [FN:Zinc resistance] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:912) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus, zinc responsible operon czr genes, complete and partial cds.] [NT:czcD] [LE:724] [RE:1701] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_1438927_c1_356 19 3791 1686 561 2118 2.7e-219 Description sp:[LN:PYRG_BACSU] [AC:P13242] [GN:CTRA] [OR:BACILLUS SUBTILIS] [EC:6.3.4.2] [DE:CTP SYNTHASE, (UTP- -AMMONIA LIGASE) (CTP SYNTHETASE)] [SP:P13242) [DB:swissprot] >pir:[LN:SYBSTP] [AC:A32354:S55423:C69610] [PN:CTP synthase, :CTP-synthetase:UTP- -ammonia ligase] [GN:ctrA:pyrG] [CL:CTP synthase] [OR:Bacillus subtilis] [EC:6.3.4.2] [DB:pir1] [MP:37 min] >gp:[GI:g143597] [LN:BACSPO0FA] [AC:M22039] [PN:CTP synthetase] [GN:ctrA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strains JH642 and UOT0550) DNA] [DB:genpept-bct1] [DE:Bacillus subtillis spo0F, CTP synthetase (ctrA), and fructose-bisphosphate aldolase (orfY-tsr) genes, complete cds.] [LE:339] [RE:1946] [DI:direct] >gp:[GI:g853762] [LN:BSDNA320D] [AC:Z49782] [PN:CTP synthase] [GN:pyrG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [SP:P13242] [LE:9480] [RE:11087] [DI:direct] >gp:[GI:e1186216:g2636252] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:CTP synthetase] [GN:ctrA] [FN:pyrimidine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.4.2] [DE:Bacillus subtilis complete genome (section 20 of 21) from 3798401 to 4010550.] [NT:alternate gene name: pyrG] [SP:P13242] [LE:11346] [RE:12953] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14454660_f1_26 20 3792 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14492142_f1_81 21 3793 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14634450_f2_208 22 3794 171 56 52 0.029 Description pir:[LN:H71683] [AC:H71683] [PN:hypothetical protein RP285] [GN:RP285] [OR:Rickettsia prowazekii] [DB:pir2] >gp:[GI:e1342590:g3860846] [LN:RPXX02] [AC:AJ235271:AJ235269] [PN:unknown] [GN:RP285] [OR:Rickettsia prowazekii] [DB:genpept-bct1] [DE:Rickettsia prowazekii strain Madrid E, complete genome; segment 2/4.] [LE:68773] [RE:69213] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14849093_c3_469 23 3795 294 97 133 6.0e-09 Description pir:[LN:F71245] [AC:F71245] [PN:hypothetical protein PHS004] [GN:PHS004] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030236:g3256610] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:58aa long hypothetical protein] [GN:PHS004] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [NT:similar to GENPEPT:Z47547 percent identity:50.000] [LE:195255] [RE:195431] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_14855051_c1_401 24 3796 471 156 409 3.4e-38 Description pir:[LN:H69773] [AC:H69773] [PN:conserved hypothetical protein ydcK] [GN:ydcK] [CL:hypothetical protein HI1173] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020070:g1881290] [LN:AB001488] [AC:AB001488] [GN:ydcK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:61365] [RE:61817] [DI:direct] >gp:[GI:e1182445:g2632779] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydcK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21) from 402751 to 611850.] [NT:similar to hypothetical proteins] [LE:125110] [RE:125562] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_15798901_c3_471 25 3797 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_16251305_c3_501 26 3798 786 261 724 1.4e-71 Description sp:[LN:ATP6_BACST] [AC:P42010] [GN:ATPB] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:3.G.1.34] [DE:ATP SYNTHASE A CHAIN, (PROTEIN 6)] [SP:P42010] [DB:swissprot] >gp:[GI:d1007828:g534857] [LN:BACATPSAC] [AC:D38059] [PN:ATPase subunit a] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain IFO1035) (library:library o] [DB:genpept-bct1] [DE:Bacillus stearothermophilus genes for ATPase subunits a and c, complete cds.] [LE:256] [RE:966] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_165888_f3_321 27 3799 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_19693831_c1_350 28 3800 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_19728433_f2_133 29 3801 1215 404 691 4.4e-68 Description sp:[LN:YWCF_BACSU] [AC:P39604] [GN:YWCF:IPA-42D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 43.3 KD PROTEIN IN QOXD-VPR INTERGENIC REGION] [SP:P39604] [DB:swissprot] >pir:[LN:S39697] [AC:S39697:A70053] [PN:cell-division protein homolog ywcF:protein ipa-42d] [GN:ywcF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413966] [LN:BSGENR] [AC:X73124] [GN:ipa-42d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39604] [LE:44053] [RE:45234] [DI:direct] >gp:[GI:e1186311:g2636347] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywcF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-42d; similar to] [SP:P39604] [LE:112728] [RE:113909] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_19739675_c3_494 30 3802 636 211 638 1.8e-62 Description sp:[LN:KITH_BACSU] [AC:Q03221] [GN:TDK] [OR:BACILLUS SUBTILIS] [EC:2.7.1.21] [DE:THYMIDINE KINASE,] [SP:Q03221] [DB:swissprot] >pir:[LN:S55432] [AC:S55432:D69721] [PN:thymidine kinase, tdk] [GN:tdk] [CL:thymidine kinase] [OR:Bacillus subtilis] [EC:2.7.1.21] [DB:pir2] >gp:[GI:g405819] [LN:BACRHOTDKX] [AC:M97678] [PN:thymidine kinase] [GN:tdk] [OR:Bacillus subtilis] [SR:Bacillus subtilis (Transposon Tn917 insertional library) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis OrfR, 3′ end; OrfQ; transcriptional terminator(rho) gene; ribosomal protein L31; thymidine kinase (tdk) gene, complete cds.] [NT:Incorrect sequence given in Quirk et al. citation,] [LE:3334] [RE:39211] [DI:direct] >gp:[GI:g853771] [LN:BSDNA320D] [AC:Z49782] [PN:thymidine kinase] [GN:tdk] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [SP:Q03221] [LE:18786] [RE:19373] [DI:direct] >gp:[GI:e1184612:g2636231] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:thymidine kinase] [GN:tdk] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.21] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:Q03221] [LE:204370] [RE:204957] [DI:complement] >gp:[GI:e1186207:g2636243] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:thymidine kinase] [GN:tdk] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.21] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [SP:Q03221] [LE:3060] [RE:3647] [DI:complement] >gp:[GI:e1184612:g2636231] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:thymidine kinase] [GN:tdk] [OR:Bacillus subtilis] [DB:genpept] [EC:2.7.1.21] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:Q03221] [LE:204370] [RE:204957] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20032527_f2_127 31 3803 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20156686_c3_498 32 3804 573 190 415 7.8e-39 Description sp:[LN:YWLG_BACSU] [AC:P39157] [GN:YWLG:IPC-33D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 19.4 KD PROTEIN IN SPOIIR-GLYC INTERGENIC REGION] [SP:P39157] [DB:swissprot] >pir:[LN:I40482] [AC:I40482:D70062:S49362] [PN:hypothetical protein ywlG:ipc-33d protein] [GN:ywlG:ipc-33d [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g556885] [LN:BSSPORUPP] [AC:Z38002] [PN:Unknown] [GN:ipc-33d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis spoII-R, glyc and upp genes.] [SP:P39157] [LE:4750] [RE:5292] [DI:direct] >gp:[GI:e1184597:g2636216] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywlG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:ipc-33d] [SP:P39157] [LE:192609] [RE:193151] [DI:complement] >gp:[GI:e1184597:g2636216] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywlG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:ipc-33d] [SP:P39157] [LE:192609] [RE:193151] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20348453_c3_518 33 3805 1587 528 1226 9.0e-125 Description gp:[GI:g4409804] [LN:AF091502] [AC:AF091502] [PN:autoaggregation-mediating protein] [GN:aggH] [OR:Lactobacillus reuteri] [DB:genpept-bct2] [DE:Lactobacillus reuteri autoaggregation-mediating protein (aggH)gene, complete cds.] [NT:AggH; putative extracellular DEAD-box RNA helicase] [LE:181] [RE:1674] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20360687_c3_516 34 3806 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20569052_c2_457 35 3807 327 108 198 7.8e-16 Description pir:[LN:G70041] [AC:G70041] [PN:conserved hypothetical protein yvgZ] [GN:yvgZ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186040:g2635865] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgZ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:43408] [RE:43713] [DI:complement) ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20572255_f1_34 36 3808 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_20900062_f2_215 37 3809 147 48 53 0.045 Description gp:[GI:g1086838] [LN:CELF10E7] [AC:U41264] [GN:F10E7.2] [OR:Caenorhabditis elegans] [SR: Caenorhabditis elegans strain = Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F10E7.] [NT:also contains weak similarity to a C2H2-type zinc] [LE:21609:21709:23024:23277] [RE:21661:21796:23149:23753] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2117125_c2_432 38 3810 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2125637_f3_335 39 3811 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_21517182_f3_322 40 3812 375 124 396 8.1e-37 Description gp:[GI:d1037674:g4126673] [LN:AB01643l] [AC:AB016431] [GN:CzrA] [FN:repressor] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:912) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus, zinc responsible operon czr genes, complete and partial cds.] [LE:1703] [RE:2023] [DI:complement] >gp:[GI:g3445566] [LN:AF044951] [AC:AF044951] [PN:repressor protein] [GN:rzcA] [FN:zinc and cobalt transport repressor] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus repressor protein (rzcA) and transportprotein (rzcB) genes, complete cds.] [LE:193] [RE:513] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_21562827_f3_306 41 3813 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_21756937_c1_379 42 3814 672 223 401 2.4e-37 Description sp:[LN:THIE_BACSU] [AC:P39594] [GN:THIE:THIC:IPA-26D] [OR:BACILLUS SUBTILIS] [EC:2.5.1.3] [DE:PYROPHOSPHORYLASE) (TMP-PPASE) (THIAMIN-PHOSPHATE SYNTHASE)] [SP:P39594] [DB:swissprot] >pir:[LN:S39681] [AC:539681:E69722] [PN:thiamin-phosphate pyrophosphorylase, thiC:protein ipa-26d] [GN:thiC] [CL:thiE protein:thiamin-phosphate pyrophosphorylase homology] [OR:Bacillus subtilis] [EC:2.5.1.3] [DB:pir2] >gp:[GI:g413950] [LN:BSGENR] [AC:X73124] [GN:ipa-26d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39594] [LE:26188] [RE:26856] [DI:direct] >gp:[GI:e1186328:g2636364] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:thiamine-phosphate pyrophosphorylase] [GN:thiC] [FN:substitution of the pyrophosphate of] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.5.1.3] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-26d, ywbK] [SP:P39594] [LE:131103] [RE:131771] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2230303_f3_265 43 3815 669 222 346 1.6e-31 Description sp:[LN:YPGQ_BACSU] [AC:P54168] [GN:YPGQ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 23.1 KD PROTEIN IN BSAA-ILVD INTERGENIC REGION] [SP:P54168] [DB:swissprot] >pir:[LN:E69935] [AC:E69935] [PN:conserved hypothetical protein ypgQ] [GN:ypgQ] [CL:conserved hypothetical protein AF0994] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256633] [LN:BACYACA] [AC:L77246] [GN:ypgQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:putative] [LE:16914] [RE:17531] [DI:direct] >gp:[GI:e1183636:g2634609] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypgQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to hypothetical proteins] [SP:P54168] [LE:107621] [RE:108238] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_22460882_c3_482 44 3816 687 228 612 1.0e-59 Description gp:[GI:e1191863:g809660] [LN:BSDNPOP] [AC:X82174] [PN:deoxyribose-phosphate aldolase] [GN:dra] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.2.4] [DE:B. subtilis operon contg. dra, nupC and pdp genes.] [SP:P39121] [LE:1462] [RE:2106] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_22692137_c2_464 45 3817 486 161 688 9.2e-68 Description gp:[GI:e279934:g1934990] [LN:SASIGFACB] [AC:Y07645] [GN:rsbW] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus sigB gene.] [LE:2220] [RE:2699] [DI:direct] >gp:[GI:e284999:g1729796] [LN:SAUSIGB] [AC:Y09929] [GN:rsbW] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus rsbU, rsbV, rsbW & sigB genes.] [LE:2233] [RE:2712] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23437803_c3_523 46 3818 2187 728 1827 1.9e-188 Description gp:[GI:e279936:g1934992] [LN:SASIGFACB] [AC:Y07645] [GN:ORF6] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus sigB gene.] [LE:3878] [RE:>5272] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23439002_c2_417 47 3819 1404 467 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23446887_f3_323 48 3820 1155 384 548 6.3e-53 Description gp:[GI:g4097757] [LN:SAU67965] [AC:U67965] [PN:lytic regulatory protein] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus lytic regulatory protein gene, complete cds.] [LE:712] [RE:1824] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23594057_c1_362 49 3821 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23595137_c3_480 50 3822 501 166 423 1.1e-39 Description pir:[LN:H69618] [AC:H69618] [PN:Stress- and starvation-induced gene controlled by sigma-B dps] [GN:dps] [CL:hypothetical protein HI1349] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185938:g2635549] [LN:BSUB0016] [AC:Z9912.9:AL009126] [GN:dps] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:alternate gene name:ytkB; stress- and] [SP:P80879] [LE:137548] [RE:137985] [DI:complement] >gp:[GI:g2293159] [LN:AF008220] [AC:AF008220] [GN:ytkB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to HI1349 from H. influenzae] [LE:42442] [RE:42879] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23625008_c1_347 51 3823 963 320 749 3.2e-74 Description gp:[GI:d1039089:g4512388] [LN:AB011838] [AC:AB011838] [PN:mannnose-6 phospate isomelase] [GN:ydhS] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA, clone_lib:lambda no.] [DB:genpept-bct1] [EC:5.3.1.8] [DE:Bacillus halodurans C-125 genomic DNA, 6A fragment, clone ALBAC004.] [NT:similar to B. subtilis ydhS gene (53–69% identity)] [LE:7672] [RE:8619] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23625387_c1_402 52 3824 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23634678_c2_424 53 3825 1194 397 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23634702_c2_453 54 3826 792 263 498 1.3e-47 Description sp:[LN:THIM_BACSU] [AC:P39593] [GN:THIM:THIK:IPA-25D] [OR:BACILLUS SUBTILIS] [EC:2.7.1.50] [DE:HYDROXYETHYLTHIAZOLE KINASE) (THZ KINASE) (TH KINASE)] [SP:P39593] [DB:swissprot] >pir:[LN:539680] [AC:S39680:G69722] [PN:hydroxyethylthiazole kinase, thiK:protein ipa-25d] [GN:thiK] [CL:hydroxyethylthiazole kinase:hydroxyethylthiazole kinase homology] [OR:Bacillus subtilis] [EC:2.7.1.50] [DB:pir2] >gp:[GI:g413949] [LN:BSGENR] [AC:X73124] [GN:ipa-25d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39593] [LE:25373] [RE:26191] [DI:direct] >gp:[GI:e1186329:g2636365] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:hydroxyethylthiazole kinase] [GN:thiK] [FN:phosphorylation of] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.50] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-25d, ywbJ] [SP:P39593] [LE:1317681] [RE:132586] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23651702_c1_343 55 3827 870 289 255 7.1e-22 Description pir:[LN:C70070] [AC:C70070] [PN:conserved hypothetical protein ywtE] [GN:ywtE] [CL:hypothetical protein ywpJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184491:g2636110] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to hypothetical proteins] [LE:97330] [RE:98190] [DI:direct] >gp:[GI:e308093:g1894770] [LN:BSZ92954] [AC:Z92954] [GN:ywtE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis yws[A,B,C,D,E,F,G] and gerBC genes.] [NT:product similar to Bacillus subtilis YxeH and YcsE] [LE:4292] [RE:5152] [DI:complement] >gp:[GI:e1184491:g2636110] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to hypothetical proteins] [LE:97330] [RE:98190] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_23711642_c1_397 56 3828 1026 341 1445 5.6e-148 Description gp:[GI:e284997:g1729794] [LN:SAUSIGB] [AC:Y09929] [GN:rsbU] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus rsbU, rsbV, rsbW & sigB genes.] [LE:784] [RE:1785] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2379658_f2_237 57 3829 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2383253_c2_405 58 3830 399 132 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24015687_c2_438 59 3831 465 154 119 1.8e-07 Description sp:[LN:ATPZ_BACP3] [AC:P09354] [OR:BACILLUS PS3] [SR:,THERMOPHILIC BACTERIUM PS-3] [DE:ATP SYNTHASE PROTEIN I] [SP:P09354] [DB:swissprot] >pir:[LN:S01397] [AC:S01397] [PN:H+-transporting ATP synthase, chain I] [CL:Bacillus H+-transporting ATP synthase chain I] [OR:thermophilic bacterium PS-3] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g458091] [LN:PS3TF0F1] [AC:X07804:X07374] [OR:thermophilic bacterium PS3] [DB:genpept-bct1] [DE:Thermophilic bacterium PS3 TF0F-1 operon for ATP synthase complex.] [NT:I protein (AA 1–127)] [SP:P09354] [LE:433] [RE:816] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24074137_c3_492 60 3832 1332 443 1360 5.7e-139 Description gp:[GI:g143434] [LN:BACRHOTDKX] [AC:M97678] [PN:Rho Factor] [GN:rho] [FN:transcriptional terminator] [OR:Bacillus subtilis] [SR:Bacillus subtilis (Transposon Tn917 insertional library) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis OrfR, 3′ end; OrfQ; transcriptional terminator (rho) gene; ribosomal protein L31; thymidine kinase (tdk) gene,complete cds.] [LE:1643] [RE:2926] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24228411_c1_375 61 3833 399 132 358 8.6e-33 Description gp:[GI:g2735512] [LN:SCU96108] [AC:U96108] [PN:single-strand binding protein homolog] [GN:ssb] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus (3R)-hydroxymyristoyl acyl carrier proteindehydrase homolog (fabZ) gene, partial cds, YwpF homolog, single-strand binding protein homolog (ssb), SceD precursor (sceD), SceA precursor (sceA) and SceE precursor (sceE) genes, complete cds, and TenA homolog (tenA) gene, partial cds.] [NT:SSB] [LE:857] [RE:1294] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24235952_c1_398 62 3834 327 108 501 6.0e-48 Description gp:[GI:e284998:g1729795] [LN:SAUSIGB] [AC:Y09929] [GN:rsbV] (OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus rsbU, rsbV, rsbW & sigB genes.] [LE:1905] [RE:2231] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24245327_c1_364 63 3835 714 237 843 3.5e-84 Description gp:[GI:e258331:g1765902] [LN:BCUPPGLYA] [AC:X99545] [PN:uracil phosphoribosyltransferase] [GN:upp] [OR:Bacillus caldolyticus] [DB:genpept-bct1] [DE:B. caldolyticus upp gene.] [SP:P7088l] [LE:431] [RE:1060] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24254202_c1_368 64 3836 1512 503 2050 4.3e-212 Description sp:[LN:ATPA_BACME] [AC:P17674] [GN:ATPA] [OR:BACILLUS MEGATERIUM] [EC:3.6.1.34] [DE:ATP SYNTHASE ALPHA CHAIN,] [SP:P17674] [DB:swissprot] >pir:[LN:F31482] [AC:F31482] [PN:H+-transporting ATP synthase, alpha chain] [CL:H+-transporting ATP synthase alpha chain:H+-transporting ATP synthase alpha chain homology] [OR:Bacillus megaterium] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g142559] [LN:BACATPA] [AC:M20255:J04455:M18352:M23924] [PN:ATP synthase alpha subunit] [OR:Bacillus megaterium] [SR:B. megaterium (QM B1551) DNA, clones pWSB100, pCAH1.3, and pWPC208] [DB:genpept-bct1] [DE:B. megaterium ATP synthase i, a, c, b, delta, alpha, gamma, beta and epsilon subunit genes, complete cds, and ORF.] [LE:2853] [RE:4361] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24256562_c1_381 65 3837 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24350953_f1_2 66 3838 132 43 72 0.017 Description pir:[LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030229:g3256603] [LN:AP 000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24353427_c3_503 67 3839 543 180 229 4.0e-19 Description sp:[LN:ATPD_BACSU] [AC:P37811] [GN:ATPH] [OR:BACILLUS SUBTILIS] [EC:3.G.1.34] [DE:ATP SYNTHASE DELTA CHAIN,] [SP:P37811] [DB:swissprot] >pir:[LN:I40365] [AC:I40365:D69592:S39253] [PN:H+-transporting ATP synthase, delta chain (atpH)] [GN:atpH] [CL:H+-transporting ATP synthase delta chain] [OR:Bacillus subtilis] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g433988] [LN:BSATPASE] [AC:Z28592] [PN:ATP synthase subunit delta] [GN:atpH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis(168) atpase genes for ATP synthase subunits i, a, c ,b, delta, alpha, gamma, beta, epsilon.] [SP:P37811] [LE:2484] [RE:3029] [DI:direct] >gp:[GI:e1184590:g2636209] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP synthase (subunit delta)] [GN:atpH] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.6.1.34] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37811] [LE:187368] [RE:187913] [DI:complement] >gp:[GI:e1184590:g2636209] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP synthase (subunit delta)] [GN:atpH] [OR:Bacillus subtilis] [DB:genpept] [EC:3.6.1.34] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37811] [LE:187368] [RE:187913] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24392193_c1_346 68 3840 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24406260_c2__433 69 3841 1296 431 1258 3.7e-128 Description sp:[LN:MURA_BACSU] [AC:P19670:Q03225] [GN:MURA:MURZ] [OR:BACILLUS SUBTILIS] [EC:2.5.1.7] [DE:ENOLPYRUVYL TRANSFERASE) (EPT)] [SP:P19670:Q03225] [DB:swissprot] >pir:[LN:G32354] [AC:S55428:G32354:H69662] [PN:UDP-N-acetylglucosamine 1-carboxyvinyltransferase, murZ] [GN:murZ] [CL:UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurZ] [OR:Bacillus subtilis] [EC:2.5.1.7] [DB:pir2] >gp:[GI:g853767] [LN:BSDNA320D] [AC:Z49782] [PN:UDP-N-acetylglucosamine] [GN:murZ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [SP:P19670] [LE:14403] [RE:15692] [DI:direct] >gp:[GI:e1184616:g2636235] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-N-acetylglucosamine] [GN:murZ] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.5.1.7] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:murZ, lssF, rev-4] [LE:208051] [RE:209340] [DI:complement] >gp:[GI:e118G211:g2636247] [LN:BSUB0020] [AC:Z99123:AL00912G] [PN:UDP-N-acetylglucosamine] [GN:murZ] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.5.1.7] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:murZ, lssF, rev-4] [LE:6741] [RE:8030] [DI:complement] >gp:[GI:e1184616:g2636235] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-N-acetylglucosamine] [GN:murZ] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [EC:2.5.1.7] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:murZ, lssF, rev-4] [SP:P19670] [LE:208051] [RE:209340] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24407631_f3_252 70 3842 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24415933_c2_418 71 3843 435 144 83 0.026 Description sp:[LN:YUXK_BACSU] [AC:P40761:O05233] [GN:YUXK] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 15.7 KD PROTEIN IN PBPD-COMA INTERGENIC REGION (ORF2)] [SP:P40761:O05233] [DB:swissprot] >pir:[LN:B55220] [AC:B55220:D70025] [PN:hypothetical protein yuxK:pbpD 3′-region hypothetical protein] [GN:yuxK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g520537] [LN:BSU11882] [AC:U11882] [PN:unknown] [GN:pbpD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis orf1, partial cds, penicillin-binding protein 4(pbpD) gene, complete cds, and orf2, complete cds.] [NT:orf2] [LE:2760] [RE:3173] [DI:direct] >gp:[GI:e1184228:g2635646] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yuxK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:alternate gene name:yugD] [SP:P40761] [LE:37885] [RE:38298] [DI:direct] >gp:[GI:e311522:g1934785] [LN:BSZ93933] [AC:Z93933] [PN:unknown] [GN:yugD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment from yugA to yugD.] [SP:P40761] [LE:7318] [RE:7731] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24508563_c2_436 72 3844 1092 363 1226 9.0e-125 Description sp:[LN:RF1_BACSU] [AC:P45872] [GN:PRFA] [OR:BACILLUS SUBTILIS] [DE:PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1)] [SP:P45872] [DB:swissprot] >pir:[LN:S55437] [AC:S55437:G69681] [PN:translation releasing factor RF-1:peptide chain release factor 1] [GN:prfA:RF-1] [CL:translation releasing factor] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g853776] [LN:BSDNA320D] [AC:Z49782] [PN:peptide chain release factor 1] [GN:prfA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [NT:gtg start codon] [SP:P45872] [LE:23623] [RE:24693] [DI:direct] >gp:[GI:e1184607:g2636226] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:peptide chain release factor 1] [GN:prfA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P45872] [LE:199050] [RE:200120] [DI:complement] >gp:[GI:e1184607:g2636226] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:peptide chain release factor 1] [GN:prfA] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P45872] [LE:199050] [RE:200120] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24625216_f3_264 73 3845 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24641687_c2_437 74 3846 426 141 237 5.7e-20 Description sp:[LN:YWLE_BACSU] [AC:P39155] [GN:YWLE:IPC-31D] [OR:BACILLUS SUBTILIS] [EC:3.1.3.48] [DE:(EC 3.1.3.48)] [SP:P39155] [DB:swissprot] >pir:[LN:S49360] [AC:I40479:B70062:S49360] [PN:protein-tyrosine-phosphatase, homolog ywlE, low molecular weight:ipc-31d protein] [GN:ywlE:ipc-31d [CL:protein-tyrosine-phosphatase, low molecular weight] [OR:Bacillus subtilis] [EC:3.1.3.48] [DB:pir1] >gp:[GI:g556883] [LN:BSSPORUPP] [AC:Z38002] [PN:Unknown] [GN:ipc-31d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis spoII-R, glyC and upp genes.] [SP:P39155] [LE:3679] [RE:4131] [DI:direct] >gp:[GI:e1184599:g2636218] [LN:BSUB0019) [AC:Z99122:AL009126] [GN:ywlE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:ipc-31d; similar to] [SP:P39155] [LE:193770] [RE:194222] [DI:complement] >gp:[GI:e1184599:g2636218] [LN:BSUB00l9] [AC:Z99122:AL009126] [GN:ywlE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:ipc-31d; similar to] [SP:P39155] [LE:193770] [RE:194222] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24642963_c2_458 75 3847 216 71 81 0.0019 Description sp:[LN:COPP_HELFE] [AC:O32620] [GN:COPP] [OR:HELICOBACTER FELIS] [DE:COP ASSOCIATED PROTEIN (COPPER ION BINDING PROTEIN)] [SP:O32620] [DB:swissprot] >gp:[GI:e353967:g2660543] [LN:HFAJ1932] [AC:AJ001932] [GN:copP] [FN:divalent cation binding protein] [OR:Helicobacter felis] [DB:genpept-bct1] [DE:Helicobacter felis ftsH, copA, copP genes and two ORF's.] [SP:O32620] [LE:5306] [RE:5506] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24647558_c1_352 76 3848 357 118 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_24665932_c3_496 77 3849 840 279 477 2.1e-45 Description sp:[LN:HEMK_BACSU] [AC:P45873] [GN:YWKE] [OR:BACILLUS SUBTILIS] [DE:HEMK PROTEIN HOMOLOG] [SP:P45873] [DB:swissprot] >pir:[LN:S55438] [AC:S55438:D70061] [PN:protoporphyrinogen oxidase homolog ywkE] [GN:ywkE [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g853777] [LN:BSDNA320D] [AC:Z49782] [GN:ywkE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [NT:product similar to E. coli PRFA2 protein] [SP:P45873] [LE:24695] [RE:25561] [DI:direct] >gp:[GI:e1184606:g2636225] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywkE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to protoporphyrinogen oxidase] [SP:P45873] [LE:198182] [RE:199048] [DI:complement] >gp:[GI:e1184606:g2636225] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywkE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to protoporphyrinogen oxidase] [SP:P45873] [LE:198182] [RE:199048] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2541301_c3_505 78 3850 351 116 180 6.3e-14 Description pir:[LN:G70070] [AC:G70070] [PN:hypothetical protein ywzB] [GN:ywzB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184584:g2636203] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywzB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [LE:182127] [RE:182357] [DI:complement] >gp:[GI:e1184584:g2636203] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywzB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [LE:182127] [RE:182357] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_25422081_c3_475 79 3851 204 67 84 0.014 Description sp:[LN:ETF1_FOWP1] [AC:P21966] [GN:FPD6] [OR:FOWLPOX VIRUS] [SR:FP-1,] [DE:EARLY TRANSCRIPTION FACTOR 70 KD SUBUNIT] [SP:P21966] [DB:swissprot] >pir:[LN:F35216] [AC:F35216] [PN:FPD6 protein] [CL:vaccinia virus early transcription factor 70K chain] [OR:fowlpox virus] [DB:pir2] >gp:[GI:g61229] [LN:POFPHIND] [AC:X17202] [GN:ORF FPD6] [FN:Vaccinia D6 homolog] [OR:Fowlpox virus] [DB:genpept-vr1] [DE:Fowlpox virus DNA sequence (Hind III fragment).] [SP:P21966] [LE:6614] [RE:8431] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_26173800_c1_387 80 3852 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_26182767_c2_426 81 3853 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_26212756_f2_137 82 3854 1488 495 1477 2.3e-151 Description sp:[LN:YWNE_BACSU] [AC:P71040] [GN:YWNE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 55.8 KD PROTEIN IN SPOIIQ-MTA INTERGENIC REGION] [SP:P71040] [DB:swissprot] >pir:[LN:G70063] [AC:G70063] [PN:cardiolipin synthase homolog ywnE] [GN:ywnE] [CL:Bacillus probable cardiolipin synthetase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184565:g2636184] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywnE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to cardiolipin synthase] [SP:P71040] [LE:164628] [RE:166076] [DI:direct] >gp:[GI:e269549:g1592701] [LN:BSUEROP] [AC:Y08559] [PN:Unknown] [GN:ywnE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis urease operon and downstream DNA.] [NT:Product similar to Escherichia coli cardiolipin] [SP:P71040] [LE:5155] [RE:6603] [DI:complement] >gp:[GI:e1184565:g2636184] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywnE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to cardiolipin synthase] [SP:P71040] [LE:164628] [RE:166076] [D1:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_26360260_c3_520 83 3855 375 124 416 6.1e-39 Description gp:[GI:e1340260:g3850850] [LN:SAU1G431] [AC:Y16431] [PN:dpj protein] [GN:dpj] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus dpj, alr genes, partial kdpC gene and 4ORF's.] [LE:2975] [RE:3334] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_26751542_f1_73 84 3856 492 163 577 5.3e-56 Description pir:[LN:A64533] [AC:A64533] [PN:conserved hypothetical protein HP0105] [CL:conserved hypothetical protein H10491] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313l88] [LN:AE000532] [AC:AE000532:AE000511] [PN:conserved hypothetical protein] [GN:HP0105] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 10 of 134 of the complete genome.] [NT:similar to GB:L42023 SP:P44007 PID:1003866] [LE:5494] [RE:5961] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_26757677_c2_408 85 3857 1377 458 2163 4.6e-224 Description gp:[GI:e1352473:g3892895] [LN:SAARGFEMD] [AC:Y15477] [PN:phosphoglucosamine-mutase] [GN:glmM] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus argI, glmM genes and ORF1 and ORF2.] [LE:2968] [RE:4323] [DI:direct] >gp:[GI:e283110:g1684749] [LN:SAFEMD] [AC:Y09570] [GN:femD] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus femD gene.] [LE:511] [RE:1866] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2775462_c1_394 86 3858 522 173 331 6.2e-30 Description gp:[GI:e1340259:g3850849] [LN:SAU16431] [AC:Y16431] [PN:hypothetical protein] [GN:ORF4] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus dpj, alr genes, partial kdpC gene and 4ORF's.] [LE:2477] [RE:2971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_2925275_f1_20 87 3859 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_29307312_c3_470 88 3860 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_29695252_c3_497 89 3861 1098 365 665 2.5e-65 Description sp:[LN:YWLC_BACSU] [AC:P39153] [GN:YWLC:IPC-29D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 37.0 KD PROTEIN IN SPOIIR-GLYC INTERGENIC REGION] [SP:P39153] [DB:swissprot] >pir:[LN:140476] [AC:140476:H70061:S49358 [PN:conserved hypothetical protein ywlC:SUA5 homolog ipc-29d] [GN:ywlC:ipc-29d] [CL:Bacillus subtilis conserved hypothetical protein ywlC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g556881] [LN:BSSPORUPP] [AC:Z38002] [PN:Similar to Saccharomyces cerevisiae SUA5] [GN:ipc-29d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis spoII-R, glyC and upp genes.] [SP:P39153] [LE:1927] [RE:2967] [DI:direct] >gp:[GI:e1184601:g2636220] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywlC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:ipc-29d; similar to] [SP:P39153] [LE:194934] [RE:195974] [DI:complement] >gp:[GI:e1184601:g2636220] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywlC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:ipc-29d; similar to] [SP:P39153] [LE:194934] [RE:195974] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_29879407_c2_410 90 3862 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_30682816_c1_367 91 3863 537 178 376 1.1e-34 Description sp:[LN:ATPF_BACME] [AC:P20601] [GN:ATPF] [OR:BACILLUS MEGATERIUM] [EC:3.6.1.34] [DE:ATP SYNTHASE B CHAIN,] [SP:P20601] [DB:swissprot] >pir:[LN:D31482] [AC:D31482] [PN:H+-transporting ATP synthase, chain b] [CL:H+-transporting ATP synthase chain I] [OR:Bacillus megaterium] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g142557] [LN:BACATPA] [AC:M20255:J04455:M18352:M23924] [PN:ATP synthase b subunit] [OR:Bacillus megaterium] [SR:B. megaterium (QM B1551) DNA, clones pWSB100, pCAH1.3, and pWPC208] [DB:genpept-bct1] [DE:B. megaterium ATP synthase i, a, c, b, delta, alpha, gamma, beta and epsilon subunit genes, complete cds, and ORF.] [LE:1777] [RE:2295] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_31637_c2_406 92 3864 891 296 1229 4.3e-125 Description gp:[GI:e1352471:g3892893] [LN:SAARGFEMD] [AC:Y15477] [PN:hypothetical protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus argI, glmM genes and ORF1 and ORF2.] [NT:orf1] [LE:1198] [RE:2007] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_33412800_c2_429 93 3865 882 293 135 1.2e-08 Description pir:[LN:B69595] [AC:B69595] [PN:spermine/spermidine acetyltransferase bltD] [GN:bltD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013033:g1303698] [LN:BACJHG42] [AC:D84432:D82370] [PN:BltD] [OR:Bacillus subtilis] [SR:Bacillus subtilis] (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:811] [RE:1269] [DI:complement] >gp:[GI:e1183889:g2635105] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:spermine/spermidine acetyltransferase] [GN:bltD] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.1.-] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:alternate gene name:bmr2D, bmtD] [SP:P39909] [LE:118163] [RE:118621] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_3361326_c2_403 94 3866 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_33673776_c2_435 95 3867 297 98 312 6.4e-28 Description gp:[GI:g4193373] [LN:AF072894] [AC:AF072894] [PN:ribosomal protein L31] [GN:rpmE] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes 4b1 putative transcription terminator Rho(rho) gene, partial cds; and wall teichoic acid glycosylationprotein GtcA (gtcA) and ribosomal protein L31 (rpmE) genes, complete cds.] [LE:848] [RE:1093] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_33751260_c1_372 96 3868 471 156 448 2.5e-42 Description pir:[LN:D70065] [AC:D70065] [PN:(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, ywpB] [GN:ywpB] [CL:(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase] [OR:Bacillus subtilis] [EC:4.2.1.-] [DB:pir2] >gp:[GI:e1184543:g2636162] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywpB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to hydroxymyristoyl-(acyl carrier protein)] [LE:145724] [RE:146122] [DI:complement] >gp:[GI:e289141:g1763703] [LN:BSZ83337] [AC:Z83337] [GN:ywpB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis mbl, flh[O,P], rapD, ywp(B, C, D, E, F, G, H, I, J] and ywqAgenes.] [NT:similar to hydroxymyristoyl-(acyl carrier protein)] [LE:3199] [RE:3597] [DI:direct] >gp:[GI:e1184543:g2636162] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywpB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:similar to hydroxymyristoyl-(acyl carrier protein)] [LE:145724] [RE:146122] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_33870312_c3_522 97 3869 792 263 1213 2.1e-123 Description gp:[GI:e279935:g1934991] [LN:SASIGFACB] [AC:Y07645] [PN:sigma factor B] [GN:sigB] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus sigB gene.] [LE:2674] [RE:3444] [DI:direct] >gp:[GI:e285000:g1729797] [LN:SAUSIGB] [AC:Y09929] [PN:sigma-B] [GN:sigB] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus rsbU, rsbV, rsbW & sigB genes.] [LE:2687] [RE:3457] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34062928_c3_521 98 3870 1083 360 1321 7.7e-135 Description gp:[GI:e1340261:g3850851] [LN:SAU16431] [AC:Y16431] [PN:alr protein] [GN:alr] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus dpj, alr genes, partial kdpC gene and 4ORF's.] [LE:3400] [RE:4548] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34181277_c2_461 99 3871 501 166 299 1.5e-26 Description gp:[GI:e1340257:g3850847] [LN:SAU16431] [AC:Y16431] [PN:hypothetical protein] [GN:ORF2] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus dpj, air genes, partial kdpC gene and 4ORF's.] [LE:438] [RE:917] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34187702_c2_407 100 3872 936 311 1173 3.7e-119 Description gp:[GI:e1352472:g3892894] [LN:SAARGFEMD] [AC:Y15477] [PN:hypothetical protein] [GN:orf2] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus argI, glmM genes and ORF1 and ORF2.] [LE:2009] [RE:2941] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34197275_f2_176 101 3873 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34250327_c1_396 102 3874 363 120 540 4.5e-52 Description gp:[GI:e279931:g1934987] [LN:SASIGFACB] [AC:Y07645] [GN:ORF1] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus sigB gene.] [LE:72] [RE:434] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34589010_c1_348 103 3875 246 81 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34611067_f3_302 104 3876 540 179 145 3.2e-10 Description sp:[LN:YWJG_BACSU] [AC:P06629] [GN:YWJG] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 19.1 KD PROTEIN IN SPO0F-PYRG INTERGENIC REGION (ORFS)] [SP:P066291] [DB:swissprot] >pir:[LN:I40471] [AC:I40471:S55424:E70060] [PN:hypothetical protein ywjG:spoOF protein] [GN:ywjG:spoOF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g853763] [LN:BSDNA320D] [AC:Z49782] [GN:ywjG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [SP:P06629] [LE:11169] [RE:11690] [DI:complement] >gp:[GI:g401771] [LN:BSSPOO] [AC:V00105:J01549] [GN:spoOF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis gene required at an early stage of sporulation. (gene code spoOF).] [SP:P06629] [LE:541] [RE:1062] [DI:direct] >gp:[GI:e1184620:g2636239] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywjG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.) [SP:P06629] [LE:212053] [RE:212574] [DI:direct] >gp:[GI:e1186215:g2636251] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywjG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [SP:P066291 [LE:10743] [RE:11264] [DI:direct] >gp:[GI:e1184620:g2636239] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywjG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P06629] [LE:212053] [RE:212574] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34615700_f2_193 105 3877 819 272 155 2.8e-08 Description gp:[GI:g1293846] [LN:CELC42D8] [AC:U56966] [GN:C42D8.3] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain = Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid C42D8.] [NT:coded for by C. elegans cDNA yk30b3.5; coded for by] [LE:8907:9377:9844:10820] [RE:9056:9564:10206:10976] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_34646926_f2_206 106 3878 732 243 585 7.6e-57 Description sp:[LN:DEOD_ACTPL] [AC:P94164] [GN:DEOD] [OR:ACTINOBACILLUS PLEUROPNEUMONIAE] [SR:,HAEMOPHILUS PLEUROPNEUMONIAE] [EC:2.4.2.1] [DE:(PNP)] [SP:P94164] [DB:swissprot] >gp:[GI:g1732037] [LN:APU55016] [AC:U55016] [PN:purine nucleoside phosphorylase] [GN:deoD] [FN:cleavage of guanosine or inosine to respective] [OR:Actinobacillus pleuropneumoniae] [DB:genpept-bct1] [EC:2.4.2.1] [DE:Actinobacillus pleuropneumoniae heat-shock 10 protein GroES (mopB), heat-shock 60 protein GroEL (mopA), purine nucleoside phosphorylase(deoD) genes, complete cds, alcohol dehydrogenase (adhE) gene, partial cds.] [LE:176] [RE:898] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_35354656_f1_108 107 3879 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_35647783_f1_103 108 3880 690 229 181 4.9e-14 Description pir:[LN:F71082] [AC:F71082] [PN:hypothetical protein PH0924] [GN:PH0924] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030963:g3257337] [LN:AP000004] [AC:AP000004:AB009494:AB009495:AB009496:AB009497:AB009498:AB009499] [PN:128aa long hypothetical protein] [GN:PH0924] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 777001–994000 nt. position(4/7).] [LE:55768] [RE:56154] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_36128785_c1_369 109 3881 888 295 796 3.3e-79 Description sp:[LN:ATPG_BACME] [AC:P20602] [GN:ATPG] [OR:BACILLUS MEGATERIUM] [EC:3.6.1.34] [DE:ATP SYNTHASE GAMMA CHAIN,] [SP:P20602] [DB:swissprot] >pir:[LN:G31482] [AC:G31482] [PN:H+-transporting ATP synthase, gamma chain] [CL:H+-transporting ATP synthase gamma chain] [OR:Bacillus megaterium] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g142560] [LN:BACATPA] [AC:M20255:J04455:Ml8352:M23924] [PN:ATP synthase gamma subunit] [OR:Bacillus megaterium] [SR:B. megaterium (QM B1551) DNA, clones pWSB100, pCAH1.3, and pWPC208] [DB:genpept-bct1] [DE:B. megaterium ATP synthase i, a, c, b, delta, alpha, gamma, beta and epsilon subunit genes, complete cds, and ORF.] [LE:4467] [RE:5324] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_36225052_c3_502 110 3882 234 77 270 1.8e-23 Description pir:[LN:I39786] [AC:I39786] [PN:H+-transporting ATP synthase, C chain] [GN:atpE] [CL:H+-transporting ATP synthase lipid-binding protein] [OR:Bacillus firmus] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g142570] [LN:BACATPSYNB] [AC:M84713] [PN:ATP synthase c subunit] [GN:atpE] [FN:proton translocation] [OR:Bacillus firmus] [SR:Bacillus firmus DNA] [DB:genpept-bct1] [DE:Bacillus firmus ATP synthase a and c subunit genes, 3′ end and complete cds.] [NT:putative] [LE:299] [RE:511] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_36363432_f1_85 111 3883 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4039012_c3_514 112 3884 168 55 59 0.036 Description gp:[GI:g5410434] [LN:AF134170] [AC:AF134170] [PN:gag] [OR:Dictyostelium discoideum] [DB:genpept] [DE:Dictyostelium discoideum retrotransposon TRE3-B, complete sequence.] [LE:139] [RE:1347] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4063202_c3_499 113 3885 1239 412 1563 1.8e-160 Description sp:[LN:GLYA_BACSU] [AC:P39148] [GN:GLYA:GLYC:IPC-34D] [OR:BACILLUS SUBTILIS] [EC:2.1.2.1] [DE:(SHMT)] [SP:P39148] [DB:swissprot] >pir:[LN:I40483] [AC:I40483:H69635:S49363] [PN:glycine hydroxymethyltransferase, glyA:serine hydroxymethyltransferase] [GN:glyA:glyC] [CL:glycine hydroxymethyltransferase] [OR:Bacillus subtilis] [EC:2.1.2.1] [DB:pir2] >gp:[GI:g556886] [LN:BSSPORUPP] [AC:Z38002] [PN:serine hydroxymethyltransferase] [GN:glyC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis spoII-R, glyc and upp genes.] [SP:P39148] [LE:5499] [RE:6746] [DI:direct] >gp:[GI:e1184596:g2636215] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:serine hydroxymethyltransferase] [GN:glyA] [FN:glycine/serine/threonine metabolism] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.2.1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:glyc, ipc-34d] [SP:P39148] [LE:191155] [RE:192402] [DI:complement] >gp:[GI:e1184596:g2636215] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:serine hydroxymethyltransferase] [GN:glyA] [FN:glycine/serine/threonine metabolism] [OR:Bacillus subtilis] [DB:genpept] [EC:2.1.2.1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:glyc, ipc-34d] [SP:P39148] [LE:191155] [RE:192402] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_40712_f2_210 114 3886 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4072135_c3_490 115 3887 1467 488 870 4.8e-87 Description pir:[LN:E70961] [AC:E70961] [PN:hypothetical protein Rv0223c] [GN:Rv0223c] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e304956:g1871596] [LN:MTCY8D5] [AC:Z92669:AL123456] [PN:hypothetical protein Rv0223c] [GN:Rv0223c] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 12/162.] [NT:Rv0223c, (MTCY08D5.18), aldehyde dehydrogenase,] [LE:18979] [RE:20442] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4079511_f1_3 116 3888 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_409556_f1_111 117 3889 135 44 112 2.5e-06 Description pir:[LN:D71245] [AC:D71245] [PN:hypothetical protein PH0221] [GN:PH0221] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030234:g3256608] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:235aa long hypothetical protein] [GN:PH0221] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:194212] [RE:194919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4178218_c1_353 118 3890 675 224 81 0.0066 Description gp:[GI:g1131502] [LN:PBU42580] [AC:U42580:U17055:U32570] [GN:A158L] [OR:Paramecium bursaria Chlorella virus 1] [DB:genpept-vrl] [DE:Paramecium bursaria Chlorella virus 1, complete genome.] [LE:80789] [RE:81103] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4346926_c2_450 119 3891 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4728558_c2_409 120 3892 1860 619 2088 4.1e-216 Description pir:[LN:B69633] [AC:B69633] [PN:L-glutamine-D-fructose-6-phosphate amidotransferase glmS] [GN:glmS] [CL:glutamine- -fructose-6-phosphate aminotransferase (isomerizing)] [OR:Bacillus subtilis] [DB:pir2] >gp:LGI:d1034037:g3599596] [LN:AB006424] [AC:AR006424] [PN:L-GLUTAMINE-D-FRUCTOSE-6-PHOSPHATE AMIDO] [GN:gcaA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23 degree.] [LE:3246] [RE:5048] [DI:direct] >gp:[GI:g726480] [LN:BSU21932] [AC:U21932:D21198] [PN:L-glutamine-D-fructose-6-phosphate] [GN:gcaA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis L-glutamine-D-fructose-6-phosphateamidotransferase (gcaA) gene, complete cds.] [LE:312] [RE:2114] [DI:direct] >gp:[GI:e1182111:g2632445] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:L-glutamine-D-fructose-6-phosphate] [GN:glmS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.6.1.16] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name:gcaA, ybxD] [SP:P39754] [LE:200263] [RE:202065] [DI:direct] >gp:[GI:e1182129:g2632463] [LN:BSUB0002] [AC:Z99105:AL009126] [PN:L-glutamine-D-fructose-6-phosphate] [GN:glmS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.6.1.16] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to 415810.] [NT:alternate gene name:gcaA, ybxD] [SP:P39754] [LE:5613] [RE:7415] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_476567_c1_355 121 3893 567 188 292 8.5e-26 Description sp:[LN:RPOE_BACSU] [AC:P12464] [GN:RPOE] [OR:BACILLUS SUBTILIS] [EC:2.7.7.6] [DE:DNA-DIRECTED RNA POLYMERASE DELTA SUBUNIT,] [SP:P12464] [DB:swissprot] >pir:[LN:JT0302] [AC:JT0302:H32354:S55422:H69698] [PN:DNA-directed RNA polymerase, delta chain rpoE] [GN:rpoE] [CL:DNA-directed RNA polymerase delta chain] [OR:Bacillus subtilis] [EC:2.7.7.6] [DB:pir1] >gp:[GI:g143456] [LN:BACRPOE] [AC:M21677] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) DNA, clone mML11] [DB:genpept-bct1] [DE:B. subtilis RNA polymerase delta subunit (rpoE) gene, complete cds.] [NT:rpoE protein (ttg start codon)] [LE:101] [RE:622] [DI:direct] >gp:[GI:g853761] [LN:BSDNA320D] [AC:Z49782] [PN:RNA polymerase delta subunit] [GN:rpoE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [NT:ttg start codon] [SP:P12464] [LE:8717] [RE:9238] [DI:direct] >gp:[GI:e1186217:g2636253] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:RNA polymerase (delta subunit)] [GN:rpoE] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.6] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [SP:P12464] [LE:13195] [RE:13716] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4869213_c3_519 122 3894 1521 506 811 3.4e-128 Description gp:[GI:e1340258:g3850848] [LN:SAU16431] [AC:Y16431] [PN:hypothetical protein] [GN:ORF3] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus dpj, air genes, partial kdpC gene and 4ORF's.] [LE:910] [RE:2493] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4881262_f3_293 123 3895 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4881302_f2_191 124 3896 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4901712_c1_370 125 3897 1428 475 1999 1.1e-206 Description sp:[LN:ATPB_BACSU] [AC:P37809] [GN:ATPD] [OR:BACILLUS SUBTILIS] [EC:3.6.1.34] [DE:(VEG31)] [SP:P37809] [DB:swissprot] >pir:[LN:140368] [AC:I40368:H69591:S39256] [PN:H+-transporting ATP synthase, beta chain (atpD)] [GN:atpD] [CL:H+-transporting ATP synthase alpha chain: H+-transporting ATP synthase alpha chain homology] [OR:Bacillus subtilis] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g433991] [LN:BSATPASE] [AC:Z28592] [PN:ATP synthase subunit beta] [GN:atpD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis (168) atpase genes for ATP synthase subunits i, a, c ,b, delta, alpha, gamma, beta, epsilon.] [SP:P37809] [LE:5520] [RE:6941] [DI:direct] >gp:[GI:e1184587:g2636206] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP synthase (subunit beta)] [GN:atpD] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.6.1.34] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37809] [LE:183456] [RE:184877] [DI:complement] gp:[GI:e1184587:g2636206] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP synthase (subunit beta)] [GN:atpD] [OR:Bacillus subtilis] [DB:genpept] [EC:3.6.1.34] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37809] [LE:183456] [RE:184877] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_4962802_c2_421 126 3898 1305 434 1591 1.9e-163 Description gp:[GI:g4336793] [LN:AF105341] [AC:AF105341] [PN:pyrimidine nucleoside phosphorylase] [GN:pdp1] [OR:Listeria monocytogenes] [DB:genpept-bct2] LDE:Listeria monocytogenes threonine dehydratase (thd1) gene, partial cds; alpha acetolactate decarboxylase gene, complete cds; and pyrimidine nucleoside phosphorylase (pdp1) gene, partial cds.] [LE:1749] [RE:>3010] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_S078177_c1_365 127 3899 1062 353 1169 9.9e-119 Description gp:[GI:g1773355] [LN:5AU81973] [AC:U81973] [PN:Cap5P] [GN:cap5P] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus capsule gene cluster Cap5A through Cap5Pgenes, complete cds.] [NT:putative N-acetylglucosamine 2-epimerase] [LE:157691] [RE:16944] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_5111502_c2_454 128 3900 924 307 417 4.8e-39 Description sp:[LN:YQJG_BACSU] [AC:P54544] [GN:YQJG] [OR:BACILLUS SUBTILIS] [DE:PRECURSOR] [SP:P54544] [DB:swissprot] >pir:[LN:G69963] [AC:G69963] [PN:lipoprotein SpoIIIJ-like homolog yqjG] [GN:yqjG] [CL:stage III sporulation protein:stage III sporulation protein homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013293:g1303958] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:234919] [RE:235746] [DI:complement] >gp:[GI:e1185657:g2634823] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to lipoprotein SpoIIIJ-like] [SP:P54544] [LE:87873] [RE:88700] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_5131927_f1_93 129 3901 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_5318785_c1_395 130 3902 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_5319213_c2_442 131 3903 417 138 312 6.4e-28 Description sp:[LN:ATPE_BACSU] [AC:P37812] [GN:ATPC] [OR:BACILLUS SUBTILIS] [EC:3.6.1.34] [DE:ATP SYNTHASE EPSILON CHAIN,] [SP:P37812] [DB:swissprot] >pir:[LN:I40369] [AC:I40369:G69591:S39257] [PN:H+-transporting ATP synthase, epsilon chain (atpC)] [GN:atpC] [CL:H+-transporting ATP synthase epsilon chain] [OR:Bacillus subtilis] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g433992] [LN:BSATPASE] [AC:Z28592] [PN:ATP synthase subunit epsilon] [GN:atpC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis (168) atpase genes for ATP synthase subunits i, a, c, b, delta, alpha, gamma, beta, epsilon.] [SP:P37812] [LE:6965] [RE:7363] [DI:direct] >gp:[GI:e1184586:g2636205] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP synthase (subunit epsilon)] [GN:atpC] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.6.1.34] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37812] [LE:183034] [RE:183432] [DI:complement] >gp:[GI:e1184586:g2636205] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP synthase (subunit epsilon)] [GN:atpC] [OR:Bacillus subtilis] [DB:genpept] [EC:3.6.1.34] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37812] [LE:183034] [RE:183432] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_582760_c2_463 132 3904 207 68 150 9.5e-11 Description gp:[GI:e1340262:g3850852] [LN:SAU16431] [AC:Y16431] [PN:hypothetical protein] [GN:ORF7] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus dpj, alr genes, partial kdpC gene and 4ORF's.] [LE:4633] [RE:>4735] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_5895301_c1_378 133 3905 948 315 603 9.4e-59 Description sp:[LN:THID_HAEIN] [AC:P44697] [GN:THID:H10416] [OR:HAEMOPHILUS INFLUENZAE] [EC:2.7.4.7] [DE:(HMP-P KINASE)] [SP:P44697] [DB:swissprotj >pir:[LN:I64151] [AC:I64151][PN:hypothetical protein HI0416] [CL:phosphomethylpyrimidine phosphate kinase] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573390] [LN:U32725] [AC:U32725:L42023] [PN:phosphomethylpyrimidine kinase (thiD)] [GN:HI0416] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 40 of 163 of the complete genome.] [NT:similar to GB:AE000511 PID:2313975 percent] [LE:1472] [RE:2281] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_6442192_f2_181 134 3906 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_6454635_c2_431 135 3907 912 303 1173 3.7e-119 Description sp:[LN:ALF1_BACSU] [AC:P132431] [GN:FBAA:FBA:FBA1:TSR] [OR:BACILLUS SUBTILIS] [EC:4.1.2.13] [DE:PROBABLE FRUCTOSE-BISPHOSPHATE ALDOLASE 1,] [SP:P13243] [DB:swissprot] >pir:[LN:D32354] [AC:S55426:D32354:E32354:D41835:B6962] [PN:fructose-bisphosphate aldolase, fbaA:30K phosphoprotein orfY-tsr:fructose-1,6-bisphosphate aldolase] [GN:fbaA] [CL:fructose-bisphosphate aldolase II] [OR:Bacillus subtilis] [EC:4.1.2.13] [DB:pir1] >gp:[GI:g460911] [LN:BACSPO0FA] [AC:M22039] [PN:fructose-bisphosphate aldolase] [GN:orfY-tsr] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strains JH642 and UOT0550) DNA] [DB:genpept-bct1] [EC:4.1.2.13] [DE:Bacillus subtillis spo0F, CTP synthetase (ctrA), and fructose-bisphosphate aldolase (orfY-tsr) genes, complete cds.] [LE:32701 [RE:4127] [DI:direct] >gp:[GI:g853765] [LN:BSDNA320D] [AC:Z49782] [PN:fructose biphosphate aldolase] [GN:tsr] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 320–321 degrees).] [SP:P13243] [LE:12411] [RE:13268] [DI:direct] >gp:[GI:e1184618:g2636237] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:fructose-1,6-bisphosphate aldolase] [GN:fbaA] [FN:glycolysis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.2.13] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:tsr, fba] [SP:P13243] [LE:210475] [RE:211332] [DI:complement] >gp:[GI:e1186213:g2636249] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:fructose-1,6-bisphosphate aldolase] [GN:fbaA] [FN:glycolysis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.2.13] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:tsr, fba] [SP:P13243] [LE:9165] [RE:10022] [DI:complement] >gp:[GI:e1184618:g2636237] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:fructose-1,6-bisphosphate aldolase] [GN:fbaA] [FN:glycolysis] [OR:Bacillus subtilis] [DB:genpept] [EC:4.1.2.13] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:tsr, fba] [SP:P13243] [LE:210475] [RE:211332] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_6645391_c1_342 136 3908 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_6681316_f2_197 137 3909 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_6721877_f2_194 138 3910 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_6906576_c1_371 139 3911 1296 431 1429 2.8e-146 Description pir:[LN:A69662] [AC:A69662 ] [PN:UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA] [GN:murA] [CL:UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurZ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e276830:g1648861] [LN:BSATPC] [AC:Z81356] [PN:UDP-N-acetylglucosamine] [GN:murA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis atpC gene.] [LE:1943] [RE:3253] [DI:direct] >gp:[GI:e1184582:g2636201] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-N-acetylglucosamine] [GN:murA] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.5.1.7] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [LE:179914] [RE:181224] [DI:complement] >gp:[GI:e1184582:g2636201] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-N-acetylglucosamine] [GN:murA] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [EC:2.5.1.7] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [LE:179914] [RE:181224] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_7240675_c2_460 140 3912 1374 457 976 2.8e-98 Description sp:[LN:MURF_BACSU] [AC:P96613] [GN:MURF] [OR:BACILLUS SUBTILIS] [EC:6.3.2.15] [DE:(D-ALANYL-D-ALANINE-ADDING ENZYME)] [SP:P96613] [DB:swissprot] >pir:[LN:F69662] [AC:F69662] [PN:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-al murF] [GN:murF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020047:g1881267] [LN:AB001488] [AC:AB001488] [GN:ydbQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,] [LE:42447] [RE:43820] [DI:direct] >gp:[GI:e1182423:g2632757] [LN:BSUB0003] [AC:Z99106:AL009126] [PN:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-] [GN:murF] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.2.151 [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:alternate gene name:ydbQ] [SP:P96613] [LE:106191] [RE:107564] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_7292200_c1_351 141 3913 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_9784625_c3_507 142 3914 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000979_9800787_f2_216 143 3925 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_10006507_f3_164 144 3916 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_10736002_c1_211 145 3917 1521 506 2313 5.9e-240 Description sp:[LN:SYK_STAAU] [AC:Q53638] [GN:LYSS] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.1.1.6] [DE:LYSYL-TRNA SYNTHETASE, (LYSINE- -TRNA LIGASE) (LYSRS)] [SP:Q53638] [DB:swissprot] >gp:[GI:g567884] [LN:STA5SRR] [AC:L36472] [PN:lysyl-tRNA synthetase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (clone library:ATCC 12600) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus lysyl-tRNA sythetase gene, complete cds, transfer RNA (tRNA) genes, 5S ribosomal RNA (5S rRNA) gene, 16S ribosomal RNA (16S rRNA) gene, 23S ribosomal RNA (23S rRNA) gene.] [LE:176] [RE:1663] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_11210316_c1_203 146 3918 195 64 166 1.9e-12 Description sp:[LN:YABO_BACSU] [AC:P37557] [GN:YABO] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 9.7 KD PROTEIN IN MFD-DIVIC INTERGENIC REGION] [SP:P37557] [DB:swissprot] >pir:[LN:S66089] [AC:S66089:F69739] [PN:conserved hypothetical protein yabO] [GN:yabO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005836:g467448] [LN:BAC180K] [AC:D26185] [PN:unknownil [OR:Bacillus subtilis] [SR:Bacillus subtilis(sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:131477] [RE:131737] [DI:direct] >gp:[GI:e1181992:g2632326] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37557] [LE:67875] [RE:68135] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_1292767_c3_243 147 3919 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_12929625_c1_186 148 3920 810 269 819 1.2e-81 Description sp:[LN:YAAT_BACSU] [AC:P37541] [GN:YAAT] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.2 KD PROTEIN IN XPAC-ABRB INTERGENIC REGION] [SP:P37541] [DB:swissprot] >pir:[LN:S66062] [AC:S66062:A69738] [PN:signal peptidase II homolog yaaT] [GN:yaaT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005810:g467422] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:105257] [RE:106084] [DI:direct] >gp:[GI:e1181965:g2632299] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaT] [FN:unknown) (OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to signal peptidase II] [SP:P37541] [LE:41655] [RE:42482] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_13759688_c1_184 149 3921 615 204 527 1.1e-50 Description sp:(LN:KTHY_BACSU] [AC:P37537] [GN:TMK] [OR:BACILLUS SUBTILIS] [EC:2.7.4.9] [DE:THYMIDYLATE KINASE, (DTMP KINASE)] [SP:P37537] [DB:swissprot] >pir:[LN:S66058] [AC:S66058:D69724] [PN:thymidylate kinase tmk] [GN:tmk] [CL:dTMP kinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005806:g467418] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:102759] [RE:103397] [DI:direct] >gp:[GI:e1181961:g2632295] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:thymidylate kinase] [GN:tmk] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.4.9] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name:yaaP] [SP:P37537] [LE:39157] [RE:39795] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_14460015_f1_55 150 3922 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_16484577_f2_119 151 3923 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_16522641_f2_76 152 3924 597 198 207 1.9e-16 Description gp:[GI:d1045277:g5106180] [LN:AP000064] [AC:AP000064] [PN:353aa long hypothetical protein] [GN:APE2475] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 7/7.] [NT:similar to OWL:AP00000385 percent identity:66.667] [LE:151512] [RE:152573] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_16594202_c2_237 153 3925 480 159 383 1.9e-35 Description sp:[LN:HPPK_BACSU] [AC:P29252] [GN:FOLK] [OR:BACILLUS SUBTILIS] [EC:2.7.6.3] [DE:(HPPK) (6-HYDROXYMETHYL-7,8-DIHYDROPTERIN PYROPHOSPHOKINASE) (PPPK)] [SP:P29252] [DB:swissprot] >pir:[LN:S66109] [AC:S66109:F37854:F69626] [PN:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase,:6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase:7, 8-dihydro-6-hydroxymethylpterin pyrophosphokinase] [GM:folK] [CL:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase:2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase homology] [OR:Bacillus subtilis] [EC:2.7.6.3] [DB:pir2] >gp:[GI:d1005856:g467468] [LM:BAC180K] [AC:D26185] [PM:7,8-dihydro-6-hydroxymethylpterin-pyrophosphokin] [GM:folk] [OR:Bacillus subtilis] [SR:Bacillus subtilis(sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:150545] [RE:151048] [DI:direct] >gp:[GI:e1182012:g2632346] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:7,8-dihydro-6-hydroxymethylpterin] [GM:folK] [FM:dihydrofolate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.6.3] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [LE:86943] [RE:87446] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_190875_f1_6 154 3926 210 69 70 0.028 Description pir:[LN:S69873] [AC:S69873] [PM:hypothetical protein YML009w-a] [OR:Saccharomyces cerevisiae] [DB:pir2] [MP:13L] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_194142_c1_194 155 3927 1386 461 1339 9.6e-137 Description pir:[LN:S66080] [AC:S66080:I40018:C69629:S05371:S18903] [PN UDP-N-acetylglucosamine pyrophosphorylase gcaD cell division protein tms26:tms protein] [GN:gcaD:tms26] [CL:N-acetylglucosamine-1-phosphate uridyltransferase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005827:g467439] [LN:BAC180K] [AC:D26185] [PN:temperature sensitive cell division] [GN:tms26] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA) [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:119952] [RE:121322] [DI:direct] >gp:[GI:e1181983:g2632317] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:UDP-N-acetylglucosamine pyrophosphorylase] [GN:gcaD] [FN peptidoglycan and lipopolysaccharide] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.23] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name:tms, tms26] [SP:P14192] [LE:56350] [RE:57720] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_20335927_f2_69 156 3928 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_211687_c3_261 157 3928 897 298 985 3.1e-99 Description sp:[LN:YACC_BACSU] [AC:P37565] [GN:YACC] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.8 KD PROTEIN IN FTSH-CYSK INTERGENIC REGION] [SP:P37565] [DB:swissprot] >pir:[LN:S66101] [AC:S66101:F69740] [PN:conserved hypothetical protein yacC] [GN:yacC] [CL:conserved hypothetical protein sll19881] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005848:g467460] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:143479] [RE:144354] [DI:direct] >gp:[GI:e1182004:g2632338] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yacC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37565] [LE:79877] [RE:80752] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_21579131_f3_157 158 3980 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_22694002_c3_258 159 3931 546 181 544 1.7e-52 Description sp:[LN:HPRT_BACSU] [AC:P37472] [GN:HPRT:HPT] [OR:BACILLUS SUBTILIS] [EC:2.4.2.8] [DE:(HGPRTASE)] [SP:P37472] [DB:swissprot] >pir:[LN:S66098] [AC:S66098:E69642] [PN:hypoxanthine phosphoribosyltransferase, hprT:hypoxanthine-guanine phosphoribosyltransferase hprT] [GN:hprT] [CL:hypoxanthine phosphoribosyltransferase] [OR:Bacillus subtilis] [EC:2.4.2.8] [DB:pir2] >gp:[GI:d1005845:g467457] [LN:BAC180K] [AC:D26185] [PN:hypoxanthine-guanine phosphoribosyltransferase] [GN:hprt] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:139944] [RE:140486] [DI:direct] >gp:[GI:e1182001:g2632335] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:hypoxanthine-guanine phosphoribosyltransferase] [GN:hprT] [FN:purine salvage] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.2.8] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37472] [LE:76342] [RE:76884] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_23445130_c1_207 160 3932 417 138 134 4.1e-08 Description gp:[GI:e1182000:g2632334] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yacA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to cell-cycle protein] [LE:74927] [RE:76345] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_23601702_c1_190 161 3933 891 296 919 3.1e-92 Description sp:[LN:KSGA_BACSU] [AC:P37468] [GN:KSGA] [OR:BACILLUS SUBTILIS] [EC:2.1.1.-] [DE:DIMETHYLTRANSFERASE)] [SP:P37468] [DB:swissprot] >pir:[LN:S66071] [AC:S66071:A69649] [PN:dimethyladenosine transferase ksgA:high level kasgamycin resistance protein ksgA] [GN:ksgA] [CL:rRNA (adenine-N6-)-methyltransferase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005819:g467431] [LN:BAC180K] [AC:D26185] [PN:high level kasgamycin resistance] [GN:ksgA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:114240] [RE:115118] [DI:direct] >gp:[GI:e1181975:g2632309] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:dimethyladenosine transferase] [GN:ksgA] [FN:high level kasugamycin resistance] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.1.-] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37468] [LE:50638] [RE:51516] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_23605438_c2_238 162 3934 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_2361327_c3_250 163 3935 966 321 1225 1.1e-124 Description gp:[GI:g2289093] [LN:CAU76387] [AC:U76387] [PN:PRPP synthetase] [GN:prs] [OR:Corynebacterium ammoniagenes] [DB:genpept-bct1] [EC:2.7.6.1] [DE:Corynebacterium ammoniagenes N-acetyl glucoseamine 1-phosphateuridyltransferase (glmU) gene, partial cds, and PRPP-synthetase(prs) gene, complete cds.] [LE:321] [RE:1274] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_23642135_c1_185 164 3936 357 118 389 4.5e-36 Description sp:[LN:YAAQ_BACSU] [AC:P37538] [GN:YAAQ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 12.0 KD PROTEIN IN XPAC-ABRB INTERGENIC REGION] [SP:P37538] [DB:swissprot] >pir:[LN:S66059] [AC:S66059:G69737] [PN:conserved hypothetical protein yaaQ] [GN:yaaQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005807:g467419] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:103471] [RE:103800] [DI:direct] >gp:[GI:e1181962:g2632296] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37538] [LE:39869] [RE:40198] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_23860952_c1_206 165 3937 882 293 304 4.5e-27 Description gp:[GI:g4981097] [LN:AE001733] [AC:AE001733:AE000512] [PN:conserved hypothetical protein] [GN:TM0579] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 45 of 136 of the complete genome.] [NT:similar to GB:AE000657 percent identity:59.32;] [LE:230] [RE:1474] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_24350952_f3_120 166 3938 132 43 72 0.017 Description pir:[LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_24647936_c3_256 167 3939 408 135 172 4.4e-13 Description gp:[GI:g4090866] [LN:AF023181] [AC:AF023181] [PN:DivIC homolog] [GN:divL] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes transcription-repair coupling factor (mfdL), low temperature requirement B protein (ltrB), and DivIC homolog(divL) genes, complete cds.] [LE:6077] [RE:6463] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_24649092_c2_236 168 3940 378 125 351 4.7e-32 Description sp:[LN:FOLB_STAHA] [AC:Q59920] [GN:FOLB:FOLQ] [OR:STAPHYLOCOCCUS HAEMOLYTICUS] [EC:4.1.2.25] [DE:DIHYDRONEOPTERIN ALDOLASE, (DHNA) (FRAGMENT)] [SP:Q59920] [DB:swissprot] >gp:[GI:g1118003] [LN:SHU40768] [AC:U40768] [PN:dihydroneopterin aldolase] [GN:folQ] [OR:Staphylococcus haemolyticus] [DB:genpept-bct2] [EC:4.1.2.25] [DE:Staphylococcus haemolyticus cysteine synthase A (cysK) and dihydroneopterin aldolase (folQ) genes, partial cds, and dihydropteroate synthase (folP) gene, complete cds.] [NT:DHNA] [LE:1467] [RE:>1724] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_24663892_c3_251 169 3941 1881 626 1224 1.5e-124 Description sp:[LN:MFD_BACSU] [AC:P37474] [GN:MFD] [OR:BACILLUS SUBTILIS] [DE:TRANSCRIPTION-REPAIR COUPLING FACTOR (TRCF)] [SP:P37474] [DB:swissprot] >pir:[LN:S66085] [AC:S66085:F69657] [PN:transcription-repair coupling factor mfd] [GN:mfd] [CL:transcription-repair coupling protein:DEAD/H box helicase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005832:g467444] [LN:BAC180K] [AC:D26185] [PN:transcription-repair coupling factor] [GN:mfd] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:124030] [RE:127563] [DI:direct] >gp:[GI:e1181988:g2632322] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:transcription-repair coupling factor] [GN:mfd] [FN:probably involved in homologous DNA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37474] [LE:60428] [RE:63961] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_24734661_f1_13 170 3942 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_24790916_c1_208 171 3943 2106 701 2133 6.9e-221 Description sp:[LN:FTSH_BACSU] [AC:P37476] [GN:FTSH] [OR:BACILLUS SUBTILIS] [EC:3.4.24.-] [DE:CELL DIVISION PROTEIN FTSH HOMOLOG,] [SP:P37476] [DB:swissprot] >pir:[LN:E69627] [AC:E69627:566099] [PN:cell-division protein/general stress protein ftsH:class III heat shock protein ftsH] [GN:ftsH] [CL:cell division protein ftsH:FtsH/SEC18/CDC48-type ATP-binding domain homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005846:g467458] [LN:BAC180K] [AC:D26185] [PN:cell division protein] [GN:ftsH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:140584] [RE:142497] [DI:direct] >gp:[GI:e1182002:g2632336] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:cell-division protein and general stress protein] [GN:ftsH] [FN:involved in major cellular processes such as] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.4.24.-] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [LSP:P37476] [LE:76982] [RE:78895] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_25662965_c1_195 172 3944 729 242 463 6.4e-44 Description sp:[LN:CTC_BACSU] [AC:P14194] [GN:CTC] [OR:BACILLUS SUBTILIS] [DE:GENERAL STRESS PROTEIN CTC] [SP:P14194] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_26210061_f2_99 173 3945 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_26839660_c3_246 174 3946 855 284 842 4.4e-84 Description gp:[GI:e1386912:g4454322] [LN:SAU132803] [AC:AJ132803] [PN:hypothetical protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus ORF1 and ORF2 (partial).] [NT:ORF2] [LE:1402] [RE:>2052] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_2928502_c3_262 175 3947 960 319 1166 2.1e-118 Description sp:[LN:CYSK_BACSU] [AC:P37887] [GN:CYSK] [OR:BACILLUS SUBTILIS] [EC:4.2.99.8] [DE:PROTEIN 11) (SOI11)] [SP:P37887] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_29298162_f2_118 176 3948 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_29307187_c2_213 177 3949 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_31446881_c2_215 178 3950 351 116 194 2.1e-15 Description sp:[LN:YABA_BACSU] [AC:P37542] [GN:YABA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 14.1 KD PROTEIN IN XPAC-ABRB INTERGENIC REGION] [SP:P37542] [DB:swissprot] >pir:[LN:S66063] [AC:S66063:B69738] [PN:hypothetical protein yabA] [GN:yabA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005811:g467423] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:106099] [RE:106458] [DI:direct] >gp:[GI:e1181966:g2632300] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37542] [LE:42497] [RE:42856] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_32615811_f3_166 179 3951 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_33225017_c2_222 180 3952 867 288 792 8.8e-79 Description sp:[LN:PURR_BACSU] [AC:P37551] [GN:PURR] [OR:BACILLUS SUBTILIS] [DE:PUR OPERON REPRESSOR] [SP:P37551] [DB:swissprot] >pir:[LN:S66076] [AC:S66076:D69685] [PN:transcription repressor of purine operon purR] [GN:purR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005824:g467436] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:118041] [RE:118898] [DI:direct] >gp:[GI:e1181980:g2632314] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:transcriptional regulator] [GN:purR] [FN:negative regulation of the purine operon] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name:yabI] [SP:P37551] [LE:54439] [RE:55296] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_33313817_c1_192 181 3953 333 110 323 4.4e-29 Description sp:[LN:SP5G_BACME] [AC:P28016] [GN:SPOVG] [OR:BACILLUS MEGATERIUM] [DE:STAGE V SPORULATION PROTEIN G] [SP:P28016] [DB:swissprot] >pir:[LN:S18900] [AC:S18900] [PN:spoVG protein] [CL:stage V sporulation protein spoVG] [OR:Bacillus megaterium] [DB:pir2] >gp:[GI:g39656] [LN:BMSPOVG] [AC:X62377] [GN:spoVG] [OR:Bacillus megaterium] [DB:genpept-bct1] [DE:B. megaterium spoVG and tms genes.] [SP:P28016] [LE:31] [RE:321] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_34001510_c2_218 182 3954 798 265 916 6.4e-92 Description sp:[LN:YABD_BACSU] [AC:P37545] [GN:YABD] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 29.2 KD PROTEIN IN METS-KSGA INTERGENIC REGION] [SP:P37545] [DB:swissprot] >pir:[LN:S66068] [AC:S66068:E69738] [PN:conserved hypothetical protein yabD] [GN:yabD] [CL:hypothetical protein HI0454] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005816:g4G7428] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:111306] [RE:112073] [DI:direct] >gp:[GI:e1181972:g2632306] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37545] [LE:47704] [RE:48471] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_34428515_c1_191 183 3955 285 94 284 6.0e-25 Description sp:[LN:VEG_BACSU] [AC:P37466] [GN:VEG] [OR:BACILLUS SUBTILIS] [DE:VEG PROTEIN] [SP:P37466] [DB:swissprot] >pir:[LN:S66073] [AC:S66073:C69730] [PN:hypothetical protein veg] [GN:veg] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005821:g467433] [LN:BAC180K] [AC:D26185] [PN:unknown] [GN:veg] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:116363] [RE:11.6623] [DI:direct] >gp:[GI:e1181977:g2632311] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:veg] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37466] [LE:52761] [RE:53021] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_34571011_c3_252 184 3956 1608 535 1712 2.8e-176 Description sp:[LN:MFD_BACSU] [AC:P37474] [GN:MFD] [OR:BACILLUS SUBTILIS] [DE:TRANSCRIPTION-REPAIR COUPLING FACTOR (TRCF)] [SP:P37474] [DB:swissprot] >pir:[LN:S66085] [AC:S66085:F69657] [PN:transcription-repair coupling factor mfd] [GN:mfd] [CL:transcription-repair coupling protein:DEAD/H box helicase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005832:g467444] [LN:BAC180K] [AC:D26185] [PN:transcription-repair coupling factor] [GN:mfd] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:124030] [RE:127563] [DI:direct] >gp:[GI:e1181988:g2632322] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:transcription-repair coupling factor] [GN:mfd] [FN:probably involved in homologous DNA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37474] [LE:60428] [RE:63961] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_35260887_c1_193 185 3957 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_3553_c3_245 186 3958 972 323 382 2.5e-35 Description sp:[LN:HOLB_BACSU] [AC:P37540] [GN:HOLB] [OR:BACILLUS SUBTILIS] [EC:2.7.7.7] [DE:DNA POLYMERASE III, DELTA′ SUBUNIT,] [SP:P37540] [DB:swissprot] >pir:[LN:S66061] [AC:S66061:C69642] [PN:DNA polymerase III (delta′ subunit) holB:dnaH homolog holB] [GN:holB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005809:g467421] [LN:BAC180K] [AC:D26185] [PN:similar to B. subtilis DnaH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:104265] [RE:105254] [DI:direct] >gp:[GI:e1181964:g2632298] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:DNA polymerase III (delta′ subunit)] [GN:holB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.7] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name:yaaS) (SP:P37540] [LE:40663] [RE:41652] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_3916087_c2_216 187 3959 261 86 243 1.3e-20 Description pir:[LN:A69742] [AC:A69742] [PN:conserved hypothetical protein yazA] [GN:yazA] [CL:hypothetical protein 312] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181968:g2632302] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yazA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [LE:43645] [RE:43944] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_3937950_f2_71 188 3960 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_3938838_c1_210 189 3961 846 281 1087 4.8e-110 Description sp:[LN:DHPS_STAHA] [AC:Q59919] [GN:FOLP] [OR:STAPHYLOCOCCUS HAEMOLYTICUS] [EC:2.5.1.15] [DE:PYROPHOSPHORYLASE) (DHPS)] [SP:Q59919] [DB:swissprot] >gp:[GI:g1118002] [LN:SHU40768] [AC:U40768] [PN:dihydropteroate synthase] [GN:folP] [OR:Staphylococcus haemolyticus] [DB:genpept-bct2] [EC:2.5.1.15] [DE:Staphylococcus haemolyticus cysteine synthase A (cysK) and dihydroneopterin aldolase (folQ) genes, partial cds, and dihydropteroate synthase (folP) gene, complete cds.] [NT:DHPS] [LE:692] [RE:1495] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_4034707_f2_114 190 3962 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_4723192_c1_196 191 3963 606 201 539 5.7e-52 Description sp:[LN:SP5C_BACSU] [AC:P37470] [GN:SPOVC:PTH] [OR:BACILLUS SUBTILIS] [EC:3.1.1.29] [DE:SPORULATION PROTEIN C)] [SP:P37470] [DB:swissprot] >pir:[LN:C69715] [AC:C69715:S66083] [PN:stage V sporulation protein spoVC:spore coat formation protein spoVC] [GN:spoVC] [CL:peptidyl-tRNA hydrolase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005830:g4674421 [LN:BAC180K] [AC:D26185] [PN:stage V sporulation] [GN:spoVC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:123104] [RE:123670] [DI:direct] >gp:[GI:e1181986:g2632320] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:spoVC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:thermosensitive mutant blocks spore coat formation] [SP:P37470] [LE:59502] [RE:60068] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_4775312_c3_257 192 3964 405 134 436 4.7e-41 Description sp:[LN:YABR_BACSU] [AC:P37560] [GN:YABR] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 14.2 KD PROTEIN IN DIVIC-SPOIIE INTERGENIC REGION] [SP:P37560] [DB:swissprot] >pir:[LN:C53380] [AC:C53380:S66093:A69740] [PN:polyribonucleotide nucleotidyltransferase homolog yabR:divIC 3′-region hypothetical protein] [GN:yabR] [CL:polyribonucleotide nucleotidyltransferase homolog yabR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005840:g467452] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:133226] [RE:133612] [DI:direct] >gp:[GI:g385178] [LN:BACDIVIC] [AC:L23497] [PN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis cell division protein (divIC) gene, complete cds, transfer RNA genes, complete sequence and sporulation protein (spoIIE) gene, 5′ end of cds.] [NT:orf128; homologous to RNA binding domain of E. coli] [LE:914] [RE:1300] [DI:direct] >gp:[GI:e1181996:g2632330] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to polyribonucleotide] [SP:P37560] [LE:69624] [RE:70010] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_4884625_c1_189 193 3965 549 182 445 5.2e-42 Description sp:[LN:YABF_BACSU] [AC:P37547] [GN:YABF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 20.7 KD PROTEIN IN METS-KSGA INTERGENIC REGION] [SP:P37547] [DB:swissprot] >pir:[LN:S66070] [AC:S66070:G69738] [PN:conserved hypothetical protein yabF] [GN:yabF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005818:g467430] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:113687] [RE:114247] [DI:direct] >gp:[GI:e1181974:g2632308] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37547] [LE:50085] [RE:50645] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_5317151_c3_264 194 3966 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_5344015_c3_255 195 3967 1281 426 849 8.0e-85 Description sp:[LN:YABN_BACSU] [AC:P37556] [GN:YABN] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 56.1 KD PROTEIN IN MFD-DIVIC INTERGENIC REGION] [SP:P37556] [DB:swissprot] >pir:[LN:S66088] [AC:S66088:E69739] [PN:conserved hypothetical protein yabN:beta-lactamase regulatory protein homolog yabN] [GN:yabN] [CL:beta-lactamase regulatory protein homolog:beta-lactamase regulatory protein homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005835:g467447] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:130005] [RE:131474] [DI:direct] >gp:[GI:e1181991:g2632325] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37556] [LE:66403] [RE:67872] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_5367813_c3_244 196 3968 543 180 432 1.2e-40 Description sp:[LN:ATDA_ECOLI] [AC:P37354] [GN:SPEG] [OR:ESCHERICHIA COLI] [EC:2.3.1.57] [DE:ACETYLTRANSFERASE) (SAT)] [SP:P37354] [DB:swissprot] >gp:[GI:d1016007:g1742583] [LN:D90799] [AC:D90799:AB001340] [PN:Spermidine N1-acetyltransferase (EC 2.3.1.57)] [GN:speG] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #308(35.3–35.7 min.).] [NT:ORF ID:o309#16; similar to [SwissProt Accession] [LE:<18154] [RE:18711] [DI:direct] >gp:[GI:d1016029:g1742606] [LN:D90800] [AC:D90800:AB001340] [PN:Spermidine N1-acetyltransferase (EC 2.3.1.57)] [GN:speG] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise) [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #309(35.4–35.7 min.).] [NT:ORF_ID:o309#16; similar to [SwissProt Accession] [LE:<14930] [RE:15487] [DI:direct] >gp:[GI:d1016031:g1742609] [LN:D90801] [AC:D90801:AB001340] [PN:Spermidine N1-acetyltransferase (EC 2.3.1.57)] [GN:speG] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #310(35.7–36.0 min).] [NT:ORF_ID:o309#16; similar to [SwissProt Accession] [LE:<814] [RE:1371] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_581260_f3_137 197 3969 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_6015842_c3_249 198 3970 900 299 750 2.5e-74 Description sp:[LN:YABH_BACSU] [AC:P37550] [GN:YABH] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.7 KD PROTEIN IN SSPF-PURR INTERGENIC REGION (ORF1)] [SP:P37550] [DB:swissprot] >pir:[LN:S66075] [AC:S66075:A69739] [PN:conserved hypothetical protein yabH] [GN:yabH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005823:g467435] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:117116] [RE:117985] [DI:direct] >gp:[GI:e1181979:g2632313] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37550] [LE:53514] [RE:54383] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_6136562_c2_223 199 3971 402 133 361 4.1e-33 Description sp:[LN:YABJ_BACSU] [AC:P37552] [GN:YABJ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 13.7 KD PROTEIN IN PURR-SPOVG INTERGENIC REGION (ORF2)] [SP:P37552] [DB:swissprot] >pir:[LN:S66077] [AC:S66077:B69739 [PN:conserved hypothetical protein yabJ] [GN:yabJ] [CL:hypothetical protein HI0719] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005825:g467437] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:118895] [RE:119272] [DI:direct] >gp:[GI:e1181981:g2632315] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37552] [LE:55293] [RE:55670] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_6742943_c2_217 200 3972 1983 660 2292 9.8e-238 Description sp:[LN:SYM_BACSU] [AC:P37465] [GN:METS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.10] [DE:[METRS)] [SP:P37465] [DB:swissprot] >pir:[LN:S66067] [AC:S66067:E69657] [PN:methionine- -tRNA ligase, metS:methionyl-tRNA synthetase mets] [GN:metS] [CL:methionine- -tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.10] [DB:pir2] >gp:[GI:d1005815:g467427] [LN:BAC180K] [AC:D26185] [PN:methionyl-tRNA synthetase] [GN:metS] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:109233] [RE:111227] [DI:direct] >gp:[GI:e1181971:g2632305] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:methionyl-tRNA synthetase] [GN:metS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.10] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37465] [LE:45631] [RE:47625] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_6834427_c2_227 201 3973 150 49 93 0.00010 Description sp:[LN:YABO_BACSU] [AC:P37557] [GN:YABO] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 9.7 KD PROTEIN IN MFD-DIVIC INTERGENIC REGION] [SP:P37557] [DB:swissprot] >pir:[LN:S66089] [AC:S66089:F69739] [PN:conserved hypothetical protein yabO] [GN:yabO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005836:g467448] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:131477] [RE:131737] [DI:direct] >gp:[GI:e1181992:g2632326] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yabO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to hypothetical proteins] [SP:P37557] [LE:67875] [RE:68135] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_7036526_c1_212 202 3974 159 52 86 0.00057 Description pir:[LN:C64571] [AC:C64571] [PN:hypothetical protein HP0411] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313526] [LN:AE000557] [AC:AE000557:AE000511] [PN:H. pylori predicted coding region HP0411] [GN:HP0411] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 35 of 134 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:3068] [RE:3385] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_761_c1_187 203 3975 750 249 919 3.1e-92 Description gp:[GI:e1386911:g4454321] [LN:SAU132803] [AC:AJ132803] [PN:hypothetical protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE Staphylococcus aureus ORF1 and ORF2 (partial).] [NT:ORF1] [LE:434] [RE:1159] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_829800_c1_201 204 3976 1575 524 700 4.9e-69 Description gp:[GI:g4090864] [LN:AF023181] [AC:AF023181] [PN:low temperature requirement B protein] [GN:ltrB] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes transcription-repair coupling factor (mfdL), low temperature requirement B protein (ltrB), and DivIC homolog(divL) genes, complete cds.] [LE:3972] [RE:5546] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_976638_c1_183 205 3977 1371 456 556 9.0e-54 Description sp:[LN:YAAO_BACSU] [AC:P37536] [GN:YAAO] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 53.2 KD PROTEIN IN XPAC-ABRB INTERGENIC REGION] [SP:P375363 [DB:swissprot] >pir:[LN:S66057] [AC:S66057:F69737] [PN:lysine decarboxylase homolog yaaO] [GN:yaaO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005805:g467417] [LN:BAC180K] [AC:D26185] [PN:similar to lysine decarboxylase] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:101320] [RE:102762] [DI:direct] >gp:[GI:e1181960:g2632294] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to lysine decarboxylase] [SP:P37536] [LE:37718] [RE:39160] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000980_9876005_f3_159 206 3978 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_10392555_f3_17 207 3979 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_134392_f3_23 208 3980 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_1385927_f3_22 209 3981 369 122 85 0.039 Description gp:[GI:e1332543:g3763999] [LN:PFMAL3P4] [AC:AL008970] [GN:MAL3P4.1] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P4, complete sequence.] [NT:predicted using hexExon; MAL3P4.1 (PFC0570c),] [LE:106887:107747] [RE:107641:108206] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_14882135_f2_11 210 3982 2112 703 167 1.6e-09 Description sp:[LN:MELR_ECOLI] [AC:P10411] [GN:MELR] [OR:ESCHERICHIA COLI] [DE:MELIBIOSE OPERON REGULATORY PROTEIN] [SP:P10411] [DB:swissprot] >pir:[LN:RGECMB] [AC:A29625:S56347:E6522] [PN:melibiose operon regulatory protein] [GN:melR] [CL:arabinose operon regulatory protein] [OR:Escherichia coli] [DB:pir1] [MP:93 mm ] >gp:[GI:g536963] [LN:ECOUW93] [AC:U14003] [GN:melR] [FN:regulatory gene] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [NT:CG Site No. 18166] [LE:31548] [RE:32456] [DI:complement] >gp:[GI:g1790559] [LN:AE000484] [AC:AE000484:U00096] [PN:regulator of melibiose operon] [GN:melR] [FN:regulator; Degradation of small molecules:] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 374 of 400 of the complete genome.] [NT:f302; CG Site No. 18166] [LE:5093] [RE:6001] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_23634578_f3_18 211 3983 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_23860887_f2_13 212 3984 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_25634627_f2_12 213 3985 468 155 290 1.4e-25 Description sp:[LN:GS26_BACSU] [AC:P80238:P96580] [GN:YDAG] [OR:BACILLUS SUBTILIS] [DE:GENERAL STRESS PROTEIN 26 (GSP26)] [SP:P80238:P96580] [DB:swissprot] >pir:[LN:G69768] [AC:G69768] [PN:general stress protein homolog ydaG] [GN:ydaG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020013:g1881233] [LN:AB001488] [AC:AB001488] [GN:ydaG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:6862] [RE:7284] [DI:direct] >gp:[GI:e1182388:g2632722] [LN:BSUB0003] [AC:Z99106:AL00912G] [GN:ydaG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:alternate gene name:yzzA; similar to general] [SP:P80238] [LE:70606] [RE:71028] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_2584538_c1_29 214 3986 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_29352342_c2_36 215 3987 1296 431 1218 6.3e-124 Description sp:[LN:GLTT_BACST] [AC:P24943] [GN:GLTT] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:PROTEIN)] [SP:P24943] [DB:swissprot) >pir:[LN:S26247] [AC:S26247] [PN:glutamate/aspartate transport protein:sodium/proton-glutamate symport protein] [GN:gltP] [OR:Bacillus stearothermophilus] [DB:pir2] >gp:[GI:g143000] [LN:BACGLTPA] [AC:M86508] [PN:proton glutamate symport protein] [GN:gltP] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (library:ATCC 7954) DNA] [DB:genpept-bct1] [DE:Bacillus stearothermophilus proton glutamate symport protein (gltP)gene, complete cds.] [LE:110] [RE:1375] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_30081465_c2_37 216 3988 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_32242200_f1_2 217 3989 378 125 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_3396042_c1_34 218 3990 315 104 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_34179828_c2_35 219 3991 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_4100336_f2_10 220 3992 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_6511652_c3_51 221 3993 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000981_822786_c1_33 222 3994 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10031712_c1_1057 223 3995 990 329 597 4.1e-58 Description sp:[LN:YQJA_BACSU] [AC:P54538] [GN:YQJA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 37.1 KD PROTEIN IN BMRU-ANSR INTERGENIC REGION] [SP:P54538] [DB:swissprot] >pir:[LN:A69963] [AC:A69963] [PN:hypothetical protein yqjA] [GN:yqjA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013287:g1303952] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:229147] [RE:230115] [DI:direct] >gp:[GI:e1185663:g2634829] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P54538] [LE:93504] [RE:94472] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10312561_c3_1455 224 3996 1236 411 996 2.1e-100 Description sp:[LN:RS1H_BACSU] [AC:P38494] [GN:YPFD:JOFD] [OR:BACILLUS SUBTILIS] [DE:30S RIBOSOMAL PROTEIN S1 HOMOLOG] [SP:P38494] [DB:swissprot] >pir:[LN:B69935] [AC:B69935] [PN:ribosomal protein S1 homolog homolog ypfD] [GN:ypfD] [CL:Synechocystis ribosomal protein S1] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g533106] [LN:BSU11687] [AC:U11687] [PN:unknown] [GN:jofD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 jofA, jofB, MssA homolog (jofC) and ribosomal protein S1 homolog (jofD) genes, complete cds, and joeB gene, partial cds.] [NT:similar to the Escherichia coli S1 ribosomal] [LE:2651] [RE:3799] [DI:direct] >gp:[GI:e1183733:g2634706] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypfD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:alternate gene name:jofD; similar to ribosomal] [SP:P38494] [LE:198361] [RE:199509] [DI:complement] >gp:[GI:g1146215] [LN:BACSERA] [AC:L47648] [GN:ypfD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependentglycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:similar to Escherichia coli Si ribosomal protein;] [LE:16888] [RE:18036] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10334752_f1_178 225 3997 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10588877_f3_947 226 3998 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10635918_c2_1290 227 3999 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10642180_c3_1513 228 4000 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10666068_c2_1228 229 4001 330 109 196 1.3e-15 Description sp:[LN:CMG3_BACSU] [AC:P25955] [GN:COMGC:COMG3] [OR:BACILLUS SUBTILIS] [DE:COMG OPERON PROTEIN 3 PRECURSOR] [SP:P25955] [DB:swissprot] >pir:[LN:D30338] [AC:D30338:A35133:D69603] [PN:exogenous DNA-binding protein comGC:comG operon protein 3] [GN:comGC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142708] [LN:BACCOMGA] [AC:M29691:M22854] [GN:comG3] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168) (clone:pED4) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis (clone pED4) comG- (1, 2, 3, 4, 5, 6, and 7) proteins incomG operon, complete cds.] [LE:3405] [RE:3701] [DI:direct] >gp:[GI:d1013214:g1303879] [LN:BACJHG42] [AC:D84432:D82370] [PN:ComGC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)] DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:161635] [RE:161931] [DI:direct] >gp:[GI:e1185739:g2634905] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:comGC] [FN:exogenous DNA-binding (competence)] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P25955] [LE:161690] [RE:161986] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1070437_c3_1482 230 4002 894 297 727 6.8e-72 Description sp:[LN:YPCP_BACSU] [AC:P54161] [GN:YPCP] [OR:BACILLUS SUBTILIS] [EC:3.1.11.-] [DE:POTENTIAL 5′-3′ EXONUCLEASE,] [SP:P54161] [DB:swissprot] >pir:[LN:H69933] [AC:H69933] [PN:5′-3′ exonuclease homolog ypcP] [GN:ypcP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256623] [LN:BACYACA] [AC:L77246] [PN:exodeoxyribonuclease] [GN:ypcP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:36.1% identity with 219 aa at the 5′ end of the] [LE:9565] [RE:10455] [DI:direct] >gp:[GI:e1183647:g2634620] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypcP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to 5′-3′ exonuclease] [SP:P54161] [LE:114697] [RE:115587] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10938927_f2_492 231 4003 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_10969050_c2_1193 232 4004 1596 531 1815 3.5e-187 Description sp:[LN:LEPA_BACSU] [AC:P37949] [GN:LEPA] [OR:BACILLUS SUBTILIS] [DE:GTP-BINDING PROTEIN LEPA] [SP:P37949] [DB:swissprot] >pir:[LN:G69649] [AC:G69649] [PN:GTP-binding protein lepA] [GN:lepA] [CL:GTP-binding membrane protein lepA:translation elongation factor Tu homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013139:g1303804] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqeQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:86866] [RE:88704] [DI:direct] >gp:[GI:e200671:g1122398] [LN:BSLEPORF] [AC:X91655] [GN:lepA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis lepA and hemN genes.] [SP:P37949] [LE:128] [RE:1966] [DI:direct] >gp:[GI:e1183781:g2634997] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:GTP-binding protein] [GN:lepA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:alternate gene name:yqxB, yqeQ] [SP:P37949] [LE:30726] [RE:32564] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_11194067_c3_1378 233 4005 747 248 431 1.6e-40 Description sp:[LN:YQEM_BACSU] [AC:P54458] [GN:YQEM] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 28.3 KD PROTEIN IN AROD-COMER INTERGENIC REGION] [SP:P54458] [DB:swissprot] >pir:[LN:A69952] [AC:A69952] [PN:conserved hypothetical protein yqeM] [GN:yqeM] [CL:bioC homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013129:g1303794] [LN:BACJH642] [AC:D84432:D82370] [PN:YqeM] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheAl)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:76770] [RE:77513] [DI:direct] >gp:[GI:e1183791:g2635007] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqeM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [LE:41917] [RE:42660] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_11203763_c1_985 234 4006 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_11881313_f1_285 235 4007 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_12116562_f2_354 236 4008 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1218750_c1_996 237 4009 681 226 336 1.8e-30 Description gp:[GI:g3211753] [LN:AF052208] [AC:AF052208] [PN:competence protein] [GN:celA] [OR:Streptococcus pneumoniae] DB:genpept-bct2] [DE:Streptococcus pneumoniae competence protein (celA) and competence protein (celB) genes, complete cds; and unknown gene.] [LE:266] [RE:916] [DI:direct ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1226553_c2_1270 238 4010 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1229750_c3_1419 239 4011 468 155 505 2.3e-48 Description gp:[GI:e1363305:g4127534] [LN:BSAJ10954] [AC:AJ010954] [PN:arginine repressor] [GN:argR] [FN:ADN binding protein] [OR:Bacillus stearothermophilus] [DB:genpept-bct1] [DE: Bacillus stearothermophilus argR gene and partial recN gene.] [LE:196] [RE:645] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1345752_f3_780 240 4012 945 314 720 3.8e-71 Description sp:[LN:YQKF_BACSU] [AC:P54569] [GN:YQKF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL OXIDOREDUCTASE IN ANSR-BMRU INTERGENIC REGION] [SP:P54569] [DB:swissprot] >pir:[LN:H69966] [AC:H69966] [PN:conserved hypothetical protein yqkF] [GN:yqkF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013318:g1303983] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqkF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:259404] [RE:260324] [DI:complement] >gp:[GI:e1185631:g2634797] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqkF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to hypothetical proteins] [SP:P54569] [LE:63295] [RE:64215] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1359450_f2_544 241 4013 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_136068_f1_227 242 4014 1404 467 1201 4.0e-122 Description pir:[LN:D70585] [AC:D70585] [PN:probable glyS protein] [GN:glyS] [CL:Mycoplasma genitalium glycine- -tRNA ligase] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e315164:g20780432 [LN:MTCY27] [AC:Z95208:AL123456] [PN:glyS] [GN:glyS] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 104/162.] [NT:Rv2357c, (MTCY27.23-MTCY98.26), len:463 aa. glyS,] [LE:19] [RE:1410] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_13674130_f3_703 243 4015 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_13853500_f2_374 244 4016 246 81 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_13876943_c1_1122 245 4017 1488 495 882 2.6e-88 Description pir:[LN:B69610] [AC:B69610:JC5744] [PN:carboxy-terminal processing proteinase ctpA,:tail-specific endopeptidase Prc] [GN:ctpA] [CL:carboxyl-terminal processing proteinase] [OR:Bacillus subtilis] [EC:3.4.99.-] [DB:pir2] >gp:[GI:g2529476] [LN:AF006665] [AC:AF006665] [PN:OrfRM1] [GN:orfRM1] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 region at 182 min containing the cge genecluster.] [NT:similar to the E. coli Prc and carboxyl-terminal] [LE:22886] [RE:24286] [DI:direct] >gp:[GI:g2415395] [LN:AF015775] [AC:AF015775] [PN:proteinase] [GN:ctpA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis YodA (yodA), YodB (yodB), YodC (yodC), YodD(yodD), ABC-transporter (yodE), permease (yodF), proteinase (ctpA), YodH (yodH), YodI (yodI), carboxypeptidase (yodJ), purinenucleoside phosphorylase (deoD), YodL (yodL), YodN (yodM), YodN(yodN), YodO CyodO), YodP (yodP), acetylornitine deacetylase (argE), butirate-acetoacetate CoA transferase (yodR) , butyrateace toacetate-CoA transferase (yodS), YodT (yodT), CgeE (cgeE), CgeD(cgeD), CgeC (cgeC), CgeA (cgeA), CgeB (cgeB), YzxA (yzxA), UDP-glucose epimerase (yodU), YodV CyodV), and YodW (yodW) genes, complete cds; and YodZ (yodZ) gene, partial cds.] [NT:similar to Synechocystis sp. PCC6803] [LE:5846] [RE:7246] [DI:complement] >gp:[GI:e1185430:g2634351] [LN:BSUB001l] [AC:Z99114:AL009126] [PN:carboxy-terminal processing protease] [GN:ctpA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [NT:alternate gene name:yzbD] [LE:130976] [RE:132376] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_14097011_c3_1411 246 4018 612 203 522 3.6e-50 Description sp:[LN:ARGJ_BACST] [AC:Q07908] [GN:ARGJ] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:2.3.1.35:2.3.1.1] [DE:ACETYLTRANSFERASE, (N-ACETYLGLUTAMATE SYNTHASE) (AGS)] [SP:Q07908] [DB:swissprot] >pir:[LN:I39766] [AC:I39766] [PN:glutamate N-acetyltransferase,] [GN:argJ] [CL:glutamate N-acetyltransferase argJ] [OR:Bacillus stearothermophilus] [EC:2.3.1.35] [DB:pir2] >gp:LGI:g304135] [LN:BACACETYL] [AC:L06036] [PN:ornithine acetyltransferase] [GN:argJ] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain NCIB 8224) DNA] [DB:genpept-bct1] [EC:2.3.1.35] [DE:Bacillus stearothermophilus ornithine acetyltransferase (argJ) and acetylglutamate kinase (argB) genes, complete cds's, argC gene, 3′ end, and argD gene, 5′ end.] [NT:also bears acetyl-CoA:L-glutamate] [LE:902] [RE:2134] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_14259631_c1_967 247 4019 1068 355 1207 9.3e-123 Description sp:[LN:QUEA_BACSU] [AC:O32054] [GN:QUEA] [OR:BACILLUS SUBTILIS] [EC:5.-.-.-] [DE:[QUEUOSINE BIOSYNTHESIS PROTEIN QUEA)] [SP:O32054] [DB:swissprot] >pir:[LN:A69688] [AC:A69688] [PN:S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine biosynthesis-related protein queA] [GN:queA] [CL:S-adenosylmethionine:tRNA ribosyltransferase-isomerase] [OR:Bacillus subtilis] [EC:5.-.-.-] [DB:pir2] >gp:[GI:e1184021:g2635237] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:S-adenosylmethionine tRNA ribosyltransferase] [GN:queA] [FN:queuosine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O32054] [LE:38030] [RE:39058] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_14460932_f1_322 248 4020 177 58 226 8.4e-19 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_14507827_f1_87 249 4021 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_14508567_c3_1357 250 4022 276 91 184 2.4e-14 Description pir:[LN:E69972] [AC:E69972] [PN:conserved hypothetical protein yrbF] [GN:yrbF] [CL:yajC protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184019:g2635235] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yrbF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [LE:36555] [RE:36824] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_14881687_c2_1226 251 4023 993 330 1448 2.7e-148 Description sp:[LN:GLK_STAXY] [AC:Q56198] [GN:GLKA] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:2.7.1.2] [DE:GLUCOKINASE, (GLUCOSE KINASE)] [SP:Q56198] [DB:swissprot] >pir:[LN:S52352] [AC:S52352] [PN:glucose kinase] [CL:glucose kinase:glucose kinase homology] [OR:Staphylococcus xylosus] [DB:pir2] >gp:[GI:g666116] [LN:SXGKG2] [AC:X84332] [PN:glucose kinase] [GN:glkA] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S. xylosus glucose kinase gene.] [SP:Q5G198] [LE:973] [RE:1959] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_15031535_f2_658 252 4024 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_15728386_c3_1356 253 4025 1143 380 1542 2.9e-158 Description sp:[LN:TGT_BACSU] [AC:O32053] [GN:TGT] [OR:BACILLUS SUBTILIS] [EC:2.4.2.29] [DE:TRANSGLYCOSYLASE) (GUANINE INSERTION ENZYME)] [SP:O32053] [DB:swissprot] >pir:[LN:B69722] [AC:B69722] [PN:queuine tRNA-ribosyltransferase,] [GN:tgt] [CL:queuine tRNA-ribosyltransferase] [OR:Bacillus subtilis] [EC:2.4.2.29] [DB:pir2] >gp:[GI:e1184020:g2635236] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:tRNA-guanine transglycosylase] [GN:tgt] [FN:queuosine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.2.29] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O32053] [LE:36858] [RE:38003] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_16205035_c1_1036 254 4026 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_16610088_c2_1261 255 4027 645 214 405 9.0e-38 Description sp:[LN:YPAA_BACSU] [AC:P50726] [GN:YPAA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 20.5 KD PROTEIN IN SERA-FER INTERGENIC REGION] [SP:P50726] [DB:swissprot] >pir:[LN:E69932] [AC:E69932] [PN:hypothetical protein ypaA] [GN:ypaA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185574:g2634740] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:ypaA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P50726] [LE:13991] [RE:14563] [DI:complement] >gp:[GI:g1146197] [LN:BACSERA] [AC:L47648] [GN:ypaA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD-+ dependentglycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes complete cds.] [NT:putative] [LE:2114] [RE:2686] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_16828175_c3_1395 256 4028 606 201 1021 4.8e-103 Description gp:[GI:g4325247] [LN:AF121672] [AC:AF121672] [PN:superoxide dismutase SodA] [GN:sodA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus superoxide dismutase SodA (sodA) gene, complete cds.] [NT:manganese-dependent] [LE:246] [RE:845] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_16923383_c2_1252 257 4029 339 112 156 3.1e-11 Description sp:[LN:YQJQ_BACSU] [AC:P54554] [GN:YQJQ] [OR:BACILLUS SUBTILIS] [EC:1.-.-.-] [DE:[EC 1.-.-.-)] [SP:P54554] [DB:swissprot] >pir:[LN:A69965] [AC:A69965] [PN:ketoacyl reductase homology qjQ] [GN:yqjQ] [CL:short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013303:g1303968] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JHG42CtrpC2 PheAl)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:247869] [RE:248648] [DI:direct] >gp:[GI:e1185647:g2634813] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to ketoacyl reductase] [SP:P54554] [LE:74971] [RE:75750] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_17002217_c2_1254 258 4030 465 154 587 4.7e-57 Description sp:[LN:FUR2_BACSU] [AC:P54574] [GN:YQKL] [OR:BACILLUS SUBTILIS] [DE:FERRIC UPTAKE REGULATION PROTEIN HOMOLOG 2] [SP:P54574] [DB:swissprot] >pir:[LN:E69967] [AC:E69967] [PN:transcription regulator Fur family homolog yqkL] [GN:yqkL] [CL:ferric uptake regulator] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013328:g1303993] [LN:BACJH642] [AC:D84432:D82370] [PN:YqkL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:269361] [RE:269810] [DI:direct] >gp:[GI:e1185621:g2634787] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqkL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to transcriptional regulator (Fur family)] [SP:P545742 [LE:53809] [RE:54258] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_187593_c1_1074 259 4031 972 323 177 3.8e-12 Description sp:[LN:YPBB_BACSU] [AC:P50728] [GN:YPBB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 40.7 KD PROTEIN IN FER-RECQ INTERGENIC REGION] [SP:P50728] [DB:swissprot] >pir:[LN:F69932] [AC:F69932] [PN:hypothetical protein ypbB] [GN:ypbB] [OR:Bacillus subtilis] [DB:pir2] >gp:GI:e1183748:g2634721] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypbB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [SP:P50728] [LE:212099] [RE:213157] [DI:complement] >gp:[GI:e1185572:g2634738] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:ypbB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P50728] [LE:12379] [RE:13437] [DI:complement] >gp:[GI:g1146199] [LN:BACSERA] [AC:L47648] [GN:ypbB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependentglycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:putative] [LE:3240] [RE:4298] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_189203_c2_1199 260 4032 762 253 550 3.9e-53 Description sp:[LN:YQEU_BACSU] [AC:P54461] [GN:YQEU] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 28.8 KD PROTEIN IN DNAJ-RPSU INTEREGENIC REGION] [SP:P54461] [DB:swissprot] >pir:[LN:D69952] [AC:D69952] [PN:conserved hypothetical protein yqeU] [GN:yqeU] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013146:g1303811] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqeU] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:95803] [RE:96573] [DI:direct] >gp:[GI:e1183774:g2634990] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqeU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [SP:P54461] [LE:22857] [RE:23627] [DI:complement] >gp:[GI:d1012752:g1890060] [LN:D83717] [AC:D83717] [PN:YqeU] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642 (trpC2 pheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for DnaJ, YqeT, YqeU, YqeV, YqeW, YqeX, YqeY, complete and partial cds.] [NT:Similar to 26.9 kDa protein (YggJ) of E. coli] [LE:1334] [RE:2104] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_19540931_c2_1191 261 4033 2220 739 647 2.0e-63 Description sp:[LN:CME3_BACSU] [AC:P39695] [GN:COMEC:COME3] [OR:BACILLUS SUBTILIS] [DE:COME OPERON PROTEIN 3] [SP:P39695] [DB:swissprot] >pir:[LN:S39865] [AC:S39865:E69602] [PN:late competence protein 3 (comE operon)] [GN:comEC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g289262] [LN:BACCOME] [AC:L15202] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct2] [DE:Bacillus subtilis comE operon encoding ORF1, ORF2, ORF3 and Reverse-ORF genes, complete cds.] [LE:2603] [RE:4933] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_19567588_c3_1496 262 4034 513 170 443 8.5e-42 Description sp:[LN:PTGA_BACST] [AC:P42015] [GN:PTSG] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:2.7.1.69] [DE:COMPONENT), (EII-GLC/EIII-GLC) (FRAGMENT)] [SP:P42015] [DB:swissprot] >gp:[GI:g529001] [LN:BSU12340] [AC:U12340] [PN:PTS glucose-specific permease] [GN:ptsG′] [OR:Bacillus stearothermophilus] [DB:genpept-bct1] [DE:Bacillus stearothermophilus XL-65-6 phosphoenolpyruvate-dependentphosphotransferase system glucose-specific permease (ptsG′) gene, partial cds, HPr (ptsH), enzyme I (ptsI), and PtsT (ptsT) genes, complete cds, and wall associated protein precursor (wapA′) gene, complete cds.] [NT:thermophilic, cytoplasmic protein] [LE:<1] [RE:976] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_19567812_c3_1495 263 4035 465 154 478 1.7e-45 Description sp:[LN:YPPQ_BACSU] [AC:P54155] [GN:YPPQ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 16.6 KD PROTEIN IN ILVA 3′REGION] [SP:P54155] [DB:swissprot] >pir:[LN:F69940] [AC:F69940] [PN:transcription regulator PilB family homolog yppQ] [GN:yppQ] [CL:hypthetical protein YCL033c] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256654] [LN:BACYACA] [AC:L77246] [GN:yppQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis [YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:54.8% identity with Neisseria gonorrhoeae] [LE:33923] [RE:34354] [DI:direct] >gp:[GI:e1183615:g2634588] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:yppQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to transcriptional regulator (PilB family)] [SP:P54155] [LE:90798] [RE:91229] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_1960017_f3_809 264 4036 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_19804838_f2_385 265 4037 717 238 549 5.0e-53 Description sp:[LN:YPDP_BACSU] [AC:P54163] [GN:YPDP] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 25.7 KD PROTEIN IN BCSA-DEGR INTERGENIC REGION] [SP:P54163] [DB:swissprot] >pir:[LN:C69934] [AC:C69934] [PN:conserved hypothetical protein ypdP] [GN:ypdP] [CL:Archaeoglobus fulgidus conserved hypothetical protein AF2110] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256625] [LN:BACYACA] [AC:L77246] [GN:ypdP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:putative] [LE:11031] [RE:11720] [DI:complement] >gp:[GI:e1183645:g2634618] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypdP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to hypothetical proteins] [SP:P54163] [LE:113432] [RE:114121] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20006377_c3_1392 266 4038 732 243 432 1.2e-40 Description sp:[LN:YQFN_BACSU] [AC:P54471] [GN:YQFN] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 23.7 KD PROTEIN IN CCCA-SODA INTERGENIC REGION] [SP:P54471] [DB:swissprot] >pir:[LN:H69953] [AC:H69953] [PN:conserved hypothetical protein yqfN] [GN:yqfN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013170:g1303835] [LN:BACJH642] [AC:D84432:D82370] [PN:YqfN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:120338] [RE:120988] [DI:direct] >gp:[GI:e1185785:g2634951] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqfN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to hypothetical proteins] [SP:P54471] [LE:202632] [RE:203282] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20035967_c1_1082 267 4039 1059 352 922 1.5e-92 Description pir:[LN:H69636] [AC:H69636] [PN:glycerol-3-phosphate dehydrogenase (NAD+), gpsA] [GN:gpsA] [CL:glycerol-3-phosphate dehydrogenase] [OR:Bacillus subtilis] [EC:1.1.1.8] [DB:pir2] >gp:[GI:e1183728:g2634701] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:NAD(P)H-dependent glycerol-3-phosphate] [GN:gpsA] [FN:synthesis of the sn-glycerol 3-phosphate] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.94] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [SP:P46919] [LE:192848] [RE:193885] [DI:complement] >gp:[GI:g1146220] [LN:BACSERA] [AC:L47648] [PN:NAD+dependent glycerol-3-phosphate] [GN:glyC] [OR:Bacillus subtilis] [DB:genpept-bct2] [EC:1.1.1.94] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+dependentglycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [LE:22512] [RE:23549] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20054642_f2_341 268 4040 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2038325_f2_381 269 4041 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20485712_c3_1498 270 4042 573 190 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20503437_c3_1456 271 4043 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20507937_c2_1280 272 4044 1317 438 1823 4.9e-188 Description sp:[LN:SYN_BACSU] [AC:P39772] [GN:ASNS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.22] [DE:(ASNRS)] [SP:P39772] [DB:swissprot] >pir:[LN:B69591] [AC:B69591:I40523] [PN:asparagine- -tRNA ligase, asnS:asparaginyl-tRNA synthetase asnS] [GN:asnS] [CL:lysine- -tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.22] [DB:pir2] >gp:[GI:g1146247] [LN:BACYPIA] [AC:L47709] [PN:asparaginyl-tRNA synthetase] [GN:asnS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.22] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes, ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:41.1% of identity to the Escherichia coli] [LE:20449] [RE:21741] [DI:direct] >gp:[GI:e1183681:g2634654] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:asparaginyl-tRNA synthetase] [GN:asnS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.22] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [SP:P39772] [LE:149926] [RE:151218] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20517135_c3_1457 273 4045 315 104 361 4.1e-33 Description sp:[LN:DBH_BACST] [AC:P02346:P08822] [GN:HBS:HBSU] [OR:BACILLUS STEAROTHERMOPHILUS:BACILLUS CALDOLYTICUS:BACILLUS CALDOTENAX] [DE:DNA-BINDING PROTEIN II (HB) (HU)] [SP:P02346:P08822] [DB:swissprot] >pir:[LN:DNBS2F] [AC:JC1205:A02690:JC2509] [PN:DNA-binding protein HU:DNA-binding protein II] [GN:hup] [CL:bacterial DNA-binding protein] [OR:Bacillus stearothermophilus] [DB:pir1] >pir:[LN:JC1207] [AC:JC1207] [PN:DNA-binding protein HU] [GN:hup] [CL:bacterial DNA-binding protein] [OR:Bacillus caldolyticus] [DB:pir2] >pir:[LN:JC1206] [AC:JC1206] [PN:DNA-binding protein HU] [GN:hup] [CL:bacterial DNA-binding protein] [OR:Bacillus caldotenax] [DB:pir2] >gp:[GI:d1007851:g1065992] [LN:BACDBPHU] [AC:D38080] [PN:DNA binding protein HU] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain:1503) DNA] [DB:genpept-bct1] [DE:Bacillus stearothermophilus gene for DNA binding protein HU, complete cds.] [LE:13] [RE:285] [DI:direct] >gp:[GI:g143065] [LN:BACHUB1] [AC:M73500] [PN:hubst] [GN:hubst] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus DNA] [DB:genpept -bct1] [DE:B. stearothermophilus hubst gene, complete cds.] [LE:1] [RE:>270] [DI:direct] >gp:[GI:g143067] [LN:BACHUB2] [AC:M73501] [PN:hubcalx] [GN:hubcalx] [OR:Bacillus caldotenax] [SR:Bacillus caldotenax DNA] [DB:genpept-bct1] [DE:B. caldotenax hubcalx gene, 5′ end.] [LE:1] [RE:>270] [DI:direct] >gp:[GI:g143069] [LN:BACHUB3] [AC:M73502] [PN:hubcald] [GN:hubcald] [OR:Bacillus caldolyticus] [SR:Bacillus caldolyticus DNA] [DB:genpept-bct1] [DE:B. caldolyticus hubcald gene, 5′ end.] [LE:1] [RE:>270] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20587536_f1_4 274 4046 630 209 241 2.2e-20 Description sp:[LN:XPAC_BACSU] [AC:P37467] [GN:XPAC] [OR:BACILLUS SUBTILIS] [DE:XPAC PROTEIN] [SP:P37467] [DB:swissprot] >pir:[LN:527526] [AC:S27526:S66055:C69734] [PN:5-bromo-4-chloroindolyl phosphate hydrolysis protein xpaC:xpaC protein] [GN:xpaC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005803:g467415] [LN:BAC180K] [AC:D26185] [PN:hydrolysis of 5-bromo-4-chloroindolyl phosphate] [GN:xpaC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:99445] [RE:100059] [DI:direct] >gp:[GI:g143830] [LN:BACXPAC] [AC:M96156] [GN:xpaC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis ORF1 and xpaC gene, complete cds's; ssrRNA gene,3′ end; ORF3C 5′ end.] [LE:532] [RE:1146] [DI:direct] >gp:[GI:e1181958:g2632292] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:xpaC] [FN:hydrolysis of 5-bromo 4-chloroindolyl phosphate] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P37467] [LE:35843] [RE:36457] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20594688_c2_1331 275 4047 1725 574 126 6.2e-08 Description sp:[LN:LPLA_BACSU] [AC:P37966] [GN:LPLA] [OR:BACILLUS SUBTILIS] [DE:LIPOPROTEIN LPLA PRECURSOR] [SP:P37966] [DB:swissprot] >pir:LN:I39876] [AC:I39876:H69652] [PN:lipoprotein lplA:lysis protein lplA] [GN:lplA] [CL:Bacillus subtilis lipoprotein lplA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182689:g2633023] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:lipoprotein] [IGN:lplA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [SP:P37966] [LE:178337] [RE:179845] [DI:direct] >gp:[GI:g431272] [LN:BACLPLA] [AC:L03376] [PN:lysis protein] [GN:lplA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain Marburg 168) DNA] [DB:genpept-bct2] [DE:Bacillus subtilis lysis protein (lplA) gene, complete cds.] [LE:482] [RE:1990] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20734677_c1_1135 276 4048 774 257 297 2.5e-26 Description gp:[GI:g4981613] [LN:AE001767] [AC:AE001767:AE000512] [PN:transcriptional regulator, DeoR family] [GN:TM1069] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 79 of 136 of the complete genome.] [NT:similar to GB:AL009126 percent identity:55.02;] [LE:1578] [RE:2336] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20791068_c3_1370 277 4049 273 90 71 0.041 Description gp:[GI:g294060] [LN:PAPMPL146A] [AC:L06467] [PN:major latex protein] [GN:MLP14G] [OR:Papaver somniferum] [SR:Papaver somniferum (strain UNL186) (library:EMBL) DNA] [DB:genpept-plnl] [DE:Papaver somniferum major latex protein (MLP146) gene, complete cds.] [LE:963:1290] [RE:1167:1564] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_20876263_f1_159 278 4050 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2148387_c1_1089 279 4051 1278 425 1794 5.8e-185 Description sp:[LN:AROC_STAAU] [AC:Q59803] [GN:AROC] [OR:STAPHYLOCOCCUS AUREUS] [EC:4.6.1.4] [DE:PHOSPHOLYASE)] [SP:Q59803] [DB:swissprot] >gp:[GI:g987498] [LN:SAU31979] [AC:U31979] [PN:chorismate synthase] [GN:aroC] [QR:Staphylococcus aureus] [DB:genpept-bct1] [EC:4.6.1.4] [DE:Staphylococcus aureus chorismate synthase (aroC) and nucleosidediphosphate kinase (ndk) genes, complete cds, dehydroauinatesynthase (aroB) and geranylgeranyl pyrophosphate synthetase homolog(gerCC) genes, partial cds.] [NT:5-enolpyruvyishikimate 3-phosphate phospho-lyase] [LE:1142] [RE:2308] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21501550_c1_1127 280 4052 1116 371 999 1.0e-100 Description gp:[GI:g3688811] [LN:AF084104] [AC:AF084104] [PN:maltose transportor ATP-binding protein] [GN:malK] [OR:Bacillus firmus] [DB:genpept-bct2] [DE:Bacillus firmus AcsA (acsA) gene, partial cds; SspA CsspA), hypothetical protein, maltose transportor ATP-binding protein(malK), leucine-rich protein transcriptional regulator (lrpR), hypothetical proteins, ABC transporter ATP-binding protein (natC) ,NatA (natA), NatB (natB), and hypothetical protein genes, complete cds; and SpoIIIJ (spoIIIJ) gene, partial cds.] [NT:MalK; Orf4; similar to MsmX from Bacillus subtilis,] [LE:2390] [RE:3490] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21526562_c2_1206 281 4053 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21531627_c3_1483 282 4054 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21537962_c1_1093 283 4055 612 203 357 1.1e-32 Description sp:[LN:YPJA_BACSU] [AC:P543921] [GN:YPJA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 21.3 KD PROTEIN IN QCRC-DAPB INTERGENIC REGION] [SP:P54392] [DB:swissprot] >pir:[LN:A69937] [AC:A69937] [PN:hypothetical protein ypjA] [GN:ypjA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146230] [LN:BACYPIA] [AC:L47709] [GN:ypjA] [FN:hypothetical] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes,ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:putative] [LE:5002] [RE:5559] [DI:direct] >gp:[GI:e1183698:g2634671] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypjA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [SP:P54392] [LE:166108] [RE:166665] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21568762_c1_1013 284 4056 1005 334 992 5.6e-100 Description gp:[GI:e1356351:g3947511] [LN:BMAJ4B29] [AC:AJ224829] [GN:ORF4] [OR:Bacillus megaterium] [DB:genpept-bct1] [DE:Bacillus megaterium DSM319 spoIV operon, 5′ flanking region, 3′ flanking region.] [LE:3056] [RE:4030] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21600325_f1_228 285 4057 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21640636_f1_136 286 4058 276 91 366 1.2e-33 Description pir:[LN:D69621] [AC:D69621] [PN:ferredoxin fer] [GN:fer] [CL:ferredoxin 2[4Fe-4S]:ferredoxin 2[4Fe-4S] homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183749:g2634722] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:ferredoxin] [GN:fer] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:alternate gene name:ypbA] [SP:P50727] [LE:213423] [RE:213671] [DI:direct] >gp:[GI:e1185573:g2634739] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:ferredoxin] [GN:fer] [OR:Bacillus subtilis] [DB:genpept-bct2.] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:alternate gene name:ypbA] [SP:P50727] [LE:13703] [RE:13951] [DI:direct] >gp:[GI:g1146198] [LN:BACSERA] [AC:L47648] [PN:ferredoxin] [GN:fer] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependentglycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:ypbA; similar to B. stearothermophilus ferredoxin;) [LE:2726] [RE:2974] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21667676_c1_975 287 4059 888 295 590 2.2e-57 Description pir:[LN:C69981] [AC:C69981] [PN:conserved hypothetical protein yrvM] [GN:yrvM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184002:g2635218] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yrvM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to hypothetical proteins)] [LE:17779] [RE:18264] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21674067_f1_8 288 4060 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21678187_c3_1486 289 4061 240 79 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21730443_c1_1055 290 4062 1332 443 904 1.2e-90 Description sp:[LN:ODB2_BACSU] [AC:P37942] [GN:BFMBB:BFMB2:BFMB] [OR:BACILLUS SUBTILIS] [EC:2.3.1.-] [DE:CHAIN TRANSACYLASE)] [SP:P37942] [DB:swissprot] pir:[LN:S32488] [AC:S32488:E69593] [PN:dihydrolipoamide S-acyltransferase,, alpha-oxo acid dehydrogenase complex (bfmBB):branched-chain alpha-oxo acid dehydrogenase complex E2 component:dihydrolipoyl acyltransferase] [GN:bfmBB] [CL:dihydrolipoamide acetyltransferase:lipoyl/biotin-binding homology] [OR:Bacillus subtilis] [EC:2.3.1.-] [DB:pir2] >gp:[GI:g142613] [LN:BACBRANCH] [AC:M97391:M96937] [PN:branched chain alpha-keto acid dehydrogenase E2] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis branched chain alpha-keto acid dehydrogenaseE1-alpha, branched chain alpha-keto acid dehydrogenase E1-beta, and branched chain alpha-keto acid dehydrogenase E2, complete cds.] [LE:2228] [RE:3502] [DI:direct] >gp:[GI:d1013279:g1303944] [LN:BACJH642] [AC:D84432:D823701] [PN:BfmBB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:221574] [RE:222848] [DI:direct] >gp:[GI:e1185671:g2634837] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:branched-chain alpha-keto acid dehydrogenase E2] [GN:bfmBB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.1.-] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:alternate gene name:bfmB2] [SP:P37942] [LE:100771] [RE:102045] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21756562_c2_1289 291 4063 696 231 162 5.1e-12 Description pir:[LN:G69828] [AC:G69828] [PN:calcium-binding protein homolog yheG] [GN:yheG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182974:g2633308] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yheG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to calcium-binding protein] [LE:49122] [RE:49742] [DI:complement] >gp:[GI:e325187:g2226164] [LN:BSY14080] [AC:Y14080] [PN:hypothetical protein] [GN:yheG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees:sspB upstream of glyB.] [NT:similarity to bovine flavin reductase [PID =] [LE:11988] [RE:12608] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21759427_c3_1407 292 4064 1350 449 1396 8.7e-143 Description sp:[LN:GCS1_BACSU] [AC:P54376] [GN:YQHJ] [OR:BACILLUS SUBTILIS] [EC:1.4.4.2] [DE:PROTEIN)] [SP:P54376] [DB:swissprot] >pir:[LN:A69959] [AC:A69959] [PN:glycine dehydrogenase homolog yqhJ] [GN:yqhJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013226:g1303891] [LN:BACJH642] [AC:D84432:D82370] [PN:YqhJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:171390] [RE:172736] [DI:direct] >gp:[GI:e1185724:g2634890] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqhJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to glycine dehydrogenase] [SP:P54376] [LE:150885] [RE:152231] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21914067_c3_1512 293 4065 1416 471 532 3.1e-51 Description gp:[GI:g2182835] [LN:LLU81166] [AC:U81166] [PN:histidine kinase LlkinA] [GN:llkinA] [OR:Lactococcus lactis subsp. cremoris] [DB:genpept-bct2] [DE:Lactococcus lactis subsp. cremoris MG1363 histidine kinase (llkinA)gene, complete cds.] [LE:1] [RE:1473] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2195307_c3_1402 294 4066 1095 364 348 9.9e-32 Description sp:[LN:CMG2_BACSU] [AC:P25954] [GN:COMGB:COMG2] [OR:BACILLUS SUBTILIS] [DE:COMG OPERON PROTEIN 2] [SP:P25954] [DB:swissprot] >pir:[LN:C30338] [AC:C30338:C69603] [PN:DNA transport machinery protein comGB:comG operon protein 2] [GN:comGB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142707] [LN:BACCOMGA] [AC:M29691:M22854] [GN:comG2] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168) (clone:pED4) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis (clone pED4) comG-(1, 2, 3, 4, 5, 6, and 7) proteins incomG operon, complete cds.] [LE:2420] [RE:3391] [DI:direct] >gp:[GI:d1013213:g1303878] [LN:BACJHG42] [AC:D84432:D82370] [PN:ComGB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:160650] [RE:161621] [DI:direct] >gp:[GI:e1185740:g2634906] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:probably part of the DNA transport machinery] [GN:comGB] [FN:competence] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P25954] [LE:162000] [RE:162971] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_21962762_c1_1139 295 4067 732 243 615 5.0e-60 Description gp:[GI:g143267] [LN:BACODHAB] [AC:M27141] [OR:Bacillus subtilis] [SR:B. subtilis (strain 3G18) DNA] [DB:genpept-bct1] [DE:B. subtilis 2-oxoglutarate dehydrogenase (odhA) gene 3′ end, and dihydrolipoamide transsuccinylase (odhB) gene, complete cds.] [NT:2-oxoglutarate dehydrogenase (odhA; EC 1.2.4.2)] [LE:<1] [RE:883] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_22031307_f3_906 296 4068 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2227312_c1_974 297 4069 1782 593 2019 8.4e-209 Description sp:[LN:SYD_BACSU] [AC:O32038] [GN:ASPS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.12] [DE:[ASPRS)] [SP:O32038] [DB:swissprot] >pir:[LN:D69591] [AC:D69591] [PN:aspartate- -tRNA ligase, aspS:aspartyl-tRNA synthetase] [GN:aspS] [CL:lysine- -tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.12] [DB:pir2] >gp:[GI:e1184003:g2635219] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:aspartyl-tRNA synthetase] [GN:aspS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.12] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O32038] [LE:18878] [RE:20656] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_22459462_c2_1275 298 4070 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_22661088_c3_1363 299 4071 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23392_f2_366 300 4072 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23445266_c1_1120 301 4073 567 188 579 3.3e-56 Description sp:[LN:PMSR_BACSU] [AC:P54154] [GN:YPPP] [OR:BACILLUS SUBTILIS] [DE:REDUCTASE)] [SP:P54154] [DB:swissprot] >pir:[LN:E69940] [AC:E69940 [PN:peptide methionine sulfoxide reductase homolog yppP] [GN:yppP] [CL:peptide methionine sulfoxide reductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256653] [LN:BACYACA] [AC:L77246] [PN:DNA-binding protein] [GN:yppP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:42.4% identity with the Lycopersicon esculentum] [LE:33389] [RE:33922] [DI:direct] >gp:[GI:e1183616:g2634589] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:yppP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to peptide methionine sulfoxide reductase] [SP:P54154] [LE:91230] [RE:91763] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23445762_c3_1397 302 4074 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23468938_f1_258 303 4075 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23470327_c2_1225 304 4076 1461 486 446 4.1e-42 Description pir:[LN:552351] [AC:S52351] [PN:hypothetical protein 1] [OR:Staphylococcus xylosus] [DB:pir2] >gp:[GI:g666115] [LN:SXGKG2] [AC:X84332] [GN:ugl] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S. xylosus glucose kinase gene.] [NT:orf1 upstream of glucose kinase] [LE:<1] [RE:406] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23470452_c2_1183 305 4077 441 146 214 1.6e-17 Description pir:[LN:F71860] [AC:F71860] [PN:biotin carboxyl carrier protein] [GN:accB] [CL:biotin carboxyl carrier protein:lipoyl/biotin-binding homology] [OR:Helicobacter pylori] [SR:strain J99, , strain J99] [SR:strain J99,] [DB:pir2] >gp:[GI:g4155592] [LN:AE001529] [AC:AE001529:AE001439] [PN:BIOTIN CARBOXYL CARRIER PROTEIN] [GN:accB] [OR:Helicobacter pylori J99] [DB:genpept-bct2] [DE:Helicobacter pylori, strain J99 section 90 of 132 of the complete genome.] [NT:similar to H. pylori 26695 gene HP0371] [LE:5447] [RE:5932] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23476676_c2_1204 306 4078 369 122 227 6.6e-19 Description gp:[GI:g902055] [LN:BSU29177] [AC:U29177] [PN:diacylglycerol kinase] [GN:dgk] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis PhoH (phoH) gene, partial cds, diacylglycerolkinase (dgk) gene, complete cds, and cytidine deaminase (cdd) gene, partial cds.] [LE:2793] [RE:3197] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23595137_c2_1185 307 4079 558 185 522 3.6e-50 Description sp:[LN:YQEG_BACSU] [AC:P54452] [GN:YQEG] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 20.1 KD PROTEIN IN NUCB-AROD INTERGENIC REGION] [SP:P54452] [DB:swissprot] >pir:[LN:C69951] [AC:C69951] [PN:conserved hypothetical protein yqeG] [GN:yqeG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013122:g1303787] [LN:BACJH642] [AC:D84432:D82370] [PN:YqeG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:72502] [RE:73020] [DI:direct] >gp:[GI:e1183798:g2635014] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqeG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [SP:P54452] [LE:46410] [RE:46928] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23597252_f2_557 308 4080 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23620205_f2_640 309 4081 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23625000_c2_1246 310 4082 1683 560 2374 2.0e-246 Description pir:[LN:S44188] [AC:S44188] [PN:alpha-glucosidase,] [CL:alpha-glucosidase:alpha-amylase core homology] [OR:Staphylococcus xylosus] [EC:3.2.1.20] [DB:pir2] >gp:[GI:g474177] [LN:SXMALRAG] [AC:X78853] [PN:alpha-D-1,4-glucosidase] [GN:malA] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [EC:3.2.1.20] [DE:S. xylosus malR gene and malA gene.] [LE:1454] [RE:3103] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23626383_f3_761 311 4083 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23626425_c1_1042 312 4084 1056 351 763 1.0e-75 Description pir:[LN:S72490] [AC:S72490:I39765] [PN:N-acetyl-gamma-glutamyl-phosphate reductase,] [GN:argC] [CL:N-acetyl-gamma-glutamyl-phosphate reductase] [OR:Bacillus stearothermophilus] [EC:1.2.1.38] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23642942_c1_1012 313 4085 696 231 142 3.6e-07 Description pir:[LN:B71609] [AC:B71609] [PN:hypothetical protein PFB0680w] [GN:PFB0680w] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845248] [LN:AE001410] [AC:AE001410:AE001362] [PN:hypothetical protein] [GN:PFB0680w] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 47 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:10507:10754:12646] [RE:10567:12528:12807] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23703452_c1_1037 314 4086 1509 502 1808 1.9e-186 Description sp:[LN:GCS2_BACSU] [AC:P54377] [GN:YQHK] [OR:BACILLUS SUBTILIS] [EC:1.4.4.2] [DE:PROTEIN)] [SP:P54377] [DB:swissprot] >pir:[LN:B69959] [AC:B69959] [PN:glycine dehydrogenase homolog yqhK] [GN:yqhK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013227:g1303892] [LN:BACJH642] [AC:D84432:D82370] [PN:YqhK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:172729] [RE:174195] [DI:direct] >gp:[GI:e1185723:g2634889] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqhK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to glycine dehydrogenase] [SP:P54377] [LE:149426] [RE:150892] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23707890_c2_1322 315 4087 240 79 123 6.9e-08 Description pir:[LN:A69931] [AC:A69931] [PN:hypothetical protein yozE] [GN:yozE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185439:g2634360] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yozE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [LE:137942] [RE:138166] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2381885_c1_988 316 4088 1272 423 1066 8.1e-108 Description pir:[LN:E69765] [AC:E69765:I39896:I39895] [PN:branched chain amino acids transporter homolog ycsG] [GN:ycsG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182373:g2632707] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycsG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:alternate gene name: ycsH; similar to branched] [LE:54666] [RE:55826] [DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23836052_f2_497 317 4089 849 282 392 2.1e−36 Description sp:[LN:PROI_BACSU] [AC:P54552] [GN:YQJO] [OR:BACILLUS SUBTILIS] [DE:PYRROLINE-5-CARBOXYLATE REDUCTASE HOMOLOG 2] [SP:P54552] [DB:swissprot] >pir:[LN:G69964] [AC:G69964] [PN:pyrroline-5-carboxylate reductase homolog yqjO] [GN:yqjO] [CL:pyrroline-5-carboxylate reductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013301:g1303966] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjO] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:245663] [RE:246499] [DI:complement] >gp:[GI:e1185649:g2634815] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to pyrroline-5-carboxylate reductase] [SP:P54552] [LE:77120] [RE:77956] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23850302_c3_1369 318 4090 2694 897 2695 1.9e−280 Description sp:[LN:SYA_BACSU] [AC:O34526] [GN:ALAS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.7] [DE:ALANYL-TRNA SYNTHETASE, (ALANINE--TRNA LIGASE) (ALARS)] [SP:O34526] [DB:swissprot] >pir:[LN:A69584] [AC:A69584] [PN:alanine--tRNA ligase, alaS:alanyl-tRNA synthetase] [GN:alaS] [CL:alanine--tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.7] [DB:pir2] >gp:[GI:e1183970:g2635186] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:alanyl-tRNA synthetase] [GN:alaS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.7] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [SP:O34526] [LE:197994] [RE:200630] [DI:complement] >gp:[GI:e1183988:g2635204] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:alanyl-tRNA synthetase] [GN:alaS) [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.7] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [SP:034526] [LE:2314] [RE:4950] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23884692_c3_1415 319 4091 366 121 217 7.5e−18 Description sp:[LN:YQHY_BACSU] [AC:P54519] [GN:YQHY] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 14.7 KD PROTEIN IN ACCC-FOLD INTERGENIC REGION] [SP:P54519] [DB:swissprot] >pir:[LN:E69960] [AC:E69960] [PN:conserved hypothetical protein yqhY] [GN:yqhY] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013249:g1303914] [LN:BACJH642] [AC:D84432:D82370] [PN:YqhY] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:189273] [RE:189680] [DI:direct] >gp:[GI:e1185701:g2634867] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqhY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to hypothetical proteins from B. subtilis] [SP:P54519] [LE:133941] [RE:134348] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23912502_f2_605 320 4092 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_23964011_f2_352 321 4093 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24042212_c3_1403 322 4094 498 165 72 0.034 Description sp:[LN:CMG3_BACSU] [AC:P25955] [GN:COMGC:COMG3] [OR:BACILLUS SUBTILIS] [DE:COMG OPERON PROTEIN 3 PRECURSOR] [SP:P25955] [DB:swissprot] >pir:[LN:D30338] [AC:D30338:A35133:D69603] [PN:exogenous DNA-binding protein comGC:comG operon protein 3] [GN:comGC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142708] [LN:BACCOMGA] [AC:M29691:M22854] [GN:comG3] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168) (clone:pED4) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis (clone pED4) comG-(1, 2, 3, 4, 5, 6, and 7) proteins incomG operon, complete cds.] [LE:3405] [RE:3701] [DI:direct] >gp:[GI:d1013214:g1303879] [LN:BACJH642] [AC:D84432:D82370] [PN:ComGC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:161635] [RE:161931] [DI:direct] >gp:[GI:e1185739:g2634905] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:comGC] [FN:exogenous DNA-binding (competence)] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P25955] [LE:161690] [RE:161986] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24071068_f1_186 323 4095 399 132 308 1.7e−27 Description sp:[LN:YQHL_BACSU] [AC:P54510] [GN:YQHL] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 14.6 KD PROTEIN IN GCVT-SPOIIIAA INTERGENIC REGION] [SP:P54510] [DB:swissprot] >pir:[LN:C69959] [AC:C69959] [PN:glpE protein homolog yqhL] [GN:yqhL] [CL:glpE protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013228:g1303893] [LN:BACJH642] [AC:D84432:D82370] [PN:YqhL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:174230] [RE:174610] [DI:complement] >gp:[GI:e1185722:g2634888] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqhL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to hypothetical proteins] [SP:P54510] [LE:149011] [RE:149391] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24094090_c1_986 324 4096 957 318 927 4.4e−93 Description pir:[LN:G69979] [AC:G69979] [PN:proteinase homolog yrrN] [GN:yrrN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183965:g2635181] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrrN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to protease] [LE:193967] [RE:194896] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24100715_c3_1422 325 4097 1035 344 888 5.9e−89 Description sp:[LN:ODBA_BACSU] [AC:P37940] [GN:BFMBAA:BFMB1A] [OR:BACILLUS SUBTILIS] [EC:1.2.4.4] [DE:(BCKDH E1-ALPHA)] [SP:P37940] [DB:swissprot] >pir:[LN:C69593] [AC:C69593:S32486] [PN:3-methyl-2-oxobutanoate dehydrogenase (lipoamide), E1 alpha chain bfmBAA:branched-chain alpha-oxo acid dehydrogenase E1 alpha chain] [GN:bfmBAA] [CL:pyruvate dehydrogenase (lipoamide) alpha chain:thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [EC:1.2.4.4] [DB:pir2] >gp:[GI:g142611] [LN:BACBRANCH] [AC:M97391:M96937] [PN:branched chain alpha-keto acid dehydrogenase] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis branched chain alpha-keto acid dehydrogenase E1-alpha, branched chain alpha-keto acid dehydrogenase E1-beta, and branched chain alpha-keto acid dehydrogenase E2, complete cds.] [LE:216] [RE:1208] [DI:direct] >gp:[GI:d1013277:g1303942] [LN:BACJH642] [AC:D84432:D82370] [PN:BfmBAA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:219562] [RE:220554] [DI:direct] >gp:[GI:e1185673:g2634839] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:branched-chain alpha-keto acid dehydrogenase E1] [GN:bfmBAA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.2.4.4] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:alternate gene name:bfmB1a] [SP:P37940] [LE:103065] [RE:104057] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24104702_c1_1109 326 4098 30612 10, 20 618 1.1e−54 Description gp:[GI:g1041785] [LN:PYU36927] [AC:U36927] [PN:rhoptry protein] [FN:erythrocyte invasion and possible binding] [OR:Plasmodium yoelii] [DB:genpept-inv1] [DE:Plasmodium yoelii rhoptry protein gene, partial cds.] [LE:<1] [RE:7206] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24117777_f3_858 327 4099 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24225000_c1_1152 328 4100 651 216 365 1.6e−33 Description gp:[GI:g2194195] [LN:SGU61158] [AC:U61158] [PN:GdmF] [GN:gdmF] [OR:Staphylococcus gallinarum] [DB:genpept-bct1] [DE:Staphylococcus gallinarum Tue3928 GdmF (gdmF), putative membrane protein (gdmH), ABC transporter (gdmT), and antibiotic gallidermin precursor (gdmA) genes, complete cds, putative membrane protein(gdmE) and modifying enzyme (gdmB) genes, partial cds.] [NT:proposed ABC transporter subunit (ATP-binding] [LE:179] [RE:874] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24226412_c3_1436 329 4101 570 189 437 3.7e−41 Description sp:[LN:YQKG_BACSU] [AC:P54570] [GN:YQKG] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 21.0 KD PROTEIN IN GLNQ-ANSR INTERGENIC REGION] [SP:P54570] [DB:swissprot] >pir:[LN:A69967] [AC:A69967] [PN:conserved hypothetical protein yqkG] [GN:yqkG] [CL:yffH protein:mutT domain homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013319:g1303984] [LN:BACJH642] [AC:D84432:D82370] [PN:YqkG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:260584] [RE:261141] [DI:direct] >gp:[GI:e1185630:g2634796] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqkG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to hypothetical proteins] [SP:P54570] [LE:62478] [RE:63035] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24226635_f2_499 330 4102 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24228452_f3_942 331 4103 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24229515_c3_1423 332 4104 1170 389 980 1.1e−98 Description sp:[LN:YQJE_BACSU] [AC:P54542] [GN:YQJE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 39.7 KD PROTEIN IN GLNQ-ANSR INTERGENIC REGION] [SP:P54542] [DB:swissprot] >pir:[LN:E69963] [AC:E69963] [PN:tripeptidase homolog yqjE] [GN:yqjE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013291:g1303956] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:232856] [RE:233971] [DI:direct] >gp:[GI:e1185659:g2634825] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to tripeptidase] [SP:P54542] [LE:89648] [RE:90763] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24229805_c3_1376 333 4105 1386 461 1133 6.4e−115 Description pir:[LN:A69581] [AC:A69581] [PN:acetyl-CoA carboxylase (biotin carboxylase subunit) accC] [GN:accC] [CL:biotin carboxylase:biotin carboxylase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013248:g1303913] [LN:BACJH642] [AC:D84432:D82370] [PN:YqhX] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:187900] [RE:189252] [DI:direct] >gp:[GI:e1185702:g2634868] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:acetyl-CoA carboxylase subunit (biotin] [GN:accC] [FN:long-chain fatty acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.4.1.2] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:alternate gene name:yqhX] [SP:P49787] [LE:134369] [RE:135721] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24257658_f1_309 334 4106 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24260061_c3_1353 335 4107 348 115 214 1.6e−17 Description sp:[LN:YSXB_BACSU] [AC:P26942:Q45629] [GN:YSXB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 12.3 KD PROTEIN IN RPLU-RPMA INTERGENIC REGION (ORF X)] [SP:P26942:Q45629] [DB:swissprot] >pir:[LN:S18440] [AC:S18440:D21895:B69987] [PN:conserved hypothetical protein ysxB] [GN:ysxB ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g40174] [LN:BSSPOIVFO] [AC:X59528:S61796] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis spoIVFA, spoIVFB, L20, orfX and L24 genes.] [NT:ORF X] [SP:P26942] [LE:2270] [RE:2608] [DI:direct] >gp:[GI:e1184044:g2635260] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysxB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [SP:P26942] [LE:59308] [RE:59646] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24261692_c3_1518 336 4108 1902 633 995 2.7e−100 Description pir:[LN:D69907] [AC:D69907] [PN:hypothetical protein yojO] [GN:yojO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185410:g2634331] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yojO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [LE:110914] [RE:112899] [DI:complement] >gp:[GI:g3169331] [LN:AF026147] [AC:AF026147] [PN:YojO] [GN:yojO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis YojA (yojA), YojB (yojB), YojC (yojC), YojD (yojD), YojE (yojE), YojF (yojF), YojG (yojG), YojH (yojH), YojI (yojI), YojJ (yojJ), YojK (yojK), YojL (yojL), YojM (yojM), YojN (yojN), and YojO (yojO) genes, complete cds; and OdhA (odhA) gene, partial cds.] [LE:12366] [RE:14351] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24266502_f3_675 337 4109 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24274192_f2_386 338 4110 411 136 233 1.5e−19 Description sp:[LN:EBSB_ENTFA] [AC:P36921] [OR:ENTEROCOCCUS FAECALIS] [SR:,STREPTOCOCCUS FAECALIS] [DE:CELL WALL ENZYME EBSB] [SP:P36921] [DB:Swissprot] >pir:[LN:B49939] [AC:B49939] [PN:ebsB protein] [CL:Enterococcus faecalis ebsB protein] [OR:Enterococcus faecalis] [DB:pir2] >gp:[GI:g388108] [LN:ENEEBSA] [AC:L23802] [PN:cell wall enzyme] [GN:ebsB] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis (strain OG1SSp) DNA] [DB:genpept-bct2] [DE:Enterococcus faecalis pore forming, cell wall enzyme, regulatory, and dehydroquinase homologue proteins (ebsA, ebsB, ebsC, and ebsD)genes, complete cds with repeat region.] [NT:putative] [LE:734] [RE:1141] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24275927_f2_622 339 4111 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24306263_c1_1034 340 4112 297 98 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24410300_c3_1439 341 4113 759 252 686 1.5e−67 Description sp:[LN:RLUB_BACSU] [AC:P35159] [GN:RLUB] [OR:BACILLUS SUBTILIS] [EC:4.2.1.70] [DE:(PSEUDOURIDYLATE SYNTHASE) (URACIL HYDROLYASE)] [SP:P35159] [DB:swissprot] >pir:[LN:S45555] [AC:S45555:A69943] [PN:conserved hypothetical protein ypuL] [GN:ypuL] [CL:conserved hypothetical protein HI1243] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g410137] [LN:BACDIA] [AC:L09228] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis spoVA to serA region.] [NT:ORFX13] [LE:17440] [RE:18129] [DI:direct] >gp:[GI:e1185585:g2634751] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:ypuL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to hypothetical proteins] [SP:P35159] [LE:25454] [RE:26143] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24470317_c1_1011 342 4114 1020 339 1246 6.8e−127 Description sp:[LN:YQFA_BACSU] [AC:P54466] [GN:YQFA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 35.6 KD PROTEIN IN RPSU-PHOH INTEREGENIC REGION] [SP:P54466] [DB:swissprot] >pir:[LN:A69953] [AC:A69953] [PN:hypothetical protein yqfA] [GN:yqfA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013152:g1303817] [LN:BACJH642] [AC:D84432:D82370] [PN:YqfA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:101161] [RE:102156] [DI:direct] >gp:[GI:e1183768:g2634984] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqfA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [SP:P54466] [LE:17274] [RE:18269] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24480275_c3_1499 343 4115 990 329 602 1.2e−58 Description pir:[LN:A69653] [AC:A69653] [PN:transmembrane lipoprotein lplB] [GN:lplB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182690:g2633024] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:transmembrane lipoprotein] [GN:lplB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [LE:179900] [RE:180856] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24486330_c1_980 344 4116 693 230 321 7.2e−29 Description pir:[LN:H69978] [AC:H69978] [PN:conserved hypothetical protein yrrB] [GN:yrrB] [CL:tetratricopeptide repeat homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183978:g2635194] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrrB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to hypothetical proteins] LE:208527] [RE:209147] [DI:complement] >gp:[GI:e1183996:g2635212] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yrrB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [LE:12847] [RE:13467] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24489062_f1_1 345 4117 126 41 72 0.017 Description pir:[LN:D70083] [AC:D70083] [PN:hypothetical protein yxzC] [GN:yxzC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184645:g2636466] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxzC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [LE:21405] [RE:21773] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24511676_c1_1140 346 4118 246 81 251 4.3e−21 Description sp:[LN:ODO2_BACSU] [AC:P16263] [GN:ODHB:CITM] [OR:BACILLUS SUBTILIS] [EC:2.3.1.61] [DE:DEHYDROGENASE COMPLEX, (E2)] [SP:P16263] [DB:swissprot] >pir:[LN:B32879] [AC:B32879:F69668] [PN:dihydrolipoamide S-succinyltransferase, odhB:2-oxoglutarate dehydrogenase complex E2 component odhB:dihydrolipoamide transsuccinylase odhB] [GN:odhB] [CL:dihydrolipoamide acetyltransferase:lipoyl/biotin-binding homology] [OR:Bacillus subtilis] [EC:2.3.1.61] [DB:pir2] >gp:[GI:g143268] [LN:BACODHAB] [AC:M27141] [OR:Bacillus subtilis] [SR:B. subtilis (strain 3G18) DNA] [DB:genpept-bct1] [DE:B. subtilis 2-oxoglutarate dehydrogenase (odhA) gene 3′ end, and dihydrolipoamide transsuccinylase (odhB) gene, complete cds.] [NT:dihydrolipoamide transsuccinylase (odhB; EC] [LE:899] [RE:2152] [DI:direct] >gp:[GI:e1185408:g2634329] [LN:BSUB0011] [AC:Z99114:AL009126] [PN:2-oxoglutarate dehydrogenase complex] [GN:odhB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.1.61] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] [NT:alternate gene name:citM] [SP:P16263] [LE:106590] [RE:107843] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24610877_c1_1035 347 4119 519 172 226 8.4e−19 Description sp:[LN:AROK_LACLA] [AC:P43906] [GN:AROK] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:2.7.1.71] [DE:SHIKIMATE KINASE, (SK)] [SP:P43906] [DB:swissprot] >pir:[LN:S52581] [AC:S52581] [PN:shikimate kinase,] [CL:shikimate kinase:shikimate kinase homology] [OR:Lactococcus lactis] [EC:2.7.1.71] [DB:pir2] >gp:[GI:g683584] [LN:LLTYRAPH] [AC:X78413] [PN:shikimate kinase] [GN:aroK] [OR:Lactococcus lactis] [DB:genpept-bct1] [EC:2.7.1.71] [DE:L. lactis tyrA, aroA, aroK and pheA genes.] [SP:P43906] [LE:2605] [RE:3093] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24615915_c3_1522 348 4120 240 79 275 5.4e−24 Description gp:[GI:g2226349] [LN:AF003593] [AC:AF003593] [PN:CspC] [GN:cspC] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus CspC (cspC) gene, complete cds.] [NT:similar to major cold-shock protein] [LE:444] [RE:644] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24617177_c3_1433 349 4121 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24640937_c2_1229 350 4122 498 165 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24647187_c1_1038 351 4123 126 41 98 8.8e−05 Description gp:[GI:g1022725] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF2] [LE:394] [RE:1083] [DI:complement] >gp:[GI:g295162] [LN:STAMECRA] [AC:L14017] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) gene and unknown ORF, complete cds.] [NT:unknown ORF1; putative] [LE:1492] [RE:2181] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24650016_c3_1478 352 4124 417 138 155 2.8e−11 Description sp:[LN:YPSB_BACSU] [AC:P50839] [GN:YPSB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 11.6 KD PROTEIN IN COTD-KDUD INTERGENIC REGION] [SP:P50839] [DB:swissprot] >pir:[LN:E69941] [AC:E69941] [PN:hypothetical protein ypsB] [GN:ypsB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146182] [LN:BACPONAYPP] [AC:L47838] [GN:ypsB] [FN:hypothetical] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (clone YAC15-6B) ponA gene, yppBCDEFG genes, ypqAE genes, yprAB genes, cotD gene, ypsABC genes, rnaP gene, yptAgene, ypuA gene, kduDI genes, kdgRKAT genes, ypwA gene, complete cds's.] [NT:putative] [LE:12192] [RE:12488] [DI:direct] >gp:[GI:e1183664:g2634637] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypsB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [SP:P50839] [LE:135481] [RE:135777] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24650252_f3_731 353 4125 633 210 970 1.2e−97 Description gp:[GI:e1357086:g3955030] [LN:SAU17795] [AC:Y17795] [PN:unknown] [GN:prfA] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus prfA, pbp2 genes.] [LE:731] [RE:1357] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24658562_f3_926 354 4126 1287 428 1475 3.7e−151 Description pir:[LN:D69981] [AC:D69981] [PN:conserved hypothetical protein yrvN] [GN:yrvN] [CL:Haemophilus influenzae conserved hypothetical protein HI1590] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183983:g2635199] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrvN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [LE:212152] [RE:213417] [DI:direct] >gp:[GI:e1184001:g2635217] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yrvN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [LE:16472] [RE:17737] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24797827_c3_1514 355 4127 1857 618 1242 1.8e−126 Description sp:[LN:ODO1_BACSU] [AC:P23129] [GN:ODHA:CITK] [OR:BACILLUS SUBTILIS] [EC:1.2.4.2] [DE:KETOGLUTARATE DEHYDROGENASE)] [SP:P23129] [DB:swissprot] >pir:[LN:A32879] [AC:S25295:A32879:E69668:S14544] [PN:oxoglutarate dehydrogenase (lipoamide),] [GN:odhA] [CL:oxoglutarate dehydrogenase (lipoamide):thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [EC:1.2.4.2] [DB:pir2] >gp:[GI:g40003] [LN:BSODHA] [AC:X54805:S43328] [PN:oxoglutarate dehydrogenase (NADP+)] [GN:odhA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis odhA gene for 2-oxoglutarate dehydrogenase.] [SP:P23129] [LE:291] [RE:3104] [DI:direct] >gp:[GI:e1185409:g2634330] [LN:BSUB0011] [AC:Z99114:AL009126] [PN:2-oxoglutarate dehydrogenase (E1 subunit)] [GN:odhA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.2.4.2] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] NT:alternate gene name: citK] [SP:P23129] [LE:107873] [RE:110686] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24800461_c1_1138 356 4128 231 76 235 1.7e−18 Description sp:[LN:ODO1_BACSU] [AC:P23129] [GN:ODHA:CITK] [OR:BACILLUS SUBTILIS] [EC:1.2.4.2] [DE:KETOGLUTARATE DEHYDROGENASE)] [SP:P23129] [DB:swissprot] >pir:[LN:A32879] [AC:S25295:A32879:E69668:S14544] [PN:oxoglutarate dehydrogenase (lipoamide),] [GN:odhA] [CL:oxoglutarate dehydrogenase (lipoamide):thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [EC:1.2.4.2] [DB:pir2] >gp:[GI:g40003] [LN:BSODHA] [AC:X54805:S43328] [PN:oxoglutarate dehydrogenase (NADP+)] [GN:odhA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis odhA gene for 2-oxoglutarate dehydrogenase.] [SP:P23129] [LE:291] [RE:3104] [DI:direct] >gp:[GI:e1185409:g2634330] [LN:BSUB0011] [AC:Z99114:AL009126] [PN:2-oxoglutarate dehydrogenase (E1 subunit)] [GN:odhA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.2.4.2] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] [NT:alternate gene name: citK] [SP:P23129] [LE:107873] [RE:110686] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24807790_c1_1048 357 4129 909 302 687 1.2e−67 Description Sp:[LN:ISPA_BACST] [AC:Q08291] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:2.5.1.10] [DE:(FPP SYNTHASE)] [SP:Q08291] [DB:swissprot] >pir:[LN:JX0257] [AC:JX0257] [PN:geranyltranstransferase,:farnesyl-diphosphate synthase] [CL:geranyltranstransferase] [OR:Bacillus stearothermophilus] [EC:2.5.1.10] [DB:pir2] >gp:[GI:d1003054:g391610] [LN:BACFDPS] [AC:D13293] [PN:farnesyl diphosphate synthase] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain:ATCC10149) DNA] [DB:genpept-bct1] [EC:2.5.1.10] [DE:B. stearothermophilus DNA for farnesyl diphosphate synthase, complete cds.] [LE:85] [RE:978] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24823311_c3_1404 358 4130 210 69 76 0.0065 Description pir:[LN:B21124] [AC:B21124] [PN:Bkm-like sex-determining region hypothetical protein CS314] [GN:Bkm] [OR:Drosophila melanogaster] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24886562_f3_771 359 4131 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_24886587_c2_1175 360 4132 2448 815 1981 2.3e−207 Description pir:[LN:A69979] [AC:A69979] [PN:conjugation transfer protein homolog yrrC] [GN:yrrC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183977:g2635193] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrrC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to conjugation transfer protein] [LE:206106] [RE:208502] [DI:complement] >gp:[GI:e1183995:g2635211] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yrrC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to conjugation transfer protein] [LE:10426] [RE:12822] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2542188_c1_1026 361 4133 270 89 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25423425_f2_337 362 4134 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25428378_f2_336 363 4135 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25502217_c2_1157 364 4136 615 204 410 2.7e−38 Description sp:[LN:RUVA_BACSU] [AC:O05392] [GN:RUVA] [OR:BACILLUS SUBTILIS] [DE:PROBABLE HOLLIDAY JUNCTION DNA HELICASE RUVA] [SP:O05392] [DB:swissprot] >pir:[LN:E69702] [AC:E69702] [PN:Holliday junction DNA helicase ruvA] [GN:ruvA] [CL:holliday junction DNA helicase ruvA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184023:g2635239] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:Holliday junction DNA helicase] [GN:ruvA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O05392] [LE:40296] [RE:40901] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25595186_c2_1177 365 4137 651 216 736 7.6e−73 Description pir:[LN:G69728] [AC:G69728] [PN:uridine kinase udk] [GN:udk] [CL:uridine kinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183963:g2635179] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:uridine kinase] [GN:udk] [FN:pyrimidine salvage] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.48] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [LE:192038] [RE:192673] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25598818_c3_1420 366 4138 1692 563 1195 1.7e−121 Description sp:[LN:RECN_BACSU] [AC:P17894:P19671] [GN:RECN] [OR:BACILLUS SUBTILIS] [DE:DNA REPAIR PROTEIN RECN (RECOMBINATION PROTEIN N)] [SP:P17894:P19671] [DB:swissprot] >pir:[LN:B35128] [AC:B35128:PS0054:H69690] [PN:DNA repair and genetic recombination protein recN] [GN:recN] [CL:recN protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013258:g1303923] [LN:BACJH642] [AC:D84432:D82370] [PN:RecN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:197319] [RE:199049] [DI:direct] >gp:[GI:g143402] [LN:BACRECN] [AC:M30297] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) DNA] [DB:genpept-bct1] [DE:B. subtilis recombination and sporulation protein (recN, spoIVB)genes, complete cds, arginine hydroximate resistance (ahrC) gene, 3′ end.] [NT:recombination protein (ttg start codon)] [LE:131] [RE:1861] [DI:direct] >gp:[GI:e1185692:g2634858] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:recN] [FN:DNA repair and genetic recombination] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P17894] [LE:124572] [RE:126302] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25652217_c3_1470 367 4139 348 115 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25672337_c1_1016 368 4140 780 259 371 3.6e−34 Description sp:[LN:YQXN_BACSU] [AC:P42095] [GN:YQXN:YQFI] [OR:BACILLUS SUBTILIS] [DE:(ORF3)] [SP:P42095] [DB:swissprot] >pir:[LN:H69968] [AC:H69968] [PN:conserved hypothetical protein yqxN] [GN:yqxN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013162:g1303827] [LN:BACJH642] [AC:D84432:D82370] [PN:YqfI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:109891] [RE:110658] [DI:direct] >gp:[GI:e1185794:g2634960] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqxN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:alternate gene name:yqfI; similar to hypothetical] [SP:P42095] [LE:212962] [RE:213729] [DI:complement] >gp:[GI:e1183758:g2634974] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqxN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:alternate gene name:yqfI; similar to hypothetical] [SP:P42095] [LE:8772] [RE:9539] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_25680218_c2_1201 369 4141 726 241 425 6.8e−40 Description sp:[LN:YQEZ_BACSU] [AC:P54465] [GN:YQEZ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 46.5 KD PROTEIN IN RPSU-PHOH INTEREGENIC REGION] [SP:P54465] [DB:swissprot] >pir:[LN:H69952] [AC:H69952 ] [PN:hypothetical protein yqeZ] [GN:yqeZ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013151:g1303816] [LN:BACJH642] [AC:D84432:D82370] [PN:YqeZ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:99826] [RE:101139] [DI:direct] >gp:[GI:e1183769:g2634985] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqeZ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [SP:P54465] [LE:18291] [RE:19604] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26058467_c1_1064 370 4142 213 70 119 9.1e−07 Description gp:[GI:g861340] [LN:CELE04F6] [AC:U28943] [GN:E04F6.7] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain=Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid E04F6.] [NT:similar to ribitol dehydrogenase] [LE:20096:20706:20893] [RE:20659:20814:21152] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26203942_c3_1388 371 4143 630 209 636 3.0e−62 Description pir:[LN:A69969] [AC:A69969] [PN:conserved hypothetical protein yqzB] [GN:yqzB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185791:g2634957] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqzB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to hypothetical proteins] [LE:208975] [RE:209613] [DI:complement] >gp:[GI:e1183755:g2634971] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqzB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [LE:4785] [RE:5423] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26209425_c1_1022 372 4144 1068 355 1672 4.9e−172 Description sp:[LN:RPSD_STAAU] [AC:P26766] [GN:RPOD:PLAC] [OR:STAPHYLOCOCCUS AUREUS] [DE:RNA POLYMERASE SIGMA FACTOR RPOD] [SP:P26766] [DB:swissprot] >pir:[LN:S34442] [AC:S34442] [PN:transcription initiation factor sigma plaC] [GN:plaC] [CL:transcription initiation factor sigma 43:transcription initiation factor sigma katF homology:transcription initiation factor sigma region 1 homology] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g153069] [LN:STAPLAC] [AC:M63177] [PN:sigma factor] [GN:plaC] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain SA20) DNA] [DB:genpept-bct1] [DE:S. aureus sigma factor (plaC) gene, complete cds.] [LE:820] [RE:1926] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26212501_c3_1394 373 4145 852 283 797 2.6e−79 Description gp:[GI:g5019735] [LN:AF104349] [AC:AF104349] [PN:hydrophobic membrane protein ZurM] [GN:zurM] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes zinc-like uptake operon, complete sequence.] [LE:860] [RE:1747] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26225463_c1_1070 374 4146 741 246 821 7.4e−82 Description sp:[LN:RESD_BACSU] [AC:P35163] [GN:RESD] [OR:BACILLUS SUBTILIS] [DE:TRANSCRIPTIONAL REGULATORY PROTEIN RESD] [SP:P35163] [DB:swissprot] >pir:[LN:G69691] [AC:G69691:S45559] [PN:two-component response regulator involved in aerobic and anaer resD] [GN:resD] [CL:ompR protein:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g410141] [LN:BACDIA] [AC:L09228] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis spoVA to serA region.] [NT:ORFX17] [LE:21706] [RE:22428] [DI:direct] >gp:[GI:e1185581:g2634747] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:two-component response regulator] [GN:resD] [FN:activation role in global regulation of aerobic] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:alternate gene name:ypxD] [SP:P35163] [LE:21155] [RE:21877] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26251577_c1_994 375 4147 354 117 372 2.8e−34 Description sp:[LN:YQEL_BACSU] [AC:P54457] [GN:YQEL] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 13.3 KD PROTEIN IN AROD-COMER INTERGENIC REGION] [SP:P54457] [DB:swissprot] >pir:[LN:H69951] [AC:H69951] [PN:ybeB protein homolog yqeL] [GN:yqeL] [CL:Escherichia coli ybeB protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013128:g1303793] [LN:BACJH642] [AC:D84432:D82370] [PN:YqeL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:76417] [RE:76773] [DI:direct] >gp:[GI:e1183792:g2635008] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqeL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [SP:P54457] [LE:42657] [RE:43013] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26259657_c1_1051 376 4148 1425 474 1155 3.0e−117 Description sp:[LN:DLD2_BACSU] [AC:P54533] [GN:BFMBC] [OR:BACILLUS SUBTILIS] [EC:1.8.1.4] [DE:DEHYDROGENASE) (LPD-VAL)] [SP:P54533] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26306713_c2_1332 377 4149 912 303 580 2.6e−56 Description pir:[LN:S72642] [AC:S72642] [PN:probable ABC-type transport protein xynB] [GN:xynB] [OR:Thermoanaerobacterium thermosulfurigenes] [DB:pir2] >gp:[GI:g1255237] [LN:TTU50952] [AC:U50952] [PN:XynB] [GN:xynB] [OR:Thermoanaerobacterium thermosulfurigenes] [DB:genpept-bct1] [DE:Thermoanaerobacterium thermosulfurigenes endoxylanase precursor (XynA) and membrane component of an ABC transporter (XynB) genes, complete cds and XynC (xynC) gene, partial cds.] [NT:Description:membrane component of an ABC] [LE:454] [RE:1359] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26368950_c2_1264 378 4150 1380 459 744 4.7e−76 Description sp:[LN:RECQ_BACSU] [AC:P50729] [GN:RECQ] [OR:BACILLUS SUBTILIS] [EC:3.6.1.-] [DE:ATP-DEPENDENT DNA HELICASE RECQ,] [SP:P50729] [DB:swissprot] >pir:[LN:A69691] [AC:A69691] [PN:ATP-dependent DNA helicase homolog:ATP-dependent DNA helicase recQ] [GN:recQ] [CL:DEAD/H box helicase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183747:g2634720] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:ATP-dependent DNA helicase] [GN:recQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.6.1.-] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [SP:P50729] [LE:210616] [RE:212106] [DI:complement] >gp:[GI:e1185571:g2634737] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:ATP-dependent DNA helicase] [GN:recQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.6.1.-] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [SP:P50729] [LE:10896] [RE:12386] [DI:complement] >gp:[GI:g1146200] [LN:BACSERA] [AC:L47648] [PN:DNA or RNA helicase, DNA-dependent ATPase] [GN:recS] [FN:DNA repair and homologous recombination] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependent glycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:similar to Escherichia coli recQ gene product;] [LE:4291] [RE:5781] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26384682_c1_1092 379 4151 1248 415 561 2.6e−54 Description sp:[LN:YPIA_BACSU] [AC:P54389] [GN:YPIA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 48.3 KD PROTEIN IN QCRA-AROE INTERGENIC REGION] [SP:P54389] [DB:swissprot] >pir:[LN:E69936] [AC:E69936] [PN:conserved hypothetical protein ypiA] [GN:ypiA] [CL:tetratricopeptide repeat homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146224] [LN:BACYPIA] [AC:L47709] [GN:ypiA] [FN:hypothetical] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes, ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:putative] [LE:348] [RE:1619] [DI:direct] >gp:[GI:e1183704:g2634677] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypiA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to hypothetical proteins] [SP:P54389] [LE:170048] [RE:171319] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26597186_c1_1056 380 4152 444 147 544 1.7e−52 Description sp:[LN:YQIW_BACSU] [AC:P54534] [GN:YQIW] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 16.2 KD PROTEIN IN BMRU-ANSR INTERGENIC REGION] [SP:P54534] [DB:swissprot] >pir:[LN:E69962] [AC:E69962] [PN:conserved hypothetical protein yqiW] [GN:yqiW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013283:g1303948] [LN:BACJH642] [AC:D84432:D82370] [PN:YqiW] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:226148] [RE:226585] [DI:direct] >gp:[GI:e1185667:g2634833] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqiW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to hypothetical proteins from B. subtilis] [LE:97034] [RE:97471] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26600137_f2_493 381 4153 531 176 188 8.9e−15 Description sp:[LN:YPUF_BACSU] [AC:P17617] [GN:YPUF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 21.0 KD PROTEIN IN RIBT-DACB INTERGENIC REGION (ORFX6)] [SP:P17617] [DB:swissprot] >pir:[LN:S45548] [AC:S45548:E69942] [PN:hypothetical protein ypuF] [GN:ypuF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g410130] [LN:BACDIA] [AC:L09228] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [DEBacillus subtilis spoVA to serA regions.] [NT:ORFX6] [LE:12218] [RE:12742] [DI:complement] >gp:[GI:g580916] [LN:BSRIB] [AC:X51510] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis riboflavin biosynthesis operon ribG, ribB, ribA, ribH, and ribT genes.] [NT:ORF Y (AA 1–174)] [SP:P17617] [LE:5164] [RE:5688] [DI:complement] >gp:[GI:e1185592:g2634758] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:ypuF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [SP:P17617] [LE:30841] [RE:31365] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26752312_c3_1396 382 4154 171 56 229 4.0e−19 Description sp:[LN:RL33_BACST] [AC:P23375] [GN:RPMG] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L33] [SP:P23375] [DB:swissprot] >pir:[LN:B48396] [AC:B48396] [PN:ribosomal protein L33] [CL:Escherichia coli ribosomal protein L33] [OR:Bacillus stearothermophilus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26754662_c3_1454 383 4155 672 223 514 2.5e−49 Description sp:[LN:KCY_BACSU] [AC:P38493] [GN:CMK:JOFC] [OR:BACILLUS SUBTILIS] [EC:2.7.4.14] [DE:(CMP KINASE)] [SP:P38493] [DB:swissprot] >pir:[LN:F69601] [AC:F69601] [PN:cytidylate kinase cmk] [GN:cmk] [CL:cytidylate kinase cmk] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g533105] [LN:BSU11687] [AC:U11687] [PN:unknown] [GN:jofC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 jofA, jofB, MssA homolog (jofC) and ribosomal protein S1 homolog (jofD) genes, complete cds, and joeB gene, partial cds.] [NT:similar to the Escherichia coli mssA gene product] [LE:1744] [RE:2418] [DI:direct] >gp:[GI:e1183734:g2634707] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:cytidylate kinase] [GN:cmk] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.4.14] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [NT:alternate gene name:jofC, ypfC] [SP:P38493] [LE:199742] [RE:200416] [DI:complement] >gp:[GI:e1185558:g2634724] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:cytidylate kinase] [GN:cmk] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.4.14] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:alternate gene name:jofC, ypfC] [SP:P38493] [LE:22] [RE:696] [DI:complement] >gp:[GI:g1146214] [LN:BACSERA] [AC:L47648] [PN:cytidine monophosphate kinase] [GN:cmk] [FN:cytidine diphosphate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependent glycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes complete cds.] [NT:similar to Escherichia coli smba supress; putative] [LE:15981] [RE:16655] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26754750_c2_1172 384 4156 1164 387 895 1.1e−89 Description pir:[LN:E69981] [AC:E69981] [PN:NifS protein homolog homolog yrvO] [GN:yrvO] [CL:nitrogen fixation protein nifS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183981:g2635197] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrvO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to NifS protein homolog] [LE:210475] [RE:211515] [DI:complement] >gp:[GI:e1183999:g2635215] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yrvO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to NifS protein homolog] [LE:14795] [RE:15835] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26772135_c1_1000 385 4157 996 331 555 1.1e−53 Description sp:[LN:YQEN_BACSU] [AC:P54459] [GN:YQEN] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 40.5 KD PROTEIN IN COMEC-RPST INTERGENIC REGION] [SP:P54459] [DB:swissprot] >pir:[LN:B69952] [AC:B69952] [PN:conserved hypothetical protein yqeN] [GN:yqeN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013134:g1303799] [LN:BACJH642] [AC:D84432:D82370] [PN:YqeN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:82475] [RE:83518] [DI:direct] >gp:[GI:e1183786:g2635002] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqeN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to hypothetical proteins] [SP:P54459] [LE:35912] [RE:36955] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_26774062_c2_1268 386 4158 1332 443 1670 8.0e−172 Description sp:[LN:YPHC_BACSU] [AC:P50743] [GN:YPHC] [OR:BACILLUS SUBTILIS] [DE:REGION] [SP:P50743] [DB:swissprot] >pir:[LN:A69936] [AC:A69936] [PN:conserved hypothetical protein yphC] [GN:yphC] [CL:Mycobacterium leprae probable GTP-binding protein:translation elongation factor Tu homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183729:g2634702] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:yphC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to hypothetical proteins] [LE:193903] [RE:195213] [DI:complement] >gp:[GI:g1146219] [LN:BACSERA] [AC:L47648] [GN:yphC] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependent glycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:similar to Escherichia coli GTP-binding protein] [LE:21184] [RE:22494] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000982_2756288_c2_1257 387 4159 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_10000128_f2_399 388 4160 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_10195942_c3_1056 389 4161 636 211 253 1.2e−21 Description sp:[LN:TRPF_THEMA] [AC:Q56320] [GN:TRPF] [OR:THERMOTOGA MARITIMA] [EC:5.3.1.24] [DE:N-(5′-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE, (PRAI)] [SP:Q56320] [DB:swissprot] >pir:[LN:S59048] [AC:S59048] [PN:phosphoribosyl anthranilate isomerase trpF] [GN:trpF] [CL:phosphoribosylanthranilate isomerase:trpF homology] [OR:Thermotoga maritima] [DB:pir2] >gp:[GI:g1054860] [LN:TMTRABCDF] [AC:X92729] [PN:phosphoribosyl anthranilate isomerase] [GN:trpF] [OR:Thermotoga maritima] [DB:genpept-bct1] [DE:T. maritima trpD, trpC, trpF, trpB, and trpA genes.] [SP:Q56320] [LE:1012] [RE:1629] [DI:direct] >gp:[GI:g4980631] [LN:AE001699] [AC:AE001699:AE000512] [PN:phosphoribosylanthranilate isomerase] [GN:TM0139] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 11 of 136 of the complete genome.] [NT:similar to PID:1054860 SP:Q56320 GB:AE000512] [LE:7969] [RE:8586] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_10553766_f2_397 390 4162 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1058463_c3_978 391 4163 2121 706 2472 8.3e−257 Description pir:[LN:S70691] [AC:S70691:C69680] [PN:polyribonucleotide nucleotidyltransferase, alpha chain pnpA:polynucleotide phosphorylase pnpA] [GN:pnpA] [CL:polyribonucleotide nucleotidyltransferase alpha chain] [OR:Bacillus subtilis] [EC:2.7.7.8] [DB:pir2] >gp:[GI:e1185260:g2634041] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:polynucleotide phosphorylase (PNPase)] [GN:pnpA] [FN:necessary for competence development] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.8] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name: comR] [SP:P50849] [LE:140354] [RE:142471] [DI:direct] >gp:[GI:g1184680] [LN:BSU29668] [AC:U29668] [PN:polynucleotide phosphorylase] [GN:pnpA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ribosomal protein RpsO (rpsO) gene, partial cds, and polynucleotide phosphorylase (pnpA) gene, complete cds.] [LE:224] [RE:2341] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_10657925_c3_1017 392 4164 948 315 573 1.4e−55 Description pir:[LN:H69722] [AC:H69722:B25364] [PN:homoserine kinase,] [GN:thrB] [CL:homoserine kinase thrB] [OR:Bacillus subtilis] [EC:2.7.1.39] [DB:pir2] >gp:[GI:e1184303:g2635721] [LN:BSUB0017] [AC:Z99120:AL009126] [PN:homoserine kinase] [GN:thrB] [FN:threonine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.39] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:alternate gene name:thrA] [LE:114902] [RE:115831] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_10667002_f2_278 393 4165 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1074090_c1_728 394 4166 906 301 697 1.0e−68 Description sp:[LN:CODV_BACSU] [AC:P39776] [GN:CODV] [OR:BACILLUS SUBTILIS] [DE:PROBABLE INTEGRASE/RECOMBINASE CODV] [SP:P39776] [DB:swissprot] >pir:[LN:G69601] [AC:G69601:S61493:S72309] [PN:integrase/recombinase codV] [GN:codV] [CL:probable site-specific integrase/recombinase XerC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g535348] [LN:BSU13634] [AC:U13634] [PN:CodV] [GN:codV] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis JH642 dipeptide permease operon regulators, codV, codW, codX, and codY genes, complete cds.] [LE:293] [RE:1207] [DI:direct] >gp:[GI:e1185205:g2633986] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:integrase/recombinase] [GN:codV] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P39776] [LE:88166] [RE:89080] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_10975428_f2_340 395 4167 879 292 80 0.013 Description sp:[LN:BICD_DROME] [AC:P16568] [GN:BICD] [OR:DROSOPHILA MELANOGASTER] [SR:, FRUIT FLY] [DE:CYTOSKELETON-LIKE BICAUDAL D PROTEIN] [SP:P16568] [DB:swissprot] >pir:[LN:A33636] [AC:A33636] [PN:bicaudal protein D] [GN:BicD] [OR:Drosophila melanogaster] [DB:pir2] >gp:[GI:g157006] [LN:DROBICD] [AC:M31684] [OR:Drosophila melanogaster] [SR:D. melanogaster (strain DfTW119) embryo, cDNA to mRNA] [DB:genpept-inv1] [DE:D. melanogaster cytoskeleton-like bicaudalD protein (BicD) mRNA, complete cds.] [NT:bicaudalD protein] [LE:132] [RE:2480] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1179775_f1_70 396 4168 132 43 42 0.029 Description pir:[LN:S78676] [AC:S78676:S78677] [PN:hypothetical protein Q0144] [OR:mitochondrion Saccharomyces cerevisiae] [DB:pir2] >gp:[GI:e1370708:g4160384] [LN:SCE011856] [AC:AJ011856] [OR:Mitochondrion Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [DE:Saccharomyces cerevisiae complete mitochondrial genome.] [NT:ORF Q0144] [LE:54109] [RE:54438] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_11817625_f1_65 397 4169 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1183337_c2_847 398 4170 447 148 303 5.8e−27 Description sp:[LN:NUSA_BACSU] [AC:P32727] [GN:NUSA] [OR:BACILLUS SUBTILIS] [DE:N UTILIZATION SUBSTANCE PROTEIN A HOMOLOG (NUSA PROTEIN)] [SP:P32727] [DB:swissprot] >pir:[LN:C36905] [AC:C36905:B69668:S31991] [PN:transcription termination-antitermination factor nusA] [GN:nusA] [CL:Bacillus transcription termination factor nusA:transcription termination factor nusA homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g49316] [LN:BSORF1T7A] [AC:Z18631] [GN:ORF2] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis infB-nusA operon.] [SP:P32727] [LE:961] [RE:2076] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_11844802_c2_941 399 4171 327 108 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_11926627_f3_614 400 4172 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_11930317_c3_974 401 4173 336 111 251 1.9e−21 Description sp:[LN:YLXQ_BACSU] [AC:P32729] [GN:YLXQ] [OR:BACILLUS SUBTILIS] [DE:PROBABLE RIBOSOMAL PROTEIN IN NUSA-INFB INTERGENIC REGION (ORF4)] [SP:P32729] [DB:swissprot] >pir:[LN:E36905] [AC:E36905:C69882:S31993] [PN:ribosomal protein L7AE family homolog ylxQ:hypothetical protein 2 (infB 5′ region)] [GN:ylxQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g49318] [LN:BSORF1T7A] [AC:Z18631] [GN:ORF4] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis infB-nusA operon.] [SP:P32729] [LE:2367] [RE:2669] [DI:direct] >gp:[GI:e1185253:g2634034] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylxQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:ymxC; similar to ribosomal] [SP:P32729] [LE:134658] [RE:134960] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1212785_f1_108 402 4174 213 70 74 0.048 Description pir:[LN:G70047] [AC:G70047] [PN:conserved hypothetical protein yvrM] [GN:yvrM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184405:g2635823] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yvrM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:214190] [RE:214951] [DI:complement] >gp:[GI:e1186014:g2635839] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvrM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:11640] [RE:12401] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_12694082_c2_889 403 4175 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_12703763_f3_592 404 4176 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13087513_c2_907 405 4177 3033 1010 417 4.1e−65 Description pir:[LN:D71302] [AC:D71302] [PN:probable exonuclease (sbcC)] [GN:TP0627] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322922] [LN:AE001237] [AC:AE001237:AE000520] [PN:exonuclease (sbcC)] [GN:TP0627] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 53 of 87 of the complete genome.] [NT:similar to SP:P13458 GB:X15981 PID:145327 PID:42914] [LE:12418] [RE:15561] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13179692_c1_724 406 4178 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1360958_c2_905 407 4179 270 89 109 2.1e−06 Description pir:[LN:C69891] [AC:C69891:S57406] [PN:yneJ protein:protein 160] [GN:yneJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e249647:g1405451] [LN:BC170DEGR] [AC:Z73234] [PN:YneJ] [GN:yneJ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [NT:identical to yoxI (from acc. no. X87845)] [SP:P45710] [LE:6147] [RE:6638] [DI:direct] >gp:[GI:e1183454:g2634179] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:yneJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:alternate gene name:yoxI] [SP:P45710] [LE:142526] [RE:143017] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13678135_f3_575 408 4180 159 52 84 0.00093 Description pir:[LN:B71622] [AC:B71622] [PN:metal binding protein (DHHC domain) PFB0140w] [GN:PFB0140w] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845106] [LN:AE001375] [AC:AE001375:AE001362] [PN:metal binding protein (DHHC domain)] [GN:PFB0140w] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 12 of 73 of the complete sequence.] [NT:identified by sequence similarity; putative] [LE:814] [RE:1050] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13678462_f1_15 409 4181 564 187 303 5.8e−27 Description sp:[LN:SPHX_SYNP7] [AC:P39665] [GN:SPHX] [OR:SYNECHOCOCCUS SP] [SR:PCC 7942, ANACYSTIS NIDULANS R2] [DE:SPHX PROTEIN PRECURSOR] [SP:P39665] [DB:swissprot] >pir:[LN:S54402] [AC:S54402] [PN:SphX protein] [CL:sphX protein] [OR:Synechococcus sp.] [DB:pir2] >gp:[GI:d1005689:g496319] [LN:SYOSPHX] [AC:D26161] [PN:SphX] [GN:sphX] [OR:Synechococcus sp.] [SR:Synechococcus sp. (strain:PCC7942) DNA] [DB:genpept-bct1] [DE:Synechococcus sp. sphX gene for phosphate regulon SphX, complete cds.] [LE:317] [RE:1330] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13691280_f1_42 410 4182 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13845300_f2_231 411 4183 309 102 79 0.0065 Description sp:[LN:YCIB_BUCAP] [AC:P42397] [OR:BUCHNERA APHIDICOLA] [DE:HYPOTHETICAL 21.4 KD PROTEIN IN TRPA 3′REGION] [SP:P42397] [DB:swissprot] >pir:[LN:F49897] [AC:F49897:S36433] [PN:protein VI (trpA 3′-region)] [OR:Buchnera aphidicola] [DB:pir2] >gp:[GI:g396663] [LN:BATRYOPEA] [AC:Z19055] [PN:ORF 6] [OR:Buchnera aphidicola] [DB:genpept-bct1] [DE:B. aphidicola tryptophan operon.] [NT:homologous to E. coli ORF6 located downstream of] [SP:P42397] [LE:7540] [RE:8073] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_13875216_c3_1046 412 4184 1023 340 895 1.1e−89 Description gp:[GI:e1181777:g2632149] [LN:SCY14029] [AC:Y14029] [PN:antiterminator] [GN:glcT] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:Staphylococcus carnosus glcT gene.] [LE:213] [RE:1076] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14251643_f3_547 413 4185 309 102 143 5.2e−10 Description pir:[LN:H69891] [AC:H69891] [PN:hypothetical protein yneR] [GN:yneR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e249654:g1405458] [LN:BC170DEGR] [AC:Z73234] [PN:YneR] [GN:yneR] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [LE:13221] [RE:13508] [DI:complement] >gp:[GI:e1183464:g2634189] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:yneR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [LE:149600] [RE:149887] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14457876_f3_521 414 4186 135 44 194 2.1e−15 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14471938_c3_1027 415 4187 183 60 231 2.5e−19 Description sp:[LN:RL33_BACST] [AC:P23375] [GN:RPMG] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L33] [SP:P23375] [DB:swissprot] >pir:[LN:B48396] [AC:B48396] [PN:ribosomal protein L33] [CL:Escherichia coli ribosomal protein L33] [OR:Bacillus stearothermophilus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_1461588_f1_16 416 4188 942 313 712 2.6e−70 Description pir:[LN:D69419] [AC:D69419] [PN:phosphate ABC transporter, permease protein (pstC) homolog] [CL:phoW protein] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649218] [LN:AE001010] [AC:AE001010:AE000782] [PN:phosphate ABC transporter, permease protein] [GN:AF1357] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 97 of 172 of the complete genome.] [NT:similar to SP:P46339 PID:903304 PID:1303855] [LE:5294] [RE:6187] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14634450_f1_1 417 4189 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14723387_c2_904 418 4190 282 93 250 2.4e−21 Description sp:[LN:YNEF_BACSU] [AC:P45708] [GN:YNEF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 8.3 KD PROTEIN IN TTK-CCDA INTERGENIC REGION] [SP:P45708] [DB:swissprot] >pir:[LN:S57403] [AC:S57403:A69891] [PN:hypothetical protein yneF] [GN:yneF] [CL:conserved hypothetical protein yneF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e249644:g1405448] [LN:BC170DEGR] [AC:Z73234] [PN:YneF] [GN:yneF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [NT:identical to yoxG (from acc. no. X87845)] [SP:P45708] [LE:4225] [RE:4443] [DI:direct] >gp:[GI:g870924] [LN:BSTKTCCDA] [AC:X87845] [GN:orf] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ORF120, ORF160, tkt and ccdA genes.] [SP:P45708] [LE:1011] [RE:1229] [DI:direct] >gp:[GI:e1183450:g2634175] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:yneF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [NT:alternate gene name:yoxG] [SP:P45708] [LE:140604] [RE:140822] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14850082_f1_18 419 4191 933 310 880 4.2e−88 Description sp:[LN:YQGK_BACSU] [AC:P46342] [GN:YQGK] [OR:BACILLUS SUBTILIS] [DE:INTERGENIC REGION (ORF75)] [SP:P46342] [DB:swissprot] >pir:[LN:E69956] [AC:E69956] [PN:phosphate ABC transporter (ATP-binding pro) homolog yqgK] [GN:yqgK] [CL:inner membrane protein malK:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013193:g1303858] [LN:BACJH642] [AC:D84432:D82370] [PN:YqgK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:141613] [RE:142395] [DI:direct] >gp:[GI:d1010228:g903307] [LN:BACPST] [AC:D58414] [PN:ORF75] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642 (trpC2 pheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for homologues of the E. coli pst gene products.] [NT:Similality to phosphate transport protein (PstB) of] [LE:3782] [RE:4564] [DI:direct] >gp:[GI:e1185762:g2634928] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqgK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:alternate gene name:yzmF; similar to phosphate ABC] [SP:P46342] [LE:181226] [RE:182008] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14876553_c2_919 420 4192 996 331 570 2.9e−55 Description gp:[GI:g1147744] [LN:EHU42211] [AC:U42211] [PN:PBP 5 synthesis repressor] [GN:psr] [FN:involved in the regulation of penicillin] [OR:Enterococcus hirae] [DB:genpept-bct2] [DE:Enterococcus hirae PBP 5 synthesis repressor (psr) gene, complete cds.] [LE:746] [RE:1627] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_14901512_c3_1012 421 4193 552 183 500 7.7e−48 Description sp:[LN:NUC_STAIN] [AC:P43269] [GN:NUCI:NUC] [OR:STAPHYLOCOCCUS INTERMEDIUS] [EC:3.1.31.1] [DE:(STAPHYLOCOCCAL NUCLEASE)] [SP:P43269] [DB:swissprot] >pir:[LN:S26079] [AC:S26079] [PN:thermonuclease] [CL:micrococcal nuclease] [OR:Staphylococcus intermedius] [DB:pir2] >gp:[GI:g47146] [LN:SINUC8] [AC:X67678] [PN:thermonuclease] [GN:nuc] [OR:Staphylococcus intermedius] [DB:genpept-bct1] [DE:S. intermedius nuc gene for thermonuclease.] [SP:P43269] [LE:495] [RE:1001] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_15084826_c3_1034 422 4194 300 99 268 3.0e−23 Description sp:[LN:CCDC_BACSU] [AC:P45710] [GN:CCDC] [OR:BACILLUS SUBTILIS] [DE:CCDC PROTEIN] [SP:P45710] [DB:swissprot] >gp:[GI:g870927] [LN:BSTKTCCDA] [AC:X87845] [GN:ORF160] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ORF120, ORF160, tkt and ccdA genes.] [SP:P45710] [LE:2942] [RE:3424] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_15757712_f1_23 423 4195 732 243 686 1.5e−67 Description gp:[GI:g3800828] [LN:AF076684] [AC:AF076684] [PN:oligopeptide transporter putative ATPase domain] [GN:opp-2F] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative membrane permease domain (opp-2B), oligopeptide transporter putative membrane permease domain (opp-2C), oligopeptide transporter putative ATPase domain (opp-2D), and oligopeptide transporter putative ATPase domain (opp-2F) genes, complete cds.] [LE:2735] [RE:3436] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_15803510_c2_854 424 4196 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_16205378_c1_815 425 4197 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_162843_f2_330 426 4198 468 155 395 1.0e−36 Description Sp:[LN:LYSP_ECOLI] [AC:P25737] [GN:LYSP:CADR] [OR:ESCHERICHIA COLI] [DE:LYSINE-SPECIFIC PERMEASE] [SP:P25737] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_16835388_f1_19 427 4199 654 217 265 6.2e−23 Description gp:[GI:d1023735:g2547082] [LN:D89963] [AC:D89963] [PN:negative regulatory protein of pho regulon] [GN:phoU] [OR:Enterobacter cloacae] [SR:Enterobacter cloacae (strain:IFO3320) DNA] [DB:genpept-bct1] [DE:Enterobacter cloacae pstS, pstC, pstA, pstB and phoU genes, complete cds.] [NT:The phoU gene is required for chemotaxis to ward] [LE:4554] [RE:5279] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_17040911_c1_771 428 4200 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_190707_f1_81 429 4201 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_194431_c3_1033 430 4202 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_19540678_c1_797 431 4203 438 145 270 7.7e−23 Description gp:[GI:g4835822] [LN:AF102174] [AC:AF102174] [PN:glycine betaine transporter BetL] [GN:betL] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes glycine betaine transporter BetL (betL)gene, complete cds.] [LE:209] [RE:1732] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_19730438_c2_926 432 4204 1272 423 2221 3.3e−230 Description pir:[LN:JC5326] [AC:JC5326] [PN:methicillin resistance factor FEMB] [GN:femB] [CL:methicillin resistance factor femA] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g1815620] [LN:SEU23714] [AC:U23714] [PN:FEMB] [GN:femB] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis factor essential for methicillin resistance FEMB (femB) gene, complete cds.] [NT:Factor essential for methicillin resistance] [LE:33] [RE:1286] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_19735887_c1_754 433 4205 1581 526 1924 9.7e−199 Description pir:[LN:D69884] [AC:D69884] [PN:conserved hypothetical protein ymcB] [GN:ymcB] [CL:conserved hypothetical protein b0835] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185292:g2634073] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymcB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:173791] [RE:175320] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_19953281_c3_1016 434 4206 1347 448 822 5.8e−82 Description sp:[LN:DHOM_BACSU] [AC:P19582] [GN:HOM:TDM] [OR:BACILLUS SUBTILIS] [EC:1.1.1.3] [DE:HOMOSERINE DEHYDROGENASE, (HDH)] [SP:P19582] [DB:swissprot] >gp:[GI:g558494] [LN:BACHOM] [AC:M23217:J04034] [PN:homoserine dehydrogenase] [GN:hom] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [EC:1.1.1.3] [DE:Bacillus subtilis homoserine dehydrogenase (hom) gene, complete cds, threonine synthase (thrC) gene, 5′ end of cds.] [LE:276] [RE:1577] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20086512_c2_899 435 4207 654 217 780 1.6e−77 Description gp:[GI:g3064126] [LN:AF011784] [AC:AF011784] [PN:catalase] [GN:katA] [OR:Vibrio fischeri] [DB:genpept-bct2] [DE:Vibrio fischeri catalase (katA) gene, complete cds.] [LE:256] [RE:1704] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20095803_c3_994 436 4208 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20312510_f3_506 437 4209 1041 346 1070 3.1e−108 Description gp:[GI:g3800825] [LN:AF076684] [AC:AF076684] [PN:oligopeptide transporter putative membrane] [GN:opp-2B] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative membrane permease domain (opp-2B), oligopeptide transporter putative membrane permease domain (opp-2C), oligopeptide transporter putative ATPase domain (opp-2D), and oligopeptide transporter putative ATPase domain (opp-2F) genes, complete cds.] [LE:173] [RE:1159] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20347165_f3_485 438 4210 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20370457_c2_884 439 4211 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20400051_f2_319 440 4212 810 269 691 4.4e−68 Description sp:[LN:LEXA_BACSU] [AC:P31080] [GN:LEXA:DINR] [OR:BACILLUS SUBTILIS] [DE:SOS REGULATORY PROTEIN LEXA/DINR] [SP:P31080] [DB:swissprot] >pir:[LN:A41315] [AC:A41315:B69651] [PN:transcription repressor of SOS regulon lexA/dinR] [GN:lexA:dinR] [CL:lexA protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g289288] [LN:BACLEXA] [AC:M64684] [GN:lexA] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis lexA gene, 3′ end.] [LE:390] [RE:1007] [DI:direct] >gp:[GI:e1183444:g2634169] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:transcriptional regulator] [GN:lexA] [FN:negative regulation of the SOS regulon] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [NT:alternate gene name:dinR] [SP:P31080] [LE:135694] [RE:136311] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20423127_c3_991 441 4213 2676 891 2302 8.6e−239 Description pir:[LN:C69663] [AC:C69663] [PN:DNA mismatch repair (recognition) mutS] [GN:mutS] [CL:DNA mismatch repair protein mutS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185295:g2634076] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:mutS] [FN:DNA mismatch repair recognition] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [SP:P49849] [LE:176693] [RE:179269] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20485875_c3_1008 442 4214 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20501250_c2_922 443 4215 1029 342 551 3.0e−53 Description sp:[LN:TRPD_METJA] [AC:Q57686] [GN:TRPD:MJ0234] [OR:METHANOCOCCUS JANNASCHII] [EC:2.4.2.18] [DE:ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE,] [SP:Q57686] [DB:swissprot] >pir:[LN:C64329] [AC:C64329] [PN:anthranilate synthase, subunit II′] [CL:anthranilate phosphoribosyltransferase:trpD homology] [OR:Methanococcus jannaschii] [EC:4.1.3.27] [DB:pir2] [MP:FOR225111–2261212] >gp:[GI:g1590969] [LN:U67479] [AC:U67479:L77117] [PN:anthranilate synthase component II (trpD)] [GN:MJ0234] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii] section 21 of 150 of the complete genome.] [NT:similar to GB:M33814 SP:P20574 PID:151234 percent] [LE:3662] [RE:4672] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20504512_c2_864 444 4216 1758 585 808 1.8e−80 Description gp:[GI:g4981713] [LN:AE001773] [AC:AE001773:AE000512] [PN:2-oxoacid ferredoxin oxidoreductase, alpha] [GN:TM1164] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 85 of 136 of the complete genome.] [NT:similar to GB:AE000666 percent identity:68.99;] [LE:8189] [RE:9865] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_205327_c2_836 445 4217 1332 443 1679 8.9e−173 Description sp:[LN:GID_BACSU] [AC:P39815] [GN:GID] [OR:BACILLUS SUBTILIS] [DE:GID PROTEIN] [SP:P39815] [DB:swissprot] >pir:[LN:A69632] [AC:A69632:S61497] [PN:glucose-inhibited division protein gid] [GN:gid] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185204:g2633985] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:glucose-inhibited division protein] [GN:gid] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:alternate gene name:ylyC] [LE:86791] [RE:88098] [DI:direct] >gp:[GI:e332181:g2462971] [LN:BSYLQGCOD] [AC:AJ000975] [PN:Gid protein] [GN:gid] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ylqg to cody gene region.] [SP:P39815] [LE:5959] [RE:7266] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20745462_c1_767 446 4218 1257 418 862 3.4e−86 Description pir:[LN:B69888] [AC:B69888] [PN:GTP-binding protein proteinase modulator homolog ynbA] [GN:ynbA] [CL:GTP-binding protein hflX] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1750108] [LN:BSU66480] [AC:U66480] [PN:YnbA] [GN:ynbA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis SpoVK (spoVK), YnbA (ynbA), YnbB (ynbB), GlnR (glnR), glutamine synthetase (glnA), YnaA (ynaA), YnaB (ynaB), YnaC (ynaC), YnaD (ynaD), YnaE (ynaE), YnaF (ynaF), YnaG (ynaG), YnaH (ynaH), YnaI (ynaI), YnaJ (ynaJ), xylan beta-1,4-xylosidase (xynB), xylose repressor (xylR), xylose isomerase (xylA), xylulose kinase(xylB), YncB (yncB), YncC (yncC), YncD (yncD) and YncE (yncE) genes, complete cds.] [LE:1382] [RE:2386] [DI:direct] >gp:[GI:e1183402:g2634127] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ynbA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:similar to GTP-binding protein protease modulator] [LE:93433] [RE:94437] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20819512_f1_50 447 4219 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_20968788_f3_579 448 4220 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_21641877_f2_250 449 4221 954 317 687 1.2e−67 Description pir:[LN:E69419] [AC:E69419] [PN:phosphate ABC transporter, permease protein (pstA) homolog] [CL:phoW protein] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649217] [LN:AE001010] [AC:AE001010:AE000782] [PN:phosphate ABC transporter, permease protein] [GN:AF1358] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 97 of 172 of the complete genome.] [NT:similar to GB:L10328 SP:P07654 GB:K01992 GB:X02723] [LE:6184] [RE:7035] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_21751938_f3_601 450 4222 708 235 183 3.0e−14 Description gp:[GI:g2897104] [LN:AF020798] [AC:AF020798] [PN:putative host cell surface-exposed lipoprotein] [OR:Streptococcus thermophilus bacteriophage TP-J34] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage lysogeny module, integrasehomolog (int), putative host cell surface-exposed lipoprotein, putative metallo-proteinase, repressor, Cro-like regulatory protein, and P1-antirepressor homolog genes, complete cds.] [NT:orf142] [LE:3941] [RE:4369] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_21912535_f1_212 451 4223 420 139 75 0.018 Description pir:[LN:B21124] [AC:B21124] [PN:Bkm-like sex-determining region hypothetical protein CS314] [GN:Bkm] [OR:Drosophila melanogaster] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_2195265_f1_6 452 4224 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22304635_f1_113 453 4225 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22368803_c2_857 454 4226 2397 798 1659 1.2e−170 Description sp:[LN:SP3E_BACSU] [AC:P21458:P21459] [GN:SPOIIIE] [OR:BACILLUS SUBTILIS] [DE:STAGE III SPORULATION PROTEIN E] [SP:P21458:P21459] [DB:swissprot] >pir:[LN:S09411] [AC:S09411:A32269:B32269:F69712] [PN:DNA translocase spoIIIE] [GN:spoIIIE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185271:g2634052] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:DNA translocase] [GN:spoIIIE] [FN:required for chromosome partitioning through] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P21458] [LE:153248] [RE:155611] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22390917_f3_560 455 4227 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22444075_c3_959 456 4228 873 290 788 2.3e−78 Description gp:[GI:d1034831:g3767595] [LN:AB015195] [AC:AB015195] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:RN450) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus gene for LytN and Eprh, complete cds.] [NT:ORF4] [LE:3221] [RE:4024] [DI:direct] >gp:[GI:d1034831:g3767595] [LN:AB015195] [AC:AB015195] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:RN450) DNA] [DB:genpept] [DE:Staphylococcus aureus gene for LytN and Eprh, complete cds.] [NT:ORF4] [LE:3221] [RE:4024] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22453425_f1_196 457 4229 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22470463_c3_989 458 4230 810 269 881 3.3e−88 Description pir:[LN:G69884] [AC:G69884] [PN:conserved hypothetical protein ymdB] [GN:ymdB] [CL:hypothetical protein ymdB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185288:g2634069] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymdB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:169889] [RE:170683] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22539812_c1_768 459 4231 1254 417 1290 1.5e−131 Description pir:[LN:C69888] [AC:C69888] [PN:conserved hypothetical protein ynbB] [GN:ynbB] [CL:hypothetical protein ynbB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1750109] [LN:BSU6648O] [AC:U66480] [PN:YnbB] [GN:ynbB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis SpoVK (spoVK), YnbA (ynbA), YnbB (ynbB), GlnR (glnR), glutamine synthetase (glnA), YnaA (ynaA), YnaB (ynaB), YnaC (ynaC), YnaD (ynaD), YnaE (ynaE), YnaF (ynaF), YnaG (ynaG), YnaH (ynaH), YnaI (ynaI), YnaJ (ynaJ), xylan beta-1,4-xylosidase (xynB), xylose repressor (xylR), xylose isomerase (xylA), xylulose kinase(xylB), YncB (yncB), YncC (yncC), YncD (yncD) and YncE (yncE)genes, complete cds.] [LE:2574] [RE:3839] [DI:direct] >gp:[GI:e1183403:g2634128] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ynbB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:similar to hypothetical proteins] [LE:94625] [RE:95890] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22663932_f1_22 460 4232 972 323 1021 4.8e−103 Description gp:[GI:g3800826] [LN:AF076684] [AC:AF0766841 [PN:oligopeptide transporter putative membrane] [GN:opp-2C] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative membrane permease domain (opp-2B), oligopeptide transporter putative membrane permease domain (opp-2C), oligopeptide transporter putative ATPase domain (opp-2D), and oligopeptide transporter putative ATPase domain (opp-2F) genes, complete cds.] [LE:1152] [RE:1982] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_22850885_c1_752 461 4233 1596 531 1799 1.7e−185 Description pir:[LN:F69884] [AC:F69884] [PN:conserved hypothetical protein ymdA] [GN:ymdA] [CL:hypothetical protein ymdA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185287:g2634068] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymdA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:168258] [RE:169820] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23445463_c3_965 462 4234 801 266 1002 4.9e−101 Description pir:[LN:A69699] [AC:A69699:S09561] [PN:ribosomal protein S2 (rpsB):ribosomal protein BS1] [GN:rpsB] [CL:Escherichia coli ribosomal protein S2] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185240:g2634021] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ribosomal protein S2] [GN:rpsB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P21464] [LE:118905] [RE:119645] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23472175_c3_975 463 4235 417 138 360 5.3e−33 Description sp:[LN:RBFA_BACSU] [AC:P32731] [GN:RBFA] [OR:BACILLUS SUBTILIS] [DE:RIBOSOME-BINDING FACTOR A (P15B PROTEIN)] [SP:P32731] [DB:swissprot] >pir:[LN:G36905] [AC:G36905:G69689:S31996] [PN:ribosome-binding factor A rbfA] [GN:rbfA] [CL:Escherichia coli protein P15B] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g580902] [LN:BSORF1T7A] [AC:Z18631] [GN:ORF6] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis infB-nusA operon.] [SP:P32731] [LE:5131] [RE:5484] [DI:direct] >gp:[GI:e1185256:g2634037] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ribosome-binding factor A] [GN:rbfA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:ymxE, ylxO] [SP:P32731] [LE:137422] [RE:137775] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23491077_c1_824 464 4236 1266 421 1037 9.6e−105 Description sp:[LN:DCDA_BACSU] [AC:P23630] [GN:LYSA:LYS] [OR:BACILLUS SUBTILIS] [EC:4.1.1.20] [DE:DIAMINOPIMELATE DECARBOXYLASE, (DAP DECARBOXYLASE)] [SP:P23630] [DB:swissprot] >gp:[GI:d1013342:g1304007] [LN:BACJH642] [AC:D84432:D82370] [PN:LysA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:281375] [RE:282700] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23554760_f3_646 465 4237 255 84 64 0.0077 Description gp:[GI:g1123040] [LN:CELF44A2] [AC:U41993] [GN:F44A2.4] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain=Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F44A2.] [NT:similar to C4-type zinc finger and to C. elegans] [LE:11552:11678:12072:12484] [RE:11632:12022:12435:12848] [DI:direct Join] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23557807_f2_357 466 4238 534 177 506 1.8e−48 Description gp:[GI:e1172770:g2598550] [LN:LLAJ109] [AC:AJ000109] [PN:gluthatione peroxidase] [GN:gpo] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis carB and gpo genes.] [LE:163] [RE:636] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23597802_c2_942 467 4239 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23632758_c1_723 468 4240 258 85 79 0.037 Description gp:[GI:g882139] [LN:SCU17174] [AC:U17174] [PN:phase-2 flagellin structural protein] [GN:fljB] [OR:Salmonella choleraesuis] [DB:genpept-bct2] [DE:Salmonella choleraesuis ATCC 6967 phase-2 flagellin structural protein (fljB) gene, complete cds.] [LE:1] [RE:1521] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23633467_c2_851 469 4241 987 328 659 1.1e−64 Description pir:[LN:D69692] [AC:D69692] [PN:riboflavin kinase/FAD synthase ribC] [GN:ribC] [CL:conserved hypothetical protein HI0963] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e269877:g1592690] [LN:BSRIBRPS] [AC:Z80835] [PN:FMN adenylyltransferase] [GN:ribC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ribC, rpsO and pnpA genes.] [NT:riboflavin kinase] [SP:P54575] [LE:88] [RE:1038] [DI:direct] >gp:[GI:e1185258:g2634039] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:FAD synthase] [GN:ribC] [FN:riboflavin biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.26:2.7.7.2] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:riboflavin kinase] [SP:P54575] [LE:138805] [RE:139755] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23650250_c1_729 470 4242 546 181 667 1.6e−65 Description sp:[LN:HSLV_BACSU] [AC:P39070] [GN:HSLV:CLPQ:CODW] [OR:BACILLUS SUBTILIS] [EC:3.4.99.-] [DE:HEAT SHOCK PROTEIN HSLV PRECURSOR,] [SP:P39070] [DB:swissprot] >pir:[LN:S61494] [AC:S61494:S45024:C69601] [PN:20S proteasome beta-type chain clpQ:heat shock protein codW] [GN:clpQ:codW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g535349] [LN:BSU13634] [AC:U13634] [PN:CodW] [GN:codW] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis JH642 dipeptide permease operon regulators, codV, codW, codX, and codY genes, complete cds.] [LE:1220] [RE:1765] [DI:direct] >gp:[GI:e1185206:g2633987] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:beta-type subunit of the 20S proteasome] [GN:clpQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:alternate gene name:hslV, codW] [SP:P39070] [LE:89093] [RE:89638] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23650343_c2_949 471 4243 1167 388 527 1.1e−50 Description pir:[LN:G71097] [AC:G71097] [PN:probable amidohydrolase] [GN:PH1043] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031084:g3257458] [LN:AP000004] [AC:AP000004:AB009494:AB009495:AB009496:AB009497:AB009498:AB009499] [PN:387aa long hypothetical amidohydrolase] [GN:PH1043] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 777001–994000 nt. position(4/7).] [NT:similar to Swiss_Prot:P80092 percent identity:] [LE:172136] [RE:173299] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23671890_c1_807 472 4244 1287 428 918 3.9e−92 Description pir:[LN:A69730] [AC:A69730] [PN:UV-damage repair protein uvrX] [GN:uvrX] [CL:umuC protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183597:g2634570] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:UV-damage repair protein] [GN:uvrX] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [NT:alternate gene name:yolE] [LE:74108] [RE:75358] [DI:complement] >gp:[GI:g3025495] [LN:AF020713] [AC:AF020713] [PN:IMPB/MUCB/SAMB family protein] [GN:yolE] [OR:Bacteriophage SPBc2] [DB:genpept-phg] [DE:Bacteriophage SPBc2 complete genome.] [LE:14792] [RE:16042] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23673150_c3_1029 473 4245 1002 333 1329 1.1e−135 Description pir:[LN:C70015] [AC:C70015] [PN:GMP reductase, homolog yumD] [GN:yumD] [OR:Bacillus subtilis] [EC:1.6.6.8] [DB:pir2] >gp:[GI:e1184292:g2635710] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yumD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to GMP reductase] [LE:105099] [RE:106079] [DI:direct] >gp:[GI:e311468:g1934831] [LN:BSZ93939] [AC:Z93939] [PN:unknown] [GN:yumD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment from yumA to yulF.] [NT:potential inosine or guanosine 5′ monophosphate] [LE:3536] [RE:4516] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23725442_f2_230 474 4246 456 151 97 0.0028 Description gp:[GI:g3582212] [LN:AE001272] [AC:AE001272] [PN:Potential membrane spanning protein] [GN:ORF00031] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmid sequence.] [NT:similar to GB:Z30588 PID:459257 percent identity:] [LE:25025] [RE:25804] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23860952_f3_526 475 4247 516 171 453 7.4e−43 Description sp:[LN:PMSR_BACSU] [AC:P54154] [GN:YPPP] [OR:BACILLUS SUBTILIS] [DE:REDUCTASE)] [SP:P54154] [DB:swissprot] >pir:[LN:E69940] [AC:E69940] [PN:peptide methionine sulfoxide reductase homolog yppP] [GN:yppP] [CL:peptide methionine sulfoxide reductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256653] [LN:BACYACA] [AC:L77246] [PN:DNA-binding protein] [GN:yppP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:42.4% identity with the Lycopersicon esculentum] [LE:33389] [RE:33922] [DI:direct] >gp:[GI:e1183616:g2634589] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:yppP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [NT:similar to peptide methionine sulfoxide reductase] [SP:P54154] [LE:91230] [RE:91763] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23944052_c1_789 476 4248 378 125 248 1.7e−20 Description sp:[LN:CATB_BACFR] [AC:P45737] [GN:KATB] [OR:BACTEROIDES FRAGILIS] [EC:1.11.1.6] [DE:CATALASE,] [SP:P45737] [DB:swissprot] >pir:[LN:A57262] [AC:A57262] [PN:catalase,] [GN:katB] [CL:catalase] [OR:Bacteroides fragilis] [EC:1.11.1.6] [DB:pir2] >gp:[GI:g841192] [LN:BFU18676] [AC:U18676] [PN:catalase] [GN:katB] [FN:decomposes hydrogen peroxide in water and] [OR:Bacteroides fragilis] [DB:genpept-bct2] [EC:1.11.1.6] [DE:Bacteroides fragilis catalase (katB) gene, complete cds.] [LE:348] [RE:1808] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_23992812_c1_793 477 4249 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24017127_c1_769 478 4250 405 134 537 9.3e−52 Description gp:[GI:g468509] [LN:SAGLNAR] [AC:X76490] [PN:glutamine synthetase repressor] [GN:glnR] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus (bb270) glnA and glnR genes.] [LE:975] [RE:1343] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24033217_c2_850 479 4251 930 309 720 3.8e−71 Description sp:[LN:TRUB_BACSU] [AC:P32732] [GN:TRUB] [OR:BACILLUS SUBTILIS] [EC:4.2.1.70] [DE:HYDROLYASE)] [SP:P32732] [DB:swissprot] >pir:[LN:G69726] [AC:G69726:H36905:S31997] [PN:tRNA pseudouridine 5S synthase truB:P35 homolog] [GN:truB] [CL:Escherichia coli protein P35] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185257:g2634038] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:tRNA pseudouridine 55 synthase] [GN:truB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:alternate gene name:ylxN, ymxF] [SP:P32732] [LE:137857] [RE:138786] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24078753_c3_999 480 4252 450 149 295 4.1e−26 Description pir:[LN:G69657] [AC:G69657] [PN:tRNA isopentenylpyrophosphate transferase miaA] [GN:miaA] [CL:delta(2)-isopentenylpyrophosphate transferase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183392:g2634117] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:tRNA isopentenylpyrophosphate transferase] [GN:miaA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [LE:84430] [RE:85374] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24222137_f2_341 481 4253 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24225000_f3_475 482 4254 894 297 360 5.3e−33 Description gp:[GI:g2194195] [LN:SGU61158] [AC:U61158] [PN:GdmF] [GN:gdmF] [OR:Staphylococcus gallinarum] [DB:genpept-bct1] [DE:Staphylococcus gallinarum Tue3928 GdmF (gdmF), putative membrane protein (gdmH), ABC transporter (gdmT), and antibiotic gallidermin precursor (gdmA) genes, complete cds, putative membrane protein(gdmE) and modifying enzyme (gdmB) genes, partial cds.] [NT:proposed ABC transporter subunit (ATP-binding] [LE:179] [RE:874] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24225053_c3_1031 483 4255 318 105 202 2.9e−16 Description pir:[LN:E69894] [AC:E69894] [PN:hypothetical protein ynzC] [GN:ynzC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183447:g2634172] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ynzC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [LE:137514] [RE:137747] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24251466_c1_799 484 4256 2745 914 3437 0.0 Description sp:[LN:ACON_BACSU] [AC:P09339:Q45059] [GN:CITB] [OR:BACILLUS SUBTILIS] [EC:4.2.1.3] [DE:ACONITATE HYDRATASE, (CITRATE HYDRO-LYASE) (ACONITASE)] [SP:P09339:Q45059] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24257252_c1_727 485 4257 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24267941_c1_745 486 4258 726 241 304 4.5e−27 Description sp:[LN:YMFC_BACSU] [AC:O31761] [GN:YMFC] [OR:BACILLUS SUBTILIS] [DE:REGION] [SP:O31761] [DB:swissprot] >pir:[LN:B69885] [AC:B69885] [PN:transcription regulator GntR family homolog ymfC] [GN:ymfC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185272:g2634053] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymfC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to transcriptional regulator (GntR family)] [SP:O31761] [LE:155754] [RE:156479] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24267942_c1_823 487 4259 1089 362 300 1.2e−26 Description sp:[LN:ALR_BACSU] [AC:P10725:P96620] [GN:ALR:DAL] [OR:BACILLUS SUBTILIS] [EC:5.1.1.1] [DE:ALANINE RACEMASE,] [SP:P10725:P96620] [DB:swissprot] >gp:[GI:d1020054:g1881274] [LN:AB001488] [AC:AB001488] [PN:ALANINE RACEMASE] [GN:alr] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [EC:5.1.1.1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [LE:50435] [RE:51604] [DI:direct] >gp:[GI:e1182430:g2632764] [LN:BSUB0003] [AC:Z99106:AL009126] [PN:D-alanine racemase] [GN:dal] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:5.1.1.1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:alternate gene name:alr] [SP:P10725] [LE:114179] [RE:115348] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24275017_c2_856 488 4260 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24352200_f3_600 489 4261 1095 364 674 2.8e−66 Description pir:[LN:T02833] [AC:T02833] [PN:hypothetical protein L4171.5] [OR:Leishmania major] [DB:pir2] [MP:1] >gp:[GI:g2266911] [LN:AE001274] [AC:AE001274:AC003011:AC002552:U60409:AF008205:AC002134:AF008206:U7 0253] [PN:L4171.5] [GN:L4171.5] [OR:Leishmania major] [DB:genpept-inv2] [DE:Leishmania major chromosome 1, complete sequence.] [NT:similar to threonine aldolase; leucine zipper] [LE:124709] [RE:125788] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24407758_f3_696 490 4262 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24412811_c3_997 491 4263 957 318 147 4.4e−11 Description pir:[LN:T02661] [AC:T02661] [PN:lysophospholipase homolog] [GN:LPL1] [OR:Oryza sativa] [SR:, rice] [DB:pir2] >gp:[GI:g2801536] [LN:AF039531] [AC:AF039531] [PN:lysophospholipase homolog] [GN:LPL1] [OR:Oryza sativa] [DB:genpept-pln2] [DE:Oryza sativa lysophospholipase homolog (LPL1) mRNA, complete cds.] [LE:46] [RE:960] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24414187_c3_1003 492 4264 396 131 74 0.011 Description gp:[GI:g42727] [LN:ECRHAT] [AC:X60699] [GN:sodA] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E. coli rhaT gene for L-rhamnose permease, rhaC (3′ end) and sodA(5′ end) genes.] [SP:P00448] [LE:<1] [RE:288] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24414818_c1_738 493 4265 870 289 952 9.8e−96 Description gp:[GI:e1185251:g2634032] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:nusA] [FN:transcription termination] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [LE:133252] [RE:134367] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24415933_c3_1078 494 4266 153 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24417512_f3_505 495 4267 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24470927_f2_358 496 4268 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24475252_c3_1052 497 4269 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24484683_c3_1041 498 4270 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24492827_f1_223 499 4271 2601 866 1069 3.9e−108 Description pir.:[LN:G69801] [AC:G69801] [PN:hypothetical protein yfhO] [GN:yfhO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182850:g2633184] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:128691] [RE:131150] [DI:direct] >gp:[GI:d1025397:g2804545] [LN:D85082] [AC:D85082] [PN:YfhO] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:21582] [RE:24041] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24495928_c1_772 500 4272 210 69 70 0.028 Description pir:[LN:G69058] [AC:G69058] [PN:hypothetical protein MTH1440] [GN:MTH1440] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2622552] [LN:AE000905] [AC:AE000905:AE000666] [PN:unknown] [GN:MTH1440] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct2] [DE:Methanobacterium thermoautotrophicum from bases 1293944 to 1305586(section 111 of 148) of the complete genome.] [NT:Function Code:14.00- Unknown,; similar to,] [LE:7011] [RE:7214] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_2459667_c1_796 501 4273 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24631637_c3_1002 502 4274 708 235 236 7.3e−20 Description gp:[GI:g2444107] [LN:U88974] [AC:U88974] [PN:ORF28] [OR:Streptococcus thermophilus temperate bacteriophage O1205] [DB:genpept-phg] [DE:Streptococcus thermophilus temperate bacteriophage O1205, complete genome.] [LE:17062] [RE:17955] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24640925_c3_1037 503 4275 1272 423 1288 2.4e−131 Description sp:[LN:OPUD_BACSU] [AC:P54417] [GN:OPUD] [OR:BACILLUS SUBTILIS] [DE:GLYCINE BETAINE TRANSPORTER OPUD] [SP:P54417] [DB:swissprot] >pir:[LN:G69670] [AC:G69670] [PN:glycine betaine transporter opuD] [GN:opuD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185880:g2635491] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:glycine betaine transporter] [GN:opuD] [FN:osmoprotection] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:alternate gene name:ytfQ] [SP:P54417] [LE:78128] [RE:79666] [DI:direct] >gp:[GI:g2293330] [LN:AF008220] [AC:AF008220] [PN:putative transporter] [GN:opuD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:100760] [RE:102298] [DI:complement] >gp:[GI:g1524397] [LN:BSU50082] [AC:U50082] [PN:glycine betaine transporter OpuD] [GN:opuD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis glycine betaine transporter OpuD (opuD) gene, complete cds.] [LE:460] [RE:1998] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24647176_c2_928 504 4276 771 256 128 4.7e−06 Description gp:[GI:g4981173] [LN:AE001738] [AC:AE001738:AE000512] [PN:conserved hypothetical protein] [GN:TM0651] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 50 of 136 of the complete genome.] [NT:similar to PID:1653547 percent identity:52.43;] [LE:13445] [RE:14251] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24647182_c1_821 505 4277 729 242 232 3.9e−33 Description gp:[GI:g4982086] [LN:AE001799] [AC:AE001799:AE000512] [PN:dihydrodipicolinate reductase] [GN:TM1520] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 111 of 136 of the complete genome.] [NT:similar to PID:1185002 percent identity:62.67;] [LE:16971] [RE:17621] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24659382_c2_890 506 4278 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24666043_c1_803 507 4279 1233 410 866 1.3e−86 Description pir:[LN:D70006] [AC:D70006] [PN:conserved hypothetical protein yubA] [GN:yubA] [CL:Bacillus subtilis conserved hypothetical protein yueF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185989:g2635600] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:yubA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to hypothetical proteins] [LE:196858] [RE:198024] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24744010_c3_1028 508 4280 273 90 347 1.3e−31 Description pir:[LN:F69835] [AC:F69835] [PN:ribosomal protein S14 homolog yhzA] [GN:yhzA] [CL:Escherichia coli ribosomal protein S14] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182877:g2633211] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhzA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to ribosomal protein S14] [LE:162598] [RE:162867] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24792776_c2_846 509 4281 528 175 371 3.6e−34 Description sp:[LN:YLXS_BACSU] [AC:P32726] [GN:YLXS] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 17.6 KD PROTEIN IN NUSA 5′ REGION (P15A) (ORF1)] [SP:P32726] [DB:swissprot] >pir:[LN:B36905] [AC:B36905:E69882:S31990] [PN:conserved hypothetical protein ylxS] [GN:ylxS] [CL:nus operon 15K protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g49315] [LN:BSORF1T7A] [AC:Z18631] [GN:ORF1] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis infB-nusA operon.] [SP:P32726] [LE:456] [RE:926] [DI:direct] >gp:[GI:e1185250:g2634031] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylxS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:ymxA; similar to hypothetical] [SP:P32726] [LE:132747] [RE:133217] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24823377_f3_498 510 4282 912 303 462 8.2e−44 Description pir:[LN:E69840] [AC:E69840] [PN:hypothetical protein yitL] [GN:yitL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183105:g2633439] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yitL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [LE:181473] [RE:182369] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24877312_f1_105 511 4283 1392 463 1093 1.1e−110 Description pir:[LN:A69763] [AC:A69763] [PN:homoserine dehydrogenase homolog yclM] [GN:yclM] [CL:aspartate kinase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182346:g2632680] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:yclM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to homoserine dehydrogenase] [LE:27453] [RE:28817] [DI:complement] >gp:[GI:d1009646:g1805449] [LN:D50453] [AC:D50453] [PN:homologue of aspartokinase 2 alpha and beta] [GN:yclM] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:109856] [RE:111220] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24886550_c1_741 512 4284 288 95 350 6.1e−32 Description pir:[LN:F69700] [AC:F69700:S11365:S70690] [PN:ribosomal protein S15 (rpsO):ribosomal protein BS18] [GN:rpsO] [CL:Escherichia coli ribosomal protein S15:eubacterial ribosomal protein S15 homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e269878:g1592691] [LN:BSRIBRPS] [AC:Z80835] [PN:ribosomal protein S15] [GN:rpsO] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ribC, rpsO and pnpA genes.] [SP:P21473] [LE:1195] [RE:1464] [DI:direct] >gp:[GI:e1185259:g2634040] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ribosomal protein S15 (BS18)] [GN:rpsO] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P21473] [LE:139912] [RE:140181] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24886677_c3_971 513 4285 1722 573 1885 1.3e−194 Description pir:[LN:G69682] [AC:G69682] [PN:proline--tRNA ligase, proS:prolyl-tRNA synthetase] [GN:proS] [CL:proline--tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.15] [DB:pir2] >gp:[GI:e1185248:g2634029] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:prolyl-tRNA synthetase] [GN:proS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [LE:126301] [RE:127995] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_24900332_c2_870 514 4286 981 326 935 6.2e−94 Description sp:[LN:MUTL_BACSU] [AC:P49850] [GN:MUTL] [OR:BACILLUS SUBTILIS] [DE:DNA MISMATCH REPAIR PROTEIN MUTL] [SP:P49850] [DB:swissprot] >pir:[LN:A69663] [AC:A69663] [PN:DNA mismatch repair mutL] [GN:mutL] [CL:mismatch repair protein hexB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1002521] [LN:BSU27343] [AC:U27343] [PN:MutL] [GN:mutL] [FN:mismatch-repair recognition] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis spore coat protein (cotE) gene, partial cds, and mismatch repair recognition proteins (mutS) and (mutL) genes, complete cds.] [LE:2782] [RE:4665] [DI:direct] >gp:[GI:e1185296:g2634077] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:mutL] [FN:DNA mismatch repair] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P49850] [LE:179285] [RE:181168] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25445253_c3_1039 515 4287 495 164 336 1.8e−30 Description pir:[LN:F69891] [AC:F69891] [PN:conserved hypothetical protein yneP] [GN:yneP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e249652:g1405456] [LN:BC170DEGR] [AC:Z73234] [PN:YneP] [GN:yneP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [LE:12510] [RE:12875] [DI:direct] >gp:[GI:e1183462:g2634187] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:yneP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [NT:similar to hypothetical proteins] [LE:148889] [RE:149254] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25449061_c1_780 516 4288 249 82 191 4.3e−15 Description pir:[LN:D69901] [AC:D69901] [PN:two-component response regulator [YocF] homolog yocG] [GN:yocG] [CL:regulatory protein comA:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2619014] [LN:AF027868] [AC:AF027868] [PN:sensor regulator] [GN:yocG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosome region between terC and odhAB.] [NT:similar to B. subtilis Spo0A protein (267 aa)] [LE:71699] [RE:72298] [DI:direct] >gp:[GI:e1185392:g2634313] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yocG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [NT:similar to two-component response regulator [YocF] [LE:90790] [RE:91389] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25578140_f3_612 517 4289 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25587942_c3_956 518 4290 786 261 556 9.0e−54 Description pir:[LN:C69693] [AC:C69693] [PN:ribonuclease H rnh] [GN:rnh] [CL:ribonuclease HII] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185197:g2633978] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ribonuclease H] [GN:rnh] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.26.4] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [LE:78430] [RE:79197] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25593925_f1_166 519 4291 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25626625_c2_891 520 4292 636 211 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25664512_c2_915 521 4293 495 164 279 2.0e−24 Description pir:[LN:A69805] [AC:A69805] [PN:hypothetical protein yfiW] [GN:yfiW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182832:g2633166] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfiW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:113464] [RE:114240] [DI:direct] >gp:[GI:d1025379:g2804527] [LN:D85082] [AC:D85082] [PN:YfiW] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:6355] [RE:7131] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25665937_c3_968 522 4294 558 185 841 5.7e−84 Description sp:[LN:RRF_STAAU] [AC:O33276] [GN:FRR] [OR:STAPHYLOCOCCUS AUREUS] [DE:PROBABLE RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF)] [SP:O33276] [DB:swissprot] >gp:[GI:g2645713] [LN:AF033018] [AC:AF033018] [PN:ribosome recycling factor] [GN:frr] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus ribosome recycling factor (frr) gene, complete cds.] [LE:1] [RE:555] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_257837_c3_1013 523 4295 174 57 87 0.0045 Description gp:[GI:g2668605] [LN:AF015453] [AC:AF015453] [PN:unknown] [OR:Lactobacillus rhamnosus] [DB:genpept-bct2] [DE:Lactobacillus rhamnosus 6-phospho-beta-glucosidase homolog gene, partial cds; GNTR transcriptional regulator homolog and surface located protein genes, complete cds.] [NT:3.0E-ORF-1] [LE:2236] [RE:>3603] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_25977318_c3_1044 524 4296 2415 804 3470 0.0 Description sp:[LN:PARC_STAAU] [AC:P50073:P95682:P95683] [GN:PARC:GRLA] [OR:STAPHYLOCOCCUS AUREUS] [EC:5.99.1.-] [DE:TOPOISOMERASE IV SUBUNIT A,] [SP:P50073:P95682:P95683] [DB:swissprot] >gp:[GI:d1011747:g1777321] [LN:D67075] [AC:D67075] [PN:DNA topoisomerase IV GrlA subunit] [GN:grlA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (isolate:RN4220) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for DNA topoisomerase IV GrlB subunit, DNA topoisomerase IV GrlA subunit, complete cds.] [LE:2376] [RE:4778] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26205387_f2_331 525 4297 336 111 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26210925_c3_1032 526 4298 2028 675 2097 4.5e−217 Description sp:[LN:TKT_BACSU] [AC:P45694] [GN:TKT:TKTA] [OR:BACILLUS SUBTILIS] [EC:2.2.1.1] [DE:TRANSKETOLASE,] [SP:P45694] [DB:swissprot] >pir:[LN:G69723] [AC:G69723:S57401] [PN:transketolase, tkt] [GN:tkt] [CL:transketolase:thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [EC:2.2.1.1] [DB:pir2] >gp:[GI:e249642:g1405446] [LN:BC170DEGR] [AC:Z73234] [PN:transketolase] [GN:tktA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [SP:P45694] [LE:1537] [RE:3540] [DI:direct] >gp:[GI:e1183448:g2634173] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:transketolase] [GN:tkt] [FN:pentose phosphate] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.2.1.1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:alternate gene name:tktA] [SP:P45694] [LE:137916] [RE:139919] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26213890_c3_1026 527 4299 699 232 757 4.5e−75 Description gp:[GI:e313391:g2052219] [LN:SCDNACAT] [AC:X96981] [PN:catalase] [GN:catA] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:S. coelicolor catA gene.] [LE:392] [RE:1858] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26257806_c3_993 528 4300 984 327 707 9.0e−70 Description sp:[LN:MUTL_BACSU] [AC:P49850] [GN:MUTL] [OR:BACILLUS SUBTILIS] [DE:DNA MISMATCH REPAIR PROTEIN MUTL] [SP:P49850] [DB:swissprot] >pir:[LN:A69663] [AC:A69663] [PN:DNA mismatch repair mutL] [GN:mutL] [CL:mismatch repair protein hexB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1002521] [LN:BSU27343] [AC:U27343] [PN:MutL] [GN:mutL] [FN:mismatch-repair recognition] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis spore coat protein (cotE) gene, partial cds, and mismatch repair recognition proteins (mutS) and (mutL) genes, complete cds.] [LE:2782] [RE:4665] [DI:direct] >gp:[GI:e1185296:g2634077] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:mutL] [FN:DNA mismatch repair] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P49850] [LE:179285] [RE:181168] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26306257_c2_835 529 4301 2073 690 2490 1.0e−258 Description sp:[LN:TOP1_BACSU] [AC:P39814] [GN:TOPA:TOPI] [OR:BACILLUS SUBTILIS] [EC:5.99.1.2] [DE:(UNTWISTING ENZYME) (SWIVELASE)] [SP:P39814] [DB:swissprot] >pir:[LN:G69724] [AC:G69724] [PN:DNA topoisomerase I topA] [GN:topA] [CL:DNA topoisomerase I] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g520753] [LN:BACSMF] [AC:L27797] [PN:DNA topoisomerase I] [FN:DNA unwinding protein:removes negative] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 8G5) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis (smf) gene, 3′ end, DNA topisomase gene, complete cds, (gid) gene, 5′ end.] [LE:673] [RE:2748] [DI:direct] >gp:[GI:e1185203:g2633984] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:DNA topoisomerase I] [GN:topA] [FN:DNA unwinding protein removing negative] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:5.99.1.2] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:topI] [SP:P39814] [LE:84640] [RE:86715] [DI:direct] >gp:[GI:e332180:g2462970] [LN:BSYLQGCOD] [AC:AJ000975] [PN:DNA Topoisomerase I] [GN:topA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ylqg to codV gene region.] [SP:P39814] [LE:3808] [RE:5883] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26353417_c1_753 530 4302 294 97 141 8.5e−10 Description sp:[LN:YV12_CLOPE] [AC:Q46213] [OR:CLOSTRIDIUM PERFRINGENS] [DE:HYPOTHETICAL 10.7 KD PROTEIN IN VIRR 5′REGION (ORF2)] [SP:Q46213] [DB:swissprot] >pir:[LN:S49553] [AC:S49553] [PN:hypothetical protein 2] [OR:Clostridium perfringens] [DB:pir2] >gp:[GI:g498839] [LN:CPVIRRS] [AC:U04966] [FN:unknown] [OR:Clostridium perfringens] [DB:genpept-bct1] [DE:Clostridium perfringens JIR4025 extracellular toxin production regulatory locus ORF1 and ORF3 genes, partial cds, and ORF2, ORF10c, virR, virS, and ORF4 genes, complete cds.] [NT:ORF2] [LE:469] [RE:756] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26354837_c2_946 531 4303 900 299 570 2.9e−55 Description sp:[LN:DAPA_METJA] [AC:Q57695] [GN:DAPA:MJ0244] [OR:METHANOCOCCUS JANNASCHII] [EC:4.2.1.52] [DE:DIHYDRODIPICOLINATE SYNTHASE, (DHDPS)] [SP:Q57695] [DB:swissprot] >pir:[LN:E64330] [AC:E64330] [PN:dihydrodipicolinate synthase,] [OR:Methanococcus jannaschii] [EC:4.2.1.52] [DB:pir2] [MP:REV233451–232582] >gp:[GI:g1590977] [LN:U67480] [AC:U67480:L77117] [PN:dihydrodipicolinate synthase (dapA)] [GN:MJ0244] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 22 of 150 of the complete genome.] [NT:similar to GB:L08471 SP:Q04796 PID:142830] [LE:511] [RE:1380] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26369016_c1_773 532 4304 387 128 105 5.6e−06 Description gp:[GI:e139437:g1369938] [LN:BTP9011] [AC:X84706] [PN:scaffolding protein] [GN:b1 (sfp)] [OR:Bacteriophage B1] [DB:genpept-phg] [DE:Bacteriophage TP901-1 genomic region.] [NT:putative] [LE:<1] [RE:358] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26460951_c2_839 533 4305 792 263 917 5.0e−92 Description pir:[LN:F69708] [AC:F69708] [PN:uridylate kinase smbA] [GN:smbA] [CL:uridine 5′-monophosphate kinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185242:g2634023] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:uridylate kinase] [GN:smbA] [FN:pyrimidine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.4.-] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [LE:120774] [RE:121496] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26569432_f2_444 534 4306 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_26586537_f2_376 535 4307 156 51 70 0.028 Description gp:[GI:d1045213:g5106116] [LN:AP000064] [AC:AP000064] [PN:125aa long hypothetical protein] [GN:APE2412] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 7/7.] [LE:105148] [RE:105525] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_2734778_f1_31 536 4308 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_275427_c1_744 537 4309 1722 573 1379 5.5e−141 Description pir:[LN:H69884] [AC:H69884] [PN:conserved hypothetical protein ymfA] [GN:ymfA] [CL:conserved hypothetical protein MG139] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185269:g2634050] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymfA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:150509] [RE:152056] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_2931337_f2_256 538 4310 780 259 771 1.5e−76 Description gp:[GI:g3800827] [LN:AF076684] [AC:AF076684] [PN:oligopeptide transporter putative ATPase domain] [GN:opp-2D] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative membrane permease domain (opp-2B), oligopeptide transporter putative membrane permease domain (opp-2C), oligopeptide transporter putative ATPase domain (opp-2D), and oligopeptide transporter putative ATPase domain (opp-2F) genes, complete cds.] [LE:1966] [RE:27421 [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_29781968_c3_995 539 4311 855 284 825 2.8e−82 Description sp:[LN:GLPF_BACSU] [AC:P18156] [GN:GLPF] [OR:BACILLUS SUBTILIS] [DE:GLYCEROL UPTAKE FACILITATOR PROTEIN] [SP:P18156] [DB:swissprot] >pir:[LN:C47700] [AC:C47700:A45868:B69634:S18563] [PN:glycerol uptake facilitator glpF] [GN:glpF] [CL:glycerol facilitator protein] [OR:Bacillus subtilis] [DB:pir2] [MP:75 (degrees)] >gp:[GI:g142997] [LN:BACGLPPFK] [AC:M99611] [PN:glycerol uptake facilitator] [GN:glpF] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis antiterminator regulatory protein (glpP), glycerol uptake facilitator (glpF) genes, complete cds, glycerolkinase (glpK) gene, 5′ end.] [NT:putative] [LE:1085] [RE:1909] [DI:direct] >gp:[GI:e1182917:g2633251] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:glycerol uptake facilitator] [GN:glpF] [FN:glycerol utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [SP:P18156] [LE:199186] [RE:200010] [DI:direct] >gp:[GI:e1182929:g2633263] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:glycerol uptake facilitator] [GN:glpF] [FN:glycerol utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [SP:P18156] [LE:2506] [RE:3330] [DI:direct] >gp:[GI:e324940:g2226136] [LN:BSY14079] [AC:Y14079] [PN:putative glycerol uptake facilitator] [GN:glpF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees:glpPFKDoperon and downstream.] [NT:see EMBL M99611 and Swiss Prot P18156.] [SP:P18156] [LE:2154] [RE:2978] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_29886011_f2_248 540 4312 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_30355313_c1_779 541 4313 1113 370 382 2.5e−35 Description pir:[LN:C69901] [AC:C69901] [PN:probable two-component sensor histidine kinase yocF] [GN:yocF] [CL:probable Bacillus subtilis two-component sensor histidine kinase yocF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2619013] [LN:AF027868] [AC:AF027868] [PN:sensor kinase] [GN:yocF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosome region between terC and odhAB.] [NT:similar to B. subtilis DegS sensor kinase (385 aa)] [LE:70568] [RE:71680] [DI:direct] >gp:[GI:e1185391:g2634312] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yocF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [NT:similar to two-component sensor histidine kinase] [LE:89659] [RE:90771] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_30656317_c2_838 542 4314 822 273 858 8.9e−86 Description pir:[LN:S61496] [AC:S61496:H69601] [PN:transcription pleiotropic repressor codY] [GN:codY] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g535351] [LN:BSU13634] [AC:U13634] [PN:CodY] [GN:codY] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis JH642 dipeptide permease operon regulators, codV, codW, codX, and codY genes, complete cds.] [LE:3225] [RE:4004] [DI:direct] >gp:[GI:e1185208:g2633989] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:transcriptional regulator] [GN:codY] [FN:negative regulation of srfA and comK genes (in] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [SP:P39779] [LE:91098] [RE:91877] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_31275_c2_927 543 4315 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_31552_c1_755 544 4316 522 173 197 9.9e−16 Description gp:[GI:d1045212:g5106115] [LN:AP000064] [AC:AP000064] [PN:197aa long hypothetical protein] [GN:APE2411] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 7/7.] [NT:motif=G-protein coupled receptors signature] [LE:104943] [RE:105536] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_31697151_c2_826 545 4317 315 104 441 1.4e−41 Description sp:[LN:RL19_BACSU] [AC:O31742] [GN:RPLS] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L19] [SP:O31742] [DB:swissprot] >pir:[LN:E69696] [AC:E69696] [PN:ribosomal protein L19 rplS] [GN:rplS] [CL:Escherichia coli ribosomal protein L19] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185195:g2633976] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ribosomal protein L19] [GN:rplS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:O31742] [LE:77012] [RE:77368] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_31803760_f1_9 546 4318 153 50 43 0.031 Description gp:[GI:e1347527:g3877915] [LN:CEF58G1] [AC:Z81556] [GN:F58G1.9] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F58G1, complete sequence.] [NT:predicted using Genefinder] [LE:13299:13426:13549] [RE:13379:13500:13656] [DI:direct Join] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_31844658_c3_987 547 4319 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3235828_c1_798 548 4320 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3257827_c2_858 549 4321 705 234 356 1.4e−32 Description pir:[LN:H69885] [AC:H69885] [PN:3-oxoacyl-acyl-carrier protein reductase homolog ymfI] [GN:ymfI] [CL:short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185278:g2634059] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymfI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to 3-oxoacyl-acyl-carrier protein] [LE:160607] [RE:161335] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_32611557_c3_966 550 4322 294 97 316 2.4e−28 Description sp:[LN:EFTS_BACSU] [AC:P80700:O31748] [GN:TSF] [OR:BACILLUS SUBTILIS] [DE:ELONGATION FACTOR TS (EF-TS)] [SP:P80700:O31748] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_33283167_c3_983 551 4323 1338 445 967 2.5e−97 Description pir:[LN:G69885] [AC:G69885] [PN:processing proteinase homolog ymfH] [GN:ymfH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185277:g2634058] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymfH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to processing protease] [LE:159305] [RE:160552] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_33375260_f2_273 552 4324 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3394390_f1_48 553 4325 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_34070261_c3_1010 554 4326 900 299 386 9.3e−36 Description pir:[LN:A70039] [AC:A70039] [PN:ABC transporter (ATP-binding protein) homolog yvfR] [GN:yvfR] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186097:g2635922] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvfR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:97865] [RE:98770] [DI:complement] >gp:[GI:e313073:g1945718] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvfR] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:probable ABC transporter] [LE:82901] [RE:83806] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_34195135_c2_896 555 4327 1104 367 1236 7.8e−126 Description sp:[LN:THRC_BACSU] [AC:P04990] [GN:THRC] [OR:BACILLUS SUBTILIS] [EC:4.2.99.2] [DE:THREONINE SYNTHASE,] [SP:P04990] [DB:swissprot] >pir:[LN:A25364] [AC:A25364:B31973:A69723] [PN:threonine synthase, thrC] [GN:thrC] [CL:threonine dehydratase] [OR:Bacillus subtilis] [EC:4.2.99.2] [DB:pir2] >gp:[GI:g40211] [LN:BSTHRBC] [AC:X04603] [PN:threonine synthase] [GN:thrC] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.2.99.2] [DE:B. subtilis thrB and thrC genes for homoserine kinase and threoninesynthase (EC 2.7.1.39 and EC 4.2.99.2, respectively).] [SP:P04990] [LE:248] [RE:1306] [DI:direct] >gp:[GI:e1184304:g2635722] [LN:BSUB0017] [AC:Z99120:AL009126] [PN:threonine synthase] [GN:thrC] [FN:threonine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.2.99.2] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:alternate gene name: thrB] [SP:P04990] [LE:115828] [RE:116886] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_34257817_c3_1038 556 4328 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_34571877_c1_746 557 4329 1275 424 484 3.8e−46 Description gp:[GI:g3426364] [LN:AF082738] [AC:AF082738] [PN:unknown] [OR:Streptococcus pyogenes] [DB:genpept-bct2] [DE:Streptococcus pyogenes phosphotidylglycerophosphate synthase (pgsA) and ABC transporter ATP-binding protein (stpA) genes, complete cds; and unknown genes.] [NT:orf1] [LE:1] [RE:1245] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_34663177_c2_860 558 4330 1167 388 641 2.1e−65 Description gp:[GI:g1842440] [LN:BSU87792] [AC:U87792] [PN:CinA] [GN:cinA] [FN:putative competence-damage inducible function] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis tRNA-Ala, phosphatidylglycerophosphate synthase(pgsA) and CinA (cinA) genes, complete cds, and RecA (recA) gene, partial cds.] [LE:6007] [RE:7258] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_35187587_c3_1055 559 4331 588 195 370 4.6e−34 Description pir:[LN:S34747] [AC:S34747] [PN:anthranilate synthase, component II] [CL:glutamine amidotransferase:trpG homology] [OR:Thermotoga maritima] [EC:4.1.3.27] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_35370318_c2_834 560 4332 930 309 1274 7.4e−130 Description pir:[LN:F69719] [AC:F69719] [PN:succinate--CoA ligase (ADP-forming), alpha chain] [GN:sucD] [CL:succinate--CoA ligase (ADP-forming) alpha chain] [OR:Bacillus subtilis] [EC:6.2.1.5] [DB:pir2] >gp:[GI:e1185201:g2633982] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:succinyl-CoA synthetase (alpha subunit)] [GN:sucD] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.2.1.5] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P80865] [LE:82596] [RE:83498] [DI:direct] >gp:[GI:e332178:g2462968] [LN:BSYLQGCOD] [AC:AJ000975] [PN:putative succinyl-coA synthetase alpha chain] [GN:sucD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ylqg to codV gene region.] [SP:P80865] [LE:1764] [RE:2666] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_35557787_c3_1073 561 4333 1275 424 842 4.4e−84 Description gp:[GI:g4982084] [LN:AE001799] [AC:AE001799:AE000512] [PN:aspartokinase II] [GN:TM1518] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 111 of 136 of the complete genome.] [NT:similar to PID:928811 SP:P53553 percent identity:] [LE:15047] [RE:16252] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_36134401_c2_897 562 4334 831 276 315 3.1e−28 Description sp:[LN:YXEH_BACSU] [AC:P54947] [GN:YXEH:IP1B] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 30.2 KD PROTEIN IN IDH-DEOR INTERGENIC REGION] [SP:P54947] [DB:swissprot] >pir:[LN:B70075] [AC:B70075] [PN:conserved hypothetical protein yxeH] [GN:yxeH] [CL:Methanobacterium thermoautotrophicum conserved hypothetical protein MTH1071] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184680:g2636501] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxeH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21):from 3999281 to 4214814.] [NT:similar to hypothetical proteins] [SP:P54947] [LE:63194] [RE:64006] [DI:complement] >gp:[GI:d1008920:g14084933] [LN:D45912] [AC:D45912] [GN:yxeH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (Marburg 168; trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence between the iol and hut operon, partial and complete cds.] [NT:homologous to SwissProt:YIDA_ECOLI hypothetical] [LE:7470] [RE:8282] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_36142827_c1_814 563 4335 1812 603 780 1.6e−77 Description gp:[GI:d1014255:g1651216] [LN:D88209] [AC:D88209] [PN:Pz-peptidase] [OR:Bacillus licheniformis] [SR:Bacillus licheniformis (strain:N22) DNA] [DB:genpept-bct1] [DE:Bacillus licheniformis DNA for Pz-peptidase, complete cds.] [LE:238] [RE:2124] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_36220061_c3_964 564 4336 1425 474 1399 4.2e−143 Description Sp:[LN:HSLU_BACSU] [AC:P39778] [GN:HSLU:CLPY:CODX] [OR:BACILLUS SUBTILIS] [DE:HEAT SHOCK PROTEIN HSLU] [SP:P39778] [DB:swissprot] >pir:[LN:E69601] [AC:E69601:S61495:S72310] [PN:ATP-dependent Clp proteinase-like protein clpY:codX protein] [GN:clpY:codX] [CL:heat shock protein hslU:FtsH/SEC18/CDC48-type ATP-binding domain homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g535350] [LN:BSU13634] [AC:U13634] [PN:CodX] [GN:codX] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis JH642 dipeptide permease operon regulators, codV, codW, codX, and codY genes, complete cds.] [LE:1782] [RE:3185] [DI:direct] >gp:[GI:e1185207:g2633988] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ATP-dependent Clp protease-like] [GN:clpY] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:hslU, codX] [SP:P39778] [LE:89655] [RE:91058] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_36225938_c2_833 565 4337 1185 394 1557 7.6e−160 Description sp:[LN:SUCC_BACSU] [AC:P80886] [GN:SUCC] [OR:BACILLUS SUBTILIS] [EC:6.2.1.5] [DE:(VEGETATIVE PROTEIN 63) (VEG63)] [SP:P80886] [DB:swissprot] >pir:[LN:E69719] [AC:E69719] [PN:succinate--CoA ligase (ADP-forming), beta chain] [GN:sucC] [CL:succinate--CoA ligase (ADP-forming) beta chain] [OR:Bacillus subtilis] [EC:6.2.1.5] [DB:pir2] >gp:[GI:e1185200:g2633981] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:succinyl-CoA synthetase (beta subunit)] [GN:sucC] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.2.1.5] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P80886] [LE:81410] [RE:82567] [DI:direct] >gp:[GI:e332177:g2462967] [LN:BSYLQGCOD] [AC:AJ000975] [PN:putative succinyl-coA synthetase beta chain] [GN:sucC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ylqg to codV gene region.] [SP:P80886] [LE:578] [RE:1735] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3913307_f3_640 566 4338 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3928177_f2_255 567 4339 360 119 91 0.00081 Description gp:[GI:d1039115:g4514335] [LN:AB013370] [AC:AB013370] [PN:YndE] [GN:yndE] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 yndF, gerKA, yndF1 and yndF2 genes, partial and complete cds.] [LE:1025] [RE:1876] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3937551_c1_820 568 4340 999 332 803 6.0e−80 Description pir:[LN:B70461] [AC:B70461] [PN:aspartate-semialdehyde dehydrogenase,] [GN:asd] [CL:aspartate-semialdehyde dehydrogenase] [OR:Aquifex aeolicus] [EC:1.2.1.11] [DB:pir2] >gp:[GI:g2984139] [LN:AE000760] [AC:AE000760:AE000657] [PN:aspartate-semialdehyde dehydrogenase] [GN:asd] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 92 of 109 of the complete genome.] [LE:7783] [RE:8805] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_3961702_c1_811 569 4341 1269 422 2249 3.5e−233 Description pir:[LN:JC5325] [AC:JC5325:PC4317] [PN:methicillin resistance factor FEMA] [GN:femA] [CL:methicillin resistance factor femA] [OR:Staphylococcus epidermidis] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4025303_c2_923 570 4342 792 263 450 1.5e−42 Description sp:[LN:TRPC_LACLA] [AC:Q01999] [GN:TRPC] [OR:LACTOCOCCUS LACTIS] [SR:, SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.1.1.48] [DE:INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE, (IGPS)] [SP:Q01999] [DB:swissprot] >pir:[LN:S35127] [AC:S35127] [PN:indole-3-glycerol-phosphate synthase,] [GN:trpC] [CL:indole-3-glycerol-phosphate synthase:trpC homology] [OR:Lactococcus lactis subsp. lactis] [EC:4.1.1.48] [DB:pir2] >gp:[GI:g149519] [LN:LACTRPOP] [AC:M87483] [PN:indoleglycerol phosphate synthase] [GN:trpC] [OR:Lactococcus lactis] [SR:Lactococcus lactis (strain IL1403, sub_species lactis) DNA] [DB:genpept-bct1] [EC:4.1.1.48] [DE:L. lactis trpE, trpG, trpD, trpF, trpC, trpB trpA genes, complete cds.] [LE:4089] [RE:4883] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4062762_f3_555 571 4343 405 134 508 1.1e−48 Description gp:[GI:g3135292] [LN:AF029731] [AC:AF029731] [PN:large conductance mechanosensitive channel] [GN:mscL] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus large conductance mechanosensitive channel(mscL) gene, complete cds.] [NT:MscL] [LE:49] [RE:411] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4063802_c1_808 572 4344 1497 498 808 1.8e−80 Description sp:[LN:TRPE_LACLA] [AC:Q02001] [GN:TRPE] [OR:LACTOCOCCUS LACTIS] [SR:, SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.1.3.27] [DE:ANTHRANILATE SYNTHASE COMPONENT I,] [SP:Q02001] [DB:swissprot] >pir:[LN:S35124] [AC:S35124] [PN:anthranilate synthase, alpha chain] [GN:trpE] [CL:anthranilate synthase component I] [OR:Lactococcus lactis subsp. lactis] [EC:4.1.3.27] [DB:pir2] >gp:[GI:g149516] [LN:LACTRPOP] [AC:M87483] [PN:anthranilate synthase alpha subunit] [GN:trpE] [OR:Lactococcus lactis] [SR:Lactococcus lactis (strain IL1403, sub_species lactis) DNA] [DB:genpept-bct1] [EC:4.1.3.27] [DE:L. lactis trpE, trpG, trpD, trpF, trpC, trpB trpA genes, complete cds.] [LE:954] [RE:2324] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_40686_c1_737 573 4345 4089 1362 6425 0.0 Description sp:[LN:DPO3_STAAU] [AC:Q53665:Q57110] [GN:POLC] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.7.7] [DE:DNA POLYMERASE III, ALPHA CHAIN POLC-TYPE, (POLIII)] [SP:Q53665:Q57110] [DB:swissprot] >gp:[GI:d1013849:g1483182] [LN:D86727] [AC:D86727:D45368] [PN:DNA polymerase III] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:IP8) DNA, clone:pBpolC] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for DNA polymerase III, complete cds.] [LE:34] [RE:4341] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4069675_f2_274 574 4346 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4080342_c3_996 575 4347 1515 504 1998 1.4e−206 Description sp:[LN:GLPK_BACSU] [AC:P18157] [GN:GLPK] [OR:BACILLUS SUBTILIS] [EC:2.7.1.30] [DE:(GLYCEROKINASE) (GK)] [SP:P18157] [DB:swissprot] >pir:[LN:B45868] [AC:B45868:D47700:C69634:S18564] [PN:glycerol kinase, glpK] [GN:glpK] [CL:xylulokinase] [OR:Bacillus subtilis] [EC:2.7.1.30] [DB:pir2] [MP:75 (degrees)] >gp:[GI:g142992] [LN:BACGLPKD] [AC:M34393] [OR:Bacillus subtilis] [SR:B. subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:B. subtilis glycerol kinase (glpK) and glycerol-3-phosphatedehydrogenase (glpD) genes, complete cds.] [NT:glycerol kinase (glpK) (EC:2.7.1.30)] [LE:698] [RE:2188] [DI:direct] >gp:[GI:e1182918:g2633252] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:glycerol kinase] [GN:glpK] [FN:glycerol utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.30] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [SP:P18157] [LE:200029] [RE:201519] [DI:direct] >gp:[GI:e1182930:g2633264] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:glycerol kinase] [GN:glpK] [FN:glycerol utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.30] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [SP:P18157] [LE:3349] [RE:4839] [DI:direct] >gp:[GI:e324941:g2226137] [LN:BSY14079] [AC:Y14079] [PN:glycerol kinase] [GN:glpK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees:glpPFKDoperon and downstream.] [NT:see EMBL M34393 and Swiss Prot P18157.] [SP:P18157] [LE:2997] [RE:4487] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4089062_c2_906 576 4348 1176 391 380 4.0e−35 Description pir:[LN:C71302] [AC:C71302] [PN:probable exonuclease] [GN:TP0626] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322921] [LN:AE001237] [AC:AE001237:AE000520] [PN:exonuclease, putative] [GN:TP0626] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 53 of 87 of the complete genome.] [NT:similar to SP:P23479 percent identity:32.68;] [LE:11246] [RE:12421] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4093818_c2_859 577 4349 591 196 436 4.7e−41 Description sp:[LN:PGSA_BACSU] [AC:P46322] [GN:PGSA] [OR:BACILLUS SUBTILIS] [EC:2.7.8.5] [DE:(EC 2.7.8.5) (PHOSPHATIDYLGLYCEROPHOSPHATE SYNTHASE) (PGP SYNTHASE)] [SP:P46322] [DB:swissprot] >gp:[GI:d1009402:g893358] [LN:BACPGS1A] [AC:D50064] [PN:PgsA] [GN:pgs1A] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:Marburg168) DNA] [DB:genpept-bct1] [EC:2.7.8.5] [DE:Bacillus subtilis pgs1A gene for phosphatidylglycerophosphatesynthase, complete cds.] [LE:182] [RE:763] [DI:direct] >gp:[GI:g1842439] [LN:BSU87792] [AC:U87792] [PN:phosphatidylglycerophosphate synthase] [GN:pgsA] [FN:involved in the synthetic pathway for acidic] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis tRNA-Ala, phosphatidylglycerophosphate synthase(pgsA) and CinA (cinA) genes, complete cds, and RecA (recA) gene, partial cds.] [NT:PgsA] [LE:5407] [RE:5990] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4095286_c2_869 578 4350 375 124 246 6.4e−21 Description pir:[LN:C69884] [AC:C69884] [PN:conserved hypothetical protein ymcA] [GN:ymcA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185293:g2634074] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ymcA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:175322] [RE:175753] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4334383_f2_322 579 4351 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4336536_c1_739 580 4352 315 104 211 3.3e−17 Description sp:[LN:YLXR_BACSU] [AC:P32728] [GN:YLXR] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 10.4 KD PROTEIN IN NUSA-INFB INTERGENIC REGION (ORF3)] [SP:P32728] [DB:swissprot] >pir:[LN:D36905] [AC:D36905:D69882:S31992] [PN:conserved hypothetical protein ylxR:hypothetical protein 1 (nusA 3′ region)] [GN:ylxR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g580900] [LN:BSORF1T7A] [AC:Z18631] [GN:ORF3] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis infB-nusA operon.] [SP:P32728] [LE:2090] [RE:2365] [DI:direct] >gp:[GI:e1185252:g2634033] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylxR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:alternate gene name:ymxB; similar to hypothetical] [SP:P32728] [LE:134381] [RE:134656] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4414675_c1_783 581 4353 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4425068_f2_474 582 4354 2613 870 880 4.2e−88 Description pir:[LN:G69801] [AC:G69801] [PN:hypothetical protein yfhO] [GN:yfhO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182850:g2633184] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:128691] [RE:131150] [DI:direct] >gp:[GI:d1025397:g2804545] [LN:D85082] [AC:D85082] [PN:YfhO] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:21582] [RE:24041] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4460063_f1_150 583 4355 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_447326_c2_871 584 4356 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4493778_c3_952 585 4357 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4572162_c3_970 586 4358 1290 429 932 1.3e−93 Description pir:[LN:C69881] [AC:C69881] [PN:conserved hypothetical protein yluC] [GN:yluC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185247:g2634028] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yluC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:125000] [RE:126268] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4687825_c3_955 587 4359 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4719011_c2_841 588 4360 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4740932_c1_825 589 4361 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4798453_c1_790 590 4362 1026 341 242 2.7e−27 Description pir:[LN:H69873] [AC:H69873] [PN:conserved hypothetical protein ylbC] [GN:ylbC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334771:g2339999] [LN:BS16823KB] [AC:Z98682] [PN:YlbC protein] [GN:ylbC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:11510] [RE:12550] [DI:direct] >gp:[GI:e1185086:g2633867] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins from B. subtilis] [LE:170993] [RE:172033] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4884675_c3_1057 591 4363 1212 403 1268 3.2e−129 Description sp:[LN:TRPB_LACLA] [AC:Q01998] [GN:TRPB] [OR:LACTOCOCCUS LACTIS] [SR:, SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.2.1.20] [DE:TRYPTOPHAN SYNTHASE BETA CHAIN,] [SP:Q01998] [DB:swissprot] >pir:[LN:S35129] [AC:S35129] [PN:tryptophan synthase, beta chain] [GN:trpB] [CL:tryptophan synthase beta chain:tryptophan synthase beta chain homology] [OR:Lactococcus lactis subsp. lactis] [EC:4.2.1.20] [DB:pir2] >gp:[GI:g149521] [LN:LACTRPOP] [AC:M87483] [PN:tryptophan synthase beta subunit] [GN:trpB] [OR:Lactococcus lactis] [SR:Lactococcus lactis (strain IL1403, sub_species lactis) DNA] [DB:genpept-bct1] [EC:4.2.1.20] [DE:L. lactis trpE, trpG, trpD, trpF, trpC, trpB trpA genes, complete cds.] [LE:6514] [RE:7722] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4890802_f2_275 592 4364 1152 383 819 1.2e−81 Description sp:[LN:TYRA_BACSU] [AC:P20692] [GN:TYRA] [OR:BACILLUS SUBTILIS] [EC:1.3.1.12] [DE:PREPHENATE DEHYDROGENASE, (PDH)] [SP:P20692] [DB swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4891577_c2_879 593 4365 582 193 453 7.4e−43 Description pir:[LN:G69657] [AC:G69657] [PN:tRNA isopentenylpyrophosphate transferase miaA] [GN:miaA] [CL:delta(2)-isopentenylpyrophosphate transferase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183392:g2634117] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:tRNA isopentenylpyrophosphate transferase] [GN:miaA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [LE:84430] [RE:85374] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4942202_c3_1058 594 4366 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_4964686_f3_520 595 4367 204 67 195 1.6e−15 Description pir:[LN:C70057] [AC:C70057] [PN:4-oxalocrotonate tautomerase homolog ywhB] [GN:ywhB] [CL:4-oxalocrotonate tautomerase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e267624:g1565237] [LN:BSTHRZ] [AC:Z80360] [PN:Unknown, highly similar to Pseudomonas putida] [GN:ywhB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis thrZ downstream chromosomal region.] [LE:2388] [RE:2576] [DI:complement] >gp:[GI:e1186254:g2636290] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywhB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:similar to 4-oxalocrotonate tautomerase] [LE:54138] [RE:54326] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5109378_f3_546 596 4368 615 204 469 1.5e−44 Description pir:[LN:A69892] [AC:A69892] [PN:conserved hypothetical protein yneS] [GN:yneS] [CL:Escherichia coli ygiH protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e249655:g1405459] [LN:BC170DEGR] [AC:Z73234] [PN:YneS] [GN:yneS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [NT:similar to hypothetical protein MG247 from] [LE:13596] [RE:14177] [DI:complement] >gp:[GI:e1183465:g2634190] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:yneS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:similar to hypothetical proteins] [LE:149975] [RE:150556] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5109625_c3_1011 597 4369 372 123 258 3.4e−22 Description pir:[LN:D70039] [AC:D70039] [PN:two-component response regulator [YvfT] homolog yvfU] [GN:yvfU] [CL:regulatory protein comA:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186094:g2635919] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvfU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to two-component response regulator [YvfT] [LE:95389] [RE:95991] [DI:complement] >gp:[GI:e313075:g1945721] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvfU] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:probable two component regulatory system:] [LE:85680] [RE:86282] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5120635_c2_903 598 4370 240 79 76 0.026 Description sp:[LN:F801_SCHMA] [AC:P16463] [OR:SCHISTOSOMA MANSONI] [SR:, BLOOD FLUKE] [DE:FEMALE SPECIFIC 800 PROTEIN (FS800)] [SP:P16463] [DB:swissprot] >gp:[GI:g160990] [LN:SCMFS800] [AC:J03999] [PN:female-specific 800 protein] [GN:fs800] [OR:Schistosoma mansoni] [SR:Schistosoma mansoni (strain Puerto Rican) cDNA to mRNA] [DB:genpept-inv1] [DE:Schistosoma mansoni female-specific 800 protein (fs800) mRNA, complete cds.] [NT:putative] [LE:4] [RE:720] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5195328_c1_749 599 4371 393 130 142 2.3e−09 Description gp:[GI:g1842438] [LN:BSU87792] [AC:U87792] [PN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis tRNA-Ala, phosphatidylglycerophosphate synthase(pgsA) and CinA (cinA) genes, complete cds, and RecA (recA) gene, partial cds.] [NT:ORF307; hypothetical 34.7 kd protein] [LE:4436] [RE:5359] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5198557_c1_734 600 4372 801 266 847 1.3e−84 Description gp:[GI:d1032955:g3358087] [LN:AB004319] [AC:AB004319] [PN:undecaprenyl diphosphate synthase] [GN:upps] [OR:Micrococcus luteus] [SR:Micrococcus luteus (strain:B-P 26) DNA] [DB:genpept-bct1] [DE:Micrococcus luteus DNA for undecaprenyl diphosphate synthase, complete cds.] [LE:1] [RE:750] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5212776_c2_832 601 4373 867 288 839 9.2e−84 Description pir:[LN:F69880] [AC:F69880] [PN:conserved hypothetical protein ylqF] [GN:ylqF] [CL:conserved hypothetical protein MG442] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185196:g2633977] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylqF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:77511] [RE:78359] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_5355012_c1_770 602 4374 1359 452 2274 7.9e−236 Description sp:[LN:GLNA_STAAU] [AC:Q59812] [GN:GLNA] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.3.1.2] [DE:GLUTAMINE SYNTHETASE, (GLUTAMATE--AMMONIA LIGASE) (GS)] [SP:Q59812] [DB:swissprot] >gp:[GI:e214721:g1134886] [LN:SAGLNAR] [AC:X76490] [PN:glutamine synthetase] [GN:glnA] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus (bb270) glnA and glnR genes.] [SP:Q59812] [LE:1362] [RE:2702] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_553455_f3_540 603 4375 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6258588_c1_802 604 4376 1470 489 1305 3.8e−133 Description sp:[LN:ALST_BACSU] [AC:Q45068] [GN:ALST] [OR:BACILLUS SUBTILIS] [DE:AMINO ACID CARRIER PROTEIN ALST] [SP:Q45068] [DB:swissprot] >pir:[LN:A69585] [AC:A69585] [PN:amino acid carrier protein alsT] [GN:alsT] [CL:sodium-dependent D-alanine/glycine transport protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e249660:g1405464] [LN:BC170DEGR] [AC:Z73234] [PN:AlsT] [GN:alsT] [FN:amino acid carrier protein] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis DNA (26.2 kb fragment; 170 degree region).] [NT:similar to sodium/proton dependent alanine carrier] [SP:Q45068] [LE:20601] [RE:21998] [DI:direct] >gp:[GI:e1183470:g2634195] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:amino acid carrier protein] [GN:alsT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [SP:Q45068] [LE:156980] [RE:158377] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6416566_c1_800 605 4377 2031 676 3180 0.0 Description sp:[LN:PARE_STAAU] [AC:P50072] [GN:PARE:GRLB] [OR:STAPHYLOCOCCUS AUREUS] [EC:5.99.1.-] [DE:TOPOISOMERASE IV SUBUNIT B,] [SP:P50072] [DB:swissprot] >pir:[LN:S54426] [AC:S54426] [PN:DNA topoisomerase (ATP-hydrolyzing), chain B] [CL:DNA topoisomerase (ATP-hydrolyzing) chain B] [OR:Staphylococcus aureus] [EC:5.99.1.3] [DB:pir2] >gp:[GI:d1011746:g1777320] [LN:D67075] [AC:D67075] [PN:DNA topoisomerase IV GrlB subunit] [GN:grlB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (isolate:RN4220) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for DNA topoisomerase IV GrlB subunit, DNA topoisomerase IV GrlA subunit, complete cds.] [LE:385] [RE:2376] [DI:direct] >gp:[GI:g561879] [LN:STAGYRASL] [AC:L25288] [PN:gyrase-like protein beta subunit] [GN:grlB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (tissue library:FDA 574) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus gyrase-like protein alpha and beta subunit(grlA and grlB) genes, complete cds.] [LE:41] [RE:2032] [DI:direct] >gp:[GI:e306312:g2302281] [LN:A48501] [AC:A48501] [OR:Staphylococcus aureus] [DB:genpept-pat] [DE:Sequence 3 from Patent W09603516.] [NT:unnamed protein product] [LE:1] [RE:1992] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6525_f3_577 606 4378 1035 344 729 4.2e−72 Description sp:[LN:LYSP_ECOLI] [AC:P25737] [GN:LYSP:CADR] [OR:ESCHERICHIA COLI] [DE:LYSINE-SPECIFIC PERMEASE] [SP:P25737] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6641963_c3_1009 607 4379 1485 494 1302 8.0e−133 Description sp:[LN:YWNE_BACSU] [AC:P71040] [GN:YWNE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 55.8 KD PROTEIN IN SPOIIQ-MTA INTERGENIC REGION] [SP:P71040] [DB:swissprot] >pir:[LN:G70063] [AC:G70063] [PN:cardiolipin synthase homolog ywnE] [GN:ywnE] [CL:Bacillus probable cardiolipin synthetase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184565:g2636184] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywnE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to cardiolipin synthase] [SP:P71040] [LE:164628] [RE:166076] [DI:direct] >gp:[GI:e269549:g1592701] [LN:BSUEROP] [AC:Y08559] [PN:Unknown] [GN:ywnE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis urease operon and downstream DNA.] [NT:Product similar to Escherichia coli cardiolipin] [SP:P71040] [LE:5155] [RE:6603] [DI:complement] >gp:[GI:e1184565:g2636184] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywnE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to cardiolipin synthase] [SP:P71040] [LE:164628] [RE:166076] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6664127_c2_940 608 4380 438 145 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6678140_c3_972 609 4381 348 115 328 3.8e−28 Description pir:[LN:S52267] [AC:S52267] [PN:DNA polymerase III] [CL:DNA-directed DNA polymerase III alpha chain polC] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g642270] [LN:SADNAPOL3] [AC:Z48003:L39156] [PN:DNA polymerase III] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus gene for DNA polymerase III.] [SP:Q53665] [LE:34] [RE:4281] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6688126_c1_751 610 4382 1074 357 1661 7.2e−171 Description sp:[LN:RECA_STAAU] [AC:Q02350] [GN:RECA] [OR:STAPHYLOCOCCUS AUREUS] [DE:RECA PROTEIN] [SP:Q02350] [DB:swissprot] >gp:[GI:g463285] [LN:STARECAA] [AC:L25893] [GN:recA] [FN:genetic recombination] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus recA gene, complete cds.] [NT:putative] [LE:16] [RE:1059] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_673437_f3_529 611 4383 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6818827_c3_1072 612 4384 1608 535 2088 4.1e−216 Description pir:[LN:E69861] [AC:E69861] [PN:ABC transporter (ATP-binding protein) homolog ykpA] [GN:ykpA] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185033:g2633814] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykpA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:116988] [RE:118610] [DI:direct] >gp:[GI:g3282128] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:YkpA] [GN:ykpA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to E. coli hypothetical ABC transporter] [LE:17476] [RE:19098] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6837812_c1_735 613 4385 786 261 611 1.3e−59 Description sp:[LN:CDSA_BACSU] [AC:O31752] [GN:CDSA] [OR:BACILLUS SUBTILIS] [EC:2.7.7.41] [DE:SYNTHASE)] [SP:O31752] [DB:swissprot] >pir:[LN:G69597] [AC:G69597] [PN:phosphatidate cytidylyltransferase cdsA] [GN:cdsA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185245:g2634026] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:phosphatidate cytidylyltransferase] [GN:cdsA] [FN:phospholipid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.41] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:O31752] [LE:122972] [RE:123781] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6929652_c1_822 614 4386 744 247 683 3.1e−67 Description pir:[LN:F69866] [AC:F69866] [PN:tetrahydrodipicolinate succinylase homolog ykuQ] [GN:ykuQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181922:g2632238] [LN:BS16829KB] [AC:AJ222587] [PN:YkuQ protein] [GN:ykuQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 29kB DNA fragment from ykwC gene to cse15 gene.] [NT:homologous to acetyltransferases] [LE:23332] [RE:24042] [DI:direct] >gp:[GI:e1185008:g2633789] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykuQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to tetrahydrodipicolinate succinylase] [LE:93588] [RE:94298] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6929677_c1_766 615 4387 258 85 187 1.1e−14 Description pir:[LN:B69884] [AC:B69884] [PN:host factor-1 protein homolog ymaH] [GN:ymaH] [CL:host factor I] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183393:g2634118] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ymaH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:similar to host factor-1 protein] [LE:85414] [RE:856351 [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_6933390_c1_759 616 4388 552 183 402 1.9e−37 Description sp:[LN:GLPP_BACSU] [AC:P30300] [GN:GLPP] [OR:BACILLUS SUBTILIS] [DE:GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN] [SP:P30300] [DB:swissprot] >pir:[LN:B47700] [AC:B47700:D69634] [PN:glycerol metabolism regulatory protein GlpP] [GN:glpP] [OR:Bacillus subtilis] [DB:pir2] [MP:75 (degrees)] >gp:[GI:g142996] [LN:BACGLPPFK] [AC:M99611] [PN:regulatory protein] [GN:glpP] [FN:putative antiterminator] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis antiterminator regulatory protein (glpP), glycerol uptake facilitator (glpF) genes, complete cds, glycerolkinase (glpK) gene, 5′ end.] [LE:328] [RE:906] [DI:direct] >gp:[GI:e1182916:g2633250] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:transcription antiterminator] [GN:glpP] [FN:control of mRNA stability of glpD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [SP:P30300] [LE:198429] [RE:199007] [DI:direct] >gp:[GI:e1182928:g2633262] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:transcription antiterminator] [GN:glpP] [FN:control of mRNA stability of glpD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [SP:P30300] [LE:1749] [RE:2327] [DI:direct] >gp:[GI:e324939:g2226135] [LN:BSY14079] [AC:Y14079] [PN:regulatory protein] [GN:glpP] [FN:putative antiterminator] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees: glpPFKDoperon and downstream.] [NT:see EMBL M99611 and Swiss Prot P30300.] [SP:P30300] [LE:1397] [RE:1975] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_7064077_c1_740 617 4389 2187 728 2508 1.3e−260 Description sp:[LN:IF2_BACSU] [AC:P17889:O31757] [GN:INFB] [OR:BACILLUS SUBTILIS] [DE:TRANSLATION INITIATION FACTOR IF-2] [SP:P17889:O31757] [DB:swissprot] >pir:[LN:A35269] [AC:A35269:B35269:S31994:G69644] [PN:translation initiation factor IF-2] [GN:infB] [CL:translation initiation factor IF-2:translation elongation factor Tu homology] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g143359] [LN:BACPSIF2A] [AC:M34836] [OR:Bacillus subtilis] [SR:B. subtilis (strain RS410) DNA, clones lambda-JET[1, 2], pUK, an] [DB:genpept-bct1] [DE:B. subtilis protein synthesis initiation factor 2 (infB) gene, complete cds.] [NT:protein synthesis initiation factor 2 (infB)] [LE:381] [RE:2531] [DI:direct] >gp:[GI:g49319] [LN:BSORF1T7A] [AC:Z18631] [GN:IF2] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis infB-nusA operon.] [SP:P17889] [LE:2689] [RE:4839] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_7203176_c1_810 618 4390 801 266 426 5.4e−40 Description sp:[LN:TRPA_METJA] [AC:Q60180] [GN:TRPA:MJ1038] [OR:METHANOCOCCUS JANNASCHII] [EC:4.2.1.20] [DE:TRYPTOPHAN SYNTHASE ALPHA CHAIN,] [SP:Q60180] [DB:swissprot] >pir:[LN:E64429] [AC:E64429] [PN:tryptophan synthase, alpha chain] [CL:tryptophan synthase alpha chain:tryptophan synthase alpha chain homology] [OR:Methanococcus jannaschii] [EC:4.2.1.20] [DB:pir2] [MP:FOR969735–970589] >gp:[GI:g1591691] [LN:U67546] [AC:U67546:L77117] [PN:tryptophan synthase alpha subunit (trpA)] [GN:MJ1038] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 88 of 150 of the complete genome.] [NT:similar to GB:M65060 SP:P26920 PID:149750] [LE:5837] [RE:6691] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_7242250_c2_924 619 4391 681 226 306 2.8e−27 Description gp:[GI:g5002553] [LN:AF074603] [AC:AF074603] [PN:NonF] [GN:nonF] [OR:Streptomyces griseus subsp. griseus] [DB:genpept-bct2] [DE:Streptomyces griseus subsp. griseus nonactin biosynthesis gene cluster, partial sequence.] [LE:12384] [RE:13088] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_801552_f2_228 620 4392 381 126 74 0.011 Description gp:[GI:g2454643] [LN:AF020905] [AC:AF020905] [PN:E5] [GN:E5] [OR:common chimpanzee papillomavirus 1] [DB:genpept-vrl] [DE:Common chimpanzee papillomavirus 1, complete genome.] [LE:3901] [RE:4185] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_835252_f1_13 621 4393 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_837550_c2_914 622 4394 246 81 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_869052_c2_876 623 4395 1677 558 1700 5.3e−175 Description sp:[LN:GLPD_BACSU] [AC:P18158] [GN:GLPD] [OR:BACILLUS SUBTILIS] [EC:1.1.99.5] [DE:AEROBIC GLYCEROL-3-PHOSPHATE DEHYDROGENASE,] [SP:P18158] [DB:swissprot] >pir:[LN:C45868] [AC:C45868:A69634:S18565] [PN:glycerol-3-phosphate dehydrogenase, glpD] [GN:glpD] [OR:Bacillus subtilis] [EC:1.1.99.5] [DB:pir2] >gp:[GI:g142993] [LN:BACGLPKD] [AC:M34393] [OR:Bacillus subtilis] [SR:B. subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:B. subtilis glycerol kinase (glpK) and glycerol-3-phosphatedehydrogenase (glpD) genes, complete cds.] [NT:glycerol-3-phosphate dehydrogenase (glpD] [EC] [LE:2329] [RE:3996] [DI:direct] >gp:[GI:e1182919:g2633253] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:glycerol-3-phosphate dehydrogenase] [GN:glpD] [FN:glycerol utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.99.5] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [SP:P18158] [LE:201660] [RE:203327] [DI:direct] >gp:[GI:e1182931:g2633265] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:glycerol-3-phosphate dehydrogenase] [GN:glpD] [FN:glycerol utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.99.5] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [SP:P18158] [LE:4980] [RE:6647] [DI:direct] >gp:[GI:e324942:g2226138] [LN:BSY14079] [AC:Y14079] [PN:glycerol-3-phosphate dehydrogenase] [GN:glpD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees:glpPFKDoperon and downstream.] [NT:see EMBL M34393 and Swiss Prot P18158.] [SP:P18158] [LE:4628] [RE:6295] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_891700_c2_865 624 4396 867 288 599 2.5e−58 Description pir:[LN:S22397] [AC:522397] [PN:pyruvate synthase, beta chain] [CL:pyruvate synthase beta chain] [OR:Halobacterium halobium] [EC:1.2.7.1] [DB:pir2] >gp:[GI:g43499] [LN:HHFEROXI] [AC:X64521] [PN:ferredoxin oxidoreductase] [OR:Halobacterium halobium] [DB:genpept-bct1] [EC:1.2.7.1] [DE:H. halobium gene for pyruvate:ferredoxin oxidoreductase.] [NT:beta-subunit; pyruvate synthase] [LE:2057] [RE:2995] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_892186_f1_171 625 4397 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_893826_f2_384 626 4398 123 40 49 0.031 Description pir:[LN:D64600] [AC:D64600] [PN:conserved hypothetical integral membrane protein HP0644] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313764] [LN:AE000578] [AC:AE000578:AE000511] [PN:conserved hypothetical integral membrane] [GN:HP0644] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 56 of 134 of the complete genome.] [NT:similar to SP:P25254 percent identity:30.26;] [LE:6414] [RE:6707] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_9767263_c2_866 627 4399 639 212 280 1.6e−24 Description pir:[LN:A69922] [AC:A69922] [PN:phage-related replication protein homolog yoqZ] [GN:yoqZ] [CL:phage-related replication protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185518:g2634439] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yoqZ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [NT:similar to phage-related protein] [LE:189032] [RE:189856] [DI:complement] >gp:[GI:g3025599] [LN:AF020713] [AC:AF020713] [GN:yoqZ] [OR:Bacteriophage SPBc2] [DB:genpept-phg] [DE:Bacteriophage SPBc2 complete genome.] [NT:similar to bacteriophage SPP1 ORF37.1 product] [LE:95664] [RE:96488] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_978450_c1_804 628 4400 2049 682 965 4.1e−97 Description gp:[GI:d1025380:g2804528] [LN:D85082] [AC:D85082] [PN:YfiX] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:7094] [RE:8926] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_9798180_c1_792 629 4401 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_9804202_c1_732 630 4402 627 208 704 1.9e−69 Description pir:[LN:B69727] [AC:B69727] [PN:translation elongation factor EF-Ts tsf] [GN:tsf] [CL:translation elongation factor EF-Ts] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185241:g2634022] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:elongation factor Ts] [GN:tsf] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P80700] [LE:119747] [RE:120628] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_9807807_c1_748 631 4403 873 290 522 3.6e−50 Description gp:[GI:g1842437] [LN:BSU87792] [AC:U87792] [PN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis tRNA-Ala, phosphatidylglycerophosphate synthase(pgsA) and CinA (cinA) genes, complete cds, and RecA (recA) gene, partial cds.] [NT:hypothetical 17.9 kDa protein; ORF158] [LE:3676] [RE:4152] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_9814213_f3_499 632 4404 471 156 232 1.9e−19 Description pir:[LN:C69419] [AC:C69419] [PN:phosphate ABC transporter, periplasmic phosphate-binding protein (phoX) homolog] [CL:sphX protein] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649219] [LN:AE001010] [AC:AE001010:AE000782] [PN:phosphate ABC transporter, periplasmic] [GN:AF1356] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 97 of 172 of the complete genome.] [NT:similar to PID:1052826 percent identity:25.09;] [LE:4300] [RE:5283] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_9862675_f2_310 633 4405 135 44 Description NO-HIT

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000983_995967_c2_888 634 4406 747 248 341 5.4e−31 Description pir:[LN:B70039] [AC:B70039] [PN:hypothetical protein yvfS] [GN:yvfS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186096:g2635921] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvfS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [LE:97127] [RE:97864] [DI:complement] >gp:[GI:e313010:g1945719] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvfS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:probable permease] [LE:83807] [RE:84544] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_10017151_f3_388 635 4407 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_10039050_f1_17 636 4408 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_10193760_f1_89 637 4409 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_10553125_f3_371 638 4410 810 269 335 1.6e−31 Description gp:[GI:g211700] [LN:CHKCX] [AC:M13496] [PN:type X collagen] [OR:Gallus gallus] [SR:Chicken red blood cell DNA, clone pYN92E1; and embryo chondrocyte] [DB:genpept-vrt] [DE:Chicken type X collagen gene.] [LE:<380] [RE:2208] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_10665903_c1_491 639 4411 378 125 151 6.0e−10 Description sp:[LN:YCGC_ECOLI] [AC:P37349:P76013] [GN:YCGC] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 51.6 KD PROTEIN IN TREA-PTH INTERGENIC REGION] [SP:P37349:P76013] [DB:swissprot] >pir:[LN:C64866] [AC:C64866 [PN:trehalase precursor] [GN:ycgC] [CL:phosphotransferase system phosphohistidine-containing protein homology] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1037041:g4062781] [LN:D90754] [AC:D90754:AB001340] [PN:Hypothetical protein in treA 5′region.] [GN:ycgC] [OR:Escherichia coli] [SR:Escherichia coli(strain:K12) DNA, clone:Kohara clone #245] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (26.8–27.1 mm).] [NT:ORF_ID:o245#7; similar to SwissProt Accession] [LE:9793] [RE:11214] [DI:complement] >gp:[GI:g1787448] [LN:AE000218] [AC:AE000218:U00096] [PN:putative PTS system enzyme I] [GN:ycgC] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 108 of 400 of the complete genome.] [NT:f473; 100 pct identical to fragment YCGC_ECOLI] [LE:3099] [RE:4520] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_10828312_f1_104 640 4412 1617 538 272 1.2e−20 Description pir:[LN:D69796] [AC:D69796] [PN:two-component sensor histidine kinase homolog yesM] [GN:yesM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182674:g2633008] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yesM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to two-component sensor histidine kinase] [LE:157527] [RE:159260] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_1182765_c3_673 641 4413 7215 2404 2909 0.0 Description gp:[GI:g2982196] [LN:AF007865] [AC:AF007865] [PN:bacitracin synthetase 3] [GN:bacC] [OR:Bacillus licheniformis] [DB:genpept-bct2] [DE:Bacillus licheniformis bacitracin synthetase operon, complete sequence; BacS (bacS), BcrA (bcrA), BcrB (bcrB), and BcrC (bcrC) genes, complete cds.] [NT:peptide synthetase; BA3; BacC] [LE:25258] [RE:44337] (DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_11832518_c2_558 642 4414 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_11895058_c1_444 643 4415 939 312 164 5.1e−10 Description pir:[LN:S25140] [AC:S25140] [PN:serine proteinase homolog] [OR:Enterococcus faecalis] [DB:pir2] >gp:[GI:g43338] [LN:EFSPREG] [AC:Z12296] [PN:Staphylococcal serine proteinase homologue] [GN:sprE] [OR:Enterococcus faecalis] [DB:genpept-bct1] [DE:E. faecalis sprE gene for serine proteinase homologue.] [LE:91] [RE:945] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_12554627_c3_625 644 4416 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_1367200_f2_264 645 4417 624 207 104 0.00095 Description Sp:[LN:VS10_ROTBS] [AC:P34718] [GN:S10] [OR:BOVINE ROTAVIRUS] [SR:GROUP C/ SHINTOKU,] [DE:MINOR OUTER CAPSID PROTEIN (NS26)] [SP:P34718] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_1367202_c1_489 646 4418 963 320 516 1.1e−60 Description pir:[LN:E64866] [AC:E64866] [PN:hypothetical protein b1200] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1037043:g4062783] [LN:D90754] [AC:D90754:AB001340] [PN:Hypothetical protein] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone:Kohara clone #245] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (26.8–27.1 min).] [NT:ORF_ID:o246#2; similar to PIR Accession Number] [LE:11865] [RE:12965] [DI:complement] >gp:[GI:g1787450] [LN:AE000218] [AC:AE000218:U00096] [PN:putative dihydroxyacetone kinase (EC 2.7.1.2)] [GN:b1200] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 108 of 400 of the complete genome.] [NT:f366; 35 pct identical (32 gaps) to 355 residues] [LE:5171] [RE:6271] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_1367340_c1_424 647 4419 843 280 250 9.9e−31 Description gp:[GI:e187587:g1420862] [LN:SPOPPDACA] [AC:X89237] EPN:oligopeptidepermease] [GN:oppD] [OR:Streptococcus pyogenes] [DB:genpept-bct1] [DE:S. pyogenes DNA for oppA, oppB, oppC, oppD, oppF, and dacA genes.] [LE:5854] [RE:6924] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_13707008_f3_321 648 4420 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_1385962_c3_666 649 4421 984 327 1016 1.6e−102 Description sp:[LN:BIOB_BACSU] [AC:P53557] [GN:BIOB] [OR:BACILLUS SUBTILIS] [EC:2.8.1.6] [DE:BIOTIN SYNTHASE, (BIOTIN SYNTHETASE)] [SP:P53557] [DB:swissprot] >pir:[LN:D69594] [AC:D69594] [PN:biotin synthetase bioB] [GN:bioB] [CL:biotin synthetase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1277029] [LN:BSU51868] [AC:U51868] [PN:biotin synthase] [GN:bioB] [FN:biotin pathway] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis biotin biosynthetic operon genes, complete and partial cds.] [LE:6088] [RE:7095] [DI:direct] >gp:[GI:e1185893:g2635504] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:biotin synthetase] [GN:bioB] [FN:biotin biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.8.1.—] [DE:Bacillus subtilis complete genome (section 16 of 21) from 2997771 to 3213410.] [SP:P53557] [LE:91793] [RE:92800] [DI:complement] >gp:[GI:g2293187] [LN:AF008220] [AC:AF008220] [PN:biotin synthase] [GN:bioB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:87627] [RE:88634] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_14492327_c1_486 650 4422 429 142 495 2.6e−47 Description sp:[LN:FOSB_STAEP] [AC:Q03377] [GN:FOSB] [OR:STAPHYLOCOCCUS EPIDERMIDIS] [DE:FOSFOMYCIN RESISTANCE PROTEIN] [SP:Q03377] [DB:swissprot] >pir:[LN:B48175] [AC:B48175] [PN:fosfomycin resistance protein B] [CL:fosfomycin resistance protein] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g46982] [LN:SEFOSB] [AC:X54227] [GN:fosB] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis plasmid pIP1842 fosB gene for FOSB.] [SP:Q03377] [LE:714] [RE:1133] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_14510962_c1_446 651 4423 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_14895212_c3_639 652 4424 822 273 980 1.1e−98 Description gp:[GI:g3800821] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative ATPase domain] [GN:opp-1D] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:3335] [RE:4150] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_157625_c1_428 653 4425 930 309 111 0.00054 Description gp:[GI:e1407888:g4493994] [LN:PFMAL3P7] [AC:AL034559] [GN:MAL3P7.44] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P7, complete sequence.] [NT:predicted using hexExon; MAL3P7.44 (PFC1065w),] [LE:188885] [RE:191470] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_162550_c3_650 654 4426 198 65 49 0.035 Description sp:[LN:YPMB_BACSU] [AC:P54396] [GN:YPMB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 17.9 KD PROTEIN IN DING-ASPB INTERGENIC REGION] [SP:P54396] [DB:swissprot] >pir:[LN:F69938] [AC:F69938] [PN:hypothetical protein ypmB] [GN:ypmB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146245] [LN:BACYPIA] [AC:L47709] [GN:ypmB] [FN:hypothetical] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes, ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:putative] [LE:18616] [RE:19101] [DI:direct] >gp:[GI:e1183683:g2634656] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypmB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [SP:P54396] [LE:152566] [RE:153051] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_162578_c1_425 655 4427 984 327 338 1.1e−30 Description pir:[LN:A69867] [AC:A69867] [PN:conserved hypothetical protein ykuT] [GN:ykuT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181925:g2632241] [LN:BS16829KB] [AC:AJ222587] [PN:YkuT protein] [GN:ykuT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 29 kB DNA fragment from ykwC gene to cse15 gene.] [LE:25580] [RE:26383] [DI:complement] >gp:[GI:e1185011:g2633792] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykuT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:95836] [RE:96639] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_16486075_f2_138 656 4428 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_165902_c3_674 657 4429 627 208 185 1.8e−14 Description sp:[LN:LP14_BACSU] [AC:P39144] [GN:LPA-14] [OR:BACILLUS SUBTILIS] [DE:LIPOPEPTIDE ANTIBIOTICS ITURIN A AND SURFACTIN BIOSYNTHESIS PROTEIN] [SP:P39144] [DB:swissprot] >pir:[LN:I39875] [AC:I39875] [PN:siderophore biosynthesis regulatory protein sfp:lipopeptide antibiotics iturin A:surfactin production protein] [GN:lpa-14:sfb:sfp:sfp(0)] [CL:siderophore biosynthesis regulatory protein sfp] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005421:g473916] [LN:BACLPA14] [AC:D21876] [PN:lipopeptide antibiotics iturin A] [GN:lpa-14] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:RB14) DNA] [DB:genpept-bct1] [DE:B. subtilis lpa-14 gene encoding lipopeptide antibiotics iturin A.] [LE:1] [RE:675] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_187561_c1_470 658 4430 879 292 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_194010_c3_607 659 4431 1512 503 1381 3.4e−141 Description gp:[GI:d1039113:g4514332] [LN:AB013369] [AC:AB013369] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 yesT and comEC genes, partial and complete cds.] [NT:unknown] [LE:4328] [RE:5830] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_19688401_c2_516 660 4432 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_19773387_f3_363 661 4433 1248 415 746 6.6e−74 Description sp:[LN:STPA_STAAU] [AC:P81297] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.4.22.—] [DE:STAPHOPAIN,] [SP:P81297] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_20585963_f3_396 662 4434 897 298 657 1.8e−64 Description gp:[GI:g929972] [LN:BAU30714] [AC:U30714] [OR:Bacillus anthracis] [SR:plasmid pXO1] [DB:genpept-bct1] [DE:Bacillus anthracis Weybridge A toxin plasmid pXO1 right inverted repeat element (WeyAR) bordering the toxin-encoding region, ORFA and ORFB genes, complete cds.] [NT:ORFB; similar to B. anthracis SterneL element ORFB;] [LE:512] [RE:1336] [DI:direct] >gp:[GI:g929975] [LN:BAU30715] [AC:U30715] [OR:Bacillus anthracis] [SR:plasmid pXO1] [DB:genpept-bct1] [DE:Bacillus anthracis Sterne toxin plasmid pXO1 left inverted repeat element (SterneL) bordering the toxin-encoding region, ORFB and truncated ORFA genes, complete cds.] [NT:ORFB; similar to B. anthracis WeyAR element ORFB;] [LE:458] [RE:1282] [DI:direct] >gp:[GI:g4894312] [LN:AF065404] [AC:AF065404] [PN:pXO1-96] [OR:Bacillus anthracis] [DB:genpept-bct2] [DE:Bacillus anthracis virulence plasmid PXO1, complete sequence.] [LE:116307] [RE:117131] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_20704012_f1_106 663 4435 240 79 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_20979688_c2_511 664 4436 786 261 369 5.9e−34 Description sp:[LN:NIKC_ECOLI] [AC:P33592] [GN:NIKC] [OR:ESCHERICHIA COLI] [DE:NICKEL TRANSPORT SYSTEM PERMEASE PROTEIN NIKC] [SP:P33592] [DB:swissprot] >pir:[LN:S39596] [AC:S39596:S47697:A65145] [PN:nikC protein] [GN:nikC] [CL:oligopeptide permease protein oppB] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g581141] [LN:ECNIK] [AC:X73143] [PN:NikC] [GN:nikC] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E. coli DNA sequence of nik locus.] [SP:P33592] [LE:2942] [RE:3775] [DI:direct] >gp:[GI:g912461] [LN:ECOUW76] [AC:U00039] [GN:nikC] [OR:Escherichia coli] [SR:Escherichia coli (sub_strain MG1655, strain K-12) (library:lambda] [DB:genpept-bct1] [DE:E. coli chromosomal region from 76.0 to 81.5 minutes.] [LE:30444] [RE:31277] [DI:direct] >gp:[GI:g1789889] [LN:AE000423] [AC:AE000423:U00096] [PN:transport of nickel, membrane protein] [GN:nikC] [FN:transport; Transport of small molecules:] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 313 of 400 of the complete genome.] [NT:o277] [LE:7496] [RE:8329] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_212827_f3_295 665 4437 1482 493 429 2.6e−40 Description pir:[LN:G70006] [AC:G70006] [PN:multidrug resistance protein homolog yubD] [GN:yubD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185986:g2635597] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:yubD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to multidrug resistance protein] [LE:193143] [RE:194678] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_21588287_f2_271 666 4438 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_21907016_f1_123 667 4439 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_22042337_c2_588 668 4440 1434 477 981 8.3e−99 Description pir:[LN:F69763] [AC:F69763] [PN:multidrug resistance protein homolog ycnB] [GN:ycnB] [CL:lincomycin-resistance protein lmrB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182351:g2632685] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycnB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to multidrug resistance protein] [LE:32866] [RE:34284] [DI:complement] >gp:[GI:d1009651:g1805454] [LN:D50453] [AC:D50453] [PN:homologue of multidrug resistance protein B,] [GN:ycnB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:115269] [RE:116687] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_222323413_c2_518 669 4441 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_22464127_f2_191 670 4442 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_22537818_c2_513 671 4443 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_22664140_f3_335 672 4444 1395 464 191 1.0e−11 Description pir:[LN:F69280] [AC:F69280] [PN:iron (II) transporter (feoB-1) homolog] [CL:ferrous iron transport protein B:translation elongation factor Tu homology] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2650395] [LN:AE001089] [AC:AE001089:AE000782] [PN:iron (II) transporter (feoB-1)] [GN:AF0246] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 18 of 172 of the complete genome.] [NT:similar to GB:L77117 SP:Q57986 PID:1591272 percent] [LE:10039] [RE:11958] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_22664550_c2_512 673 4445 663 220 275 5.4e−24 Description pir:[LN:C65145] [AC:C65145:S39598:S47699] [PN:nikE protein] [GN:nikE] [CL:unassigned ATP-binding cassette proteins:ATP-binding cassette homology] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g466616] [LN:ECOUW76] [AC:U00039] [GN:nikE] [OR:Escherichia coli] [SR:Escherichia coli (sub_strain MG1655, strain K-12) (library:lambda] [DB:genpept-bct1] [DE:E. coli chromosomal region from 76.0 to 81.5 minutes.] [LE:32038] [RE:32844] [DI:direct] >gp:[GI:g1789891] [LN:AE000423] [AC:AE000423:U00096] [PN:ATP-binding protein of nickel transport system] [GN:nikE] [FN:transport; Transport of small molecules:] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 313 of 400 of the complete genome.] [NT:o268] [LE:9090] [RE:9896] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_22853432_c1_448 674 4446 384 127 152 2.4e−10 Description sp:[LN:INVO_PIG] [AC:P18175] [GN:IVL] [OR:SUS SCROFA] [SR:,PIG] [DE:INVOLUCRIN] [SP:P18175] [DB:swissprot] >pir:[LN:I46592] [AC:I46592] [PN:involucrin] [CL:involucrin] [OR:Sus scrofa domestica] [SR:, domestic pig] [DB:pir2] >gp:[GI:g164523] [LN:PIGINVOLA] [AC:M34441] [OR:Sus scrofa] [SR:Pig (Yorkshire) adult skin keratinocyte DNA] [DB:genpept-mam] [DE:Pig involucrin gene, complete cds.] [NT:involucrin] [LE:1] [RE:1044] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_23444425_c1_426 675 4447 846 281 362 3.2e−33 Description pir:[LN:B69834] [AC:B69834] [PN:conserved hypothetical protein yhjK] [GN:yhjK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183056:g2633390] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhjK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:127427] [RE:128287] [DI:complement] >gp:[GI:e324984:g2226183] [LN:BSY14081] [AC:Y14081] [PN:hypothetical protein] [GN:yhjK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 92 degrees:region between comK and addAB.] [NT:Similarity to a large family of hypothetical] [LE:9722] [RE:10582] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_23470290_c2_554 676 4448 915 304 1205 1.5e−122 Description gp:[GI:g3800820] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative membrane] [GN:opp-1C] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:2469] [RE:3338] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_235837_c1_471 677 4449 1425 474 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_23601510_c1_488 678 4450 1137 378 911 2.2e−91 Description sp:[LN:GLDA_BACST] [AC:P32816] [GN:GLDA:GLD] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:1.1.1.6] [DE:GLYCEROL DEHYDROGENASE, (GLDH)] [SP:P32816] [DB:swissprot] >pir:[LN:JQ1474] [AC:JQ1474:S38514] [PN:glycerol dehydrogenase,] [GN:gldA] [CL:glycerol dehydrogenase:lactaldehyde reductase homology] [OR:Bacillus stearothermophilus] [EC:1.1.1.6] [DB:pir2] >gp:[GI:g142978] [LN:BACGLDA] [AC:M65289] [PN:glycerol dehydrogenase] [GN:gld] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (sub_species nondiastaticus) (library] [DB:genpept-bct1] [EC:1.1.1.6] [DE:Bacillus stearothermophilus glycerol dehydrogenase (proposed gld) gene, complete cds.] [LE:742] [RE:1854] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_23652218_c1_459 679 4451 168 55 83 0.0012 Description sp:[LN:GGI3_STAHA] [AC:P11699] [OR:STAPHYLOCOCCUS HAEMOLYTICUS] [DE:ANTIBACTERIAL PROTEIN 3 (GONOCOCCAL GROWTH INHIBITOR 3)] [SP:P11699] [DB:swissprot] >pir:[LN:BXSA3] [AC:S00601] [PN:antibacterial protein 3:gonococcal growth inhibitor 3] [CL:Staphylococcus haemolyticus antibacterial protein] [OR:Staphylococcus haemolyticus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_23860307_c3_641 680 4452 1218 405 1603 1.0e−164 Description gp:[GI:g3800823] [LN:AF076683] [AC:AF076683] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [NT:orfX] [LE:4904] [RE:6097] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24000275_f3_303 681 4453 1026 341 1033 2.5e−104 Description sp:[LN:OTCC_HAEIN] [AC:P44770] [GN:ARCB:HI0596] [OR:HAEMOPHILUS INFLUENZAE] [EC:2.1.3.3] [DE:ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC, (OTCASE)] [SP:P44770] [DB:swissprot] >pir:[LN:H64079] [AC:H64079] [PN:ornithine carbamoyltransferase,] [CL:ornithine carbamoyltransferase: aspartate/ornithine carbamoyltransferase homology] [OR:Haemophilus influenzae] [EC:2.1.3.3] [DB:pir2] >gp:[GI:g1573585] [LN:U32741] [AC:U32741:L42023] [PN:ornithine carbamoyltransferase (arcB)] [GN:HI0596] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 56 of 163 of the complete genome.] [NT:similar to GB:X05637 SP:P08308 PID:45288 percent] [LE:3467] [RE:4471] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24095387_c1_438 682 4454 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24105393_c2_562 683 4455 768 255 711 3.4e−70 Description gp:[GI:e1456529:g4914622] [LN:LMAJ9627] [AC:AJ009627] [PN:pyruvate-formate lyase activating enzyme] [GN:pflC] [OR:Listeria monocytogenes] [DB:genpept-bct1] [DE:Listeria monocytogenes pflC, orfA, lltB and orfC genes.] [NT:putative; similar to Streptococcus mutans PflC] [LE:149] [RE:895] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24225375_c2_533 684 4456 213 70 97 3.9e−05 Description gp:[GI:g3212079] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 1] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenolsoluble modulin beta 2 genes, complete cds.] [NT:PSM beta 1] [LE:669] [RE:803] [DI:direct] >gp:[GI:g3212080] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 2] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenolsoluble modulin beta 2 genes, complete cds.] [NT:PSM beta 2] [LE:859] [RE:993] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24257881_f1_68 685 4457 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24266041_f1_22 686 4458 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24391678_f1_120 687 4459 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24407677_f3_293 688 4460 234 77 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24650300_c1_476 689 4461 1365 454 1037 9.6e−105 Description sp:[LN:BRNQ_LACDL] [AC:P54104] [GN:BRNQ] [OR:LACTOBACILLUS DELBRUECKII] [SR:,SUBSPLACTIS] [DE:CHAIN AMINO ACID UPTAKE CARRIER)] [SP:P54104] [DB:swissprot] >pir:[LN:S60180] [AC:S60180 ] [PN:branched-chain amino acid carrier brnQ] [GN:brnQ] [CL:branched-chain amino acid transport system II carrier protein braZ] [OR:Lactobacillus delbrueckii] [DB:pir2] >gp:[GI:g732813] [LN:LDBRNQGN] [AC:Z48676] [PN:branched-chain amino acid carrier] [GN:brnQ] [FN:transport of branched-chain amino acids (Leu,] [OR:Lactobacillus delbrueckii] [DB:genpept-bct1] [DE:L. delbrueckii brnQ gene for branched-chain amino acid carrier.] [SP:P54104] [LE:611] [RE:1951] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24664012_f2_199 690 4462 453 150 82 0.0052 Description gp:[GI:d1025730:g2879910] [LN:D85752] [AC:D85752] [GN:bacD] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis plasmid:pPD1 DNA] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pPD1 bacA, bacB, bacC, bacD, bacE, bacF, bacG, bacH and bacI genes, complete cds.] [LE:3977] [RE:4324] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24711588_c2_589 691 4463 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24884688_c2_509 692 4464 528 175 216 5.6e−17 Description gp:[GI:g3800818] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative substrate] [GN:opp-1A] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:64] [RE:1524] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_24886552_c3_635 693 4465 792 263 603 9.4e−59 Description gp:[GI:d1037145:g4062842] [LN:AB009078] [AC:AB009078] [PN:L-2.3-butanediol dehydrogenase] [OR:Brevibacterium saccharolyticum] [SR:Brevibacterium saccharolyticum DNA] [DB:genpept-bct1] [DE:Brevibacterium saccharolyticum gene for L-2.3-butanedioldehydrogenase, complete cds.] [LE:1743] [RE:2519] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_25429665_c1_496 694 4466 1338 445 267 4.3e−21 Description pir:[LN:S58131] [AC:S58131] [PN:integral membrane protein LmrP] [OR:Lactococcus lactis] [DB:pir2] >gp:[GI:g1052754] [LN:LLLMRP] [AC:X89779] [PN:LmrP integral membrane protein] [GN:lmrP] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:L. lactis DNA for LmrP gene.] [LE:634] [RE:1860] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_25476378_f1_13 695 4467 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_25894687_c3_624 696 4468 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26182681_c3_595 697 4469 528 175 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26208450_f1_24 698 4470 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26229678_f1_27 699 4471 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26265641_c2_543 700 4472 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26367135_c1_508 701 4473 2079 692 1496 2.2e−153 Description sp:[LN:LIP_STAEP] [AC:Q02510] [GN:GEHC] [OR:STAPHYLOCOCCUS EPIDERMIDIS] [EC:3.1.1.3] [DE:LIPASE PRECURSOR, (GLYCEROL ESTER HYDROLASE)] [SP:Q02510] [DB:swissprot] >pir:[LN:A47705] [AC:A47705] [PN:triacylglycerol lipase,] [CL:Staphylococcus triacyiglycerol lipase] [OR:Staphylococcus epidermidis] [EC:3.1.1.3] [DB:pir2] >gp:[GI:g153022] [LN:STAGEHC] [AC:M95577] [PN:lipase] [GN:gehC] [OR:Staphylococcus epidermidis] [SR:Staphylococcus epidermidis (strain 9) DNA] [DB:genpept-bct1] [DE:Staphylococcus epidermidis lipase (gehC) gene, complete cds.] [NT:GTG start codon] [LE:121] [RE:2187] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26369027_f2_260 702 4474 984 327 1350 6.5e−138 Description pir:[LN:E69806] [AC:E69806] [PN:conserved hypothetical protein yfjN] [GN:yfjN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182793:g2633127] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfjN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to hypothetical proteins] [LE:73112] [RE:74089] [DI:direct] >gp:[GI:d1025211:g2780398] [LN:D78509] [AC:D78509] [PN:YfjN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis YfjG-YfjR genes, complete cds.] [LE:12236] [RE:13213] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_2660936_f2_253 703 4475 513 170 373 2.2e−34 Description sp:[LN:Y318_HAEIN] [AC:P43984] [GN:HI0318] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI0318] [SP:P43984] [DB:swissprot] >pir:[LN:B64006] [AC:B64006] [PN:hypothetical protein HI0318] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573288] [LN:U32717] [AC:U32717:L42023] [PN:conserved hypothetical protein] [GN:HI0318] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 32 of 163 of the complete genome.] [NT:similar to SP:P54158 PID:1256620 GB:AL009126] [LE:4064] [RE:4582] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26759430_c3_654 704 4476 978 325 872 2.9e−87 Description pir:[LN:E69670] [AC:E69670] [PN:glycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC] [GN:opuCC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186069:g2635894] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCC] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:yvbC] [LE:67766] [RE:68677] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26760076_f3_305 705 4477 1578 525 1550 4.2e−159 Description sp:[LN:YFCC_HAEIN] [AC:P44023] [GN:HI0594] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI0594] [SP:P44023] [DB:swissprot] >pir:[LN:E64010] [AC:E64010] [PN:hypothetical protein HI0594] [CL:Haemophilus influenzae conserved hypothetical protein HI0594] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573583] [LN:U32741] [AC:U32741:L42023] [PN:conserved hypothetical transmembrane protein] [GN:HI0594] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 56 of 163 of the complete genome.] [NT:similar to GB:AE000783 percent identity:35.02;] [LE:891] [RE:2420] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_26774137_c2_574 706 4478 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_272593_c3_636 707 4479 879 292 82 0.0082 Description sp:[LN:YORB_LISMO] [AC:P33382] [OR:LISTERIA MONOCYTOGENES] [DE:HYPOTHETICAL 12.0 KD PROTEIN IN PLCB-LDH INTERGENIC REGION (ORFB)] [SP:P33382] [DB:swissprot] >pir:[LN:143868] [AC:143868] [PN:ORFB] [CL:hypothetical protein MJ1413] [OR:Listeria monocytogenes] [DB:pir2] >gp:[GI:g149648] [LN:LISACTLDH] [AC:M82881] [OR:Listeria monocytogenes] [SR:Listeria monocytogenes (strain L028) DNA] [DB:genpept-bct1] [DE:Listeria monocytogenes lecithinase, lactate dehydrogenase (actA) gene complete cds, (plcB) gene complete cds, (ldh) gene complete cds.] [NT:ORFB] [LE:4094] [RE:4426] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_2906307_f1_60 708 4480 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_2928437_c1_477 709 4481 921 306 375 1.4e−34 Description pir:[LN:A69401] [AC:A69401] [PN:conserved hypothetical protein AF1210] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649377] [LN:AE001021] [AC:AE001021:AE000782] [PN:conserved hypothetical protein] [GN:AF1210] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 86 of 172 of the complete genome.] [NT:similar to GP:1654020 percent identity:34.56;] [LE:12088] [RE:13029] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_2929718_c1_463 710 4482 1959 652 3345 0.0 Description gp:[GI:g3789932] [LN:AF090142] [AC:AF090142] [PN:lipase precursor] [GN:gehD] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [EC:3.1.1.3] [DE:Staphylococcus epidermidis lipase precursor (gehD) gene, complete cds.] [NT:GehD] [LE:293] [RE:2224] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_29398437_f2_132 711 4483 234 77 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_3003137_f2_215 712 4484 906 301 294 5.2e−26 Description pir:[LN:H70313] [AC:H70313] [PN:cobalamin synthesis related protein CobW] [GN:cobW] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2982874] [LN:AE000675] [AC:AE000675:AE000657] [PN:cobalamin synthesis related protein CobW] [GN:cobW] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 7 of 109 of the complete genome.] [LE:11287] [RE:12165] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_30103592_c3_600 713 4485 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_30251551_f3_412 714 4486 159 52 73 0.027 Description sp:[LN:YO21_BPHP1] [AC:P51723] [OR:BACTERIOPHAGE HP1] [DE:HYPOTHETICAL 19.2 KD PROTEIN IN REP-HOL INTERGENIC REGION (ORF21)] [SP:P51723] [DB:swissprot] >pir:[LN:S69527] [AC:S69527] [PN:hypothetical protein 21] [OR:phage HP1] [DB:pir2] >gp:[GI:g1046248] [LN:BHU24159] [AC:U24159:U06847:M28366:M12911:M22941:M12910:M15313] [OR:Bacteriophage HP1] [DB:genpept-phg] [DE:Bacteriophage HP1 strain HP1c1, complete genome.] [NT:orf21] [LE:17028] [RE:17528] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_30271882_c3_618 715 4487 720 239 268 3.0e−23 Description gp:[GI:g490316] [LN:A02585] [AC:A02585] [GN:bioD] [OR:synthetic construct] [DB:genpept-pat] [DE:Synthetic (LORF1) bioD gene.] [LE:39] [RE:764] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_30272531_f2_228 716 4488 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_30351677_c3_598 717 4489 804 267 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_30742307_c2_572 718 4490 669 222 640 1.1e−62 Description pir:[LN:F69670] [AC:F69670] [PN:glycine betaine/carnitine/choline ABC transporter (membrane p) opuCD] [GN:opuCD] [CL:glycine betaine/carnitine/choline ABC transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2271392] [LN:AF009352] [AC:AF009352] [PN:transmembrane protein] [GN:opuCD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis osmoprotectant transport system OpuC including ATPase (opuCA), transmembrane protein (opuCB), osmoprotectant binding protein precursor (opuCC) and transmembrane protein (opuCD) genes, complete cds.] [NT:OpuCD; part of the osmoprotectant transport system] [LE:3627] [RE:4316] [DI:direct] >gp:[GI:e1186068:g2635893] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCD] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:yvbB] [LE:67059] [RE:67748] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_3125687_f1_114 719 4491 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_31287513_c1_464 720 4492 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_3163552_c3_597 721 4493 963 320 356 1.4e−32 Description gp:[GI:g3800819] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative membrane] [GN:opp-1B] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:1537] [RE:2472] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_3174187_f2_222 722 4494 330 109 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_32609682_f3_403 723 4495 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_32615677_c2_544 724 4496 1035 344 510 6.7e−49 Description pir:[LN:A69756] [AC:A69756] [PN:adhesion protein homolog ycdH] [GN:ycdH] [CL:adhesin B] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1023108:g2415736] [LN:AB000617] [AC:AB000617] [PN:YcdH] [GN:ycdH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 22 to 25 degree region, complete cds.] [NT:homologue of adhesion protein precursor of] [LE:21421] [RE:22380] [DI:direct] >gp:[GI:e1182237:g2632571] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ycdH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to adhesion protein] [LE:113236] [RE:114195] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_32755_f2_185 725 4497 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_33241562_f2_147 726 4498 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_33479716_c3_634 727 4499 1401 466 421 1.8e−39 Description gp:[GI:e1429016:g4753872] [LN:SCH10] [AC:AL049754] [PN:putative transmembrane efflux protein] [GN:SCH10.26c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid H10.] [NT:SCH10.26c, probable transmembrane efflux protein,] [LE:22729] [RE:24183] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34171927_c1_468 728 4500 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34277062_c3_602 729 4501 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34408552_f1_21 730 4502 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34429837_f1_39 731 4503 948 315 769 2.4e−76 Description sp:[LN:ARCL_ECOLI] [AC:Q46807] [GN:YQEA] [OR:ESCHERICHIA COLI] [DE:CARBAMATE KINASE-LIKE PROTEIN 1] [SP:Q46807] [DB:swissprot] >pir:[LN:B65071] [AC:B65071] [PN:hypothetical protein b2874] [CL:carbamate kinase] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g887824] [LN:ECU28375] [AC:U28375] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 genome; approximately 64 to 65 minutes.] [NT:ORF_o310] [LE:21276] [RE:22208] [DI:direct] >gp:[GI:g1789238] [LN:AE000370] [AC:AE000370:U00096] [PN:putative kinase] [GN:yqeA] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 260 of 400 of the complete genome.] [NT:o310; This 310 aa ORF is 45 pct identical (21 gaps)] [LE:11360] [RE:12292] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34631527_f1_109 732 4504 336 111 374 1.7e−34 Description gp:[GI:d1045996:g5360820] [LN:D86934] [AC:D86934] [PN:transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N026; putative] [LE:19527] [RE:19751] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34642135_c3_663 733 4505 246 81 79 0.020 Description gp:[GI:g488889] [LN:A12521] [AC:A12521] [PN:Acidic Basic Repeat Antigen Rhoptry (ABRA)] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-pat] [DE:Ag189 clone.] [LE:1:61] [RE:45:963] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_34657677_c3_615 734 4506 2994 997 2435 6.9e−253 Description gp:[GI:g4185565] [LN:AF115379] [AC:AF115379] [PN:surface protein Pls] [GN:pls] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus surface protein Pls (pls) gene, complete cds.] [NT:methicillin resistant; contains a DS repeat area] [LE:1] [RE:4914] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_35312766_f2_151 735 4507 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_35331905_c3_612 736 4508 318 105 81 0.012 Description gp:[GI:g5052610] [LN:AF145660] [AC:AF145660] [PN:BcDNA.GH10614] [GN:BcDNA.GH10614] [OR:Drosophila melanogaster] [SR:fruit fly] [DB:genpept-inv2] [DE:Drosophila melanogaster clone GH10614 BcDNA.GH10614 (BcDNA.GH10614) mRNA, complete cds.] [LE:14] [RE:964] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_36042152_c3_616 737 4509 3246 1081 2306 1.8e−251 Description gp:[GI:g4185565] [LN:AF115379] [AC:AF115379] [PN:surface protein Pls] [GN:pls] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus surface protein Pls (pls) gene, complete cds.] [NT:methicillin resistant; contains a DS repeat area] [LE:1] [RE:4914] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_31613752_f1_90 738 4510 1128 375 172 1.7e−10 Description sp:[LN:YPDA_BACSU] [AC:P50736] [GN:YPDA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 36.3 KD PROTEIN IN RECQ-CMK INTERGENIC REGION] [SP:P50736] [DB:swissprot] >pir:[LN:A69934] [AC:A69934] [PN:thioredoxin reductase homolog ypdA] [GN:ypdA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183740:g2634713] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypdA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [NT:similar to thioredoxin reductase] [SP:P50736] [LE:204681] [RE:205655] [DI:complement] >gp:[GI:e1185564:g2634730] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:ypdA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to thioredoxin reductase] [SP:P50736] [LE:4961] [RE:5935] [DI:complement] >gp:[GI:g1146207] [LN:BACSERA] [AC:L47648] [GN:ypdA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependent glycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:putative] [LE:10742] [RE:11716] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_36601703_c1_467 739 4511 939 312 406 7.0e−38 Description sp:[LN:APBE_TREPA] [AC:O83774] [GN:APBE:TP0796] [OR:TREPONEMA PALLIDUM] [DE:THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE PRECURSOR] [SP:O83774] [DB:swissprot] >pir:[LN:C71281] [AC:C71281] [PN:conserved hypothetical protein TP0796] [GN:TP0796] [CL:hypothetical protein HI0172] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3323101] [LN:AE001250] [AC:AE001250:AE000520] [PN:conserved hypothetical protein] [GN:TP0796] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 66 of 87 of the complete genome.] [NT:similar to GB:L42023 SP:P44550 PID:1003244] [LE:10082] [RE:11170] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_3939215_f2_247 740 4512 984 327 377 8.3e−35 Description gp:[GI:g2766193] [LN:SHU75349] [AC:U75349] [PN:periplasmic-iron-binding protein BhiC] [GN:bhi operon] [OR:Brachyspira hyodysenteriae] [DB:genpept-bct2] [DE:Serpulina hyodysenteriae bhi operon, complete sequence.] [LE:1674] [RE:2693] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_3948408_c3_655 741 4513 777 248 315 3.1e−28 Description sp:[LN:XYNC_CALSA] [AC:P23553] [GN:XYNC] [OR:CALDOCELLUM SACCHAROLYTICUM] [SR:,CALDICELLULOSIRUPTOR SACCHAROLYTICUS] [EC:3.1.—.—] [DE:ACETYL ESTERASE, (ACETYLXYLOSIDASE)] [SP:P23553] [DB:swissprot] >pir:[LN:B37202] [AC:B37202] [PN:acetylesterase, (XynC)] [OR:Caldocellum saccharolyticum] [EC:3.1.1.6] [DB:pir2] >gp:[GI:g144297] [LN:CDCXYNAB] [AC:M34459] [OR:Caldicellulosiruptor saccharolyticus] [SR:C. saccharolyticum DNA, clone pNZ1400] [DB:genpept-bct1] [DE:C. saccharolyticum xylanase A (XynA), beta-xylosidase (XynB) andacetyl esterase (XynC) genes, complete cds.] [NT:acetyl esterase (XynC)] [LE:1257] [RE:2057] [DI:direct] >gp:[GI:g2645420] [LN:AF005383] [AC:AF005383] [PN:acetylxylosidase] [GN:XynC] [OR:Caldicellulosiruptor saccharolyticus] [DB:genpept-bct2] [DE:Caldicellulosiruptor saccharolyticus putative transport protein (XynG), putative transport protein (XynH), xylanase (XynF), xylanase (XynE), xylanase (XynD), xylanase (XynA), acetylxylosidase (XynC) and xylanase (XynB) genes, complete cds.] [LE:13673] [RE:14473] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4062925_f2_246 742 4514 393 130 103 7.8e−07 Description gp:[GI:g2072447] [LN:LLU93364] [AC:U93364] [PN:EpsJ] [GN:epsJ] [OR:Lactococcus lactis subsp. cremoris] [DB:genpept-bct2] [DE:Lactococcus lactis cremoris plasmid pNZ4000 insertion sequence IS982 putative transposase gene and eps gene cluster (epsRXABCDEFGHIJKL), complete cds.] [LE:10209] [RE:11399] [DI:direct] >gp:[GI:g2072447] [LN:AF036485] [AC:AF036485:AF036486:AF036487:U93364] [PN:EpsJ] [GN:epsJ] [OR:Plasmid pNZ4000] [DB:genpept] [DE:Plasmid pNZ4000, complete sequence.] [LE:16729] [RE:17919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4072680_f1_75 743 4515 774 257 311 8.2e−28 Description pir:[LN:A70039] [AC:A70039] [PN:ABC transporter (ATP-binding protein) homolog yvfR] [GN:yvfR] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186097:g2635922] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvfR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:97865] [RE:98770] [DI:complement] >gp:[GI:e313073:g1945718] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvfR] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:probable ABC transporter] [LE:82901] [RE:83806] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4079382_f3_313 744 4516 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4094052_f3_330 745 4517 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4098385_f1_115 746 4518 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4101063_f1_113 747 4519 396 131 88 0.022 Description pir:[LN:T02638] [AC:T02638] [PN:G2 protein homolog] [GN:g2] [OR:Dictyostelium discoideum] [DB:pir2] >gp:[GI:g3068587] [LN:AF000580] [AC:AF000580] [PN:G2-like] [GN:g2] [OR:Dictyostelium discoideum] [DB:genpept-inv1] [DE:Dictyostelium discoideum plasmid Ddp5, complete genome.] [NT:similar to plasmid Ddp1. g2/g3/d4 protein; possible] [LE:11232] [RE:12167] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4101640_c2_545 748 4520 3054 1017 680 1.9e−66 Description sp:[LN:YQIG_BACSU] [AC:P54524] [GN:YQIG] [OR:BACILLUS SUBTILIS] [EC:1.—.—.—] [DE:PROBABLE NADH-DEPENDENT FLAVIN OXIDOREDUCTASE YQIG,] [SP:P54524] [DB:swissprot] >pir:[LN:C69961] [AC:C69961] [PN:NADH-dependent flavin oxidoreductase homolog yqiG] [GN:yqiG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013261:g1303926] [LN:BACJH642] [AC:D84432:D82370] [PN:YqiG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:202096] [RE:203214] [DI:complement] >gp:[GI:e1185689:g2634855] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqiG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to NADH-dependent flavin oxidoreductase] [SP:P54524] [LE:120407] [RE:121525] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4705053_c2_536 749 4521 1221 406 454 5.8e−43 Description sp:[LN:BIOF_HAEIN] [AC:P44422] [GN:BIOF:HI1553] [OR:HAEMOPHILUS INFLUENZAE] [EC:2.3.1.47] [DE:LIGASE)] [SP:P44422] [DB:swissprot] >pir:[LN:D64129] [AC:D64129] [PN:8-amino-7-oxononanoate synthase homolog] [CL:5-aminolevulinate synthase] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1574397] [LN:U32830] [AC:U32830:L42023] [PN:8-amino-7-oxononanoate synthase (bioF)] [GN:HI1553] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 145 of 163 of the complete genome.] [NT:similar to SP:P53556 PID:1277027 PID:2293185] [LE:7529] [RE:8671] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4722131_f2_268 750 4522 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4765_f2_245 751 4523 321 106 90 0.0025 Description gp:[GI:g5306152] [LN:AF160864] [AC:AF160864] [PN:haem lyase] [GN:yejR] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:ATA initiation codon; ATG codon 128 nt downstream] [LE:18212] [RE:19750] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4773518_c3_664 752 4524 885 294 563 1.6e−54 Description gp:[GI:e312302:g1944618] [LN:SEGAPLPP] [AC:Y12602] [PN:acid phosphatase] [GN:lppC] [FN:cell membrane lipoprotein] [OR:Streptococcus equisimilis] [DB:genpept-bct1] [DE:Streptococcus equisimilis gapC and lppC genes.] [LE:1390] [RE:2247] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4782963_c1_460 753 4525 1365 454 1105 6.0e−112 Description pir:[LN:B70316] [AC:B70316] [PN:DAPA aminotransferase] [GN:bioA] [CL:beta-alanine--pyruvate transaminase] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2982887] [LN:AE000676] [AC:AE000676:AE000657] [PN:DAPA aminotransferase] [GN:bioA] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 8 of 109 of the complete genome.] [LE:10739] [RE:12100] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4797177_c2_566 754 4526 588 195 308 1.7e−27 Description gp:[GI:d1011096:g1001205] [LN:SYCSLLE] [AC:D64003:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 22/27, 2755703–2868766.] [NT:ORF_ID:slr0895] [LE:7468] [RE:8031] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4798202_c3_623 755 4527 816 271 103 0.023 Description pir:[LN:B71605] [AC:B71605] [PN:hypothetical protein PFB0850c] [GN:PFB0850c] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845292] [LN:AE001420] [AC:AE001420:AE001362] [PN:hypothetical protein] [GN:PFB0850c] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 57 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:11963] [RE:14386] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4800077_f3_350 756 4528 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4859628_c3_603 757 4529 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4867842_c3_652 758 4530 978 325 486 2.3e−46 Description pir:[LN:E69400] [AC:E69400] [PN:3-hydroxyacyl-CoA dehydrogenase (hbd-8) homolog] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649379] [LN:AE001021] [AC:AE001021:AE000782] [PN:3-hydroxyacyl-CoA dehydrogenase (hbd-8)] [GN:AF1206] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 86 of 172 of the complete genome.] [NT:similar to PID:1055222 SP:P52041 percent identity:] [LE:9126] [RE:10073] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4884812_f3_314 759 4531 1257 418 579 1.1e−78 Description gp:[GI:e1358508:g3980137] [LN:LMO34616] [AC:AJ007319] [PN:succinyl-diaminopimelate desuccinylase] [GN:dapE] [OR:Listeria monocytogenes] [DB:genpept-bct1] [DE:Listeria monocytogenes ascB, inlG, inlH, inlE, dapE genes.] [LE:5533] [RE:6672] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4895061_c2_561 760 4532 2271 756 2671 6.8e−278 Description pir:[LN:S01788] [AC:S01788:B32305:F64829] [PN:formate C-acetyltransferase, 1:pyruvate formate-lyase I] [GN:pflB:pfl] [CL:formate C-acetyltransferase 1:glycyl radical homology] [OR:Escherichia coli] [EC:2.3.1.54] [DB:pir1] [MP:20.5] >gp:[GI:d1036624:g1651427] [LN:D90728] [AC:D90728:AB001340] [PN:Formate c-acetyltransferase (EC 2.3.1.54).] [GN:pfl] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone:Kohara clone #216] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (20.4–20.8 min).] [NT:ORF_ID:o216#7; similar to PIR Accession Number] [LE:6965] [RE:9247] [DI:complement] >gp:[GI:g42370] [LN:ECPFL] [AC:X08035] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E. coli pfl gene for pyruvate formate-lyase (EC 2.3.1.54).] [NT:pyruvate formate-lyase (AA 1–760)] [SP:P09373] [LE:101] [RE:2383] [DI:direct] >gp:[GI:g1787131] [LN:AE000192] [AC:AE000192:U00096] [PN:formate acetyltransferase 1] [GN:pflB] [FN:enzyme; Energy metabolism, carbon:Anaerobic] [OR:Escherichia coli] [DB:genpept-bct2] [EC:2.3.1.54] [DE:Escherichia coli K-12 MG1655 section 82 of 400 of the complete genome.] [NT:f760; 100 pct identical to PFLB_ECOLI SW:P09373] [LE:5588] [RE:7870] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_4974091_c2_569 761 4533 504 167 93 0.00087 Description pir:[LN:B71359] [AC:B71359] [PN:conserved hypothetical protein TP0156] [GN:TP0156] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322423] [LN:AE001200] [AC:AE001200:AE000520] [PN:conserved hypothetical protein] [GN:TP0156] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 16 of 87 of the complete genome.] [NT:similar to GB:L42023 SP:P44679 PID:1003656] [LE:2984] [RE:3388] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_505301_f3_345 762 4534 291 96 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_5109785_c3_670 763 4535 255 84 76 0.010 Description gp:[GI:g4103231] [LN:AF021085] [AC:AF021085] [PN:cytochrome b] [GN:cytb] [OR:Mitochondrion Edaphus sp.] [SR:Edaphus sp] [DB:genpept-inv2] [DE:Edaphus sp. cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds.] [LE:<1] [RE:>465] DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_5113413_c3_653 764 4536 642 213 579 3.3e−56 Description pir:[LN:D69670] [AC:D69670] [PN:glycine betaine/carnitine/choline ABC transporter (membrane p) opuCB] [GN:opuCB] [CL:glycine betaine/carnitine/choline ABC transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2271390] [LN:AF009352] [AC:AF009352] [PN:transmembrane protein] [GN:opuCB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis osmoprotectant transport system OpuC including ATPase (opuCA), transmembrane protein (opuCB), osmoprotectant binding protein precursor (opuCC) and transmembrane protein (opuCD) genes, complete cds.] [NT:OpuCB; part of the osmoprotectant transport system] [LE:2025] [RE:2678] [DI:direct] >gp:[GI:e1186070:g2635895] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCB] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:yvbD] [LE:68697] [RE:69350] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_5160925_c1_443 765 4537 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_5189037_c3_620 766 4538 711 236 351 4.7e−32 Description pir:IILN:H64461] [AC:H64461] [PN:6-carboxyhexanoate--CoA ligase,] [CL:6-carboxyhexanoate--CoA ligase bioW] [OR:Methanococcus jannaschii] [EC:6.2.1.14] [DB:pir2] [MP:FOR1244632-1245345] >gp:[GI:g1591935] [LN:U67570] [AC:U67570:L77117] [PN:6-carboxyhexanoate-CoA ligase (bioW)] [GN:MJ1297] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 112 of 150 of the complete genome.] [NT:similar to GB:M29291 SP:P22822 PID:142594 percent] [LE:6098] [RE:6811] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_5860630_c2_564 767 4539 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_6056567_c1_490 768 4540 579 192 320 9.1e−29 Description pir:[LN:D64866] [AC:D64866] [PN:hypothetical protein b1199] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1787449] [LN:AE000218] [AC:AE000218:U00096] [PN:putative dihydroxyacetone kinase (EC 2.7.1.2)] [GN:b1199] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 108 of 400 of the complete genome.] [NT:f210; 30 pct identical (16 gaps) to 181 residues] [LE:4528] [RE:5160] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_625262_c1_430 769 4541 228 75 54 0.013 Description gp:[GI:g765037] [LN:DROMTTRND] [AC:M18022] [PN:NADH dehydrogenase subunit 2] [OR:Mitochondrion Drosophila melanogaster] [SR:fruit fly] [DB:genpept-inv2] [DE:D. melanogaster Trp-tRNA, Cys-tRNA, Tyr-tRNA, NADH dehydrogenase subunit 2 (3′ end) cytochrome oxidase subunit 1 (5′ end) genes.] [LE:<1] [RE:462] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_6302217_c3_638 770 4542 948 315 1335 2.5e−136 Description gp:[GI:g3800819] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative membrane] [GN:opp-1B] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:1537] [RE:2472] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_6725817_c3_658 771 4543 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_7072825_c1_435 772 4544 774 257 459 1.7e−43 Description gp:[GI:g4980796] [LN:AE001711] [AC:AE001711:AE000512] [PN:oxidoreductase, short chain] [GN:TM0297] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 23 of 136 of the complete genome.] [NT:similar to SP:P50167 PID:763164 percent identity:] [LE:7161] [RE:7934] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_800300_c1_458 773 4545 585 194 313 5.0e−28 Description pir:[LN:S23693] [AC:S23693] [PN:erythrocyte membrane-associated antigen (clone pPf K19)] [OR:Plasmodium falciparum] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_814140_c1_437 774 4546 1422 473 1168 1.3e−118 Description sp:[LN:UHPT_ECOLI] [AC:P13408:P76727] [GN:UHPT] [OR:ESCHERICHIA COLI] [DE:HEXOSE PHOSPHATE TRANSPORT PROTEIN] [SP:P13408:P76727] [DB:swissprot] >pir:[LN:MMECHP] [AC:A30395:H41853:C65168:Q00500:S30079] [PN:hexose phosphate transport protein uhpT] [GN:uhpT] [CL:hexose phosphate transport protein uhpT] [OR:Escherichia coli] [DB:pir1] [MP:82 min] >gp:[GI:g148115] [LN:ECOUHP] [AC:M17102] [OR:Escherichia coli] [SR:E. coli DNA, clone pRJK10] [DB:genpept-bct1] [DE:E. coli uhp operon encoding UhpA, UhpB, UhpC, and UhpT protein, (encoding hexose phosphate transport protein), complete cds, and anilvBN operon encoded protein, 3′ end.] [NT:hexose phosphate transport protein UhpT] [LE:3722] [RE:5113] [DI:direct] >gp:[GI:g148120] [LN:ECOUHPABCT] [AC:M89479] [PN:hexosephosphate transport protein] [GN:uhpT] [OR:Escherichia coli] [SR:Escherichia coli DNA] [DB:genpept-bct1] [DE:Escherichia coli uhpABCT operon encoding hexosephosphateutilization protein (uhpA) gene, complete cds, and hexosephosphate transport protein (uhpB, uhpC, uhpT) genes, complete cds.] [LE:3722] [RE:5113] [DI:direct] >gp:[GI:g2367259] [LN:AE000444] [AC:AE000444:U00096] [PN:hexose phosphate transport protein] [GN:uhpT] [FN:transport; Transport of small molecules:] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 334 of 400 of the complete genome.] [NT:f463; 99 pct identical amino acid sequence and] [LE:5590] [RE:6981] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_81525_f3_398 775 4547 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_816878_c3_637 776 4548 1632 543 2188 1.0e−226 Description gp:[GI:g3800818] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative substrate] [GN:opp-1A] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:64] [RE:1524] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_822150_f2_262 777 4549 516 171 89 0.028 Description gp:[GI:d1006984:g567946] [LN:PXMTGBP] [AC:D30753] [PN:21K protein] [FN:Presumably cell to cell movement] [OR:Potato mop-top virus] [SR:Potato mop-top virus (individual_isolate Todd) (library:Tb2-1] [DB:genpept-vrl] [DE:Potato mop-top virus RNA for 51K protein, 13K protein, 21K protein and 8K protein, complete cds.] [NT:putative] [LE:1961] [RE:2533] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_875765_c2_525 778 4550 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_969157_c1_420 779 4551 1026 341 220 8.5e−16 Description gp:[GI:g3800818] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative substrate] [GN:opp-1A] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:64] [RE:1524] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_9806718_c1_474 780 4552 762 253 862 3.4e−86 Description gp:[GI:g3800822] [LN:AF076683] [AC:AF076683] [PN:oligopeptide transporter putative ATPase domain] [GN:opp-1F] [OR:Staphylococcus aureus] (DB:genpept-bct2] [DE:Staphylococcus aureus oligopeptide transporter putative substrate binding domain (opp-1A), oligopeptide transporter putative membrane permease domain (opp-1B), oligopeptide transporter putative membrane permease domain (opp-1C), oligopeptide transporter putative ATPase domain (opp-1D), and oligopeptide transporter putative ATPase domain (opp-1F) genes, complete cds; and unknown gene.] [LE:4137] [RE:4892] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_984686_c1_478 781 4553 1221 406 1172 4.8e−119 Description pir:[LN:C69670] [AC:C69670] [PN:glycine betaine/carnitine/choline ABC transporter (ATP-binding) opuCA] [GN:opuCA] [CL:glycine betaine/proline transport protein proV:ATP-binding cassette homology:CBS homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2271389] [LN:AF009352] [AC:AF009352] [PN:ATPase] [GN:opuCA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis osmoprotectant transport system OpuC including ATPase (opuCA), transmembrane protein (opuCB), osmoprotectant binding protein precursor (opuCC) and transmembrane protein (opuCD) genes, complete cds.] [NT:OpuCA; part of the osmoprotectant transport system) [LE:860] [RE:2002] [DI:direct] >gp:[GI:e1186071:g2635896] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCA] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name: yvbE] [LE:69373] [RE:70515] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_9970167_f3_393 782 4554 861 286 219 2.9e−25 Description pir:[LN:E69796] [AC:E69796] [PN:two-component response regulator [YesM] homolog yesN] [GN:yesN] [CL:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182675:g2633009] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yesN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to two-component response regulator [YesM]] [LE:159260] [RE:160366] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000984_9973515_c1_495 783 4555 261 86 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10000183_c3_2061 784 4556 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10034627_f3_956 785 4557 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10195252_f2_807 786 4558 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10203501_c2_1757 787 4559 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10241433_c1_1640 788 4560 126 41 104 1.4e−05 Description sp:[LN:YDGI_BACSU] [AC:P96707] [GN:YDGI] [OR:BACILLUS SUBTILIS] [EC:1.—.—.—] [DE:PUTATIVE NAD(P)H NITROREDUCTASE YDGI,] [SP:P96707] [DB:swissprot] >pir:LN:C69783] [AC:C69783] [PN:NADH dehydrogenase homolog ydgI] [GN:ydgI] [CL:nitroreductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020152:g1881372] [LN:AB001488] [AC:AB001488] [GN:ydgI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:SIMILAR TO NITROREDUCTASE.] [LE:145410] [RE:146039] [DI:complement] >gp:[GI:e1182545:g2632879] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.) [NT:similar to NADH dehydrogenase] [SP:P96707] [LE:11206] [RE:11835] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10332262_f1_254 789 4561 366 121 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1046885_f1_82 790 4562 2217 738 1356 1.5e−138 Description gp:[GI:e245927:g2462047] [LN:ACRBDOXN] [AC:Z46863] [PN:polyphosphate kinase] [GN:ppk] [OR:Acinetobacter sp. ADP1] [DB:genpept-bct1] [DE:Acinetobacter sp. cysD, cobQ, sodM, lysS, rubA, rubB, estB, oxyR, ppk, mtgA, ORF2 and ORF3 genes.] [NT:putative; transcription of ppk is induced by] [LE:9244] [RE:11319] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10585432_c1_1539 791 4563 591 196 171 2.3e−18 Description sp:[LN:GGT_BACSU] [AC:P54422] [GN:GGT] [OR:BACILLUS SUBTILIS] [EC:2.3.2.2] [DE:GAMMA-GLUTANYLTRANSPEPTIDASE PRECURSOR,] [SP:P54422] [DB:swissprot] >pir:[LN:F69631] [AC:F69631:JC5867:PC4504] [PN:gamma-glutamyltransferase, precursor:gamma glutamyl transpeptidase] [GN:ggt] [CL:gamma-glutamyltransferase] [OR:Bacillus subtilis] [EC:2.3.2.2] [DB:pir2] >gp:[GI:e1183499:g2634224] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:gamma-glutamyltranspeptidase] [GN:ggt] [FN:glutathione metabolism] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.2.2] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:alternate gene name:pac] [SP:P54422] [LE:222733] [RE:224496] [DI:direct] >gp:[GI:e1185314:g2634235] [LN:BSUB0011] [AC:Z99114:AL009126] PN:gamma-glutamyltranspeptidase] [GN:ggt] [FN:glutathione metabolism] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.2.2] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] [NT:alternate gene name:pac] [SP:P54422] [LE:3763] [RE:5526] [DI:direct] >gp:[GI:g1491813] [LN:BSU49358] [AC:U49358] [PN:gamma-glutamyltranspeptidase] [GN:ggt] [OR:Bacillus subtilis] [SR:Bacillus subtilis strain = JH642] [DB:genpept-bct2] [DE:Bacillus subtilis gamma-glutamyltranspeptidase (ggt) gene, complete cds.] [LE:250] [RE:2013] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10600010_c2_1931 792 4564 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10601625_c3_2039 793 4565 231 76 55 0.0050 Description gp:[GI:e1286089:g3036830] [LN:CJAJ0856] [AC:AJ000856] [PN:ABC transporter protein] [GN:kpsM] [OR:Campylobacter jejuni] [DB:genpept-bct1] [DE:Campylobacter jejuni kpsM, kpsT genes.] [LE:134] [RE:916] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10605337_c2_1945 794 4566 747 248 706 1.1e−69 Description gp:[GI:g666983] [LN:BSPAAT] [AC:X77636] [PN:putative ATP binding subunit] [GN:ORF3] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis putative amino acid transporter gene.] [NT:potential ABC-transport system] [SP:P39456] [LE:1627] [RE:2370] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1063552_f3_982 795 4567 390 129 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1064050_f2_826 796 4568 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10657827_c1_1607 797 4569 1401 466 393 1.7e−36 Description gp:[GI:e304997:g2294506] [LN:A37836] [AC:A37836] [OR:Streptomyces pristinaespiralis] [DB:genpept-pat] [DE:Sequence 6 from Patent WO9408014.] [NT:unnamed protein product] [LE:103] [RE:1689] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10667002_c2_1653 798 4570 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10667003_f1_29 799 4571 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10718762_f1_204 800 4572 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10736312_c1_1452 801 4573 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1074177_c2_1838 802 4574 825 274 417 4.8e−39 Description pir:[LN:F64819] [AC:F64819] [PN:hypothetical protein b0822] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1036489:g4062389] [LN:D90719] [AC:D90719:AB001340] [PN:Hypothetical protein 1] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone:Kohara clone #206] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (18.2–18.6 min).] [NT:ORF_ID:o207#5; similar to PIR Accession Number] [LE:13745] [RE:14560] [DI:complement] >gp:[GI:d1036496:g4062396] [LN:D90720] [AC:D90720:AB001340] [PN:Hypothetical protein 1] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone:Kohara clone #207] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (18.4–18.8 min).] [NT:ORF_ID:o207#5; similar to PIR Accession Number] [LE:5774] [RE:6589] [DI:complement] >gp:[GI:g1787043] [LN:AE000184] [AC:AE000184:U00096] [PN:orf, hypothetical protein] [GN:b0822] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 74 of 400 of the complete genome.] [NT:f271; This 271 aa ORF is 24 pct identical (16 gaps)] [LE:6609] [RE:7424] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10756925_f1_228 803 4575 1566 521 793 6.9e−70 Description gp:[GI:d1020925:g2116759] [LN:D86418] [AC:D86418] [PN:YfnA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 69–70 degree region, partial sequence.] [LE:7539] [RE:8927] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10938903_f1_322 804 4576 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10954127_f3_1025 805 4577 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10973385_c3_2080 806 4578 312 103 80 0.010 Description gp:[GI:g4731918] [LN:AF111944] [AC:AF111944] [PN:development protein DG1122] [GN:DG1122] [OR:Dictyostelium discoideum] [DB:genpept-inv2] [DE:Dictyostelium discoideum AX4 development protein DG1122 (DG1122) gene, partial cds.] [LE:207:829] [RE:744:>1036] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI750300985_11063801_f1_381 807 4579 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11132010_c1_1519 808 4580 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_115761_c3_2118 809 4581 1458 485 799 1.6e−79 Description pir:[LN:S77243] [AC:S77243] [PN:hypothetical protein slr1363] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1018310:g1652657] [LN:D90907] [AC:D90907:AB001339] [PN:hypothetical protein] [GN:glgP] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 9/27, 1056467–1188885.] [NT:ORF_ID:slr1363] [LE:49200] [RE:50702] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_117150_f1_173 810 4582 1311 436 1525 1.9e−156 Description gp:[GI:g4096796] [LN:SCU40157] [AC:U40157] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus condensing-enzyme-like protein (orf1) and SpoVE-like protein (orf2) genes, complete cds.] [NT:orf1; unknown function; similar to] [LE:193] [RE:1362] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1173130_c1_1530 811 4583 2091 696 2666 2.3e−277 Description pir:[LN:S46952] [AC:S46952:S63605] [PN:phosphotransferase system enzyme II,, glucose-specific, factor IIA:glucose permease:phosphoenolpyruvate:glucose phosphotransferase system enzyme II, glucose-specific:phosphotransferase system enzyme II, glucose-specific, factor 1:protein-Npi-phosphohistidine--sugar phosphotransferase, glucose-specific, factor II] [GN:glcA:ptsG] [CL:phosphotransferase system N-acetylglucosamine-specific enzyme II:phosphotransferase system glucose-specific enzyme II, factor II homology:phosphotransferase system glucose-specific enzyme II, factor III homology] [OR:Staphylococcus carnosus] [EC:2.7.1.69] [DB:pir1] >gp:[GI:g1072418] [LN:SCGLCAB] [AC:X93360:X80415] [GN:glcA] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:S. carnosus glcA gene and glcB gene.] [LE:540] [RE:2567] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11756543_f2_497 812 4584 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1178593_f3_990 813 4585 1590 529 1527 1.1e−156 Description pir:[LN:C69794] [AC:C69794] [PN:glutamate synthase (ferredoxin) homolog yerD] [GN:yerD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182639:g2632973] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to glutamate synthase (ferredoxin)] [LE:115586] [RE:117163] [DI:complement] >gp:[GI:e1167974:g2577963] [LN:BSYERABCD] [AC:Y15254] [PN:YerD protein] [GN:yerD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 13 kB DNA fragment, from yerA to sapB gene.] [NT:similar to plectonema boryanum large subunit of] [LE:3231] [RE:4808] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1180292_c1_1536 814 4586 1164 387 1050 4.0e−106 Description pir:[LN:F70069] [AC:F70069] [PN:capsular polyglutamate biosynthesis homolog ywsC] [GN:ywsC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184496:g2636115] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywsC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to capsular polyglutamate biosynthesis] [LE:101413] [RE:102594] [DI:complement] >gp:[GI:e1184496:g2636115] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywsC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to capsular polyglutamate biosynthesis] [LE:101413] [RE:102594] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11855463_c3_2075 815 4587 747 248 791 1.1e−78 Description pir:[LN:H69611] [AC:H69611] [PN:3′-phosphoadenosine 5′-phosphosulfate reductase, cysH:3′-phosphoadenylylsulfate reductase, thioredoxin dependent: PAPS reductase:PAPS sulfotransferase] [GN:cysH] [OR:Bacillus subtilis] [EC:1.8.99.4] [DB:pir2] >gp:[GI:e332183:g2462956] [LN:BSPYREYLO] [AC:AJ000974] [PN:putative phospho-adenylylsulphate] [GN:cysH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis pyrE to yloA gene region.] [LE:548] [RE:1249] [DI:direct] >gp:[GI:e1185149:g2633930] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:phosphoadenosine phosphosulfate] [GN:cysH] [FN:cysteine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.8.99.4] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [LE:31361] [RE:32062] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11881630_f2_658 816 4588 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11886592_c2_1671 817 4589 654 217 481 8.0e−46 Description Sp:[LN:HIS2_HAEIN] [AC:P44434] [GN:HISI:HISIE:HI0475] [OR:HAEMOPHILUS INFLUENZAE] [EC:3.5.4.19:3.6.1.31] [DE:PYROPHOSPHOHYDROLASE,] [SP:P44434] [DB:swissprot] >pir:[LN:A64071] [AC:A64071] [PN:phosphoribosyl-AMP cyclohydrolase, / phosphoribosyl-ATP pyrophosphatase,] [CL:hisI bifunctional enzyme:hisI bifunctional enzyme homology:hisI protein homology] [OR:Haemophilus influenzae] [EC:3.5.4.19:3.6.1.31] [DB:pir2] >gp:[GI:g1573454] [LN:U32730] [AC:U32730:L42023] [PN:phosphoribosyl-AMP cyclohydrolase /] [GN:HI0475] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 45 of 163 of the complete genome.] [NT:similar to SP:P06989 GB:D43637 GB:U02072 GB:X03974] [LE:4576] [RE:5241] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11955127_f1_420 818 4590 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_119633_f1_70 819 4591 1389 462 494 3.3e−47 Description pir:[LN:B69680] [AC:B69680:140510] [PN:para-nitrobenzyl esterase,] [GN:pnbA] [CL:cholinesterase homology] [OR:Bacillus subtilis] [EC:3.1.1.—] [DB:pir2] >gp:[GI:g1762126] [LN:BSU46134] [AC:U46134] [PN:intracellular esterase B] [GN:estB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.1.1] [DE:Bacillus subtilis putative orf1 unknown protein, putative transcriptional regulator (slr), and intracellular esterase B (estB) genes, complete cds.] [NT:EstB; esterase of the serine-hydrolase family] [LE:1035] [RE:2504] [DI:direct] >gp:[GI:e1186127:g2635952] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:para-nitrobenzyl esterase (intracellular] [GN:pnbA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.1.1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name: estB] [LE:130145] [RE:131614] [DI:direct] >gp:[GI:e238702:g1495277] [LN:BSYVEFGNS] [AC:Z71928] [PN:para-nitrobenzyl esterase] [GN:pnbA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis pnbA, sigL, yve[J, K, L, M, N, O, P, Q, R, S, T] and yvf[A, B, C, D, E, F, G, H] genes.] [LE:132] [RE:1601] [DI:complement] >gp:[GI:e313129:g1945688] [LN:BSZ94043] [AC:Z94043] [PN:para-nitrobenzyl esterase] [GN:pnbA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [LE:50057] [RE:51526] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1207287_c2_1669 820 4592 621 206 365 1.6e−33 Description sp:[LN:HIS1_LACLA] [AC:Q02129] [GN:HISG] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:2.4.2.17] [DE:ATP PHOSPHORIBOSYLTRANSFERASE,] [SP:Q02129] [DB:swissprot] >pir:[LN:D45734] [AC:D45734] [PN:HisG] [OR:Lactococcus lactis subsp. lactis] [DB:pir2] >gp:[GI:g2565141] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:HisG] [GN:hisG] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:phosphoribosyl-ATP synthetase] [LE:3125] [RE:3751] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1207938_c3_2244 821 4593 828 275 953 7.7e−96 Description gp:[GI:g4433636] [LN:AF029224] [AC:AF029224:AF029225] [PN:NirC] [GN:nirC] [FN:putative nitrite transporter] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [LE:226] [RE:1056] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1230437_c1_1528 822 4594 408 135 202 2.9e−16 Description sp:[LN:YWBH_BACSU] [AC:P39591] [GN:YWBH:IPA-23R] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 14.3 KD PROTEIN IN EPR-GALK INTERGENIC REGION] [SP:P39591] [DB:swissprot] >pir:[LN:S39678] [AC:S39678:F70051] [PN:ywbH protein:hypothetical protein ipa-23r] [GN:ywbH] [CL:conserved hypothetical protein HI1297] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413947] [LN:BSGENR] [AC:X73124] [GN:ipa-23r] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39591] [LE:23968] [RE:24354] [DI:complement] >gp:[GI:e1186331:g2636367] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywbH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:alternate gene name:ipa-23r] [SP:P39591] [LE:133605] [RE:133991] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_12600305_f1_260 823 4595 285 94 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_12690706_c3_2230 824 4596 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_12697136_f2_862 825 4597 873 290 1519 8.1e−156 Description pir:[LN:S77609] [AC:S77609] [PN:probable intercellular adhesion protein B precursor:icaB protein] [GN:icaB] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g1161381] [LN:SEU43366] [AC:U43366] [PN:IcaB] [GN:icaB] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis operon mediating intercellular adhesion:IcaR, IcaA, IcaD, IcaB, and IcaC genes, complete cds.] [LE:2265] [RE:3134] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_12698410_f3_1111 826 4598 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_127002_f1_259 827 4599 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1281627_c3_2201 828 4600 1293 430 1106 4.7e−112 Description pir:[LN:B69876] [AC:B69876] [PN:acetylornithine deacetylase homolog ylmB] [GN:ylmB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185127:g2633908] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylmB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to acetylornithine deacetylase] [LE:8531] [RE:9811] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_129678_f1_53 829 4601 1416 471 1269 2.5e−129 Description sp:[LN:YDGF_BACSU] [AC:P96704] [GN:YDGF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL TRANSPORT PROTEIN IN EXPZ-DINB INTERGENIC REGION] [SP:P96704] [DB:swissprot] >pir:[LN:H69782] [AC:H69782] [PN:amino acid ABC transporter (permease) homolog ydgF] [GN:ydgF] [CL:arginine permease] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020148:g1881368] [LN:AB001488] [AC:AB001488] [GN:ydgF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE AMINO ACID TRANSPORT PERMIASE.] [LE:139917] [RE:141293] [DI:complement] >gp:[GI:e1182528:g2632862] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydgF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to amino acid ABC transporter (permease)] [SP:P96704] [LE:203663] [RE:205039] [DI:complement] >gp:[GI:e1182541:g2632875] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to amino acid ABC transporter (permease)] [SP:P96704] [LE:5713] [RE:7089] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1298202_f2_822 830 4602 1986 661 1779 2.3e−183 Description pir:[LN:G69848] [AC:G69848] PN:fructose phosphotransferase system enzyme homolog yjdD] [GN:yjdD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183221:g2633555] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjdD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to fructose phosphotransferase system] [LE:77806] [RE:79575] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13089052_c3_2246 831 4603 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1350051_c3_2086 832 4604 915 304 1245 8.7e−127 Description gp:[GI:g4574118] [LN:AF009415] [AC:AF009415] [PN:choline transporter] [GN:cudT] [OR:Staphylococcus xylosus] [DB:genpept-bct2] [DE:Staphylococcus xylosus choline transporter (cudT), putative regulatory protein (cudC), glycine betaine aldehyde dehydrogenase (cudA), and choline dehydrogenase (cudB) genes, complete cds.] [NT:CudT] [LE:811] [RE:2433] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1351687_c1_1515 833 4605 906 301 739 3.6e−73 Description gp:[GI:g1644433] [LN:SAU31175] [AC:U31175] [PN:D-specific D-2-hydroxyacid dehydrogenase] [GN:ddh] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus D-specific D-2-hydroxyacid dehydrogenase (ddh) gene, complete cds.] [NT:36.7 kDa protein; similar to NAD+-linked D-LDH,] [LE:259] [RE:1251] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1359635_f3_1248 834 4606 471 156 297 2.5e−26 Description pir:[LN:F69870] [AC:F69870] [PN:general stress protein homolog ykzA] [GN:ykzA] [CL:hypothetical protein yklA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181516:g2632036] [LN:BSAJ2571] [AC:AJ002571] [PN:YknA] [GN:yknA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [NT:homologous to OsmC from Escherichia coli] [LE:34145] [RE:34555] [DI:direct] >gp:[GI:e1183336:g2633670] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykzA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:alternate gene name:yzzE; similar to general] [LE:187094] [RE:187504] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1366012_f1_356 835 4607 213 70 81 0.014 Description sp:[LN:PF2R_HUMAN] [AC:P43088] [GN:PTGFR] [OR:HOMO SAPIENS] [SR:,HUMAN] [DE:RECEPTOR] (PGF2 ALPHA RECEPTOR)] [SP:P43088] [DB:swissprot] >pir:[LN:A49973] [AC:A49973] [PN:prostanoid FP receptor] [GN:PTGFR:FP] [CL:prostaglandin E receptor EP1] [OR:Homo sapiens] [SR:, man] [DB:pir2] [MP:1p31.1-1p31.1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13678300_f1_40 836 4608 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13711588_f2_551 837 4609 285 94 81 0.0019 Description pir:[LN:S53365] [AC:S53365] [PN:mucin 5AC (clone CEL2)] [GN:MUC5AC] [OR:Homo sapiens] [SR:, man] [DB:pir2] [MP:11p15.5-11p15.5] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1376926_c3_2008 838 4610 849 282 438 2.9e−41 Description gp:[GI:g3127079] [LN:AF061070] [AC:AF061070] [PN:PtxC] [GN:ptxC] [OR:Pseudomonas stutzeri] [DB:genpept-bct2] [DE:Pseudomonas stutzeri Orf117 (orf117), Orf86 (orf86) genes, complete cds; and ptXABCDE operon, partial sequence.] [NT:putative inner membrane component of] [LE:3217] [RE:4044] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13796876_f2_710 839 4611 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13835462_c3_2043 840 4612 1449 482 1386 1.0e−141 Description gp:[GI:e1299584:g3687418] [LN:BLY17554] [AC:Y17554] [PN:permease] [GN:arcD] [OR:Bacillus licheniformis] [DB:genpept-bct1] [DE:Bacillus licheniformis arcA, arcB, arcC and arcD genes.] [LE:2579] [RE:3985] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13843910_c1_1637 841 4613 216 71 258 3.9e−22 Description gp:[GI:e1429613:g4756156] [LN:A67169] [AC:A67169] [PN:NART GENE] [FN:NITRATE TRANSPORT] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 9 from Patent EP0805205.] [LE:538] [RE:1704] [DI:direct] >gp:[GI:g2529402] [LN:SCU40014] [AC:U40014] [PN:nitrate transporter] [GN:narT] [OR:Staphylococcus carnosus] [SR:Staphylococcus carnosus strain = TM300] [DB:genpept-bct2] [DE:Staphylococcus carnosus nitrate transporter (narT) gene, complete cds.] [NT:NarT] [LE:90] [RE:1256] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13866433_f2_661 842 4614 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13869827_f3_1087 843 4615 2385 794 2176 1.9e−225 Description pir:[LN:E70041] [AC:E70041] [PN:probable copper-transporting ATPase, yvgX] [GN:yvgX] [CL:Bacillus probable copper-transporting ATPase yvgx:ATPase nucleotide-binding domain homology:ATPase transduction domain homology:heavy-metal-associated homology] [OR:Bacillus subtilis] [EC:3.6.1.—] [DB:pir1] >gp:[GI:e1186038:g2635863] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgX] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to heavy metal-transporting ATPase] [LE:40633] [RE:43044] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_13955288_f1_5 844 4616 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14113806_f2_559 845 4617 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14222942_f2_747 846 4618 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1440890_f1_362 847 4619 339 112 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14454393_c3_2148 848 4620 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460882_c1_1400 849 4621 177 58 198 7.8e−16 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y17G] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460882_c3_1975 850 4622 177 58 242 1.7e−20 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460882_c3_2098 851 4623 210 69 264 7.9e−23 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460882_c3_2112 852 4624 177 58 226 8.4e−19 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460932_f1_34 853 4625 177 58 208 6.8e−17 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U356353 [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460932_f2_467 854 4626 177 58 196 1.3e−15 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14460932_f3_1045 855 4627 177 58 218 5.9e−18 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14480312_c1_1349 856 4628 1308 435 588 3.6e−57 Description pir:[LN:F69581] [AC:F69581] [PN:acetoin dehydrogenase E2 component (dihydrolipoamide acetyltra) acoC] [GN:acoC] [CL:dihydrolipoamide acetyltransferase:lipoyl/biotin-binding homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182798:g2633132] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:acetoin dehydrogenase E2 component] [GN:acoC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:alternate gene name:yfjI] [LE:77735] [RE:78931] [DI:direct] >gp:[GI:d1025206:g2780393] [LN:D78509] [AC:D78509] [PN:YfjI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis YfjG-YfjR genes, complete cds.] [LE:7394] [RE:8590] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14490756_f1_295 857 4629 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14492125_f3_1310 858 4630 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14495712_c1_1593 859 4631 297 98 109 5.0e−06 Description gp:[GI:g4894301] [LN:AF065404] [AC:AF065404] [PN:pXO1-85] [OR:Bacillus anthracis] [DB:genpept-bct2] [DE:Bacillus anthracis virulence plasmid PX01, complete sequence.] [LE:99636] [RE:100319] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14534387_f3_1231 860 4632 225 74 91 0.00017 Description gp:[GI:g1778751] [LN:SLU73444] [AC:U73444] [PN:SLUSH A] [GN:slushA] [FN:mediates haemolytic activity] [OR:Staphylococcus lugdunensis] [DB:genpept-bct1] [DE:Staphylococcus lugdunensis SLUSH A (SlushA), SLUSH B (slushB), and hemolysin (slushC) genes, complete cds.] [LE:570] [RE:701] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14552215_c3_2231 861 4633 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14562760_f1_359 862 4634 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14565637_f2_883 863 4635 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14626432_c2_1687 864 4636 2421 806 1387 7.8e−142 Description sp:[LN:SECA_STAAU] [AC:O06446] [GN:SECA] [OR:STAPHYLOCOCCUS AUREUS] [DE:PREPROTEIN TRANSLOCASE SECA SUBUNIT] [SP:O06446] [DB:swissprot] >gp:[GI:g2078390] [LN:SAU97062] [AC:U97062] [PN:SecA] [GN:secA] [FN:secretion] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus NCTC 8325 SecA (secA) gene, complete cds.] [LE:440] [RE:2971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14644037_c3_2056 865 4637 1575 524 401 2.8d−40 Description sp:[LN:YBJT_ECOLI] [AC:P75822] [GN:YBJT] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 53.7 KD PROTEIN IN ARTP-POXB INTERGENIC REGION] [SP:P75822] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14650312_c3_2045 866 4638 1170 389 319 1.2e−28 Description gp:[GI:e1423961:g4584121] [LN:BCE7788] [AC:AJ007788] [GN:capA] [OR:Bacillus cereus] [DB:genpept-bct1] [DE:Bacillus cereus ilvD, ilvA, capA genes, orf4, orf5 and orf6, partial.] [NT:related sequence M24150] [LE:2729] [RE:3832] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14662577_c3_1984 867 4639 537 178 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14720378_c3_2022 868 4640 726 241 292 8.5e−26 Description pir:[LN:D70380] [AC:D70380] [PN:hypothetical protein aq_928] [GN:aq_928] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983456] [LN:AE000714] [AC:AE000714:AE000657] [PN:putative protein] [GN:aq_928] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 46 of 109 of the complete genome.] [LE:6398] [RE:6988] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14725887_f3_1312 869 4641 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14729702_c2_1699 870 4642 2031 676 288 7.6e−22 Description gp:[GI:g4322670] [LN:AF094508] [AC:AF094508] [PN:dentin phosphoryn] [OR:Homo sapiens] [SR:human] [DB:genpept-pri4] [DE:Homo sapiens dentin phosphoryn mRNA, complete cds.] [LE:<1] [RE:2367] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14742887_c2_1735 871 4643 606 201 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14742937_c1_1449 872 4644 1203 400 94 0.0033 Description gp:[GI:g2935567] [LN:AF049856] [AC:AF049856] [PN:M protein] [GN:emm] [OR:Streptococcus pyogenes] [DB:genpept-bct2] [DE:Streptococcus pyogenes strain SS1457 M protein (emm) gene, partial cds.] [LE:<1] [RE:>403] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14843762_f3_1171 873 4645 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14851551_f1_417 874 4646 993 330 1143 5.6e−116 Description gp:[GI:g2565150] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:unknown] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:ORF14] [LE:10850] [RE:11809] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14851713_c2_1650 875 4647 966 321 941 1.4e−94 Description pir:[LN:D69581] [AC:D69581] [PN:acetoin dehydrogenase E1 component (TPP-dependent alpha subunit) acoA] [GN:acoA] [CL:pyruvate dehydrogenase (lipoamide) alpha chain:thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182796:g2633130] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:acetoin dehydrogenase E1 component] [GN:acoA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:alternate gene name: yfjK] [LE:75688] [RE:76689] [DI:direct] >gp:[GI:d1025208:g2780395] [LN:D78509] [AC:D78509] [PN:YfjK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis YfjG-YfjR genes, complete cds.] [LE:9636] RE:10637] [DI:complement] >gp:[GI:g2957146] [LN:AF006075] [AC:AF006075] [PN:TPP-dependent acetoin dehydrogenase, E1] [GN:acoA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis acetoin dehydrogenase enzyme system gene cluster, ribosomal protein L6-like protein gene, partial cds, TPP-dependentacetoin dehydrogenase, E1 alpha-subunit (acoA), TPP-dependentacetoin dehydrogenase, E1 beta-subunit (acoB), dihydrolipoamideacetyltransferase (acoC) and dihydrolipoamide dehydrogenase (acoL) genes, complete cds, and regulatory protein (acoR) gene, partial cds.] [NT:alpha subunit of the E1 component of the acetoin] [LE:825] [RE:1826] [DI:direct] >gp:[GI:g2957146] [LN:AF006075] [AC:AF006075] [PN:TPP-dependent acetoin dehydrogenase, E1] [GN:acoA] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis acetoin dehydrogenase enzyme system gene cluster, ribosomal protein L6-like protein gene, partial cds, TPP-dependentacetoin dehydrogenase, E1 alpha-subunit (acoA), TPP-dependentacetoin dehydrogenase, E1 beta-subunit (acoB), dihydrolipoamideacetyltransferase (acoC) and dihydrolipoamide dehydrogenase (acoL) genes, complete cds, and regulatory protein (acoR) gene, partial cds.] [NT:alpha subunit of the E1 component of the acetoin] [LE:825] [RE:1826] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14879667_c2_1781 876 4648 867 288 735 9.7e−73 Description sp:[LN:PANC_BACSU] [AC:P52998] [GN:PANC] [OR:BACILLUS SUBTILIS] [EC:6.3.2.1] [DE:(PANTOATE ACTIVATING ENZYME)] [SP:P52998] [DB:swissprot] >pir:[LN:H69671] [AC:H69671] [PN:pantothenate synthetase panC] [GN:panC] [CL:pantoate--beta-alanine ligase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146241] [LN:BACYPIA] [AC:L47709] [PN:pantothenate synthetase] [GN:panC] [FN:pantothenic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.2.1] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes, ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:40.8% of identity to the Escherichia coli] [LE:14128] [RE:14988] [DI:direct] >gp:[GI:e1183687:g2634660] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:pantothenate synthetase] [GN:panC] [FN:pantothenate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.2.1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [SP:P52998] [LE:156679] [RE:157539] DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14880051_f1_116 877 4649 1971 656 2450 1.8e−254 Description pir:[LN:C69621] [AC:C69621] [PN:fructose-bisphosphatase,] [GN:fbp:yydE] [CL:Bacillus subtilis fructose-bisphosphatase:phosphoesterase core homology] [OR:Bacillus subtilis] [EC:3.1.3.11] [DB:pir1] >gp:[GI:d1011939:g1064791] [LN:BACGNTZA] [AC:D78193] [GN:yydE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 36 kb sequence between gntZ and trnY genes encoding 34 ORFs.] [LE:9575] [RE:11590] [DI:direct] >gp:[GI:e1184745:g2636566] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:fructose-1,6-bisphosphatase] [GN:fbp] [FN:gluconeogenesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.3.11] [DE:Bacillus subtilis complete genome (section 21 of 21):from 3999281 to 4214814.] [NT:alternate gene name:yydE] [LE:127957] [RE:129972] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14881250_f3_1040 878 4650 999 332 1407 5.9e−144 Description gp:[GI:g1644433] [LN:SAU31175] [AC:U31175] [PN:D-specific D-2-hydroxyacid dehydrogenase] [GN:ddh] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus D-specific D-2-hydroxyacid dehydrogenase (ddh) gene, complete cds.] [NT:36.7 kDa protein; similar to NAD+-linked D-LDH,] [LE:259] [RE:1251] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14881908_c1_1494 879 4651 213 70 75 0.042 Description gp:[GI:g4406247] [LN:AF105113] [AC:AF105113] [PN:putative oligosaccharide repeat unit] [GN:cps19AJ] [OR:Streptococcus pneumoniae] [DB:genpept-bct2] [DE:Streptococcus pneumoniae type 19A putative oligosaccharide repeat unit transporter (cps19AJ) gene, partial cds; UDP-N-acetylglucosamine-2-epimerase (cps19AK), glucose-1-phosphate thymidylyltransferase (cps19AL), dTDP-4-keto-6-deoxyglucose-3,5-epimerase (cps19AM), dTDP-glucose-4,6-dehydratase (cps19AN), and dTDP-L-rhamnose synthase (cps19AO) genes, complete cds; and AliA (aliA) gene, partial cds.] [NT:Cps19AJ] [LE:<1] [RE:818] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14901578_c3_2235 880 4652 888 295 598 3.2e−58 Description pir:[LN:B69772] [AC:B69772 ] [PN:conserved hypothetical protein ydbO] [GN:ydbO] [CL:conserved hypothetical protein MJ0449] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020044:g1881264] [LN:AB001488] [AC:AB001488] [GN:ydbO] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN, SIMILAR PRODUCT IN B. SUBTILIS] [LE:39929] [RE:40801] [DI:direct] >gp:[GI:e1182420:g2632754] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydbO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to hypothetical proteins] [LE:103673] [RE:104545] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14931501_c2_1790 881 4653 1062 353 802 7.7e−80 Description pir:[LN:E71373] [AC:E71373] [PN:probable regulatory protein (pfoS/R)] [GN:TP0038] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322295] [LN:AE001189] [AC:AE001189:AE000520] [PN:regulatory protein (pfoS/R)] [GN:TP0038] [OR:Treponema pallidum] (DB:genpept-bct2] [DE:Treponema pallidum section 5 of 87 of the complete genome.] [NT:similar to GP:1354775 percent identity:100.00;] [LE:1177] [RE:2229] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14979713_c1_1590 882 4654 483 160 251 1.9e−21 Description sp:[LN:YORZ_LISMO] AC:P33385] [OR:LISTERIA MONOCYTOGENES] [DE:REGION (ORFZ)] [SP:P33385] [DB:swissprot] >pir:[LN:F43868] [AC:F43868] [PN:ORFZ] [OR:Listeria monocytogenes] [DB:pir2] >gp:[GI:g149647] [LN:LISACTLDH] [AC:M82881] [OR:Listeria monocytogenes] [SR:Listeria monocytogenes (strain L028) DNA] [DB:genpept-bct1] [DE:Listeria monocytogenes lecithinase, lactate dehydrogenase (actA) gene complete cds, (plcB) gene complete cds, (ldh) gene complete cds.] [NT:ORFZ] [LE:3582] [RE:4043] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15052187_f3_1188 883 4655 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15052188_f2_697 884 4656 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15126592_f3_1294 885 4657 1086 361 1831 7.0e−189 Description pir:[LN:S77610] [AC:S77610] [PN:probable intercellular adhesion protein C:icaC protein] [GN:icaC] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g1161382] [LN:SEU43366] [AC:U43366] [PN:IcaC] [GN:icaC] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis operon mediating intercellular adhesion:IcaR, IcaA, IcaD, IcaB, and IcaC genes, complete cds.] [LE:3121] [RE:4188] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1537_c1_1639 886 4658 153 50 89 0.00073 Description sp:[LN:YDGI_BACSU] [AC:P96707] [GN:YDGI] [OR:BACILLUS SUBTILIS] [EC:1.—.—.—] [DE:PUTATIVE NAD(P)H NITROREDUCTASE YDGI,] [SP:P96707] [DB:swissprot] >pir:[LN:C69783] [AC:C69783] [PN:NADH dehydrogenase homolog ydgI] [GN:ydgI] [CL:nitroreductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020152:g1881372] [LN:AB001488] [AC:AB001488] [GN:ydgI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:SIMILAR TO NITROREDUCTASE.] [LE:145410] [RE:146039] [DI:complement] >gp:[GI:e1182545:g2632879] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to NADH dehydrogenase] [SP:P96707] [LE:11206] [RE:11835] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_156387_c1_1367 887 4659 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15671925_c3_2051 888 4660 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_157093_c2_1947 889 4661 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15711457_f3_919 890 4662 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_157513_c3_2168 891 4663 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15752187_f2_664 892 4664 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_157807_c1_1613 893 4665 1584 527 1780 1.8e−183 Description gp:[GI:e316580:g2791907] [LN:SSK11MECA] [AC:Y13094] [GN:CTORF585] [OR:Staphylococcus sciuri] [DB:genpept-bct1] [DE:S. sciuri mecA gene, strain K11 (792).] [LE:<1] [RE:1757] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15814001_f1_269 894 4666 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_158411_c3_2104 895 4667 993 330 870 4.8e−87 Description sp:[LN:LDH_BACSU] [AC:P13714] [GN:LDH:LCTE] [OR:BACILLUS SUBTILIS] [EC:1.1.1.27] [DE:L-LACTATE DEHYDROGENASE,] [SP:P13714] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15894527_f3_1275 896 4668 267 88 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_15914762_f1_251 897 4669 579 192 654 3.7e−64 Description gp:[GI:g4574119] [LN:AF009415] [AC:AF009415] [PN:putative regulatory protein] [GN:cudC] [OR:Staphylococcus xylosus] [DB:genpept-bct2] [DE:Staphylococcus xylosus choline transporter (cudT), putative regulatory protein (cudC), glycine betaine aldehyde dehydrogenase (cudA), and choline dehydrogenase (cudB) genes, complete cds.] [NT:CudC] [LE:2604] [RE:3164] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16048828_c3_2224 898 4670 261 86 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_164715_c3_2251 899 4671 951 316 786 3.8e−78 Description gp:[GI:g4433641] [LN:AF029224] [AC:AF029224:AF029225] [PN:SirB] [GN:sirB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to C-terminus of Esherichia coli CysG.] [LE:5079] [RE:6032] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16600062_f1_117 900 4672 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16689067_c1_1368 901 4673 597 198 470 1.2e−44 Description sp:[LN:HIS7_LACLA] [AC:Q02134] [GN:HISB] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.2.1.19] [DE:IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE, (IGPD)] [SP:Q02134] [DB:swissprot] >pir:[LN:G45734] [AC:G45734:C36890] [PN:HisB] [CL:imidazoleglycerol-phosphate dehydratase:imidazoleglycerol-phosphate dehydratase homology] [OR:Lactococcus lactis subsp. lactis] [DB:pir2] >gp:[GI:g2565143] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:HisB] [GN:hisB] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:dehydratase] [LE:5869] [RE:6471] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16798125_c2_1862 902 4674 441 146 154 2.6e−10 Description sp:[LN:GUDT_BACSU] [AC:P42237] [GN:YCBE] [OR:BACILLUS SUBTILIS] [DE:PROBABLE GLUCARATE TRANSPORTER] [SP:P42237] [DB:swissprot] >pir:[LN:H69752] [AC:H69752] [PN:probalble glucarate transporter] [GN:ycbE] [CL:hexuronate transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1007040:g709999] [LN:BACYCB20] [AC:D30808] [PN:glucarate dehydratase] [GN:ycbE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168TrpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA around 20 degrees region of chromosome containing yckA-T genes.] [LE:3924] [RE:5291] [DI:direct] >gp:[GI:e1182200:g2632534] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ycbE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to glucarate transporter] [SP:P42237] [LE:75738] [RE:77105] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16802312_c3_2228 903 4675 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16834377_c2_1861 904 4676 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_16838207_f1_122 905 4677 288 95 175 2.1e−13 Description Sp:[LN:YJDJ_ECOLI] [AC:P39274] [GN:YJDJ] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 10.5 KD PROTEIN IN DCUB-LYSU INTERGENIC REGION (O90A)] [SP:P39274] [DB:swissprot] >pir:[LN:S56356] [AC:S56356:F65222] [PN:hypothetical 10.5K protein (dcub-lysu intergenic region):hypothetical protein o90a] [GN:yjd] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g536972] [LN:ECOUW93] [AC:U14003] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [NT:ORF_o90a] [LE:42913] [RE:43185] [DI:direct] >gp:[GI:g1790569] [LN:AE000485] [AC:AE000485:U00096] [PN:orf, hypothetical protein] [GN:yjdJ] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 375 of 400 of the complete genome.] [NT:o90a; 100 pct identical amino acid sequence and] [LE:6496] [RE:6768] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_17010952_c3_2147 906 4678 864 287 639 1.4e−62 Description pir:[LN:G70080] [AC:G70080] [PN:conserved hypothetical protein yxkD] [GN:yxkD] [CL:conserved hypothetical protein yitT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186383:g2636419] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:yxkD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:similar to hypothetical proteins] [LE:188319] [RE:189155] [DI:complement] >gp:[GI:d1012387:g1783243] [LN:D83026] [AC:D83026:D45911] [GN:yxkD] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence covering lic-cel region.] [NT:homologous to jojC gene product (B. subtilis;] [LE:35310] [RE:36146] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_179010_c3_2136 907 4679 546 181 344 2.6e−31 Description sp:[LN:OGT_HAEIN] [AC:P44687] [GN:OGT:DAT1:HI0402] [OR:HAEMOPHILUS INFLUENZAE] [EC:2.1.1.63] [DE:ALKYLTRANSFERASE)] [SP:P44687] [DB:swissprot] >pir:[LN:G64065] [AC:G64065] [PN:methylated-DNA--protein-cysteine S-methyltransferase homolog] [CL:methylated-DNA--protein-cysteine S-methyltransferase:methylated-DNA--protein-cysteine S-methyltransferase homology] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573373] [LN:U32723] [AC:U32723:L42023] [PN:methylated-DNA--protein-cysteine] [GN:HI0402] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 38 of 163 of the complete genome.] [NT:similar to SP:P11742 GB:X15659 PID:39876] [LE:9611] [RE:10183] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_181885_c3_2161 908 4680 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_194003_f1_134 909 4681 165 54 55 0.025 Description sp:[LN:RK19_GUITH] [AC:O78409] [GN:RPL19] [OR:GUILLARDIA THETA] [SR:,CRYPTOMONAS PHI] [DE:CHLOROPLAST 505 RIBOSOMAL PROTEIN L19] [SP:O78409] [DB:swissprot] >gp:[GI:g3602933] [LN:AF041468] [AC:AF041468:X14171:X62349:X51511:X14504:X52158:X52912:X56806:M7654 7] [PN:ribosomal protein L19] [GN:rpl19] [OR:Chloroplast Guillardia theta] [SR:Guillardia theta] [DB:genpept-pln2] [DE:Guillardia theta complete plastid genome.] [LE:181] [RE:573] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19531436_c3_2069 910 4682 1365 454 120 4.7e−05 Description gp:[GI:g1813493] [LN:BFU64314] [AC:U64314] [PN:hydrophobic protein] [OR:Bacillus firmus] [DB:genpept-bct1] [DE:Bacillus firmus putative hydrophobic protein gene, partial cds.] [NT:similar to Bacillus subtilis putative protein] [LE:193] [RE:>795] [D1:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19562805_c3_2135 911 4683 213 70 69 0.036 Description sp:[LN:VNB_INBMF] [AC:P16200] [GN:NB] [OR:INFLUENZA B VIRUS) [SR:B/MEMPHIS/3/89,] [DE:NB GLYCOPROTEIN] [SP:P16200] [DB:swissprot] >pir:[LN:A36825] [AC:A36825] [PN:NB glycoprotein] [CL:influenza B virus NB glycoprotein] [OR:influenza B virus] [DB:pir1] [MP:segment 6] >gp:[GI:g325221] [LN:FLBNAE] [AC:M30635] [OR:Influenza B virus] [SR:Influenza B/Memphis/3/89, cDNA to viral RNA] [DB:genpept-vrl] [DE:Influenza B/Memphis/3/89, neuraminidase and NB (seg 6) RNA, complete cds.] [NT:NB protein] [LE:16] [RE:315] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19564702_c3_2073 912 4684 477 158 397 6.3e−37 Description sp:[LN:GSHZ_NICSY] [AC:P30708] [OR:NICOTIANA SYLVESTRIS] [SR:,WOOD TOBACCO] [EC:1.11.1.9] [DE:GLUTATHIONE PEROXIDASE HOMOLOG 6P229,] [SP:P30708] [DB:swissprot] >pir:[LN:S20501] [AC:S20501] [PN:glutathione peroxidase homolog] [CL:glutathione peroxidase] [OR:Nicotiana sylvestris] [SR:, wood tobacco] [DB:pir2] >gp:[GI:g19739] [LN:NS6P229] [AC:X60219] [OR:Nicotiana sylvestris] [SR:wood tobacco] [DB:genpept-pln1] [DE:N. sylvestris mRNA for 6P229 polypeptide homologous to animal glutathione peroxidases.] [NT:homologous to animal glutathione peroxidases] [SP:P30708] [LE:154] [RE:663] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19585877_c1_1478 913 4685 1212 403 834 3.1e−83 Description pir:[LN:H69817] [AC:H69817] [PN:aminoacylase homolog yhaA] [GN:yhaA] [CL:hippurate hydrolase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183009:g2633343] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhaA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to aminoacylase] [LE:80123] [RE:81313] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19694050_f3_1299 914 4686 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_197090_c2_1776 915 4687 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19709637_c1_1576 916 4688 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19720642_c2_1710 917 4689 1296 431 525 1.7e−50 Description gp:[GI:e1358508:g3980137] [LN:LMO34616] [AC:AJ007319] [PN:succinyl-diaminopimelate desuccinylase] [GN:dapE] [OR:Listeria monocytogenes] [DB:genpept-bct1] [DE:Listeria monocytogenes ascB, inlG, inlH, inlE, dapE genes.] [LE:5533] [RE:6672] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_197312_c2_1804 918 4690 873 290 813 5.2e−81 Description sp:[LN:YHDF_BACSU] [AC:O07575] [GN:YHDF] [OR:BACILLUS SUBTILIS] [EC:1.—.—.—] [DE:(EC 1.—.—.—)] [SP:O07575] [DB:swissprot] >pir:[LN:D69825] [AC:D69825] [PN:glucose 1-dehydrogenase homolog yhdF] [GN:yhdF] [CL:short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182946:g2633280] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to glucose 1-dehydrogenase] [SP:O07575] [LE:22211] [RE:23080] [DI:direct] >gp:[GI:e1191878:g2226201] [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees:spoVRto sspB.] [NT:Similarity to glucose and ribitol dehydrogenase] [SP:O07575] [LE:8859] [RE:9728] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19781305_f1_20 919 4691 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19787788_f3_1311 920 4692 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_19929586_c3_2180 921 4693 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20081538_f1_158 922 4694 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20167186_c2_1958 923 4695 156 51 229 4.0e−19 Description gp:[GI:g4096799] [LN:SCU40158] [AC:U40158] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus response regulator-like protein (orfx) gene, partial cds.] [NT:orfx; function unknown; similar to response] [LE:<1] [RE:560] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20317_c2_1727 924 4696 2088 695 431 8.4e−38 Description sp:[LN:TAGF_BACSU] [AC:P13485] [GN:TAGF:RODC:TAG3] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID BIOSYNTHESIS PROTEIN F] [SP:P13485] [DB:swissprot] >pir:[LN:S06049] [AC:S06049:G69720] [PN:probable CDPglycerol glycerophosphotransferase, :CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase tagF:rodC protein:teichoic-acid synthase] [GN:rodC:tag3:tagF] [OR:Bacillus subtilis] [EC:2.7.8.12] [DB:pir2] [MP:310 degrees] >gp:[GI:g40100] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodC (tag3) polypeptide (AA 1–746)] [SP:P13485] [LE:2178] [RE:4418] [DI:direct] >gp:[GI:e1184478:g2636098] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:CDP-glycerol:polyglycerol phosphate] [GN:tagF] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:rodC] [SP:P13485] [LE:78129] [RE:80369] [DI:complement] >gp:[GI:e1184478:g2636098] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:CDP-glycerol:polyglycerol phosphate] [GN:tagF] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:rodC] [SP:P13485] [LE:78129] [RE:80369] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20323403_f3_1320 925 4697 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20335260_c3_2081 926 4698 1881 626 2151 8.6e−223 Description gp:[GI:g4098081] [LN:LLU73336] [AC:U73336] [PN:anaerobic ribonucleotide reductase] [GN:nrdD] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis anaerobic ribonucleotide reductase (nrdD) and anaerobic ribonucleotide reductase activator protein (nrdG) genes, complete cds.] [NT:NrdD] [LE:167] [RE:2410] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20360885_f3_1003 927 4699 1683 560 906 7.3e−91 Description sp:[LN:YHXB_BACSU] [AC:P18159] [GN:YHXB] [OR:BACILLUS SUBTILIS] [EC:5.4.2.8] [DE:PROBABLE PHOSPHOMANNOMUTASE, (PMM)] [SP:P18159] [DB:swissprot] >pir:[LN:C69835] [AC:C69835:D45868:S18566] [PN:phosphomannomutase homolog yhxB:hypothetical protein (glpD 3′ region)] [GN:yhxB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182920:g2633254] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhxB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to phosphomannomutase] [SP:P18159] [LE:203459] [RE:205156] [DI:direct] >gp:[GI:e1182932:g2633266] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhxB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to phosphomannomutase] [SP:P18159] [LE:6779] [RE:8476] [DI:direct] >gp:[GI:e324943:g2226139] [LN:BSY14079] [AC:Y14079] [PN:hypothetical protein] [GN:yhxB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees: glpPFKDoperon and downstream.] [NT:see EMBL M34393 and Swiss Prot P18159.; This could] [SP:P18159] [LE:6427] [RE:8124] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20410307_f2_684 928 4700 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20413202_f1_47 929 4701 1152 383 961 1.1e−96 Description sp:[LN:YHAD_ECOLI] [AC:P23524] [GN:YHAD] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 39.1 KD PROTEIN IN RNPB-SOHA INTERGENIC REGION (ORF 3)] [SP:P23524] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20433135_c3_2142 930 4702 801 266 151 1.4e−10 Description gp:[GI:d1011987:g1402529] [LN:D78257] [AC:D78257] [PN:ORF8] [GN:orf8] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis plasmid:pYI17 DNA] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pYI17 genes for BacA, BacB, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, partial cds.] [LE:1899] [RE:2261] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20484386_f2_470 931 4703 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20507625_c3_2004 932 4704 1011 336 244 1.0e−20 Description gp:[GI:g3127078] [LN:AF061070] [AC:AF061070] [PN:PtxB] [GN:ptxB] [OR:Pseudomonas stutzeri] [DB:genpept-bct2] [DE:Pseudomonas stutzeri Orf117 (orf117), Orf86 (orf86) genes, complete cds; and ptxABCDE operon, partial sequence.] [NT:putative binding protein component of] [LE:2345] [RE:3208] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20509637_c3_2110 933 4705 1335 444 311 8.2e−28 Description gp:[GI:g3676414] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf423] [LE:755] [RE:2026] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20509637_c3_2186 934 4706 1545 514 1655 3.1e−170 Description sp:[LN:GNTK_BACLI] [AC:P46834] [GN:GNTK] [OR:BACILLUS LICHENIFORMIS] [EC:2.7.1.12] [DE:GLUCONOKINASE, (GLUCONATE KINASE)] [SP:P46834] [DB:swissprot] >pir:[LN:JC2304] [AC:JC2304] [PN:gluconate kinase, :gntK protein] [GN:gntK] [CL:xylulokinase] [OR:Bacillus licheniformis] [EC:2.7.—.—] [DB:pir2] >gp:[GI:d1007073:g563951] [LN:BACGNTBL] [AC:D31631] [PN:gluconate kinase] [GN:gntK] [OR:Bacillus licheniformis] [SR:Bacillus licheniformis (strain:BGSC5A2) DNA] [DB:genpept-bct1] [DE:Bacillus licheniformis DNA for hypothetical protein and Gnt proteins.] [LE:I725] [RE:3266] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20515643_f3_1130 935 4707 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20524067_c1_1622 936 4708 639 212 231 2.5e−19 Description pir:[LN:C70041] [AC:C70041] [PN:conserved hypothetical protein yvgV] [GN:yvgV] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186036:g2635861] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgV] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:37577] [RE:38245] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20589568_c1_1392 937 4709 1557 518 282 1.1e−21 Description sp:[LN:TAGE_BACSU] [AC:P13484] [GN:TAGE:RODD:GTAA] [OR:BACILLUS SUBTILIS] [EC:2.4.1.52] [DE:(EC 2.4.1.52) (TEICHOIC ACID BIOSYNTHESIS PROTEIN E)] [SP:P13484] [DB:swissprot] >pir:[LN:S06048] [AC:S06048:F69720] [PN:poly(glycerol-phosphate) alpha-glucosyltransferase, tagE:probable rodD protein:UDP-glucose--polyglycerol phosphate glucosyltransferase tagE] [GN:tagE:rodD] [OR:Bacillus subtilis] [EC:2.4.1.52] [DB:pir2] [MP:310 degrees] >gp:[GI:g580920] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodD (gtaA) polypeptide (AA 1–673)) [SP:P13484] [LE:157] [RE:2178] [DI:direct] >gp:[GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] >gp:[GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2068937_f3_1191 938 4710 1539 512 1041 3.6e−105 Description pir:[LN:C69676] [AC:C69676:B39096:S16904:139952:S18269] [PN:alkaline phosphatase, III precursor:alkaline phosphatase B (phoB)] [GN:phoB:phoAII] [CL:alkaline phosphatase] [OR:Bacillus subtilis] [EC:3.1.3.1] [DB:pir2] >gp:[GI:e1182553:g2632887] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:alkaline phosphatase III] [GN:phoB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.3.1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:alternate gene name:phoAIII] [SP:P19405] [LE:19113] [RE:20501] [DI:complement] >gp:[GI:d1020477:g1945090] [LN:D88802] [AC:D88802] [GN:phoB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:B. subtilis alkaline phosphatase IIIA; P19405] [LE:6115] [RE:7503] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20822287_c1_1574 939 4711 684 227 563 1.6e−54 Description sp:[LN:GNTR_BACSU] [AC:P10585] [GN:GNTR] [OR:BACILLUS SUBTILIS] [DE:GLUCONATE OPERON TRANSCRIPTIONAL REPRESSOR (P28 PROTEIN)] [SP:P10585] [DB:swissprot] >pir:[LN:C26190] [AC:C26190:A23537:E69636:S10723] [PN:transcription repressor of gluconate operon gntR:gnt operon regulatory protein] [GN:gntR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1022429:g563933] [LN:AB005554] [AC:AB005554:D45242:D31629] [PN:gluconate operon repressor] [GN:gntR] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 36 kb region between gnt and ioloperons.] [NT:PROSITE; PS00043; HTH_GNTR_FAMILY; see SWISS_PROT] [LE:4516] [RE:5247] [DI:complement] >gp:[GI:g143014] [LN:BACGNT] [AC:J02584:M24505] [PN:gnt repressor] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain Marburg 168) DNA] [DB:genpept-bct1] [DE:B. subtilis (gluconate operon) gntR, gntK and gntP genes encoding gnt repressor, gluconate kinase and permease, and gntZ gene.] [LE:236] [RE:967] [DI:direct] >gp:[GI:e1184731:g2636552] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:transcriptional regulator (GntR family)] [GN:gntR] [FN:negative regulation of the gluconate operon] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P10585] [LE:113345] [RE:114076] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_20892325_c1_1389 940 4712 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_210885_f2_690 941 4713 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2125000_f1_305 942 4714 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI75030000985_2136712_c3_2211 943 4715 1197 398 469 1.5e−44 Description pir:[LN:H69784] [AC:H69784] [PN:chloramphenicol resistance protein homolog ydhL] [GN:ydhL] [CL:Streptomyces lividans chloramphenicol resistance protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182559:g2632893] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydhL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to chloramphenicol resistance protein] [LE:24142] [RE:25419] [DI:complement] >gp:[GI:d1020483:g1945096] [LN:D88802] [AC:D88802] [GN:ydhL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:S. lividans chloramphenicol resistance protein;] [LE:11144] [RE:12421] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_214026_c2_1767 944 4716 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2148428_f2_892 945 4717 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21493827_c2_1719 946 4718 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21515707_f3_1084 947 4719 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21517012_c2_1722 948 4720 411 136 289 1.8e−25 Description gp:[GI:g2318065] [LN:AF012532] [AC:AF012532] [PN:YeeE] [GN:yeeE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis strain 168 trpC2 YefA (yefA) gene, partial cds, and YefB (yefB), YefC (yefC), YeeA (yeeA), YeeB (yeeB), YeeC (yeeC), YeeD (yeeD), YeeE (yeeE) and YeeF (yeeF) genes, complete cds.] [LE:8308] [RE:9417] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21523377_f3_1042 949 4721 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21563751_f3_1315 950 4722 237 78 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21579561_c2_1962 951 4723 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21604040_c1_1522 952 4724 2028 675 1295 4.4e−132 Description sp:[LN:FEOB_METJA] [AC:Q57986] [GN:MJ0566] [OR:METHANOCOCCUS JANNASCHII] [DE:FERROUS IRON TRANSPORT PROTEIN B HOMOLOG] [SP:Q57986] [DB:swissprot] >pir:[LN:F64370] [AC:F64370] [PN:ferrous iron transport protein B] [CL:ferrous iron transport protein B:translation elongation factor Tu homology] [OR:Methanococcus jannaschii] [DB:pir2] [MP:REV504509-502503] >gp:[GI:g1591272] [LN:U67505] [AC:U67505:L77117] [PN:ferrous iron transport protein B (feoB)] [GN:MJ0566] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 47 of 150 of the complete genome.] [NT:similar to SP:P33650 PID:606344 PID:1199515] [LE:10027] [RE:12033] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21664126_c2_1712 953 4725 1083 360 1138 1.9e−115 Description gp:[GI:e1299583:g3687417] [LN:BLY17554] [AC:Y17554] [PN:ornithine carbamoyltransferase] [GN:arcB] [OR:Bacillus licheniformis] [DB:genpept-bct1] [EC:2.1.3.3] [DE:Bacillus licheniformis arcA, arcB, arcC and arcD genes.] [LE:1518] [RE:2525] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21674062_c1_1615 954 4726 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21678217_c2_1764 955 4727 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21687963_c1_1426 956 4728 477 158 192 3.4e−15 Description gp:[GI:g4980875] [LN:AE001717] [AC:AE001717:AE000512] [PN:arginine repressor] [GN:TM0371] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 29 of 136 of the complete genome.] [NT:similar to GB:M27869 SP:P17893 PID:142450] [LE:2550] [RE:3008] [DI:direct] >gp:[GI:e1489641:g5102818] [LN:TMA132286] [AC:AJ132286] [PN:arginine repressor] [GN:argR] [FN:regulation of arginine biosynthesis genes] [OR:Thermotoga maritima] [DB:genpept] [DE:Thermotoga maritima argR gene, strain MSB8.] [LE:1] [RE:459] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21759718_f1_181 957 4729 297 98 76 0.044 Description gp:[GI:g4049770] [LN:AF063866] [AC:AF063866] [PN:ORF MSV254 leucine rich repeat gene family] [GN:MSV254] [OR:Melanoplus sanguinipes entomopoxvirus] [DB genpept-vrl] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:220798] [RE:221799] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_21774087_c3_2111 958 4730 732 243 336 1.8e−30 Description sp:[LN:Y882_HAEIN] [AC:P44068] [GN:HI0882] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI0882] [SP:P44068] [DB:swissprot] >pir:[LN:E64015] [AC:E64015] [PN:hypothetical protein HI0882] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573906] [LN:U32770] [AC:U32770:L42023] [PN:H. influenzae predicted coding region HI0882] [GN:HI0882] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 85 of 163 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:1177] [RE:1914] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22275052_f1_248 959 4731 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22296927_f1_418 960 4732 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22304578_c2_1792 961 4733 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22345265_f1_27 962 4734 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22380343_f2_827 963 4735 1983 660 363 2.3e−30 Description sp:[LN:ALYS_ENTFA] [AC:P37710] [OR:ENTEROCOCCUS FAECALIS] [SR:,STREPTOCOCCUS FAECALIS] [EC:3.5.1.28] [DE:AUTOLYSIN, (N-ACETYLMURAMOYL-L-ALANINE AMIDASE)] [SP:P37710] [DB:swissprot] >pir:[LN:A38109] [AC:A38109] [PN:autolysin] [OR:Enterococcus faecalis] [DB:pir2] >gp:[GI:g829194] [LN:STRHYDROLA] [AC:M58002] [PN:bacterial cell wall hydrolase] [OR:Enterococcus faecalis] [SR:Streptococcus faecalis DNA] [DB:genpept-bct1] [DE:Streptococcus faecalis bacterial cell wall hydrolase gene, complete cds.] [LE:536] [RE:2551] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2242136_c3_2048 964 4736 684 227 583 1.2e−56 Description gp:[GI:e303881:g1850807] [LN:CPCPEAA] [AC:X71844] [PN:putative transposase] [OR:Clostridium perfringens] [DB:genpept-bct1] [DE:C. perfringens uapC, cpe, and nadC genes.] [LE:2477] [RE:2932] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22453186_f3_989 965 4737 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22460302_c1_1511 966 4738 756 251 334 3.0e−30 Description gp:[GI:g2735514] [LN:SCU96108] [AC:U96108] [PN:SceA precursor] [GN:sceA] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus (3R)-hydroxymyristoyl acyl carrier proteindehydrase homolog (fabZ) gene, partial cds, YwpF homolog, single-strand binding protein homolog (ssb), SceD precursor (sceD), SceA precursor (sceA) and SceE precursor (sceE) genes, complete cds, and TenA homolog (tenA) gene, partial cds.] [NT:secreted protein] [LE:2736] [RE:3449] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22656300_f2_881 967 4739 1542 513 1508 1.2e−154 Description gp:[GI:d1039113:g4514332] [LN:AB013369] [AC:AB013369] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 yesT and comEC genes, partial and complete cds.] [NT:unknown] [LE:4328] [RE:5830] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_22735877_f3_1047 968 4740 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23438751_f2_550 969 4741 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_234432_c1_1440 970 4742 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23445387_c3_1998 971 4743 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23468942_f1_79 972 4744 1101 366 928 3.4e−93 Description pir:[LN:A69984] [AC:A69984] [PN:endo-1,4-beta-glucanase homolog ysdC] [GN:ysdC] [CL:thermophilic aminopeptidase I alpha chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184131:g2635347] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysdC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to endo-1,4-beta-glucanase] [LE:154199] [RE:155284] [DI:complement] >gp:[GI:e1165304:g1770012] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysdC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:homology to celA of Clostridium thermocellum and] [LE:14623] [RE:15708] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23475251_c2_1952 973 4745 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23475325_c1_1479 974 4746 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23476503_f3_1228 975 4747 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23476702_c1_1496 976 4748 882 293 595 6.6e−58 Description sp:[LN:YWBI_BACSU] [AC:P39592] [GN:YWBI:IPA-24D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN THIK-EPR INTERGENIC REGION] [SP:P39592] [DB:swissprot] >pir:[LN:S39679] [AC:S39679:G70051] [PN:transcription regulator homolog ywbI:protein ipa-24d] [GN:ywbI] [CL:probable transcription regulator lsyR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413948] [LN:BSGENR] [AC:X73124] [GN:ipa-24d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39592] [LE:24460] [RE:25365] [DI:direct] >gp:[GI:e1186330:g2636366] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywbI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-24d; similar to] [SP:P39592] [LE:132594] [RE:133499] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23479702_c3_2053 977 4749 273 90 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23480467_c1_1549 978 4750 912 303 862 3.4e−86 Description pir:[LN:G69879] [AC:G69879] [PN:L-serine dehydratase homolog ylpA] [GN:ylpA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185177:g2633958] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylpA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to L-serine dehydratase] [LE:59909] [RE:60811] [DI:direct] >gp:[GI:e323528:g2337815] [LN:BSY13937] [AC:Y13937] [PN:putative YhaP protein] [GN:ylpA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:21681] [RE:22583] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_235205_c2_1845 979 4751 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23553275_f3_1064 980 4752 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23556338_c1_1568 981 4753 303 100 170 7.2e−13 Description Sp:[LN:YCNE_BACSU] [AC:P94425] [GN:YCNE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 10.9 KD PROTEIN IN PHRC-GDH INTERGENIC REGION] [SP:P94425] [DB:swissprot] >pir:[LN:A69764] [AC:A69764] [PN:conserved hypothetical protein ycnE] [GN:ycnE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182354:g2632688] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycnE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to hypothetical proteins] [SP:P94425] [LE:36112] [RE:36399] [DI:complement] >gp:[GI:d1009654:g1805457] [LN:D50453] [AC:D50453] [GN:ycnE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:118515] [RE:118802] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23593800_c1_1493 982 4754 942 313 141 8.3e−0.8 Description pir:[LN:D69778] [AC:D69778] [PN:hypothetical protein ydeJ] [GN:ydeJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020110:g1881330] [LN:AB001488] [AC:AB001488] [GN:ydeJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:102509] [RE:103168] [DI:complement] >gp:[GI:e1182488:g2632822] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydeJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [LE:166254] [RE:166913] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23595262_f2_695 983 4755 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23595312_f3_948 984 4756 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23600412_f3_960 985 4757 1242 413 546 1.0e−52 Description pir:[LN:E69783] [AC:E69783] [PN:bicyclomycin resistance protein homolog ydgK] [GN:ydgK] [CL:bicyclomycin resistance protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020154:g1881374] [LN:AB001488] [AC:AB001488] [GN:ydgK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:SIMILAR TO BICYCLOMYCIN RESISTANCE PROTEIN.] [LE:146860] [RE:148068] [DI:direct] >gp:[GI:e1182547:g2632881] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to bicyclomycin resistance protein] [LE:12656] [RE:13864] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23600752_f1_215 986 4758 240 79 73 0.014 Description pir:[LN:S69592] [AC:S69592] [PN:hypothetical protein YDR509w] [OR:Saccharomyces cerevisiae] [DB:pir2] [MP:4R] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23602015_c2_1892 987 4759 687 228 374 1.7e−34 Description sp:[LN:YBBL_ECOLI] [AC:P77279] [GN:YBBL] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBBL] [SP:P77279] [DB:swissprot] >pir:[LN:A64780] [AC:A64780] [PN:probable ABC-type transport protein ybbL:probable ABC transporter, ATP-binding protein ybbL] [GN:ybbL [CL:ATP-binding cassette homology] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1773172] [LN:ECU82664] [AC:U82664] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli minutes 9 to 11 genomic sequence.] [NT:hypothetical protein] [LE:95367] [RE:96044] [DI:direct] >gp:[GI:g1786698] [LN:AE000155] [AC:AE000155:U00096] [PN:putative ATP-binding component of a transport] [GN:ybbL] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 45 of 400 of the complete genome.] [NT:o225; This 225 aa ORF is 32 pct identical (7 gaps)] [LE:4439] [RE:5116] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23604052_f1_209 988 4760 318 105 81 0.0020 Description sp:[LN:YE1A_METJA] [AC:P81328] [GN:MJ1417.1] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ1417.1] [SP:P81328] [DB:swissprot] >gp:[GI:g2826408] [LN:U67582] [AC:U67582:L77117] [PN:M. jannaschii predicted coding region MJ1417.1] [GN:MJ1417.1] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 124 of 150 of the complete genome.] [NT:Brute Force ORF; identified by GeneMark; putative] [LE:4562] [RE:4999] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23620252_c1_1606 989 4761 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23625005_c3_2103 990 4762 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23631311_c2_1820 991 4763 297 98 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23635926_f2_538 992 4764 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23636343_c1_1383 993 4765 813 270 409 3.4e−38 Description sp:[LN:PHNE_ECOLI] [AC:P16683:Q47479:P76792:Q47716] [GN:PHNE] [OR:ESCHERICHIA COLI] [DE:PHOSPHONATES TRANSPORT SYSTEM PERMEASE PROTEIN PHNE] [SP:P16683:Q47479:P76792:Q47716] [DB:swissprot] >pir:[LN:F35718] [AC:F35718:A42732:S56332:S56331:G65219:F65219] [PN:phnE protein:hypothetical protein b4103] [GN:phnE] [CL:phnE protein] [OR:Escherichia coli] [DB:pir1] >gp:[GI:g247198] [LN:ECOPHNAQ] [AC:J05260] [OR:Escherichia coli] [SR:E. coli (strain B) DNA] [DB:genpept-bct1] [DE:E. coli psiD locus containing alkylphosphonate uptake (phn) genes Athrough Q, complete cds.] [NT:phnE protein] [LE:6227] [RE:7057] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23642942_c3_2087 994 4766 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23649187_c3_2050 995 4767 2637 878 227 9.2e−15 Description gp:[GI:g4049717] [LN:AF063866] [AC:AF063866] [PN:ORF MSV156 hypothetical protein] [GN:MSV156] [OR:Melanoplus sanguinipes entomopoxvirus] [DB:genpept-vrl] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:140126] [RE:143509] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23672518_f3_1031 996 4768 1011 336 529 6.5e−51 Description pir:[LN:F69659] [AC:F69659] [PN:molybdopterin biosynthesis protein moeB] [GN:moeB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185017:g2633798] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:molybdopterin biosynthesis protein] [GN:moeB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [LE:100770] [RE:101789] [DI:direct] >gp:[GI:g3282111] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:molybdopterin biosynthesis protein MoeB] [GN:moeB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:member of the moeB/hesA/thiF family; similar to] [LE:1258] [RE:2277] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23680300_f1_300 997 4769 948 315 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23710811_c1_1425 998 4770 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23828253_f1_81 999 4771 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23866552_f2_815 1000 4772 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_23868887_c2_1828 1001 4773 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24015687_c1_1476 1002 4774 1521 506 2197 1.1e−227 Description gp:[GI:g4574120] [LN:AF009415] [AC:AF009415] [PN:glycine betaine aldehyde dehydrogenase] [GN:cudA] [OR:Staphylococcus xylosus] [DB:genpept-bct2] [DE:Staphylococcus xylosus choline transporter (cudT), putative regulatory protein (cudC), glycine betaine aldehyde dehydrogenase (cudA), and choline dehydrogenase (cudB) genes, complete cds.] [NT:CudA] [LE:3363] [RE:4856] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24019026_f1_390 1003 4775 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24022177_c1_1575 1004 4776 1389 462 1499 1.1e−153 Description sp:[LN:GNTP_BACSU] [AC:P12012] [GN:GNTP] [OR:BACILLUS SUBTILIS] [DE:GLUCONATE PERMEASE] [SP:P12012] [DB:swissprot] >pir:[LN:A26190] [AC:A26190:D69636] [PN:gluconate permease gntp] [GN:gntP] [CL:D-serine permease] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1022427:g563931] [LN:AB005554] [AC:AB005554:D45242:D31629] [PN:gluconate permease] [GN:gntP] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 36 kb region between gnt and ioloperons.] [NT:homologs are found in E. coli and H. influenzae;] [LE:1607] [RE:2953] [DI:complement] >gp:[GI:g143016] [LN:BACGNT] [AC:J02584:M24505] [PN:permease] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain Marburg 168) DNA] [DB:genpept-bct1] [DE:B. subtilis (gluconate operon) gntR, gntK and gntP genes encoding gnt repressor, gluconate kinase and permease, and gntZ gene.] [LE:2530] [RE:3876] [DI:direct] >gp:[GI:e1184733:g2636554] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:gluconate permease] [GN:gntP] [FN:gluconate utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21):from 3999281 to 4214814.] [SP:P12012] [LE:115639] [RE:116985] [DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24070155_f2_878 1005 4777 495 164 280 1.6e-24 Description pir:[LN:A69849] [AC:A69849] [PN:hypothetical protein yjdF] [GN:yjdF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183223:g2633557] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjdF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:80891] [RE:81373] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24087760_c2_1742 1006 4778 903 300 665 2.5e-65 Description pir:[LN:F69997] [AC:F69997] [PN:hypothetical protein ytnM] [GN:ytnM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184177:g2635393] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ytnM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:202739] [RE:203641] [DI:complement] >gp:[GI:e1185801:g2635412] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytnM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [LE:99] [RE:1001] [DI:complement] >gp:[GI:g2293257] [LN:AF008220] [AC:AF008220] [PN:YtnM] [GN:ytnM] OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to a hypothetical protein] [LE:179426] [RE:180328] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24095327_c2_1770 1007 4779 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24101701_c1_1485 1008 4780 1542 513 1542 2.9e-158 Description gp:[GI:d1039113:g4514332] [LN:AB013369] [AC:AB013369] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 yesT and comEC genes, partial and complete cds.] [NT:unknown] [LE:4328] [RE:5830] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24220260_c3_2109 1009 4781 1056 351 121 0.00034 Description gp:[GI:e316518:g2230824] [LN:DDSTATFIR] [AC:Y13097] [PN:STAT protein] [GN:dstA] [FN:regulates stalk cell differentiation] [OR:Dictyostelium discoideum] [DB:genpept-inv1] [DE:D. discoideum mRNA for stat protein, first finger stage.] [LE:507] [RE:2630] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24220290_f2_582 1010 4782 1482 493 935 6.2e-94 Description sp:[LN:ALDA_ECOLI] [AC:P25553] [GN:ALDA:ALD] [OR:ESCHERICHIA COLI] [EC:1.2.1.22] [DE:ALDEHYDE DEHYDROGENASE A, (LACTALDEHYDE DEHYDROGENASE)] [SP:P25553] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24224037_c2_1825 1011 4783 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24225015_f3_1098 1012 4784 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24225015_f3_1127 1013 4785 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24226577_c3_2184 1014 4786 834 277 153 9.4e-11 Description sp:[LN:MERR_BACSR] [AC:P22853] [GN:MERR] [OR:BACILLUS SP] [SR:RC607,] [DE:MERCURIC RESISTANCE OPERON REGULATORY PROTEIN] [SP:P22853] [DB:swissprot] >pir:[LN:A32227] [AC:A32227] [PN:hypothetical protein 1 (mer operon)] [CL:transcription repressor glnR] [OR:Bacillus sp.] [DB:pir2] >gp:[GI:e301549:g2995399] [LN:BMMERAR2] [AC:Y09907] [PN:regulatory protein] [GN:merR] [OR:Bacillus megaterium] [DB:genpept-bct1] [DE:Bacillus megaterium ORF2, ORF3, ORF4, merR and merA genes.] [LE:574] [RE:972] [DI:direct] >gp:[GI:g1129093] [LN:AF138877] [AC:AF138877:M22708:M22709:AH003258] [PN:mercury resistance operon negative regulator] [GN:merR1] [OR:Bacillus sp. RC607] [DB:genpept-bct2] [DE:Bacillus sp. RC607 mercury resistance operon, complete sequence.] [LE:827] [RE:1225] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24250177_c1_1630 1015 4787 714 237 653 4.7e-64 Description gp:[GI:e1429599:g4756153] [LN:A67161] [AC:A67161] [FN:NARJ GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 1 from Patent EP0805205.] [NT:unnamed protein product] [LE:9374] [RE:9949] [DI:direct] >gp:[GI:g3929524] [LN:AF029224] [AC:AF029224:AF029225] [PN:NarJ] [GN:narJ] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to Escherichia coli nitrate reductases NRA] [LE:11559] [RE:12134] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24251251_c2_1868 1016 4788 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24251400_f2_508 1017 4789 792 263 721 2.9e-71 Description gp:[GI:g1854577] [LN:STALYTS] [AC:L42945] [GN:lytR] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus lytS and lytR genes, complete cds.] [LE:1849] [RE:2589] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24251635_f3_1143 1018 4790 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24261062_c1_1458 1019 4791 1773 590 1994 3.7e-206 Description pir:[LN:F70040] [AC:F70040] [PN:sulfite reductase homolog yvgQ] [GN:yvgQ] [CL:sulfite reductase (ferredoxin)] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186031:g2635856] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to sulfite reductase] [LE:30110] [RE:31825] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24269812_f1_414 1020 4792 627 208 285 4.7e-25 Description gp:[GI:e1312907:g3355681] [LN:SC1C2] [AC:AL031124] [PN:hypothetical protein SC1C2.14c] [GN:SC1C2.14c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 1C2.] [NT:SC1C2.14c, unknown, len:185 aa; similar to] [LE:14959] [RE:15516] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24273375_c2_1749 1021 4793 600 199 789 1.8e-78 Description gp:[GI:g4574118] [LN:AF009415] [AC:AF009415] [PN:choline transporter] [GN:cudT] [OR:Staphylococcus xylosus] [DB:genpept-bct2] [DE:Staphylococcus xylosus choline transporter (cudT), putative regulatory protein (cudC), glycine betaine aldehyde dehydrogenase (cudA), and choline dehydrogenase (cudB) genes, complete cds.] [NT:CudT] [LE:811] [RE:2433] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24275187_f2_858 1022 4794 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24303775_f2_444 1023 4795 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24304187_c2_1728 1024 4796 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24304712_f1_311 1025 4797 1674 557 1015 2.1e-102 Description sp:[LN:DCIP_ENTCL] [AC:P23234] [GN:IPDC] [OR:ENTEROBACTER CLOACAE] [EC:4.1.1.74] [DE:(DECARBOXYLASE)] [SP:P23234] [DB:swissprot] >pir:[LN:S16013] [AC:S16013] [PN:indolepyruvate decarboxylase,] [CL:acetolactate synthase large chain:thiamine pyrophosphate-binding domain homology] [OR:Enterobacter cloacae] [EC:4.1.1.-] [DB:pir2] >gp:[GI:d1014947:g216677] [LN:ENTIPDC] [AC:D90214] [OR:Enterobacter cloacae] [SR:E. cloacae (strain FERM BP-1529) genomic DNA] [DB:genpept-bct1] [DE:E. cloacae gene for indolepyruvate decarboxylase.] [NT:indolepyruvate decarboxylase] [LE:31] [RE:1689] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24333286_f2_802 1026 4798 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24337791_c3_2068 1027 4799 1113 370 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24337807_c3_2076 1028 4800 1890 629 1795 4.6e-185 Description pir:[LN:G70040] [AC:G70040] [PN:sulfite reductase homolog yvgR] [GN:yvgR] [CL:sulfite reductase (NADPH):flavodoxin homology:NADPH--ferrihemoprotein reductase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186032:g2635857] [LN:BSUB0018] [AC:Z99121:AL0091261 [GN:yvgR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to sulfite reductase] [LE:31851] [RE:33668] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24338217_c2_1747 1029 4801 597 198 372 2.8e-34 Description gp:[GI:g4098082] [LN:LLU73336] [AC:U73336] [PN:anaerobic ribonucleotide reductase activator] [GN:nrdG] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis anaerobic ribonucleotide reductase (nrdD) and anaerobic ribonucleotide reductase activator protein (nrdG) genes, complete cds.] [NT:NrdG] [LE:2413] [RE:3012] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24351562_f3_1230 1030 4802 255 84 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24353390_c2_1882 1031 4803 696 231 421 1.8e-39 Description pir:[LN:S76993] [AC:S76993] [PN:hypothetical protein] [CL:ribitol dehydrogenase:short-chain alcohol dehydrogenase homology] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803, ] [DB:pir2] >gp:[GI:d1011336:g1001805] [LN:SYCSLRG] [AC:D64005:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 24/27, 3002966–3138603.] [NT:ORF_ID:slr0315] [LE:34344] [RE:35078] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24353392_c2_1954 1032 4804 2409 802 3358 0.0 Description gp:[GI:e1429587:g4756149] [LN:A67161] [AC:A67161] [FN:NIRB GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 1 from Patent EP0805205.] [NT:unnamed protein product] [LE:181] [RE:2586] [DI:direct] >gp:[GI:g4433639] [LN:AF029224] [AC:AF029224:AF029225] [PN:NirB] [GN:nirB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to Escherichia coli NADH-dependent nitrite] [LE:2366] [RE:4771] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24406542_f3_1293 1033 4805 339 112 513 3.2e-49 Description gp:[GI:g2914128] [LN:SEU43366] [AC:U43366] [PN:IcaD] [GN:icaD] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis operon mediating intercellular adhesion:IcaR, IcaA, IcaD, IcaB, and IcaC genes, complete cds.] [LE:1963] [RE:2268] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24406952_c1_1434 1034 4806 447 148 188 8.9e-15 Description sp:[LN:PETP_RHOCA] [AC:P31078] [GN:PETP] [OR:RHODOBACTER CAPSULATUS] [SR:,RHODOPSEUDOMONAS CAPSULATA] [DE:PETP PROTEIN] [SP:P31078] [DB:swissprot] >pir:[LN:S22631] [AC:S22631:S21001] [PN:petP protein] [GN:petP] [OR:Rhodobacter capsulatus] [DB:pir2] >gp:[GI:e49248:g1333802] [LN:RCPETPR] [AC:Z12113:S42067] [PN:protein of unknown function] [GN:petP] [OR:Rhodobacter capsulatus] [DB:genpept-bct1] [DE:R. capsulatus petP, petR, and fbcF genes.] [NT:part of the petPR operon in front of fbc operon] [SP:P31078] [LE:199] [RE:699] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24415887_c2_1761 1035 4807 927 308 123 2.7e-05 Description gp:[GI:g3955198] [LN:AF022796] [AC:AF022796] [PN:ModA] [GN:modA] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:molybdate-binding lipoprotein of the] [LE:109] [RE:894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24416068_c1_1624 1036 4808 549 182 528 8.3e-51 Description pir:[LN:C69996] [AC:C69996] [PN:conserved hypothetical protein ytmI] [GN:ytmI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184188:g2635404] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ytmI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to hypothetical proteins from B. subtilis] [LE:212192] [RE:212728] [DI:complement] >gp:[GI:e1185812:g2635423] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytmI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to hypothetical proteins from B. subtilis] [LE:9552] [RE:10088] [DI:complement] >gp:[GI:g2293246] [LN:AF008220] [AC:AF008220] [PN:YtmI] [GN:ytmI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to a hypothetical 19 kD protein from B.] [LE:170339] [RE:170875] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24421937_c3_1999 1037 4809 1269 422 778 2.7e-77 Description pir:[LN:B69801] [AC:B69801] [PN:chloramphenicol resistance protein homolog yfhI] [GN:yfhI] [CL:Streptomyces lividans chloramphenicol resistance protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182844:g2633178] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to antibiotic resistance protein] [LE:123573] [RE:124766] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24429663_c1_1444 1038 4810 933 310 326 2.1e-29 Description sp:[LN:YXDK_BACSU] [AC:P42422] [GN:YXDK:B65E] [OR:BACILLUS SUBTILIS] [EC:2.7.3.-] [DE:(EC 2.7.3.-)] [SP:P42422] [DB:swissprot] >pir:[LN:H70073] [AC:H70073] [PN:two-component sensor histidine kinase homolog yxdK] [GN:yxdK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1003811:g709992] [LN:BACIOLO] [AC:D14399] [PN:hypothetical protein] [GN:B65E] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (168 trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 15 kb chromosome segment contains the iol operon.] [NT:homologous to sensor protein BVgC, His protein] [LE:11893] [RE:12870] [DI:direct] >gp:[GI:e1184690:g2636511] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxdK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to two-component sensor histidine kinase] [SP:P42422] [LE:70819] [RE:71796] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24432327_c2_1777 1039 4811 1665 554 1633 6.7e-168 Description gp:[GI:g473902] [LN:LACALS] [AC:L16975] [PN:alpha-acetolactate synthase] [GN:als] [OR:Lactococcus lactis] [SR:Lactococcus lactis (strain DSM 20384, sub_species lactis) DNA] [DB:genpept-bct1] [DE:Lactococcus lactis alpha-acetolactate synthase (als) gene, complete cds.] [LE:1232] [RE:2896] [DI:direct] >gp:[GI:g809618] [LN:A23961] [AC:A23961] [PN:alpha-acetolactate synthase] [OR:Lactococcus lactis] [DB:genpept-pat] [DE:L. lactis alpha-acetolactate synthase gene.] [LE:550] [RE:2214] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24500300_c1_1462 1040 4812 1206 401 1208 7.3e-123 Description pir:[LN:B69877] [AC:B69877] [PN:sulfate adenylyltransferase homolog ylnB] [GN:ylnB] [CL:Synechocystis sulfate adenylyltransferase:sulfate adenylyltransferase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e332185:g2462958] [LN:BSPYREYLO] [AC:AJ000974] [PN:putative sulfate adenylyltransferase] [GN:ylnB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis pyrE to yloA gene region.] [LE:2374] [RE:3522] [DI:direct] >gp:[GI:e1185151:g2633932] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylnB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to sulfate adenylyltransferase] [LE:33187] [RE:34335] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_245443_c1_1548 1041 4813 696 231 375 1.4e-34 Description pir:[LN:F69879] [AC:F69879] [PN:phosphoglycerate dehydrogenase homolog yloW] [GN:yloW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185176:g2633957] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to phosphoglycerate dehydrogenase] [LE:59221] [RE:59883] [DI:direct] >gp:[GI:e323511:g2337814] [LN:BSY13937] [AC:Y13937] [PN:putative YhaQ protein] [GN:yloW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:20993] [RE:21655] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24611567_c2_1831 1042 4814 1074 357 478 1.7e-45 Description pir:[LN:S36209] [AC:S36209] [PN:dep protein precursor] [GN:dep] [OR:Bacillus anthracis] [DB:pir2] >gp:[GI:d1003632:g436034] [LN:BACDEP] [AC:D14037] [PN:ORF] [GN:dep] [OR:Bacillus anthracis] [SR:Bacillus anthracis (strain:Davis) plasmid:pTE702 DNA] [DB:genpept-bct1] [DE:Bacillus anthracis plasmid pTE702 dep gene for ORF, complete cds.] [LE:252] [RE:1652] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24617025_c1_1339 1043 4815 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24617262_c1_1501 1044 4816 825 274 690 5.7e-68 Description sp:[LN:PANB_BACSU] [AC:P52996] [GN:PANB] [OR:BACILLUS SUBTILIS] [EC:2.1.2.11] [DE:(KETOPANTOATE HYDROXYMETHYLTRANSFERASE)] [SP:P52996] [DB:swissprot] >pir:[LN:G69671] [AC:G69671] [PN:ketopantoate hydroxymethyltransferase panB] [GN:panB] [CL:3-methyl-2-oxobutanoate hydroxymethyltransferase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146240] [LN:BACYPIA] [AC:L47709] [PN:ketopantoate hydroxymethyltransferase] [GN:panB] [FN:pantothenic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.2.11] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes, ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:47.1% of identity to the 3-methyl-2-oxobutanoate] [LE:13293] [RE:14126] [DI:direct] >gp:[GI:e1183688:g2634661] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:ketopantoate hydroxymethyltransferase] [GN:panB] [FN:pantothenate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.2.11] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [SP:P52996] [LE:157541] [RE:158374] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24640910_c2_1654 1045 4817 519 172 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24641932_c2_1734 1046 4818 672 223 500 7.7e-48 Description gp:[GI:g4104595] [LN:AF036964] [AC:AF036964] [PN:putative response regulator] [GN:rrp1] [OR:Lactobacillus sakei] [DB:genpept-bct2] [DE:Lactobacillus sake putative response regulator (rrp1) and putative histidine kinase (hpk1) genes, complete cds.] [NT:Rrp1; member of a two-component regulatory system] [LE:2112] [RE:2786] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24643930_c3_2138 1047 4819 696 231 399 3.9e-37 Description sp:[LN:YOHK_ECOLI] [AC:P33373] [GN:YOHK] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 24.5 KD PROTEIN IN PBPG-CDD INTERGENIC REGION] [SP:P33373] [DB:swissprot] >pir:[LN:E64982] [AC:E64982] [PN:yohK protein] [GN:yohK] [CL:yohK protein] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1788464] [LN:AE000303] [AC:AE000303:U00096] [PN:putative seritonin transporter] [GN:yohK] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 193 of 400 of the complete genome.] [NT:o231; residues 10295 are 100 pct identical to] [LE:6088] [RE:6783] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24646963_c3_2072 1048 4820 1350 449 1703 2.6e-175 Description gp:[GI:e315090:g2791905] [LN:SSK3MECA1] [AC:Y13052] [GN:ORF454] [OR:Staphylococcus sciuri] [DB:genpept-bct1] [DE:S. sciuri mecA1 gene, strain K3(MM2).] [LE:4208] [RE:5572] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24648377_c3_2261 1049 4821 1146 381 1301 1.0e-132 Description gp:[GI:e1429613:g4756156] [LN:A67169] [AC:A67169] [PN:NART GENE] [FN:NITRATE TRANSPORT] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 9 from Patent EP0805205.] [LE:538] [RE:1704] [DI:direct] >gp:[GI:g2529402] [LN:SCU40014] [AC:U40014] [PN:nitrate transporter] [GN:narT] [OR:Staphylococcus carnosus] [SR:Staphylococcus carnosus strain = TM300] [DB:genpept-bct2] [DE:Staphylococcus carnosus nitrate transporter (narT) gene, complete cds.] [NT:NarT] [LE:90] [RE:1256] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24648502_c3_2088 1050 4822 468 155 228 5.1e-19 Description sp:[LN:YHGC_BACSU] [AC:P380491] [GN:YHGC] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 18.8 KD PROTEIN IN ECSC-PBPF INTERGENIC REGION] [SP:P38049] [DB:swissprot] > pir:[LN:B40614] [AC:B40614:F69832] [PN:conserved hypothetical protein yhgC:hypothetical protein X (pbpF 5′ region)] [GN:yhgC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g304160] [LN:BACPBPF] [AC:L10630] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis penicillin-binding protein (pbpF) gene, 5′ end.] [NT:product unknown] [LE:247] [RE:747] [DI:complement] >gp:[GI:e1183012:g2633346] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhgC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:alternate gene name:yixC; similar to hypothetical] [SP:P38049] [LE:83202] [RE:83702] [DI:complement] >gp:[GI:e325006:g2226228] [LN:BSY14083] [AC:Y14083] [PN:Hypothetical protein] [GN:yixC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 76–78 degrees: between glyB–aprE.] [NT:See Swiss Prot P38049; YIXC_BACSU] [SP:P38049] [LE:3061] [RE:3561] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24648551_f2_791 1051 4823 174 57 108 6.6e-06 Description gp:[GI:g1022725] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF2] [LE:394] [RE:1083] [DI:complement] >gp:[GI:g295162] [LN:STAMECRA] [AC:L14017] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) gene and unknown ORF, complete cds.] [NT:unknown ORF1; putative] [LE:1492] [RE:2181] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24652312_f1_419 1052 4824 1617 538 1137 2.4e-115 Description gp:[GI:g4835822] [LN:AF102174] [AC:AF102174] [PN:glycine betaine transporter BetL] [GN:betL] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes glycine betaine transporter BetL (betL) gene, complete cds.] [LE:209] [RE:1732] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24665957_c3_2149 1053 4825 1494 497 1335 2.5e-136 Description sp:[LN:XYLB_BACSU] [AC:P39211] [GN:XYLB] [OR:BACILLUS SUBTILIS] [EC:2.7.1.17] [DE:XYLULOSE KINASE, (XYLULOKINASE)] [SP:P39211] [DB:swissprot] >pir:[LN:D69735] [AC:D69735] [PN:xylulose kinase xylB] [GN:xylB] [CL:xylulokinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1750125] [LN:BSU66480] [AC:U66480] [PN:xylulose kinase] [GN:xylB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis SpoVK (spoVK), YnbA (ynbA), YnbB (ynbB), GlnR (glnR), glutamine synthetase (glnA), YnaA (ynaA), YnaB (ynaB), YnaC (ynaC), YnaD (ynaD), YnaE (ynaE), YnaF (ynaF), YnaG (ynaG), YnaH (ynaH), YnaI (ynaI), YnaJ (ynaJ), xylan beta-1,4-xylosidase (xynB), xylose repressor (xylR), xylose isomerase (xylA), xylulose kinase (xylB), YncB (yncB), YncC (yncC), YncD (yncD) and YncE (yncE) genes, complete cds.] [LE:19399] [RE:20898] [DI:direct] >gp:[GI:e1183420:g2634145] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:xylulose kinase] [GN:xylB] [FN:xylose metabolism] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.17] [DE:Bacillus subtilis complete genome (section 10 of 21):from 1781201 to 2014980.] [NT:alternate gene name:yncA] [SP:P39211] [LE:111450] [RE:112949] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24720257_f1_131 1054 4826 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24722175_c1_1538 1055 4827 1101 366 353 2.9e-32 Description pir:[LN:H70069] [AC:H70069] [PN:capsular polyglutamate biosynthesis homolog ywtB] [GN:ywtB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184494:g2636113] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtB] [FN:unknown] [OR:Baciilus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to capsular polyglutamate biosynthesis] [LE:99788] [RE:100930] [DI:complement] >gp:[GI:e308090:g1894767] [LN:BSZ92954] [AC:Z92954] [GN:ywtB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis yws [A, B, C, D, E, F, G] and gerBC genes.] [NT:product highly similar to Bacillus anthracis CapA] [LE:1552] [RE:2694] [DI:direct] >gp:[GI:e1184494:g2636113] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtB] [FN:unknown] [OR:Bacilius subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to capsular polyglutamate biosynthesis] [LE:99788] [RE:100930] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24730438_c2_1833 1056 4828 420 139 374 1.7e-34 Description gp:[GI:g4959403] [LN:AF115391] [AC:AF115391] [PN:ribose permease RbsD] [GN:rbsD] [OR:Lactobacillus sakei] [DB:genpept-bct2] [DE:Lactobacillus sakei LaaA (laaA) gene, partial cds; LaaB (laaB), putative acetate kinase AckA (ackA), LaaC (laaC) genes, complete cds; rbs operon, complete sequence; and LaaE (laaE) gene, partial cds.] [LE:4035] [RE:4430] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24797140_c2_1871 1057 4829 900 299 145 7.3e-08 Description sp:[LN:ESTE_PSEFL] [AC:P22862] [OR:PSEUDOMONAS FLUORESCENS] [EC:3.1.1.2] [DE:ARYLESTERASE, (ARYL-ESTER HYDROLASE)] [SP:P22862] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24797900_c1_1361 1058 4830 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24812502_c1_1521 1059 4831 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24814838_c2_1789 1060 4832 870 289 350 6.1e-32 Description pir:[LN:S76790] [AC:S76790] [PN:hypothetical protein] [CL:hypothetical protein b1725] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803, ] [DB:pir2] >gp:[GI:d1019435:g1653791] [LN:D90916] [AC:D90916:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 26/27, 3270710–3418851.] [NT:ORF_ID:s1r1563] [LE:99350] [RE:100237] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24817202_c1_1512 1061 4833 1809 602 799 2.3e-116 Description pir:[LN:C69975] [AC:C69975] [PN:acyltransferase homolog yrhL] [GN:yrhL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1934616] [LN:BSU93874] [AC:U93874] [PN:hypothetical protein YrhL] [GN:yrhL] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis cysteine synthase (yrhA), cystathioninegamma-lyase (yrhB), YrhC (yrhC), YrhD (yrhD), formate dehydrogenasechain A (yrhE), YrhF (yrhF), formate dehydrogenase (yrhG), YrhH (yrhH), regulatory protein (yrhI), cytochrome P450 102 (yrhJ), YrhK (yrhK), hypothetical protein YrhL (yrhL), putative anti-SigV factor (yrhM), RNA polymerase sigma factor SigV (sigV) and YrhO (yrhO) genes, complete cds, and YrhP (yrhP) gene, partial cds.] [NT:similar to Haemophilus influenzae hypothetical] [LE:13904] [RE:15808] [DI:complement] >gp:[GI:e1183944:g2635160] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrhL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [NT:similar to acyltransferase] [LE:171138] [RE:173042] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_24855337_c2_1957 1062 4834 693 230 1003 3.8e-101 Description gp:[GI:e1429602:g4756154] [LN:A67161] [AC:A67161] [FN:NARI GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 1 from Patent EP0805205.] [NT:unnamed protein product] [LE:9942] [RE:10625] [DI:direct] >gp:[GI:g3929525] [LN:AF029224] [AC:AF029224:AF029225] [PN:NarI] [GN:narI] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to Escherichia coli nitrate reductases NRA] [LE:12127] [RE:12810] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_250178_c3_2162 1063 4835 234 77 82 0.0015 Description pir:[LN:E70557] [AC:E70557] [PN:hypothetical protein Rv1615] [GN:Rv1615] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e316881:g2113899] [LN:MTCY01B2] [AC:Z95554:AL123456] [PN:hypothetical protein Rv1615] [GN:Rv1615] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 72/162.] [NT:Rv1615, (MTCY01B2.07), len:146. Function:unknown] [LE:7451] [RE:7891] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2507950_f1_199 1064 4836 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_251_f1_433 1065 4837 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25398426_f1_211 1066 4838 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25413577_f3_1032 1067 4839 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25429700_c2_1683 1068 4840 1356 451 158 1.8e-08 Description gp:[GI:e332306:g2462111] [LN:BCY11138] [AC:Y11138] [GN:ORF1] [OR:Bacillus cereus] [DB:genpept-bct1] [DE:B. cereus DNA for ORF1, ORF2 and ORF3 (2402 bp).] [NT:shows weak homology to C. elegans cosmid C33A12 ORF] [LE:156] [RE:1373] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25431558_f1_63 1069 4841 705 234 855 1.9e-85 Description gp:[GI:g1575026] [LN:SAU52961] [AC:U52961] [PN:LrgB] [GN:lrgB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus strain = NCTC 8325-4] [DB:genpept-bct2] [DE:Staphylococcus aureus holin-like protein LrgA (lrgA) and LrgB (lrgB) genes, complete cds.] [NT:LytSR-regulated gene; similar to E. coli yohK] [LE:805] [RE:1506] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25433452_f1_61 1070 4842 1791 596 1867 1.1e-192 Description gp:[GI:g862312] [LN:STALYTS] [AC:L42945] [GN:lytS] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus lytS and lytR genes, complete cds.] [LE:92] [RE:1846] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25570262_f1_358 1071 4843 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25578215_c2_1740 1072 4844 543 180 483 4.9e-46 Description gp:[GI:e316582:g2791909] [LN:SSK11MECA] [AC:Y13094] [GN:ORF141] [OR:Staphylococcus sciuri] [DB:genpept-bct1] [DE:S. sciuri mecA gene, strain K11 (792).] [LE:4489] [RE:4914] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2557962_f2_698 1073 4845 1377 458 953 7.7e-96 Description sp:[LN:NAOX_ENTFA] [AC:P37061] [GN:NOX] [OR:ENTEROCOCCUS FAECALIS] [SR:,STREPTOCOCCUS FAECALIS] [EC:1.6.99.3] [DE:NADH OXIDASE, (NOXASE)] [SP:P37061] [DB:swissprot] >pir:[LN:S26965] [AC:S26965] [PN:NADH oxidase] [CL:NADH peroxidase] [OR:Enterococcus faecalis] [DB:pir2] >gp:[GI:g47045] [LN:SFNOXAA] [AC:X68847:S45681] [PN:NADH oxidase] [GN:nox] [OR:Enterococcus faecalis] [DB:genpept-bct1] [DE:S. faecalis nox gene for NADH oxidase.] [SP:P37061] [LE:88] [RE:1428] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25580425_f1_74 1074 4846 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25585932_c1_1598 1075 4847 276 91 254 9.0e-22 Description gp:[GI:d1039105:g4514322] [LN:AB013367] [AC:AB013367] [PN:YdeI] [GN:ydeI] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 ydeI gene, complete cds.] [LE:276] [RE:869] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25600015_c3_2090 1076 4848 1632 543 1561 2.9e-160 Description pir:[LN:E69989] [AC:E69989] [PN:acetate--CoA ligase, ytcI] [GN:ytcI] [CL:acetate--CoA ligase homology] [OR:Bacillus subtilis] [EC:6.2.1.1] [DB:pir2] >gp:[GI:e1185829:g2635440] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytcI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to acetate-CoA ligase] [LE:24979] [RE:26574] [DI:complement] >gp:[GI:g2293232] [LN:AF008220] [AC:AF008220] [PN:YtcI] [GN:ytcI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:putative acetate CoA-ligase] [LE:153853] [RE:155448] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25626875_f2_653 1077 4849 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25666427_f3_1335 1078 4850 306 101 84 0.0061 Description sp:[LN:SSUA_BACSU] [AC:P40400] [GN:SSUA] [OR:BACILLUS SUBTILIS] [DE:PUTATIVE ALIPHATIC SULFONATES BINDING PROTEIN PRECURSOR] [SP:P40400] [DB:swissprot] >pir:[LN:I39927] [AC:I39927:C69817] [PN:ABC transporter (binding lipoprotein) homolog ygbA] [GN:ygbA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g438472] [LN:BACORFKLM] [AC:L16808] [OR:Bacillus subtilis] [SR:Bacillus subtilis (individual_isolate MS11) (library:Tn91] [DB:genpept-bct1] [DE:Bacillus subtilis orfK, orfL and orfM, complete cds's.] [NT:Likely N-terminal signal sequence, followed by] [LE:69] [RE:1067] [DI:direct] >gp:[GI:e1182873:g2633207] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:ygbA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:alternate gene name:yzeA; similar to ABC] [SP:P40400] [LE:158868] [RE:159866] [DI:direct] >gp:[GI:e308630:g1903039] [LN:BSZ93102] [AC:Z931021] [PN:hypothetical 36.3 kd lipoprotein precursor] [GN:yzeA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis yga [L, M, N, O, P, Q, R, S, T], yzdB and yze [A, C] genes.] [NT:homology to nitrate transport protein precursor] [SP:P40400] [LE:1194] [RE:2192] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25961087_f1_123 1079 4851 813 270 399 3.9e-37 Description sp:[LN:YFIE_BACSU] [AC:P54721] [GN:YFIE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.5 KD PROTEIN IN GLVBC 3′ REGION] [SP:P54721] [DB:swissprot] >pir:[LN:H69802] [AC:H69802] [PN:conserved hypothetical protein yfiE] [GN:yfiE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182814:g2633148] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfiE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to hypothetical proteins from B. subtilis] [SP:P54721] [LE:94696] [RE:95553] [DI:direct] >gp:[GI:d1009744:g1486247] [LN:D50543] [AC:D50543] [PN:unknown] [GN:yfiE] [FN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168, haplotype:haploid) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 76-degree region, complete cds.] [LE:8372] [RE:9229] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_25970952_f1_316 1080 4852 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26017278_c1_1441 1081 4853 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26179777_c1_1558 1082 4854 1818 605 522 3.6e-50 Description pir:[LN:S75742] [AC:S75742] [PN:hypothetical protein s110556] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1011128:g1001236] [LN:SYCSLLE] [AC:D64003:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 22/27, 2755703–2868766.] [NT:ORF_ID:s110556] [LE:45438] [RE:47333] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26188837_c1_1601 1083 4855 975 324 838 1.2e-83 Description pir:[LN:A69670] [AC:A69670] [PN:choline ABC transporter (choline-binding protein) opuBC] [GN:opuBC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186059:g2635884] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:choline ABC transporter (choline-binding] [GN:opuBC] [FN:high affinity transport of choline] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:prox] [LE:60016] [RE:60936] [DI:complement] >gp:[GI:g2293449] [LN:AF008930] [AC:AF008930] [PN:choline binding protein precursor] [GN:opuBC] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis choline transport system including ATPase (opuBA), transmembrane protein (opuBB), choline binding protein precursor (opuBC) and transmembrane protein (opuBD) genes, complete cds; and unknown gene.] [NT:part of choline uptake system; OpuBC; lipoprotein] [LE:2708] [RE:3628] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26207537_f3_1201 1084 4856 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26213885_c3_2215 1085 4857 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26220077_f3_445 1086 4858 447 148 259 2.7e-22 Description pir:[LN:E69857] [AC:E69857] [PN:conserved hypothetical protein ykmA] [GN:ykmA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181515:g2632035] [LN:BSAJ2571] [AC:AJ002571] [PN:YkmA] [GN:ykmA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:33559] [RE:34002] [DI:complement] >gp:[GI:e1183335:g2633669] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykmA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to hypothetical proteins] [LE:186508] [RE:186951] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26353411_c1_1391 1087 4859 576 191 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26380265_c3_2042 1088 4860 1263 420 1291 1.2e-131 Description gp:[GI:e1299582:g3687416] [LN:BLY17554] [AC:Y17554] [PN:arginine deiminase] [GN:arcA] [OR:Bacillus licheniformis] [DB:genpept-bct1] [EC:3.5.3.6] [DE:Bacillus licheniformis arcA, arcB, arcC and arcD genes.] [LE:248] [RE:1489] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26383512_c1_1506 1089 4861 1398 465 1195 1.7e-121 Description sp:[LN:YDGF_BACSU] [AC:P96704] [GN:YDGF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL TRANSPORT PROTEIN IN EXPZ-DINB INTERGENIC REGION] [SP:P96704] [DB:swissprot] >pir:[LN:H69782] [AC:H69782] [PN:amino acid ABC transporter (permease) homolog ydgF] [GN:ydgF] [CL:arginine permease] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020148:g1881368] [LN:AB001488] [AC:AB001488] [GN:ydgF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE AMINO ACID TRANSPORT PERMIASE.] [LE:139917] [RE:141293] [DI:complement] >gp:[GI:e1182528:g2632862] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydgF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to amino acid ABC transporter (permease)] [SP:P96704] [LE:203663] [RE:205039] [DI:complement] >gp:[GI:e1182541:g2632875] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to amino acid ABC transporter (permease)] [SP:P96704] [LE:5713] [RE:7089] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26385928_f2_900 1090 4862 1437 478 1441 1.5e-147 Description pir:[LN:F69811] [AC:F69811] [PN:2-oxoglutarate/malate translocator homolog yflS] [GN:yflS] [CL:2-oxoglutarate/malate translocator] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182747:g2633081] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yflS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to 2-oxoglutarate/malate translocator] [LE:26070] [RE:27506] [DI:direct] >gp:[GI:d1023175:g2443241] [LN:D86417] [AC:D86417] [PN:YflS] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:21015] [RE:22451] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26429800_f2_605 1091 4863 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26449187_c1_1436 1092 4864 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26571937_f2_570 1093 4865 789 262 838 1.2e-83 Description pir:[LN:D69845] [AC:D69845] [PN:thiamin biosynthesis homolog yjbT] [GN:yjbT] [CL:thiamine biosynthesis protein thiG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183189:g2633523] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to thiamin biosynthesis] [LE:50122] [RE:50892] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26595641_f2_572 1094 4866 621 206 416 6.1e-39 Description sp:[LN:APL_LACLA] [AC:Q48630] [GN:APL] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [DE:ALKALINE PHOSPHATASE LIKE PROTEIN] [SP:Q48630] [DB:swissprot] >pir:[LN:S39339] [AC:539339] [PN:alkaline phosphatase-like protein] [CL:probable alkaline phosphatase yngC] [OR:Lactococcus lactis] [DB:pir2] >gp:[GI:g435296] [LN:LLALPHLP] [AC:Z29065] [PN:alkaline phosphatase like protein] [GN:apl] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:L. lactis (MG1363) apl gene for alkaline phosphatase like protein.] [SP:Q48630] [LE:339] [RE:1067] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26600425_f3_1300 1095 4867 792 263 220 3.6e-18 Description sp:[LN:ARY1_MOUSE] [AC:P50294] [GN:AAC1:NAT1] [OR:MUS MUSCULUS] [SR:,MOUSE] [EC:2.3.1.5] [DE:ARYLANINE N-ACETYLTRANSFERASE 1, (NAT-1)] [SP:P50294] [DB:swissprot] >gp:[GI:g1045651] [LN:MMNAT1] [AC:U37119] [PN:arylamine N-acetyltransferase] [GN:NAT1] [OR:Mus musculus] [SR:house mouse strain = C3H/HeJ] [DB:genpept-rod] [DE:Mus musculus arylamine N-acetyltransferase (NAT1) gene, complete cds.] [LE:1] [RE:873] [DI:direct] >gp:[GI:g1008568] [LN:MMU35885] [AC:U35885] [PN:N-acetyltransferase NAT-1] [OR:Mus musculus] [SR:house mouse strain = C57B16] [DB:genpept-rod] [DE:Mus musculus N-acetyltransferase NAT-1 mRNA, complete cds.] [LE:217] [RE:1089] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26605001_c3_2206 1096 4868 825 274 686 1.5e-67 Description sp:[LN:YXBG_BACSU] [AC:P46331] [GN:YXBG:E3BR] [OR:BACILLUS SUBTILIS] [EC:1.-.-.-] [DE:(EC 1.-.-.-)] [SP:P46331] [DB:swissprot] >pir:[LN:B70073] [AC:B70073] [PN:glucose 1-dehydrogenase homolog yxbG] [GN:yxbG] [CL:short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1022451:g904199] [LN:AB005554] [AC:AB005554:D45242:D31629] [PN:probable oxidoreductase] [GN:yxbG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [EC:1.1.1.47] [DE:Bacillus subtilis genomic DNA, 36 kb region between gnt and iol operons.] [NT:conserved universally] [LE:26446] [RE:27234] [DI:complement] >gp:[GI:e1184709:g2636530] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxbG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:alternate gene name:yxaU; similar to glucose] [SP:P46331] [LE:91359] [RE:92147] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26672512_c1_1554 1097 4869 192 63 48 0.048 Description gp:[GI:g2444136] [LN:U88974] [AC:U88974] [PN:ORF56] [OR:Streptococcus thermophilus temperate bacteriophage O1205] [DB:genpept-phg] [DE:Streptococcus thermophilus temperate bacteriophage O1205, complete genome.] [LE:42158] [RE:42484] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_266877_f2_877 1098 4870 450 149 285 4.7e-25 Description pir:[LN:F69653] [AC:F69653] [PN:transcription regulator lrpC] [GN:lrpC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182391:g2632725] [LN:BSUB0003] [AC:Z99106:AL009126] [PN:transcriptional regulator (Lrp/AsnC family)] [GN:lrpC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:alternate gene name:ydaI] [LE:72862] [RE:73296] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26751431_c3_1973 1099 4871 1062 353 1037 9.6e-105 Description pir:[LN:E69581] [AC:E69581] [PN:acetoin dehydrogenase E1 component (TPP-dependent beta subunit) acoB] [GN:acoB] [CL:pyruvate dehydrogenase (lipoamide) beta chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182797:g2633131] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:acetoin dehydrogenase E1 component] [GN:acoB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:alternate gene name:yfjJ] [LE:76693] [RE:77721] [DI:direct] >gp:[GI:d1025207:g2780394] [LN:D78509] [AC:D78509] [PN:YfjJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis YfjG-YfjR genes, complete cds.] [LE:8604] [RE:9632] [DI:complement] >gp:[GI:g2245638] [LN:AF006075] [AC:AF006075] [PN:TPP-dependent acetoin dehydrogenase, E1] [GN:acoB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis acetoin dehydrogenase enzyme system gene cluster, ribosomal protein L6-like protein gene, partial cds, TPP-dependent acetoin dehydrogenase, E1 alpha-subunit CacoA), TPP-dependent acetoin dehydrogenase, E1 beta-subunit (acoB), dihydrolipoamideacetyltransferase (acoC) and dihydrolipoamide dehydrogenase (acoL) genes, complete cds, and regulatory protein (acoR) gene, partial cds.] [NT:beta subunit of the E1 component of the acetoin] [LE:1830] [RE:2858] [DI:direct] >gp:[GI:g2245638] [LN:AF006075] [AC:AF006075] [PN:TPP-dependent acetoin dehydrogenase, E1] [GN:acoB] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis acetoin dehydrogenase enzyme system gene cluster, ribosomal protein L6-like protein gene, partial cds, TPP-dependentacetoin dehydrogenase, E1 alpha-subunit (acoA), TPP-dependentacetoin dehydrogenase, E1 beta-subunit (acoB), dihydrolipoamideacetyltransferase (acoC) and dihydrolipoamide dehydrogenase (acoL) genes, complete cds, and regulatory protein (acoR) gene, partial cds.] [NT:beta subunit of the E1 component of the acetoin] [LE:1830] [RE:2858] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_26751887_c1_1608 1100 4872 954 317 297 2.5e-26 Description sp:[LN:APBA_AQUAE] [AC:O67619] [GN:APBA:AQ_1727] [OR:AQUIFEX AEOLICUS] [EC:1.1.1.169] [DE:(REDUCTASE) (KPA REDUCTASE)] [SP:O67619] [DB:swissprot] >pir:[LN:A70449] [AC:A70449] [PN:hypothetical protein aq_1727] [GN:aq_1727] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2984043] [LN:AE000753] [AC:AE000753:AE000657] [PN:putative protein] [GN:aq_1727] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 85 of 109 of the complete genome.] [LE:5968] [RE:6900] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_273452_c2_1815 1101 4873 1278 425 800 1.2e-79 Description sp:[LN:HMDH_ARCFU] [AC:O28538] [GN:HMGA:AF1736] [OR:ARCHAEOGLOBUS FULGIDUS] [EC:1.1.1.34] [DE:(REDUCTASE)] [SP:O28538] [DB:swissprot] >pir:[LN:G69466] [AC:G69466] [PN:3-hydroxy-3-methylglutaryl-coenzyme A reductase (mvaA) homolog] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2648815] [LN:AE000983] [AC:AE000983:AE000782] [PN:3-hydroxy-3-methylglutaryl-coenzyme A reductase] [GN:AF1736] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 124 of 172 of the complete genome.] [NT:similar to SP:P13702 GB:M29727 GB:M31807 PID:151259] [LE:7093] [RE:8403] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2735807_c3_1983 1102 4874 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2739050_c2_1816 1103 4875 927 308 583 1.2e-56 Description sp:[LN:YWBI_BACSU] [AC:P39592] [GN:YWBI:IPA-24D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN THIK-EPR INTERGENIC REGION] [SP:P39592] [DB:swissprot] >pir:[LN:S39679] [AC:S39679:G70051] [PN:transcription regulator homolog ywbI:protein ipa-24d] [GN:ywbI] [CL:probable transcription regulator lsyR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413948] [LN:BSGENR] [AC:X73124] [GN:ipa-24d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39592] [LE:24460] [RE:25365] [DI:direct] >gp:[GI:e1186330:g2636366] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywbI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-24d; similar to] [SP:P39592] [LE:132594] [RE:133499] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2739561_f1_99 1104 4876 1440 479 1505 2.5e-154 Description sp:[LN:GLPT_BACSU] [AC:P37948] [GN:GLPT] [OR:BACILLUS SUBTILIS] [DE:(PERMEASE)] [SP:P37948] [DB:swissprot] >pir:[LN:I40417] [AC:I40417:F69634:S37250] [PN:glycerol-3-phosphate transport protein glpT:glycerol-3-phosphate permease glpT] [GN:glpT] [CL:hexose phosphate transport protein uhpT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1034077:g3599636] [LN:AB006424] [AC:AB006424] [GN:ybeE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23 degree.] [LE:36984] [RE:38318] [DI:complement] >gp:[GI:g403372] [LN:BSGLPTQ] [AC:Z26522] [PN:glycerol 3-phosphate permease] [GN:glpT] [FN:uptake of glycerol 3-phosphate] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis glpT and glpQ genes for glycerol 3-phosphate permease and glycerophosphoryl diester phosphodiesterase.] [SP:P37948] [LE:315] [RE:1649] [DI:direct] >gp:[GI:e1182166:g2632500] [LN:BSUB0002] [AC:Z99105:AL009126] [PN:glycerol-3-phosphate permease] [GN:glpT] [FN:uptake of glycerol-3-phosphate] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:alternate gene name:ybeE] [SP:P37948] [LE:39333] [RE:40667] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2760930_f1_121 1105 4877 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2767577_c3_2139 1106 4878 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2790936_f2_823 1107 4879 954 317 834 3.1e-83 Description sp:[LN:MANA_STRMU] [AC:Q59935] [GN:PMI] [OR:STREPTOCOCCUS MUTANS] [EC:5.3.1.8] [DE:(PMI) (PHOSPHOHEXOMUTASE)] [SP:Q59935] [DB:swissprot] >gp:[GI:d1004537:g451216] [LN:STRPMI] [AC:D16594] [PN:Mannosephosphate Isomerase] [GN:pmi] [OR:Streptococcus mutans] [SR:Streptococcus mutans (strain:GS-5) DNA] [DB:genpept-bct1] [EC:5.3.1.8] [DE:S. mutans pmi gene for mannosephosphate isomerase (complete cds) and scrK gene for fructokinase (partial cds).] [LE:241] [RE:1191] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2814000_c3_2159 1108 4880 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2819803_c3_1966 1109 4881 363 120 206 1.1e-16 Description gp:[GI:e1312399:g3341642] [LN:VCH231123] [AC:AJ231123] [GN:z61r] [OR:Vibrio cholerae] [DB:genpept-bct1] [DE:Vibrio cholerae z61r gene.] [LE:47] [RE:388] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2823562_c3_2100 1110 4882 1365 454 909 3.5e-91 Description pir:[LN:A71026] [AC:A71026] [PN:probable aminotransferase] [GN:PH1501] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031552:g3257926] [LN:AP000006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:438aa long hypothetical aminotransferase] [GN:PH1501] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001–1485000 nt. position (6/7).] [NT:similar to owl:D5045389 percent identity:38.287 in] [LE:170905] [RE:172221] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2853431_f2_504 1111 4883 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2854787_c1_1553 1112 4884 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_2867961_c2_1846 1113 4885 963 320 410 2.7e-38 Description pir:[LN:A69756] [AC:A69756] [PN:adhesion protein homolog ycdH] [GN:ycdH] [CL:adhesin B] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1023108:g2415736] [LN:AB000617] [AC:AB000617] [PN:YcdH] [GN:ycdH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 22 to 25 degree region, complete cds.] [NT:homologue of adhesion protein precursor of] [LE:21421] [RE:22380] [DI:direct] >gp:[GI:e1182237:g2632571] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ycdH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to adhesion protein] [LE:113236] [RE:114195] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29304552_c3_2150 1114 4886 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29352312_c3_2063 1115 4887 765 254 617 3.1e-60 Description sp:[LN:YXDL_BACSU] [AC:P42423] [GN:YXDL:B65F] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN IDH 3′ REGION] [SP:P42423] [DB:swissprot] >pir:[LN:A70074] [AC:A70074] [PN:ABC transporter (ATP-binding protein) homolog yxdL] [GN:yxdL] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1003812:g709993] [LN:BACIOLO] [AC:D14399] [PN:hypothetical protein] [GN:B65F] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (168 trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 15 kb chromosome segment contains the iol operon.] [NT:homologous to cell division protein FtsE of E.] [LE:13014] [RE:13787] [DI:direct] >gp:[GI:e1184689:g2636510] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxdL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to ABC transporter (ATP-binding protein)] [SP:P42423] [LE:69902] [RE:70675] [DI:complement] >gp:[GI:d1008911:g1408484] [LN:D45912] [AC:D45912] [GN:yxdL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (Marburg 168; trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence between the iol and hut operon, partial and complete cds.] [NT:homologous to FtsE protein of E. coli, belonging to] [LE:801] [RE:1574] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29375307_f2_499 1116 4888 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29400332_c1_1571 1117 4889 417 138 309 1.3e-27 Description pir:[LN:C69770] [AC:C69770] [PN:hypothetical protein ydaT] [GN:ydaT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020028:g1881248] [LN:AB001488] [AC:AB001488] [GN:ydaT] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:26046] [RE:26498] [DI:complement] >gp:[GI:e1182404:g2632738] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydaT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [LE:89790] [RE:90242] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29493827_f2_872 1118 4890 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29503403_f2_788 1119 4891 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29532827_f2_477 1120 4892 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29695327_c2_1739 1121 4893 750 249 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_29955003_c2_1894 1122 4894 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30007827_c2_1943 1123 4895 789 262 605 5.8e-59 Description pir:[LN:E69761] [AC:E69761:I40450:S52381] [PN:probable glutamine ABC transporter] [GN:yckK] [CL:lysine-arginine-ornithine-binding protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182313:g2632647] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yckK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to 415810.] [NT:similar to glutamine ABC transporter] [LE:215587] [RE:216393] [DI:complement] >gp:[GI:e1182328:g2632662] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:yckK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:similar to glutamine ABC transporter] [LE:7487] [RE:8293] [DI:complement] >gp:[GI:d1009629:g1805432] [LN:D50453] [AC:D50453] [PN:homologue of glutamine-binding periplasmic] [GN:yckK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing the amyE-srfA region, complete cds.] [LE:89890] [RE:90696] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30078378_c1_1437 1124 4896 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3009382_c3_1965 1125 4897 531 176 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30095011_f1_179 1126 4898 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30133562_c1_1399 1127 4899 1191 396 306 2.8e-27 Description sp:[LN:YYBF_BACSU] [AC:P37498] [GN:YYBF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 44.2 KD PROTEIN IN COTF-TETB INTERGENIC REGION] [SP:P37498] [DB:swissprot] >pir:[LN:S65991] [AC:S65991:A70087] [PN:membrane protein yybF] [GN:yybF] [CL:probable antibiotic resistance protein yybF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005739:g467351] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:27159] [RE:28373] [DI:complement] >gp:[GI:e1184792:g2636613] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yybF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to antibiotic resistance protein] [SP:P37498] [LE:179091] [RE:180305] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_302_f2_645 1128 4900 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30360925_f2_901 1129 4901 642 213 204 2.0e-16 Description sp:[LN:Y357_HAEIN] [AC:P44658] [GN:HI0357] [OR:HAEMOPHILUS INFLUENZAE] [DE:PUTATIVE THIAMINE BIOSYNTHESIS PROTEIN HI0357] [SP:P44658] [DB:swissprot] >pir:[LN:C64063] [AC:C64063] [PN:hypothetical protein HI0357] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573325] [LN:U32720] [AC:U32720:L42023] [PN:thiamine biosynthesis protein, putative] [GN:HI0357] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 35 of 163 of the complete genome.] [NT:similar to SP:P42883 SP:P43534 SP:P47183] [LE:3006] [RE:3950] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30367767_f1_56 1130 4902 1533 510 342 5.9e-31 Description pir:[LN:D71235] [AC:D71235] [PN:hypothetical protein PH0142] [GN:PH0142] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030154:g3256528] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:289aa long hypothetical protein] [GN:PH0142] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [NT:motif = soybean trypsin inhibitor (Kunitz) protease] [LE:124718] [RE:125587] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30470325_c3_2181 1131 4903 1953 650 425 8.1e-38 Description pir:[LN:A70027] [AC:A70027] [PN:conserved hypothetical protein yvaC] [GN:yvaC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186043:g2635868] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvaC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:45749] [RE:47644] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_30651577_c3_2155 1132 4904 612 203 88 0.00087 Description pir:[LN:G70065] [AC:G70065] [PN:hypothetical protein ywpE] [GN:ywpE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184540:g2636159] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywpE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [LE:143698] [RE:144006] [DI:complement] >gp:[GI:e289144:g1763706] [LN:BSZ83337] [AC:Z83337] [GN:ywpE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis mbl, flh[O, P], rapD, ywp [B, C, D, E, F, G, H, I, J] and ywqA genes.] [LE:5315] [RE:5623] [DI:direct] >gp:[GI:e1184540:g2636159] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywpE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [LE:143698] [RE:144006] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_31490687_f3_1096 1133 4905 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_31517587_c2_1663 1134 4906 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3157062_c1_1475 1135 4907 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_31693_c2_1716 1136 4908 699 232 128 7.1e-08 Description pir:[LN:JH0364] [AC:JH0364] [PN:hypothetical protein 176 (SAGP 5′ region)] [OR:Streptococcus pyogenes] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_31720942_f2_813 1137 4909 576 191 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_31755012_c1_1340 1138 4910 978 325 886 9.6e-89 Description pir:[LN:E70070] [AC:E70070] [PN:metabolite transport protein homolog ywtG] [GN:ywtG] [CL:glucose transport protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184489:g2636109] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to metabolite transport protein] [LE:94500] [RE:95873] [DI:complement] >gp:[GI:e308095:g1894771] [LN:BSZ92954] [AC:Z92954] [GN:ywtG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis yws [A, B, C, D, E, F, G] and gerBC genes.] [NT:product highly similar to metabolite transport] [LE:6609] [RE:7982] [DI:direct] >gp:[GI:e1184489:g2636109] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to metabolite transport protein] [LE:94500] [RE:95873] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3182927_c2_1673 1139 4911 2082 693 3598 0.0 Description gp:[GI:g2981225] [LN:AF053006] [AC:AF053006] [PN:lipase precursor] [GN:geh1] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis lipase precursor (geh1) gene, complete cds.] [LE:148] [RE:2214] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_32205143_c2_1642 1140 4912 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_32220202_f2_708 1141 4913 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_32221012_c1_1567 1142 4914 471 156 114 4.6e-06 Description sp:[LN:NPT4_HUMAN] [AC:O00476] [GN:SLC17A4:NPT4] [OR:HOMO SAPIENS] [SR:,HUMAN] [DE:(COTRANSPORTER 4) (NA(+)/PI COTRANSPORTER 4)] [SP:O00476] [DB:swissprot] >gp:[GI:g2062692] [LN:HSU90545] [AC:U90545] [PN:sodium phosphate transporter] [GN:NPT4] [OR:Homo sapiens] [SR:human] [DB:genpept-pri2] [DE:Human sodium phosphate transporter (NPT4) mRNA, complete cds.] [LE:377] [RE:1582] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_32614078_f2_539 1143 4915 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_32664093_f2_568 1144 4916 627 208 142 6.7e-10 Description pir:[LN:G70418] [AC:G70418] [PN:probable thiamine phosphate synthase 2] [GN:thiE1] [CL:probable thiamin-phosphate pyrophosphorylase: thiamin-phosphate pyrophosphorylase homology] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983767] [LN:AE000736] [AC:AE000736:AE000657] [PN:thiamine phosphate synthase] [GN:thiE1] [ER:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 68 of 109 of the complete genome.] [LE:15292] [RE:15852] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33203385_c3_1997 1145 4917 597 198 967 2.5e-97 Description gp:[GI:g2978430] [LN:SEU43366] [AC:U43366] [PN:IcaR] [GN:icaR] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis operon mediating intercellular adhesion:IcaR, IcaA, IcaD, IcaB, and IcaC genes, complete cds.] [LE:39] [RE:596] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33209682_c2_1718 1146 4918 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33211092_f3_1123 1147 4919 471 156 72 0.030 Description sp:[LN:VL02_VARV] [AC:P33041] [GN:L2R:M2R] [OR:VARIOLA VIRUS] [DE:PROTEIN L2] [SP:P33041] [DB:swissprot] >pir:[LN:S33088] [AC:S33088:H36844] [PN:L2R protein:M2R protein] [CL:vaccinia virus F3 protein] [OR:variola virus] [DB:pir2] >gp:[GI:g262433] [LN:S55844] [AC:S55844] [GN:L2R] [OR:Variola major virus] [SR:Variola major virus India-1967] [DB:genpept-vrl] [DE:G9R . . . H7R Evariola major virus, India-1967, Genomic, 19 genes, 18029 nt].] [NT:This sequence comes from FIG. 2.] [LE:1860] [RE:2123] [DI:direct] >gp:[GI:g438992] [LN:VARCG] [AC:L22579] [OR:Variola major virus] [SR:Variola major virus (strain Bangladesh-1975) DNA] [DB:genpept-vrl] [DE:Variola major virus (strain Bangladesh-1975) complete genome.] [NT:homolog of vaccinia virus CDS L2R; putative] [LE:69256] [RE:69519] [DI:direct] >gp:[GI:g297254] [LN:VVCGAA] [AC:X69198] [GN:M2R] [OR:Variola virus] [DB:genpept-vrl] [DE:Variola virus DNA complete genome.] [SP:P33041] [LE:68623] [RE:68886] [DI:direct] >gp:[GI:g62350] [LN:VVHINDQKH] [AC:X67119] [GN:L2R COP] [OR:Variola virus] [DB:genpept-vrl] [DE:Variola virus (HindIII-Q, K, H, M, L, I, F genome fragment) genes.] [SP:P33041] [LE:18508] [RE:18771] [DI:direct] >gp:[GI:e92818:g1143683] [LN:VVL8R] [AC:X76267] [OR:Variola virus] [DB:genpept-vrl] [DE:Variola virus (Garcia-1966) L8R, I1L, I3R, I2L, I4L, I5R, I5.5R, I6R, I7L, I8R, I9R, N1R, N2R, N3L, N4R and N5R genes.] [NT:ORF13R] [SP:P33041] [LE:10592] [RE:10855] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33219007_f3_1152 1148 4920 375 124 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33241093_c2_1806 1149 4921 1557 518 1634 5.2e-168 Description pir:[LN:A69759] [AC:A69759] [PN:1-pyrroline-5-carboxylate dehydrogenase homolog ycgN] [GN:ycgN] [CL:aldehyde dehydrogenase (NAD+):aldehyde dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182273:g2632607] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ycgN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to 1-pyrroline-5-carboxylate dehydrogenase] [LE:150401] [RE:151948] [DI:direct] >gp:[GI:d1009590:g1805393] [LN:D50453] [AC:D50453] [PN:68% identity protein to] [GN:ycgN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing the amyE-srfA region, complete cds.] [LE:24702] [RE:26249] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33242842_c1_1579 1150 4922 2871 956 315 2.0e-24 Description pir:[LN:S59797] [AC:S59797] [PN:hypothetical protein YDR332w:hypothetical protein D9798.1] [CL:unassigned DEAD/H box helicases:DEAD/H box helicase homology] [OR:Saccharomyces cerevisiae] [DB:pir2] [MP:4R] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33250287_c1_1513 1151 4923 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33304082_f1_387 1152 4924 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33359381_c2_1697 1153 4925 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33391337_c2_1891 1154 4926 864 287 168 2.1e-12 Description gp:[GI:g4894301] [LN:AF065404] [AC:AF065404] [PN:pXO1–85] [OR:Bacillus anthracis] [DB:genpept-bct2] [DE:Bacillus anthracis virulence plasmid PX01, complete sequence.] [LE:99636] [RE:100319] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33595087_c2_1645 1155 4927 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33620176_c3_2091 1156 4928 858 285 494 3.3e-47 Description gp:[GI:d1020251:g1943993] [LN:AB001896] [AC:AB001896] [GN:orf30] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:912) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for sigma70 operon, complete cds.] [LE:1501] [RE:2310] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33837817_c1_1431 1157 4929 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33985007_f3_1266 1158 4930 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_33988778_f2_888 1159 4931 660 219 636 3.0e-62 Description pir:[LN:JC4511] [AC:JC4511] [PN:pyroglutamyl-peptidase I,:bacterial pyrrolidone carboxyl peptidase (PYRase)] [GN:pcp] [OR:Staphylococcus aureus] [EC:3.4.19.3] [DB:pir2] >gp:[GI:g790573] [LN:SAU19770] [AC:U19770] [PN:pyrrolidone carboxyl peptidase] [GN:pcp] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus pyrrolidone carboxyl peptidase (pcp) gene, complete cds.] [NT:pyrase] [LE:204] [RE:842] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34016937_c1_1600 1160 4932 1383 460 1178 1.1e-119 Description pir:[LN:C69670] [AC:C69670] [PN:glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA] [GN:opuCA] [CL:glycine betaine/proline transport protein proV:ATP-binding cassette homology:CBS homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2271389] [LN:AF009352] [AC:AF009352] [PN:ATPase] [GN:opuCA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis osmoprotectant transport system OpuC including ATPase (opuCA), transmembrane protein (opuCB), osmoprotectant binding protein precursor (opuCC) and transmembrane protein (opuCD) genes, complete cds.] [NT:OpuCA; part of the osmoprotectant transport system] [LE:860] [RE:2002] [DI:direct] >gp:[GI:e1186071:g2635896] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCA] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name: yvbE] [LE:69373] [RE:70515] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34021912_c2_1736 1161 4933 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3402312_c1_1529 1162 4934 1761 586 1316 2.6e-134 Description pir:[LN:G69769] [AC:G69769] [PN:pyruvate oxidase homolog ydaP] [GN:ydaP] [CL:acetolactate synthase large chain:thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020024:g1881244] [LN:AB001488] [AC:AB001488] [GN:ydaP] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:SIMILAR TO PYRUVATE OXIDASE AND ACETOLACTATE] [LE:21889] [RE:23613] [DI:direct] >gp:[GI:e1182400:g2632734] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydaP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to pyruvate oxidase] [LE:85633] [RE:87357] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34033563_c1_1627 1163 4935 327 108 388 5.7e-36 Description gp:[GI:e1429590:g4756150] [LN:A67161] [AC:A67161] [FN:NIRD GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 1 from Patent EP0805205.] [NT:unnamed protein product] [LE:2589] [RE:2903] [DI:direct] >gp:[GI:g4433640] [LN:AF029224] [AC:AF029224:AF029225] [PN:NirD] [GN:nirD] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to Escherichia coli NADH-dependent nitrite] [LE:4774] [RE:5088] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34094136_f1_408 1164 4936 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34157807_f2_816 1165 4937 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34194002_c2_1941 1166 4938 711 236 657 1.8e-64 Description sp:[LN:PMGY_ZYMMO] [AC:P30798] [GN:PGM] [OR:ZYMOMONAS MOBILIS] [EC:5.4.2.1] [DE:(BPG-DEPEND[NT PGAD4)] [SP:P30798] [DB:swissprot] >pir:[LN:C40649] [AC:C40649] [PN:phosphoglycerate mutase,] [CL:phosphoglycerate mutase:phosphoglycerate mutase homology] [OR:Zymomonas mobilis] [EC:5.4.2.1] [DB:pir2] >gp:[GI:g155611] [LN:ZMOPGMA] [AC:L09651] [PN:phosphoglyceromutase] [GN:pgm] [OR:Zymomonas mobilis] [SR:Zymomonas mobilis (strain CP4) DNA] [DB:genpept-bct1] [DE:Zymomonas mobilis phosphoglyceromutase (pgm) gene, complete cds, and 2-hydroxyacid dehydrogenase homologue (ddh) gene, 5′ end.] [LE:317] [RE:1003] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34197318_f3_1128 1167 4939 903 300 1117 3.2e-113 Description pir:[LN:A49943] [AC:A49943:S33358] [PN:fructose-bisphosphate aldolase,] [OR:Staphylococcus carnosus] [EC:4.1.2.13] [DB:pir2] >gp:[GI:g297874] [LN:SCFDA] [AC:X71729] [PN:fructose-bisphosphate aldolase] [GN:fda] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [EC:4.1.2.13] [DE:S. carnosus fda gene.] [SP:Q07159] [LE:667] [RE:1557] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34273436_f2_498 1168 4940 855 284 372 2.8e-34 Description sp:[LN:YQJG_BACSU] [AC:P54544] [GN:YQJG] [OR:BACILLUS SUBTILIS] [DE:PRECURSOR] [SP:P54544] [DB:swissprot] >pir:[LN:G69963] [AC:G69963] [PN:lipoprotein SpoIIIJ-like homolog yqjG] [GN:yqjG] [CL:stage III sporulation protein:stage III sporulation protein homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013293:g1303958] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqjG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:234919] [RE:235746] [DI:complement] >gp:(GI:e1185657:g2634823] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to lipoprotein SpoIIIJ-like] [SP:P54544] [LE:87873] [RE:88700] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34385012_f2_465 1169 4941 1362 453 364 6.0e-40 Description pir:[LN:S62194] [AC:S62194] [PN:hypothetical protein 4] [CL:dipeptide transport protein] [OR:Methanosarcina barkeri] [DB:pir2] >gp:[GI:e212291:g1124957] [LN:MBFMDSUBS] [AC:X93084] [GN:orf4] [OR:Methanosarcina barkeri] [DB:genpept-bct1] [DE:M. barkeri fmdE, fmdF, fmdA, fmdC, fmdD, fmdB, orf4, orf3, orf2, and or f1 genes.] [LE:<1] [RE:1588] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34410843_c2_1690 1170 4942 1431 476 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000895_34412952_c3_2210 1171 4943 783 260 580 2.6e-56 Description sp:[LN:YBBM_ECOLI] [AC:P77307] [GN:YBBM] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 28.2 KD PROTEIN IN USHA-TESA INTERGENIC REGION] [SP:P77307] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI75303000985_34414192_c3_2229 1172 4944 831 276 113 0.00012 Description pir:[LN:F69104] [AC:F69104] [PN:3′,5′-cyclic-nucleotide phosphodiesterase, cpdA homolog MTH178:Icc related protein] [GN:MTH178] [CL:3′,5′-cyclic-nucleotide phosphodiesterase cpdA:3′,5′-cyclic-nucleotide phosphodiesterase cpdA homology:phosphoesterase core homology] [OR:Methanobacterium thermoautotrophicum] [EC:3.1.4.17] [DB:pir1] >gp:[GI:g2621221] [LN:AE000805] [AC:AE000805:AE000666] [PN:Icc related protein] [GN:MTH178] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct1] [DE:Methanobacterium thermoautotrophicum from bases 114371 to 125512 (section 11 of 148) of the complete genome.] [NT:Function Code:10.02 - Metabolism of Macromolecules,] [LE:10465] [RE:11055] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34430428_c2_1949 1173 4945 375 124 83 0.0051 Description pir:[LN:C69776] [AC:C69776] [PN:hypothetical protein yddJ] [GN:yddJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020089:g1881309] [LN:AB001488] [AC:AB001488] [GN:yddJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:78831] [RE:79211] [DI:direct] >gp:[GI:e1182465:g2632799] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:yddJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [LE:142576] [RE:142956] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34554692_f1_62 1174 4946 474 157 403 1.5e-37 Description gp:[GI:g1575025] [LN:SAU52961] [AC:U52961] [PN:holin-like protein LrgA] [GN:lrgA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus strain = NCTC 8325-4] [DB:genpept-bct2] [DE:Staphylococcus aureus holin-like protein LrgA (lrgA) and LrgB (lrgB) genes, complete cds.] [NT:LytSR-regulated gene; similar to E. coli yohJ] [LE:369] [RE:812] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34585317_c2_1938 1175 4947 1491 496 130 2.6e-05 Description gp:[GI:g454844] [LN:SCMP48EGG] [AC:M74170] [OR:Schistosoma mansoni] [SR:Schistosoma mansoni (strain NMRI) female adult worm DNA] [DB:genpept-inv1] [DE:Schistosoma mansoni p48 eggshell protein gene, complete cds.] [NT:ORF 3] [LE:687] [RE:1868] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34617937_f3_1227 1176 4948 525 174 223 1.3e-17 Description gp:[GI:g2952545] [LN:AF051898] [AC:AF051898] [PN:coronin binding protein] [GN:DB10] [OR:Dictyostelium discoideum] [DB:genpept-inv1] [DE:Dictyostelium discoideum coronin binding protein (DB10) mRNA, complete cds.] [LE:108] [RE:1790] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_34647150_c1_1439 1177 4949 1356 451 274 1.6e-23 Description gp:[GI:g2570198] [LN:LSU54556] [AC:U54556] [PN:microfilarial sheath protein SHP3] [GN:shp3] [OR:Litomosoides sigmodontis] [DB:genpept-inv1] [DE:Litomosoides sigmodontis microfilarial sheath proteins SHP3a (shp3a) and SHP3 (shp3) genes, complete cds.] [NT:structural protein; similar to shp3 genes from] [LE:7991:8260] [RE:8047:9219] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35193950_c2_1811 1178 4950 489 162 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35317188_c2_1684 1179 4951 6414 2137 2779 2.4e-289 Description gp:[GI:g3929312] [LN:AF100426] [AC:AF100426] [PN:fimbriae-associated protein Fap1] [GN:fap1] [OR:Streptococcus parasanguinis] [DB:genpept-bct2] [DE:Streptococcus parasanguis fimbriae-associated protein Fap1 (fap1) gene, complete cds.] [NT:invovled in fimbriae assembly and fimbriae-mediated] [LE:284] [RE:7996] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35433438_f3_1030 1180 4952 1137 378 420 2.3e-39 Description sp:[LN:GLOX_BACSU] [AC:O31616] [GN:YJBR] [OR:BACILLUS SUBTILIS] [EC:1.5.3.-] [DE:GLYCINE OXIDASE,] [SP:O31616] [DB:swissprot] >pir:[LN:B69845] [AC:B69845] [PN:sarcosine oxidase homolog yjbR] [GN:yjbR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183187:g2633521] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to sarcosine oxidase] [SP:O31616] [LE:48816] [RE:49925] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35449093_c2_1668 1181 4953 831 276 103 0.0069 Description sp:[LN:YHI3_LACLA] [AC:Q02147] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [DE:HYPOTHETICAL 38.0 KD PROTEIN IN HISC-HISG INTERGENIC REGION (ORF3)] [SP:Q02147] [DB:swissprot] >pir:[LN:C45734] [AC:C45734] [PN:histidyl-tRNA synthetase homolog] [OR:Lactococcus lactis subsp. lactis]LDB:pir2] >gp:[GI:g2565140] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:unknown] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:ORF2; potential regulator; similar to histidyl-tRNA] [LE:2146] [RE:3132] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35687_f2_812 1182 4954 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35817137_f3_1254 1183 4955 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35993802_c2_1685 1184 4956 1584 527 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_35995316_f1_393 1185 4957 1257 418 2160 9.6e-224 Description pir:[LN:S77608] [AC:S77608] [PN:probable intercellular adhesion protein A:glycosyltransferase:icaA protein] [GN:icaA] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g1161380] [LN:SEU43366] [AC:U43366] [PN:IcaA] [GN:icaA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis operon mediating intercellular adhesion:IcaR, IcaA, IcaD, IcaB, and IcaC genes, complete cds.] [LE:761] [RE:1999] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36127302_c2_1875 1186 4958 888 295 1058 5.7e-107 Description sp:[LN:GTAB_BACSU] [AC:Q05852] [GN:GTAB] [OR:BACILLUS SUBTILIS] [EC:2.7.7.9] [DE:(GENERAL STRESS PROTEIN 33) (G5P33)] [SP:Q05852] [DB:swissprot] >pir:[LN:A40650] [AC:A40650:B69638] [PN:UTP--glucose-1-phosphate uridylyltransferase,:UDP-glucose pyrophosphorylase] [GN:gtaB] [CL:Escherichia coli UTP--glucose-1-phosphate uridylyltransferase] [OR:Bacillus subtilis] [EC:2.7.7.9] [DB:pirl] >gp:[GI:g289287] [LN:BACGTABX] [AC:L12272] [PN:UDP-glucose pyrophosphorylase] [GN:gtaB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [EC:2.7.7.9] [DE:Bacillus subtilis UDP-glucose pyrophosphorylase (gtaB) gene, complete cds.] [NT:similar to UDP-glucose pyrophosphorylase of] [LE:120] [RE:9981 [DI:direct] >gp:[GI:g405623] [LN:BSLYTGTA] [AC:Z22516] [PN:UDP-glucose pyrophosphorylase] [GN:gtaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.9] [DE:B. subtilis lytR, orfX, and gtaB genes.] [NT:similar to other procaryotic UDP-glucose] [SP:Q05852] [LE:1581] [RE:2459] [DI:direct] >gp:[GI:e1184473:g2636093] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UTP-glucose-1-phosphate uridylyltransferase] [GN:gtaB] [FN:glucosylation of teichoic acid] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.9] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:Q05852] [LE:67599] [RE:68477] [DI:direct] >gp:[GI:e1184473:g2636093] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UTP-glucose-1-phosphate uridylyltransferase] [GN:gtaB] [FN:glucosylation of teichoic acid] [OR:Bacillus subtilis] [DB:genpept] [EC:2.7.7.9] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:Q05852] [LE:67599] [RE:68477] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36134678_c3_2220 1187 4959 699 232 674 2.8e-66 Description pir:[LN:F69670] [AC:F69670] [PN:glycine betaine/carnitine/choline ABC transporter (membrane p) opuCD] [GN:OpUCD] [CL:glycine betaine/carnitine/choline ABC transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2271392] [LN:AF009352] [AC:AF009352] [PN:transmembrane protein] [GN:opuCD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis osmoprotectant transport system OpuC including ATPase (opuCA), transmembrane protein (opuCB), osmoprotectant binding protein precursor (opuCC) and transmembrane protein (opuCD) genes, complete cds.] [NT:OpuCD; part of the osmoprotectant transport system] [LE:3627] [RE:4316] [DI:direct] >gp:[GI:e1186068:g2635893] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCD] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:yvbB] [LE:67059] [RE:67748] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36142510_c1_1394 1188 4960 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36151692_c2_1840 1189 4961 681 226 671 5.8e-66 Description sp:[LN:YFKO_BACSU] [AC:O34475] [GN:YFKO] [OR:BACILLUS SUBTILIS] [EC:1.-.-.-] [DE:PUTATIVE NAD(P)H NITROREDUCTASE YFKO,] [SP:O34475] [DB:swissprot] >pir:[LN:B69809] [AC:B69809] [EPN:NAD(P)H-flavin oxidoreductase homolog yfkO] [GN:yfkO] [CL:nitroreductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182773:g2633107] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfkO] [FN:unknown] [OR:Bacillus Subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to NAD(P)H-flavin oxidoreductase] [SP:O34475] [LE:51099] [RE:51764] [DI:direct] >gp:[GI:d1024284:g2626827] [LN:D83967] [AC:D83967] [PN:YfkO] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 74 degree region.] [LE:16157] [RE:16822] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36205285_c2_1717 1190 4962 780 259 284 6.0e-25 Description sp:[LN:XYNC_CALSA] [AC:P23553] [GN:XYNC] [OR:CALDOCELLUM SACCHAROLYTICUM] [SR:, CALDICELLULOSIRUPTOR SACCHAROLYTICUS] [EC:3.1.-.-] [DE:ACETYL ESTERASE, (ACETYLXYLOSIDASE)] [SP:P23553] [DB:swissprot] >pir:[LN:B37202] [AC:B37202] [PN:acetylesterase, (XyriC)] [OR:Caldocellum saccharolyticum] [EC:3.1.1.6] [DB:pir2] >gp:[GI:g144297] [LN:CDCXYNAB] [AC:M34459] [OR:Caldicellulosiruptor saccharolyticus] [SR:C. saccharolyticum DNA, clone pNZ1400] [DB:genpept-bct1] [DE:C. saccharolyticum xylanase A (XynA), beta-xylosidase (XynB) and acetyl esterase (XynC) genes, complete cds.] [NT:acetyl esterase (XynC)] [LE:1257] [RE:2057] [DI:direct] >gp:[GI:g2645420] [LN:AF005383] [AC:AF005383] [PN:acetylxylosidase] [GN:XynC] [OR:Caldicellulosiruptor saccharolyticus] [DB:genpept-bct2] [DE:Caldicellulosiruptor saccharolyticus putative transport protein (XynG), putative transport protein (XynH), xylanase (XynF), xylanase (XynE), xylanase (XynD), xylanase (XynA), acetylxylosidase (XynC) and xylanase (XynB) genes, complete cds.] [LE:13673] [RE:14473] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36214052_c3_1981 1191 4963 999 332 169 1.3e-10 Description sp:[LN:Y31K_SULAC] [AC:P46218] [OR:SULFOLOBUS ACIDOCALDARIUS] [DE:HYPOTHETICAL 31.5 KD PROTEIN] [SP:P4G2l8] [DB:swissprot] >gp:[GI:g458265] [LN:SAU05664] [AC:U05664] [OR:Sulfolobus acidocaldarius] [DB:genpept-bct1] [DE:Sulfolobus acidocaldarius RNA polymerase subunit homolog gene, complete cds.] [NT:homologous to Swiss-Prot Accession Number P20435:] [LE:61] [RE:888] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36225250_c2_1711 1192 4964 1542 513 2622 1.1e-272 Description sp:[LN:SEPA_STAEP] [AC:P43148] [GN:SEPA] [OR:STAPHYLOCOCCUS EPIDERMIDIS] [EC:3.4.24.-] [DE:EXTRACELLULAR ELASTASE PRECURSOR, (SEPP1)] [SP:P43148] [DB:swissprot] >pir:[LN:A40659] [AC:A40659] [PN:elastase, SepP1] [OR:Staphylococcus epidermidis] [EC:3.4.24.-] [DB:pir2] >gp:[GI:g396259] [LN:SESEPP1A] [AC:X69957] [PN:protease] [GN:SepP1] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermis gene for protease.] [SP:P43148] [LE:164] [RE:1687] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36228252_c3_1990 1193 4965 777 258 678 1.1e-66 Description sp:[LN:HIS6_BACSU] [AC:O34727] [GN:HISF] [OR:BACILLUS SUBTILIS] [DE:HISF PROTEIN (CYCLASE)] [SP:O34727] [DB:swissprot] >pir:[LN:B69641] [AC:B69641] [PN:HisF cyclase-like protein hisF] [GN:hisF] [CL:cyclase hisF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186175:g2636000] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:HisF cyclase-like protein] [GN:hisF] [FN:synthesis of D-erythro-imidazole glycerol] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [SP:O34727] [LE:183072] [RE:183830] [DI:complement] >gp:[GI:g2618870] [LN:AF017113] [AC:AF017113] [PN:cyclase] [GN:hisF] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [NT:HisF protein] [LE:44003] [RE:44761] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36366326_c2_1646 1194 4966 771 256 409 3.4e-38 Description pir:[LN:B69906] [AC:B69906] [PN:rarD protein homolog yojE] [GN:yojE] [CL:Escherichia coli rarD protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185420:g2634341] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yojE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] [NT:similar to hypothetical proteins] [LE:122204] [RE:122995] [DI:complement] >gp:[GI:g3169320] [LN:AF026147] [AC:AF026147] [PN:YojD] [GN:yojD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis YojA (yojA), YojB (yojB), YojC (yojC), YojD (yojD), YojE (yojE), YojF (yojF), YojG (yojG), YojH (yojH), YojI (yojI), YojJ (yojJ), YojK (yojK), YojL (yojL), YojM (yojM), YojN (yojN), and YojO (yojO) genes, complete cds; and OdhA (odhA) gene,partial cds.] [NT:similar to Escherichia coli RarD protein:] [LE:2270] [RE:3061] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_36617832_c1_1459 1195 4967 801 266 758 3.5e-75 Description sp:[LN:SUMT_BACME] [AC:P29928] [GN:COBA] [OR:BACILLUS MEGATERIUM] [EC:2.1.1.107] [DE:(METHYLASE) (SUMT) (UROPORPHYRINOGEN III METHYLASE) (UROM)] [SP:P29928] [DB:swissprot] >pir:[LN:A42479] [AC:A42479] [PN:S-adenosyl-L-methionine uroporphyrinogen III methyltransferase] [CL:S-adenosyl-L-methionine uroporphyrinogen methyltransferase] [OR:Bacillus megaterium] [DB:pir2] >gp:[GI:g142695] [LN:BACCOBA] [AC:M62881] [PN:S-adenosyl-L-methionine:uroporphyrinogen III] [GN:COBA] [ER:Bacillus megaterium] [SR:Bacillus megaterium DNA] [DB:genpept-bct1] [DE:Bacillus megaterium S-adenosy-L-methionine:uroporphyrinogen III methyltransferase (COBA) gene, complete cds.] [NT:ATCC #1078] [LE:119] [RE:835] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_38876_f2_481 1196 4968 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3906718_f1_67 1197 4969 1065 354 747 5.2e-74 Description pir:[LN:H69789] [AC:H69789] [PN:L-iditol 2-dehydrogenase, homolog ydjL:sorbitol dehydrogenase homolog] [GN:ydjL] [CL:alcohol dehydrogenase:long-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [EC:1.1.1.14] [DB:pir1] >gp:[GI:d1023636:g25220161 [LN:AB007638] [AC:AB007638] [PN:dehydrogenase] [GN:ydjL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:Marburg 168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA containing gutA to cotA region, 48 degree.] [NT:putative] [LE:9403] [RE:10443] [DI:complement] >gp:[GI:e1182603:g2632937] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydjL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to L-iditol 2-dehydrogenase] [LE:76928] [RE:779681 [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3909376_c2_1681 1198 4970 396 131 244 1.0e-20 Description pir:[LN:H64716] [AC:H64716] [PN:ABC transporter, ATP-binding protein] [CL:ATP-binding cassette homology] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2314761] [LN:AE000655] [AC:AE000655:AE000511] [PN:ABC transporter, ATP-binding protein (abc)] [GN:HP1576] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 133 of 134 of the complete genome.] [NT:similar to GB:L42023 SP:P44785 PID:1005459] [LE:1828] [RE:2811] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3910675_f3_1222 1199 4971 234 77 57 0.0048 Description gp:[GI:g3293452] [LN:AF069160] [AC:AF069160] [PN:NADH dehydrogenase 1] [FN:respiratory enzyme] [OR:Mitochondrion Aphidius ervi] [SR:Aphidius ervi] [DB:genpept-inv1] [DE:Aphidius ervi NADH dehydrogenase 1 gene, mitochondrial gene encoding mitochondrial protein, partial cds.] [LE:<1] [RE:>465] [DI:direct] >gp:[GI:g3293458] [LN:AF069163] [AC:AF069163] [PN:NADH dehydrogenase 1] [FN:respiratory enzyme] [OR:Mitochondrion Aphidius picipes] [SR:Aphidius picipes] [DB:genpept-inv1] [DE:Aphidius picipes NADH dehydrogenase 1 gene, mitochondrial gene encoding mitochondrial protein, partial cds.] [LE:<1] [RE:>465] [DI:direct] >gp:[GI:g3293460] [LN:AF069164] [AC:AF069164] [PN:NADH dehydrogenase 1] [FN:respiratory enzyme] [OR:Mitochondrion Aphidius pisivorus] [SR:Aphidius pisivorus] [DB:genpept-inv1] [DE:Aphidius pisivorus NADH dehydrogenase 1 gene, mitochondrial gene encoding mitochondrial protein, partial cds.] [LE:<1] [RE:>465] [DI:direct] >gp:[GI:g3293464] [LN:AF069166] [AC:AF069166] [PN:NADH dehydrogenase 1] [FN:respiratory enzyme] [OR:Mitochondrion Aphidius sonchi] [SR:Aphidius sonchi] [DB:genpept-inv1] [DE:Aphidius sonchi NADH dehydrogenase 1 gene, mitochondrial gene encoding mitochondrial protein, partial cds.] [LE:<1] [RE:>465] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3923842_c2_1832 1200 4972 891 296 876 1.1e-87 Description gp:[GI:g4959402] [LN:AF115391] [AC:AF115391] [PN:putative ribose transporter RbsU] [GN:rbsU] [OR:Lactobacillus sakei] [DB:genpept-bct2] [DE:Lactobacillus sakei LaaA (laaA) gene, partial cds; LaaB (laaB), putative acetate kinase AckA (ackA), LaaC (laaC) genes, complete cds; rbs operon, complete sequence; and LaaE (laaE) gene, partial cds.] [LE:3130] [RE:4014] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3928162_f2_665 1201 4973 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3928416_f1_170 1202 4974 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3933177_f2_683 1203 4975 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3941078_f1_114 1204 4976 324 107 110 1.6e-06 Description pir:[LN:C69845] [AC:C69845] [PN:hypothetical protein yjbS] [GN:yjbS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183188:g2633522] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:49925] [RE:50125] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3941436_f1_6 1205 4977 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3953400_f1_314 1206 4978 195 64 49 0.017 Description sp:[LN:RFA1_KLEPN] [AC:Q484751 [GN:RFBA] [OR:KLEBSIELLA PNEUMONIAE] [DE:O-ANTIGEN EXPORT SYSTEM PERMEASE PROTEIN RFBA] [SP:Q48475] [DB:swissprot] >pir:[LN:560882] [AC:560882] [PN:integral membrane O-antigen translocator protein rfbA] [GN:rfbA] [CL:integral membrane O-antigen translocator protein rfbA] [OR:Klebsiella pneumoniae] [DB:pir2] >gp:[GI:g567182] [LN:KPNRFBA] [AC:L31775] [PN:integral membrane O-antigen translocator] [GN:wzm] [OR:Klebsiella pneumoniae] [DB:genpept-bct2] [DE:Klebsiella pneumoniae integral membrane O-antigen translocator protein (wzm) and ATP-binding protein (wzt) genes, complete cds; and WbbM (wbbM) gene, partial cds.] [NT:similar to kpsM (E. coli), bexA (H. influenzae),] [LE:324] [RE:1103] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4004643_f3_1285 1207 4979 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4069643_c3_2243 1208 4980 480 159 160 8.2e-12 Description gp:[GI:e1310302:g3294247] [LN:SC7C7] [AC:AL031031] [PN:hypothetical protein SC7C7.14] [GN:SC7C7.14] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 7C7.] [NT:5C7C7.14, unknown, len:161 aa] [LE:24125] [RE:24610] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4079552_f2_696 1209 4981 630 209 87 0.0012 Description gp:[GI:g252560] [LN:54406852] [AC:S44069] [GN:VP4/VP2] [OR:Hepatitis A virus] [SR:Hepatitis A virus LSH/S] [DB:genpept-vrl] [DE:VPl . . . 3C/3D [hepatitis A virus HAy, LSH/S, Genomic, 6 genes, 2GGnt, segment 2 of 7].] [NT:This sequence comes from FIG. 3.] [LE:1] [RE:266] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4079626_f1_336 1210 4982 192 63 70 0.018 Description sp:[LN:UTMP_BOVIN] [AC:P46201] [OR:BOS TAURUS] [SR:,BOVINE] [DE:UTERINE MILK PROTEIN PRECURSOR (UTMP)] [SP:P46201] [DB:swissprot] >gp:[GI:g438481] [LN:BOVSPIS] [AC:L22095] [PN:serine proteinase inhibitor precursor] [OR:Bos taurus] [DB:genpept-mam] [DE:Bos taurus uterine milk protein precursor, mRNA, complete cds.] [NT:uterine milk protein] [LE:19] [RE:1398] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4084635_f2_483 1211 4983 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4084717_f3_961 1212 4984 621 206 110 0.00027 Description pir:[LN:B70045] [AC:B70045] [PN:hypothetical protein yvpB] [GN:yvpB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186182:g2636007] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvpB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [LE:189121] [RE:189873] [DI:direct] >gp:[GI:g2618863] [LN:AF017113] [AC:AF017113] [PN:YvpB] [GN:yvpB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:37960] [RE:38712] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4093932_f1_69 1213 4985 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4094703_c1_1446 1214 4986 2022 673 224 3.7e-21 Description pir:[LN:B70001] [AC:B70001] [PN:ABC transporter (permease) homolog ytsD] [GN:ytsD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185910:g2635521] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to ABC transporter (permease)] [LE:110708] [RE:112648] [DI:complement] >gp:[GI:g2293178] [LN:AF008220] [AC:AF008220] [PN:YtsD] [GN:ytsD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to NADH dehydrogenase] [LE:67779] [RE:69719] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_40966_c3_2016 1215 4987 1626 541 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4098518_f1_48 1216 4988 711 236 121 5.8e-08 Description sp:[LN:ARP_PLAFA] [AC:P04931] [OR:PLASMODIUM FALCIPARUM] [DE:ASPAPAGINE-RICH PROTEIN (AG319) (ARP) (FRAGMENT)] [SP:PO4931] [DB:swissprot] >pir:[LN:A23770] [AC:A23770] [PN:asparagine-rich protein] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g160092] [LN:PFAARP] [AC:M24328:X03716] [PN:asparagine-rich protein] [GN:Ag319] [OR:Plasmodium falciparum] [SR:Plasmodium falciparum (Ghanaian isolate NF7) asexual bloodstage] [DB:genpept-inv1] [DE:Plasmodium falciparum asparagine-rich protein (ARP), partial cds.] [LE:1] [RE:1612] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4100453_c3_2260 1217 4989 1044 347 329 1.0e-20 Description sp:[LN:DEGS_BACBR] [AC:P54663] [GN:DEGS] [OR:BACILLUS BREVIS] [EC:2.7.3.-] [DE:SENSOR PROTEIN DEGS,] [SP:P54663] [DB:swissprot] >pir:[LN:I39834] [AC:I39834] [PN:protein kinase] [GN:degS] [CL:regulatory protein degS] [OR:Bacillus brevis] [DB:pir2] >gp:[GI:g710495] [LN:BACDEGSU] [AC:L15444] [PN:protein kinase] [GN:degS] [OR:Brevibacillus brevis] [SR:Bacillus brevis (strain Alk36) DNA] [DB:genpept-bct2] [DE:Bacillus brevis protein kinase (degs) gene, complete cds;transcriptional activator protein (degU) gene, complete cds.] [NT:putative] [LE:398] [RE:1558] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4100938_c2_1860 1218 4990 534 177 293 1.1e-25 Description sp:[LN:GUDT_BACSU] [AC:P42237] [GN:YCBE] [OR:BACILLUS SUBTILIS] [DE:PROBABLE GLUCARATE TRANSPORTER] [SP:P42237] [DB:swissprot] >pir:[LN:H69752] [AC:H69752] [PN:probalble glucarate transporter] [GN:ycbE] [CL:hexuronate transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1007040:g709999] [LN:BACYCB20] [AC:D30808] [PN:glucarate dehydratase] [GN:ycbE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168TrpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA around 20 degrees region of chromosome containing yckA-T genes.] [LE:3924] [RE:5291] [DI:direct] >gp:[GI:e1182200:g2632534] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ycbE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to glucarate transporter] [SP:P42237] [LE:75738] [RE:77105] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4110712_c1_1353 1219 4991 591 196 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4112527_f2_563 1220 4992 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4112788_c1_1497 1221 4993 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4148428_f1_160 1222 4994 1149 382 528 8.3e-51 Description sp:[LN:ADH_ALCELT] [AC:P14940] [GN:ADH] [OR:ALCALIGENES EUTROPHUS] [EC:1.1.1.1] [DE:ALCOHOL DEHYDROGENASE,] [SP:P14940] [DB:swissprot] >pir:[LN:A30196] [AC:A30196] [PN:probable alcohol dehydrogenase,] [CL:alcohol dehydrogenase:long-chain alcohol dehydrogenase homology] [OR:Alcaligenes eutrophus] [EC:1.1.1.1] [DB:pirl] >gp:[GI:g141900] [LN:AFAADH] [AC:J03362] [OR:Ralstonia eutropha] [SR:A. eutrophus (strain H16) DNA, clone SR18] [DB:genpept-bct1] [DE:A. eutrophus alcohol dehydrogenase (ADH) gene, complete cds.] [NT:alcohol dehydrogenase (EC 1.1.1.1)] [LE:458] [RE:1558] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4164026_f2_793 1223 4995 162 53 118 9.1e-09 Description pir:[LN:S68609] [AC:S68609] [PN:recombinase Sin] [CL:transposase repressor] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g495089] [LN:STASINA] [AC:L23109] [PN:recombinase] [GN:sin] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA; Transposon Tn4002 (transposable elemen] [DB:genpept-bct1] [DE:Staphylococcus aureus recombinase (sin) gene, complete cds.] [NT:putative] [LE:389] [RE:997] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4167842_f2_530 1224 4996 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4179635_c3_2003 1225 4997 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4303377_f2_610 1226 4998 270 89 81 0.0019 Description gp:[GI:g4049784] [LN:AF063866] [AC:AF063866] [PN:ORF MSV234 hypthetical protein] [GN:MSV234] [OR:Melanoplus sanguinipes entomopoxvirus] [DB genpept-vrl] [DE:[Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:201477] [RE:201830] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4329453_c1_1533 1227 4999 336 111 220 3.6e-18 Description pir:[LN:G69781] [AC:G69782.] [PN:thioredoxin homolog ydfQ] [GN:ydfQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020138:g1881358] [LN:AB001488] [AC:AB001488] [GN:ydfQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:SIMILAR TO THIOREDOXIN.] [LE:131947] [RE:132285] [DI:direct] >gp:[GI:e1182517:g2632851] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydfQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to thioredoxin] [LE:195693] [RE:196031] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4334818_f2_854 1228 5000 1566 521 111 0.018 Description pir:[LN:D71618] [AC:D71618] [PN:hypothetical protein PFB0285c] [GN:PFB0285c [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845144] [LN:AE001385] [AC:AE001385:AE001362] [PN:hypothetical protein] [GN:PFB0285c] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 22 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:303] [RE:4613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4336088_c1_2078 1229 5001 624 207 283 7.6e-25 Description pir:[LN:F69877] [AC:F69877] [PN:uroporphyrin-III C-methyltransferase homolog ylnF] [GN:ylnF] [CL:Aquifex aeolicus siroheme synthase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e332189:g2462962] [LW:BSPYREYLO] [AC:AJ000974] [PN:YlnF protein] [GN:ylnF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis pyrE to yloA gene region.] [LE:5769] [RE:6257] [DI:direct] >gp:[GI:e1185155:g2633936] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylnF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to uroporphyrin-III C-methyltransferase] [LE:36582] [RE:37070] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4379763_f3_1048 1230 5002 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4392767_c1_1619 1231 5003 435 144 196 8.0e-15 Description gp:[GI:e1314293:g3395543] [LN:SC4A2] [AC:AL031182] [PN:putative sugar transferase] [GN:SC4A2.10c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 4A2.] [NT:SC4A2.10c, probable sugar transferase, len:478;] [LE:9579] [RE:11015] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4459375_f2_830 1232 5004 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4487550_f3_980 1233 5005 1707 568 1408 4.7e-144 Description pir:[LN:D69748] [AC:D69748:140419] [PN:amino acid transporter homolog ybeC] [GN:ybeC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1034075:g3599634] [LN:AB006424) [AC:AB006424] [GN:ybeC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23 degree.] [LE:34338] [RE:35957] [DI:direct] >gp:[GI:e1182164:g2632498] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ybeC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to amino acid transporter] [LE:36687] [RE:38306] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4491713_f2_533 1234 5006 1542 513 416 6.1e-39 Description pir:[LN:F64554] [AC:F64554] [PN:guanosine pentaphosphate phosphohydrolase] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313368] [LN:AE000546] [AC:AE000546:AE000511] [PN:guanosine pentaphosphate phosphohydrolase] [GN:HP0278] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 24 of 134 of the complete genome.] [NT:similar to GB:M87049 SP:P25552 GB:M83316 PID:148183] [LE:6964] [RE:8418] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4553166_f3_1122 1235 5007 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4574012_f1_208 1236 5008 1080 359 600 2.0e-58 Description pir:[LN:JN0500] [AC:JN0500:S34967] [PN:dihydroorotate oxidase, , mitochondrial:dihydroorotate dehydrogenase] [GN:dhod] [CL:dihydroorotate oxidase] [OR:Drosophila melanogaster] [EC:1.3.3.1] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4662_f2_689 1237 5009 318 105 84 0.0046 Description gp:[GI:g4049856] [LN:AF063866] [AC:AF063866] [PN:ORF MSV064 hypothetical protein] [GN:MSVOG4] [OR:Melanoplus sanguinipes entomopoxvirus] [DB genpept-vrl] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:64316] [RE:65158] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4687705_c2_1841 1238 5010 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4687752_c1_1514 1239 5011 1185 394 773 9.1e-77 Description pir:[LN:F69863] [AC:F69863] [PN:aspartate aminotransferase homolog ykrV] [GN:ykrV] [CL:aspartate transaminase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184948:g2633729] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykrV] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to aspartate aminotransferase] [LE:30317] [RE:31513] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4689390_c3_2124 1240 5012 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4694163_c2_1791 1241 5013 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_3694652_c3_2199 1242 5014 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4695451_f2_864 1243 5015 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4698428_c2_1705 1244 5016 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4705077_f2_880 1245 5017 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4713377_f2_618 1246 5018 447 148 108 3.4e-05 Description gp:[GI:e1407826:g4493896] [LN:PFMAL3P2] [AC:AL034558] [GN:MAL3P2.18] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P2, complete sequence.] [NT:predicted using hexExon; MAL3P2.18 (PFC0245c),] [LE:84094] [RE:95895] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4719775_c3_2182 1247 5019 744 247 434 7.6e-41 Description sp:[LN:YWAC_BACSU] [AC:P39583] [GN:YWAC:IPA-7D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 24.6 KD PROTEIN IN DAE-TYRZ INTERGENIC REGION] [SP:P39583] [DB:swissprot] >pir:[LN:S39662] [AC:539662:C70050] [PN:GTP-pyrophosphokinase homolog ywaC:protein ipa-7d] [GN:ywaC] [CL:GTP pyrophosphokinase related protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413931] [LN:BSGENR] [AC:X73124] [GN:ipa-7d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39583] [LE:6981] [RE:7613] [DI:direct] >gp:[GI:e1186347:g2636383] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywaC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-7d; similar to] [SP:P39583] [LE:150346] [RE:150978] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4719827_c3_1986 1248 5020 417 138 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4720317_f2_475 1249 5021 1257 418 1659 1.2e-170 Description gp:[GI:g4574233] [LN:AF106849] [AC:AF106849] [PN:FmhA] [GN:fmhA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus FmhA (fmhA) gene, complete cds.] [NT:similar to Staphylococcus aureus FemA and FemB] [LE:201] [RE:1451] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4723510_c2_1759 1250 5022 2661 886 2374 2.0e-246 Description sp:[LN:PODK_CLOSY] [AC:P22983]LGN:PPDK] [OR:CLOSTRIDIUM SYMBIOSUM] [SR:,BACTEROIDES SYMBIOSUS] [EC:2.7.9.1] [DE:(DIKINASE)] [SP:P22983] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value A17503000985_4725068_c3_2219 1251 5023 645 214 605 5.8e-59 Description pir:[LN:D69670] [AC:D69670] [PN:glycine betaine/carnitine/choline ABC transporter (membrane p) opuCB] [GN:opuCB] [CL:glycine betaine/carnitine/choline ABC transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2271390] [LN:AF009352] [AC:AF009352] [PN:transmembrane protein] [GN:opuCB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis osmoprotectant transport system OpuC includingATPase (opuCA), transmembrane protein (opuCB), osmoprotectant binding protein precursor (opuCC) and transmembrane protein (opuCD) genes, complete cds.] [NT;OpuCB; part of the osmoprotectant transport system] [LE:2025] [RE:2678] [DI:direct] >gp:[GI:e1186070:g2635895] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:glycine betaine/carnitine/choline ABC] [GN:opuCB] [FN:high affinity transport of glycine betaine,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genone (section 18 of 21): from 3399551 to 3609060.] [NT:alternate gene name: yvbD] [LE:68697] [RE:69350] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4726636_c1_1543 1252 5024 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4727187_c2_1702 1253 5025 2889 962 617 7.4e-58 Description sp:[LN:PIP_LACLA] [AC:P49022] [GN:PIP] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [DE:PHAGE INFECTION PROTEIN] [SP:P49022] [DB:swissprot] >gp:[GI:g308861] [LN:LACPIP] [AC:L14679] [GN:pip] [FN:required for phage infection] [OR:Lactococcus lactis] [SR: Lactococcus lactis (strain C2, sub_species lacis) DNA] [DB:genpept-bct1] [DE:Lactococcus lactis pip and gerC2 genes, complete cds's, and rrggene, 5′ end of cds.] [NT:GTG start codon] [LE:391] [RE:3096] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4728187_c1_1365 1254 5026 234 77 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4735937_f3_1114 1255 5027 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4737550_c3_2248 1256 5028 759 252 387 7.3e-36 Description gp:[GI:g4433637] [LN:AF029224] [AC:AF029224:AF029225] [PN:NirR] [GN:nirR] [FN:involved in nitrite reduction] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [LE:1184] [RE:1906] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4777217_c3_2257 1257 5029 1569 522 2425 7.9e-252 Description gp:[GI:e1429596:g4756152] [LN:A67161] [AC:A67161] [FN:NARH GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 1 from Patent EP0805205.] [NT:unnamed protein product] [LE:7804] [RE:9381] [DI:direct] >gp:[GI:g3929523] [LN:AF029224] [AC:AF029224:AF029225] [PN:NarH] [GN:narH] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to Escherichia coli nitrate reductases NRA] [LE:9989] [RE:11566] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4787807_f3_984 1258 5030 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4814682_f3_1288 1259 5031 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4870907_f1_195 1260 5032 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4875316_c1_1545 1261 5033 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4875760_f1_255 1262 5034 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4876387_c3_2099 1263 5035 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4876932_c2_1733 1264 5036 249 82 74 0.013 Description gp:[GI:g1255424] [LN:CELC33G8] [AC:U53154] [GN:C33G8.3] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid C33G8.] [LE:27678:27899:28087] [RE:27848:27952:28290] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4878312_c2_1648 1265 5037 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4882893_c3_2012 1266 5038 1209 402 244 1.0e-27 Description gp:[GI:d1039027:g4512424] [LN:AB017508] [AC:AB017508] [GN:secY] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, complete cds.] [NT:secY homologue (identity of 70% to B. subtilis )] [LE:22481] [RE:23773] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4891002_c2_1834 1267 5039 1116 371 671 5.8e-66 Description pir:[LN:A43577] [AC:A43577] [PN:regulatory protein pfoR] [OR:Clostridium perfringens] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_4980378_c1_1635 1268 5040 537 178 578 4.2e-56 Description gp:[GI:g4096799] [LN:SCU40158] [AC:U40158] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus response regulator-like protein (orfx) gene, partial cds.] [NT:orfx; function unknown; similar to response] [LE:<1] [RE:560] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5117137_c2_1827 1269 5041 459 152 499 9.8e-48 Description pir:[LN:G70069] [AC:G70069] [PN:capsular polyglutamate biosynthesis homolog ywtA] [GN:ywtA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184495:g2636114] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to capsular polyglutamate biosynthesis] [LE:100949] [RE:101398] [DI:complement] >gp:[GI:e308089:g1894766] [LN:BSZ92954] [AC:Z92954] [GN:ywtA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis yws [A, B, C, D, E, F, G] and gerBC genes.] [NT:product highly similar to Bacillus anthracis CapC] [LE:1084] [RE:1533] [DI:direct] >gp:[GI:e1184495:g2636114] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:similar to capsular polyglutamate biosynthesis] [LE:100949] [RE:101398] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5128425_f2_821 1270 5042 1878 625 477 2.1e-45 Description pir:[LN:F69848] [AC:F69848] [PN:transcription antiterminator BglG family homolog yjdC] [GN:yjdC] [CL:phosphotransferase system mannitol-specific enzyme II factor III homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183220:g2633554] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjdC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to transcriptional antiterminator (BglG] [LE:75712] [RE:77658] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5133562_f2_656 1271 5043 222 73 180 6.3e-14 Description pir:[LN:F70041] [AC:F70041] [PN:probable mercuric ion-binding protein yvgY:periplasmic mercuric ion-binding protein merP homolog] [GN:yvgY] [CL:mercuric resistance operon regulatory protein:heavy-metal-associated homology] [OR:Bacillus subtilis] [DB:pirl] >gp:[GI:e1186039:g2635864] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to mercuric transport protein] [LE:43125] [RE:43334] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5136002_c2_1691 1272 5044 366 121 136 2.9e-09 Description pir:[LN:C70043] [AC:C70043] [PN:hypothetical protein yvlA] [GN:yvlA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186201:g2636026] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [LE:207957] [RE:208283] [DI:complement] >gp:[GI:e1184419:g2636039] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [LE:10417] [RE:10743] [DI:complement] >gp:[GI:g2618844] [LN:AF017113] [AC:AF017113] [PN:YvlA] [GN:yvlA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:19550] [RE:19876] [DI:direct] >gp:[GI:e1184419:g2636039] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [LE:10417] [RE:10743] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5203452_c3_1989 1273 5045 579 192 398 5.0e-37 Description sp:[LN:HIS5_LACLA] [AC:Q02132] [GN:HISH] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:2.4.2.-] [DE:ANIDOTRANSFERASE HISH,] [SP:Q02132] [DB:swissprot] >pir:[LN:I45734] [AC:I45734] [PN:HisH] [CL:amidotransferase hisH] [OR:Lactococcus lactis subsp. lactis] [DB:pir2] >gp:[GI:g2565145] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:HisH] [GN:hish] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:aminotransferase] [LE:7295] [RE:7903] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5281568_f3_1043 1274 5046 504 167 330 8.0e-30 Description pir:[LN:C64897] [AC:C64897] [PN:probable phosphinothricin N-acetyltransferase,] [CL:phosphinothricin N-acetyltransferase] [OR:Escherichia coli] [EC:2.3.1.-] [DB:pir2] >gp:[GI:g1787719] [LN:AE000241] [AC:AE000241:U00096] [PN:putative resistance protein] [GN:b1448] [FN:putative transport; Drug/analog sensitivity] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 131 of 400 of the complete genome.] [NT:f172; 38 pct identical (3 gaps) to 169 residues of] [LE:9570] [RE:10088] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5290675_c3_2108 1275 5047 405 134 411 2.1e-38 Description sp:[LN:PAND_BACSU] [AC:P52999] [GN:PAND] [OR:BACILLUS SUBTILIS] [EC:4.1.1.11] [DE:(DECARBOXYLASE)] [SP:P52999] [DB:swissprot] >pir:[LN:A69672] [AC:A69672] [PN:aspartate 1-decarboxylase panD] [GN:panD] [CL:aspartate 1-decarboxylase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1146242] [LN:BACYPIA] [AC:L47709] [PN:aspartate 1-decarboxylase] [GN:panD] [FN:pantothenic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.1.11] [DE:Bacillus subtilis (clone YAC15-6B) ypiABF genes, qcrABC genes, ypjABCDEFGHI genes, birA gene, panBCD genes, dinG gene, ypmB gene, aspB gene, asnS gene, dnaD gene, nth gene and ypoC gene, complete cds's.] [NT:48.3% of identity to the Escherichia coli aspartate] [LE:14990] [RE:15373] [DI:direct] >gp:[GI:e1183686:g2634659] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:aspartate 1-decarboxylase] [GN:panD] [FN:pantothenate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.1.11] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [SP:P52999] [LE:156294] [RE:156677] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5314077_c1_1448 1276 5048 1593 530 1036 1.2e-104 Description sp:[LN:YIDK_ECOLI] [AC:P31448] [GN:YIDK] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 62.1 KD PROTEIN IN EMRD-GLVG INTERGENIC REGION] [SP:P31448] [DB:swissprot] >pir:[LN:H65169] [AC:H65169] [PN:hypothetical 62.1 kD protein in ilvo-ibpb intergenic region] [GN:yidK 3 [OR:Escherichia coli] [DB:pir2] >gp:[GI:g290528] [LN:ECOUW82] [AC:L10328] [GN:f571] [FN:unknown] [OR:Escherichia coli] [SR:Escherichia coli K12 strain MG1655; lambda clones EC14-52] [DB:genpept-bct1] [DE:E. coli; the region from 81.5 to 84.5 minutes.] [NT:similar to glucose transport proteins] [LE:47795] [RE:49510] [DI:complement] >gp:[GI:g1790113] [LN:AE000445] [AC:AE000445:U00096] [PN:putative cotransporter] [GN:yidK] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 335 of 400 of the complete genome.] [NT:f571; 100 pct identical to YIDK_ECOLI SW:] [LE:5576] [RE:7291] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_53413_f2_855 1277 5049 1602 533 424 8.7e-40 Description pir:[LN:H64532] [AC:H64532] [PN:2′,3′-cyclic-nucleotide 2′-phosphodiesterase, precursor] [GN:HP0104] [CL:2′,3′-cyclic-nucleotide 2′-phosphodiesterase:2′,3′-cyclic-nucleotide 2′-phosphodiesterase homology:phosphoesterase core homology] [OR:Helicobacter pylori] [EC:3.1.4.16] [DB:pir1] >gp:[GI:g2313187] [LN:AE000532] [AC:AE000532:AE000511] [PN:2′,3′-cyclic-nucleotide 2′-phosphodiesterase] [GN:HP0104] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 10 of 134 of the complete genome.] [NT:similar to GB:L42023 SP:P44764 PID:1004048] [LE:3594] [RE:5339] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5369212_c3_2196 1278 5050 1509 502 430 5.4e-40 Description sp:[LN:TAGE_BACSU] [AC:P13484] [GN:TAGE:RODD:GTAA] [OR:BACILLUS SUBTILIS] [EC:2.4.1.52] [DE:(EC 2.4.1.52) (TEICHOIC ACID BIOSYNTHESIS PROTEIN E)] [SP:P13484] [DB:swissprot] >pir:[LN:506048] [AC:506048:F69720] [PN:poly(glycerol-phosphate) alpha-glucosyltransferase, tagE:probable rodD protein UDP-glucose--polyglycerol phosphate glucosyltransferase tagE] [GN:tagE:rodD] [OR:Bacillus subtilis] [EC:2.4.1.52] [DB:pir2] [MP:310 degrees] >gp:[GI:g580920] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodD (gtaA) polypeptide (AA 1–673)] [SP:P13484] [LE:157] [RE:2178] [DI:direct] >gp:[GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] LEC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] >gp:[GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_54207_c1_1347 1279 5051 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_56693_c1_1418 1280 5052 792 263 778 2.7e-77 Description gp:[GI:g2058476] [LN:BTU71200] [AC:U71200] [PN:acetoin reductase] [OR:Bos taurus] [DB:genpept-mam] [DE:Bos taurus acetoin reductase mRNA, complete cds.] [NT:similar to acetoin reductase of Klebsiella] [LE:51] [RE:824] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_578162_f3_1226 1281 5053 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5867262_c1_1636 1282 5054 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5891075_f2_736 1283 5055 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5907177_f1_392 1284 5056 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5915653_f2_(‘3)789 1285 5057 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_595260_c2_1956 1286 5058 3780 1259 5568 0.0 Description gp:[GI:e1429593:g4756151] [LN:A67161] [AC:A67161] [FN:NARG GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 1 from Patent EP0805205.] [NT:unnamed protein product] [LE:4140] [RE:7814] [DI:direct] >gp:[GI:g3929522] [LN:AF029224] [AC:AF029224:AF029225] [PN:NarG] [GN:narG] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus nir and nar operons, complete sequences.] [NT:similar to Escherichia coli nitrate reductases NRA] [LE:6325] [RE:9999] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5963300_f2_895 1287 5059 504 167 116 5.6e-06 Description gp:[GI:d1044460:g5105361] [LN:AP000062] [AC:AP000062] [PN:213aa long hypothetical protein] [GN:APE1673] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 5/7.] [LE:71354] [RE:71995] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_5988786_f1_391 1288 5060 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6047827_c2_1778 1289 5061 705 234 569 3.8e-55 Description gp:[GI:g2565161] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:AldB] [GN:aldB] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:alpha-acetolactate decarboxylase] [LE:24488] [RE:25198] [DI:direct] >gp:[GI:g1699352] [LN:582499] [AC:582499] [PN:alpha-acetolactate decarboxylase] [GN:aldB] [OR:Lactococcus lactis] [SR:Lactococcus lactis NCDO2118 ssp. lactis] [DB:genpept-bct1] [DE:aldB = alpha-acetolactate decarboxylase [Lactococcus lactis, ssp. lactis, NCDO2118, Genomic, 840 nt] .] [NT:This sequence comes from FIG. 2; AldB] [LE:98] [RE:808] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6070938_c1_1477 1290 5062 1773 590 2475 4.0e-257 Description gp:[GI:g4574121] [LN:AF009415] [AC:AF009415] [PN:choline dehydrogenase] [GN:cudB] [OR:Staphylococcus xylosus] [DB:genpept-bct2] [DE:Staphylococcus xylosus choline transporter (cudT), putative regulatory protein (cudC) glycine betaine aldehyde dehydrogenase (cudA), and choline dehydrogenase (cudB) genes, complete cds.] [NT:CudB] [LE:4915] [RE:6597] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6101063_c2_1925 1291 5063 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6101542_f2_836 1292 5064 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6132893_c3_2259 1293 5065 462 153 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6136050_c2_1807 1294 5066 246 81 80 0.0033 Description gp:[GI:g4980536] [LN:AE001692] [AC:AE001692:AE000512] [PN:iron(II) transport protein A] [GN:TM0050] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 4 of 136 of the complete genome.] [NT:similar to SP:P33649 PID:414746 PID:606343] [LE:81] [RE:545] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6136527_c1_1463 1295 5067 615 204 618 2.4e-60 Description pir:[LN:C69877] [AC:C69877] [PN:adenylylsulfate kinase homolog ylnC] [GN:ylnC] [CL:adenylylsulfate kinase:adenylylsulfate kinase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e332186:g2462959] [LN:BSPYREYLO] [AC:AJ000974] [PN:putative adenosine 5-phosphosulfate kinase] [GN:ylnC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis pyrE to yloA gene region.] [LE:3535] [RE:4128] [DI:direct] >gp:[GI:e1185152:g2633933] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylnC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to adenylylsulfate kinase] [LE:34348] [RE:34941] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6251592_c2_1940 1296 5068 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6289068_c2_1750 1297 5069 219 72 233 1.0e-18 Description gp:[GI:g4574118] [LN:AF009415] [AC:AF009415] [PN:choline transporter] [GN:cudT] [OR:Staphylococcus xylosus] [DB:genpept-bct2] [DE:Staphylococcus xylosus choline transporter (cudT), putative regulatory protein (cudC), glycine betaine aldehyde dehydrogenase (cudA), and choline dehydrogenase (cudB) genes, complete cds.] [NT:CudT] [LE:811] [RE:2433] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6369688_f2_562 1298 5070 915 304 130 5.9e-06 Description gp:[GI:g4262225] [LN:ATAC00G200] [AC:AC006200] PN:putative phosphatidic acid phosphatase] [GN:F10A8.6] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln2] [DE:Arabidopsis thaliana chromosome II BAC F10A8 genomic sequence, complete sequence.] [LE:16778] [RE:17686] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_64442202_f3_1033 1299 5071 1050 349 310 1.0e-27 Description sp:[LN:YYAD_BACSU] [AC:P37520] [GN:YYAD] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 37.7 KD PROTEIN IN RPSF-SPO0J INTERGENIC REGION] [SP:P37520] [DB:swissprot] >pir:[LN:I40448] [AC:I40448:S66018:C70084:S18084] [PN:conserved hypothetical protein yyaD (replication origin region)] [GN:yyaD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005766:g467378] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:51420] [RE:52436] [DI:complement] >gp:[GI:g580907] [LN:BSORIGS] [AC:X62539] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genes rpmH, rnpA, 50kd, gidA and gidB.] [NT:unnamed protein product] [SP:P37520] [LE:10964] [RE:11980] [DI:direct] >gp:[GI:e1184820:g2636641] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yyaD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to hypothetical proteins from B. subtilis] [SP:P37520] [LE:203352] [RE:204368] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_651527_c1_1369 1300 5072 732 243 359 6.7e-33 Description sp:[LN:HIS4_SYNY3] [AC:P74561] [GN:HISA:SLR0652] [OR:SYNECHOCYSTIS SP] [SR:PCC 6803,] [EC:5.3.1.16] [DE:ISOMERASE.] [SP:P74561] [DB:swissprot] >pir:[LN:S76756] [AC:S76756] [PN:hypothetical protein] [CL:N-(5′-phospho-D-ribosylformimino)-5-amino-1- (5″-phosphoribosyl)-4-imidazolecarboxamide isomerase] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1019401:g1653757] [LN:D90916] [AC:D90916:AB001339] [PN:phosphorybosilformimino-5-amino-] [GN:hisA] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 26/27, 3270710–3418851.] [NT:ORF_ID:slr0652] [LE:48572] [RE:49342] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6522262_c2_1805 1301 5073 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6642792_f3_978 1302 5074 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6662875_f1_382 1303 5075 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6678507_f1_253 1304 5076 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6745327_f3_1336 1305 5077 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6772250_c1_1380 1306 5078 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6829635_c2_1695 1307 5079 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6829812_c1_1542 1308 5080 948 315 795 4.2e-79 Description gp:[GI:g4959404] [LN:AF115391] [AC:AF115391] PN:ribokinase RbsK] [GN:rbsK] [OR:Lactobacillus sakei] [DB:genpept-bct2] [DE:Lactobacillus sakei LaaA (laaA) gene, partial cds; LaaB (laaB), putative acetate kinase AckA (ackA), LaaC (laaC) genes, complete cds; rbs operon, complete sequence; and LaaE (laaE) gene, partial cds.] [LE:4450] [RE:5358] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6837938_f1_376 1309 5081 3561 1186 198 2.1e-14 Description sp:[LN:CDRl_HUMAN] [AC:P51861] [GN:CDR1] LOR:HOMO SAPIENS] [SR:,HUMAN] [DE:CEREBELLAR-DEGENERATION-RELATED ANTIGEN 1 (CDR34)] [SP:P51861] [DB:swissprot] >pir:[LN:A29770] [AC:A29770:A35640] [PN:cerebellar degeneration-related protein] [GN:CDR1:CDR] [OR:Homo sapiens] [SR:, man] [DB:pir2] [MP:Xq27.1–Xq27.2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6844012_c2_1748 1310 5082 1344 447 589 2.9e-57 Description sp:[LN:DCUA_ECOLI] [AC:P04539] [GN:DCUA:GENA] [OR:ESCHERICHIA COLI] [DE:ANAEROBIC C4-DICARBOXYLATE TRANSPORTER DCUA] [SP:P04539] [DB:swissprot] >pir:[LN:QQEC94] [AC:S56366:S57340:H65223:A04471:S08589] [PN:dicarboxylate membrane-transporter protein A:anaerobic c4-dicarboxylate transporter dcua:aspartase membrane transport protein genA] [GN:dcuA:genA] [CL:dicarboxylate membrane-transporter protein A] [OR:Escherichia coli] [DB:pir1] [MP:94 min] >gp:[GI:g510888] [LN:ECDUCA] [AC:X79887] [PN:dicarboxylate membrane-transporter protein] [GN:dcuB] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E. coli dcuA gene.] [SP:P04539] [LE:129] [RE:1430] [DI:direct] >gp:[GI:g5369821] [LN:ECOUW93] [AC:U14003] [GN:genA] [FN:membrane transport of aspartase] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [LE:56300] [RE:57601] [DI:complement] >gp:[GI:g1790580] [LN:AE000486] [AC:AE000486:U00096] [PN:anaerobic dicarboxylate transport] [GN:dcuA] [FN:transport; Transport of small molecules:] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 376 of 400 of the complete genome.] [NT:f433; 100 pct identical amino acid sequence and] [LE:6845] [RE:8146] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6897133_f1_415 1311 5083 126 41 75 0.038 Description gp:[GI:g53061681] [LN:AF160864] [AC:AF160864] [PN:orf256] [GN:orf256] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:Open reading frame ymf62 (CPGN)] [LE:40866] [RE:41636] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_6928_c1_1546 1312 5084 843 280 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7039051_c3_2238 1313 5085 750 249 585 7.6e-57 Description sp:[LN:YCKJ_BACSU] [AC:P42200] [GN:YCKJ] [OR:BACILLUS SUBTILIS] [DE:PROBABLE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN] [SP:P42200] [DB:swissprot] >pir:[LN:I40451] [AC:I40451:D69761:552382] [PN:glutamine ABC transporter (permease) homolog yckJ:ABC-type transport system probable membrane spanning protein] [GN:yckJ] [CL:histidine permease protein M] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g666982] [LN:BSPAAT] [AC:X77636] [PN:putative membrane spanning subunit] [GN:ORF2] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis putative amino acid transporter gene.] [NT:potential ABC-transport system] [SP:P42200] [LE:909] [RE:16131 EDI:direct] >gp:[GI:e1182312:g2632646] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yckJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21):from 194651 to 415810.] [NT:similar to glutamine ABC transporter (permease)] [SP:P42200] [LE:214896] [RE:215600] [DI:complement] >gp:[GI:e1182327:g2632661] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:yckJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:similar to glutamine ABC transporter (permease)] [SP:P42200] [LE:6796] [RE:7500] [DI:complement] >gp:[GI:d1009628:g1805431] [LN:D50453] [AC:D50453] [PN:homologue of glutamine transport system] [GN:yckJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing the amyE-srfA region, complete cds.] [LE:89199] [RE:89903] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7227175_c3_2052 1314 5086 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7228517_c3_2197 1315 5087 411 136 191 4.3e-15 Description pir:[LN:A70556] [AC:A70556] [PN:probable mutator MutT protein or homolog] [GN:mutT2] [CL:mutT domain homology] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e317133:g2117198] [LN:MTCI65] [AC:Z95584:AL123456] [PN:mutT2] [GN:mutT2] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment.50/162.] [NT:Rv1160, (MTCI65.27), mutT, len:141. Probable] [LE:24794] [RE:25219] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7234627_c1_1580 1316 5088 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7242128_c2_1926 1317 5089 345 114 352 3.7e-32 Description gp:[GI:e314909:g2073521] [LN:SSK1MECA] [AC:Y09223] [PN:hypothetical protein] [OR:Staphylococcus sciuri] [DB:genpept-bct1] [DE:S. sciuri mecA gene & ORF's 450, 145 & 179.] [NT:ORF450] [LE:<1] [RE:1351] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7243832_c2_1644 1318 5090 1722 573 684 2.4e-67 Description gp:[GI:d1044599:g5105500] [LN:AP000062] [AC:AP000062] [PN:558aa long hypothetical protein] [GN:APE1810] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 5/7.] [NT:motif = ATP/GTP-binding site motif A (P-loop)] [LE:155809] [RE:157485] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7245377_c1_1534 1319 5091 1002 333 258 3.4e-22 Description sp:[LN:EST_ACICA] [AC:P18773] [GN:EST] [OR:ACINETOBACTER CALCOACETICUS] [EC:3.1.1.-] [DE:ESTERASE,] [SP:P18773] [DB:swissprot] >gp:[GI:g303953] [LN:ACCESTERAS] [AC:M24890:L20754] [PN:esterase] [OR:Acinetobacter calcoaceticus] [SR:Acinetobacter calcoaceticus ssp. iwoffii (strain RAG-1) DNA] [DB:genpept-bct1] [DE:Acinetobacter calcoaceticus esterase gene, complete cds.] [LE:1] [RE:912] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_7301078_c3_2006 1320 5092 465 154 340 7.0e-31 Description gp:[GI:g3114664] [LN:AF061267] [AC:AF061267] [PN:ATPase component HtxD] [GN:htxD] [OR:Pseudomonas stutzeri] [DB:genpept-bct2] [DE:Pseudomonas stutzeri putative alpha-ketoglutarate-dependent hypophosphite dioxygenase (htxA), binding protein component HtxB (htxB), inner membrane component HtxC (htxC), ATPase component HtxD (htxD), inner membrane component HtxE (htxE), putative C-P lyasesubunits HtxF (htxF), HtxG (htxG), and HtxH (htxH) genes, complete cds; and putative C-P lyase subunit HtxI (htxI) gene, partial cds.] [NT:putative binding-protein-dependent hypophosphite] [LE:39961] [RE:5021] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_783375_f2_893 1321 5093 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_784387_c3_1970 1322 5094 1425 474 781 1.3e-77 Description pir:[LN:G71641] [AC:G71641] [PN:dihydrolipoamide dehydrogenase (pdhD) RP805] [GN:pdhD:RP805] [CL:dihydrolipoamide dehydrogenase:dihydrolipoamide dehydrogenase homology] [OR:Rickettsia prowazekii] [DB:pir2] >gp:[GI:e1343076:g3861332] [LN:RPXX04] [AC:AJ235273:AJ235269] [PN:DIHYDROLIPOAMIDE:DEHYDROGENASE (pdhD)] [GN:RP805] [OR:Rickettsia prowazekii] [DB:genpept-bct1] [DE:Rickettsia prowazekii strain Madrid E, complete genome; segment 4/4.] [LE:137655] [RE:139034] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_787677_f2_636 1323 5095 483 160 246 6.4e-21 Description gp:[GI:g2735506] [LN:SCU96107] [AC:U96107] [PN:SceB precursor] [GN:sceB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus N5,N10-methylenetetrahydromethanopterinreductase homolog, SceB precursor (sceB) and putative transmembrane protein genes, complete cds, and putative Na+/H+ antiporter NhaC (nhaC) gene, partial cds.] [NT:major secreted protein] [LE:1894] [RE:2685] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_798838_c3_1987 1324 5096 1260 419 845 2.1e-84 Description pir:[LN:E70368] [AC:E70368] [PN:histidinol dehydrogenase] [GN:hisD] [CL:histidinol dehydrogenase:histidinol dehydrogenase homology] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983343] [LN:AE000707] [AC:AE000707:AE000657] [PN:histidinol dehydrogenase] [GN:hisD] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 39 of 109 of the complete genome.] [LE:5716] [RE:6996] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_823518_f1_169 1325 5097 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_832561_c3_2102 1326 5098 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_86088_f2_835 1327 5099 369 122 154 3.6e-11 Description gp:[GI:g2735504] [LN:SCU96107] [AC:U96107] [ER:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus N5,N10-methylenetetrahydromethanopterinreductase homolog, SceB precursor (sceB) and putative transmembrane protein genes, complete cds, and putative Na+/H+ antiporter NhaC (nhaC) gene, partial cds.] [NT:Orf1] [LE:<1] [RE:185] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_860917_f3_1170 1328 5100 201 66 56 0.0095 Description pir:[LN:A71605] [AC:A71605] [PN:probable integral membrane protein PFB0845w] [GN:PFB0845w] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845291] [LN:AE001420] [AC:AE001420:AE001362] [PN:predicted integral membrane protein] [GN:PFB0845w] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 57 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:9688] [RE:10611] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_867255_f1_235 1329 5101 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_882143_c2_1927 1330 5102 255 84 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_891000_c2_1906 1331 5103 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_895253_c3_2019 1332 5104 510 169 303 5.8e-27 Description pir:[LN:E71960] [AC:E71960] PN:probable peptide methionine sulfoxide reductase] [GN:jhp0210] [OR:Helicobacter pylori] [SR:strain J99, , strain J99] [SR:strain J99,] [DB:pir2] >gp:[GI:g4154731] [LN:AE001459] [AC:AE001459:AE001439] [PN:putative PEPTIDE:METHIONINE SULFOXIDE:REDUCTASE] [GN:jhp0210] [OR:Helicobacter pylori J99] [DB:genpept-bct2] [DE:Helicobacter pylori, strain J99 section 20 of 132 of the complete genome.] [NT:similar to H. pylori 26695 gene HP0224] [LE:4882] [RE:5961] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_901377_c2_1785 1333 5105 327 108 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_901377_f2_596 1334 5106 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_953142_f1_219 1335 5107 954 317 228 5.1e-19 Description sp:[LN:YOBS_MYCTU] [AC:Q50648] [GN:MTCY227.28C] [OR:MYCOBACTERIUM TUBERCULOSIS] [DE:HYPOTHETICAL 26.2 KD PROTEIN CY227.28C] [SP:Q50648] [DB:swissprot] >pir:[LN:D70724] [AC:D70724] [PN:hypothetical protein Rv2573] [GN:Rv2573] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e256179:g1478239] [LN:MTCY227] [AC:Z77724:AL123456] [PN:hypothetical protein Rv2573] [GN:Rv2573] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 114/162.] [NT:Rv2573, (MTCY227.28c), len:246. Unknown but some] [SP:Q50648] [LE:5598] [RE:6338] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_953930_f2_838 1336 5108 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_961562_c1_1401 1337 5109 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_968800_c2_1796 1338 5110 804 267 1031 4.2e-104 Description gp:[GI:e244971:g1340128] [LN:SA1234] [AC:X97985] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus orfs 1, 2, 3 & 4.1] [NT:ORF1] [LE:537] [RE:1304] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_9766375_f1_90 1339 5111 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_9770801_f2_621 1340 5112 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_978965_c3_2055 1341 5113 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_986312_f2_447 1342 5114 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_9875333_c1_1552 1343 5115 1533 510 1134 5.1e-115 Description sp:[LN:DHAL_VIBCH] [AC:P23240] IGN:ALDA] [OR:VIBRIO CHOLERAE] [EC:1.2.1.3] [DE:ALDEHYDE:DEHYDROGENASE,] [SP:P23240] [DB:swissprot] >gp:[GI:g155276] [LN:VIBTAGALDA] [AC:M60658] [PN:aldehyde dehydrogenase] [GN:aldA] [OR:Vibrio cholerae] [SR: V. cholerae DNA] [DB:genpept-bct1] [EC:l.2.1.3] [DE:Vibrio cholerae aldehyde dehydrogenase gene, complete cds, and tagA gene, 5′ end.] [LE:419] [RE:1939] [DI:direct] >gp:[GI:g3004925] [LN:AF034434] [AC:AF034434] [PN:aldehyde dehydrogenase] [GN:aldA] [OR:Vibrio cholerae] [DB:genpept-bct2] [DE:Vibrio cholerae pathogenicity island, putative transposase, aldehyde dehydrogenase (aldA), toxR-activated gene A protein (tagA), putative inner membrane protein, and putative zincmetalloprotease genes, complete cds; and toxR-activated gene Dprotein (tagD) gene, partial cds.] [NT:AldA] [LE:2388] [RE:3908] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_9928200_f1_189 1344 5116 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_9944635_f2_631 1345 5117 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_995300_f1_28 1346 5118 204 67 70 0.048 Description gp:[GI:g1173895] [LN:PFU41075] [AC:U41075] [PN:p82] rGN:RAP-1] [OR:Plasmodium falciparum] [SR:malaria parasite strain = IndJ-1 (clone 1 of Indian isolate J)] [DB:genpept-inv2] [DE:Plasmodium falciparum strain IndJ-1 rhoptry-associated protein 1 (RAP-1) gene, partial cds.] [NT:rhoptry-associated protein 1; localized to rhoptry] [LE:<1] [RE:>461] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_9954012_f1_333 1347 5119 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10317307_f2_121 1348 5120 267 88 81 0.016 Description sp:[LN:TAGB_BACSU] [AC:P27621] [GN:TAGB] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID BIOSYNTHESIS PROTEIN B PRECURSOR] [SP:P27621] [DB:swissprot] >pir:[LN:C49757] [AC:C49757:C69720] [PN:polyglycerol phosphate techoic acid biosynthesis protein tagB] [GN:tagB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143725] [LN:BACTAGABCD] [AC:M57497] [GN:tagB] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) DNA] [DB:genpept-bct1] [DE:B. subtilis tagA, tagB, tagC and tagD genes, complete cds.] [NT:putative] [LE:1603] [RE:2748] [DI:direct] >gp:[GI:e1184482:g2636102] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:tagB] [FN:polyglycerol phosphate assembly and export] OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P27621] [LE:84143] [RE:85288] [DI:direct] >gp:[GI:e1184482:g2636102] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:tagB] [FN:polyglycerol phosphate assembly and export] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P27621] [LE:84143] [RE:85288] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10626525_f1_58 1349 5121 1023 340 810 1.1e-80 Description pir:[LN:E69831] [AC:EG9831] [PN:conserved hypothetical protein yhfP] [GN:yhfP] [CL:Bacillus subtilis conserved hypothetical protein yhfP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183034:g2633368] [LN:BSUB0006] [AC:Z99109:AL00912G] [GN:yhfP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:106496] [RE:107488] [DI:direct] >gp:[GI:e324995:g2226252] [LN:BSY14084] [AC:Y14084] [PN:hypothetical protein] [GN:yhfP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA, region 78–80 degrees:aprE to comK.] [NT:high similarity to yhdH from E. coli (Swiss Prot] [LE:924] [RE:1916] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_10976625_c1_226 1350 5122 888 295 870 4.8e-87 Description sp:[LN:YHXD_BACSU] [AC:P40398:007554] [GN:YHXD] [OR:BACILLUS SUBTILIS] [EC:1.-.-.-] [DE:(EC 1.-.-.-) (ORFY)] [SP:P40398:O07554] [DB:swissprot] >pir:[LN:E69835] [AC:E69835:S43612] [PN:ribitol dehydrogenase homolog yhxD] [GN:yhxD] [CL:short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183045:g2633379] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhxD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to ribitol dehydrogenase] [SP:P40398] [LE:117706] [RE:118605] [DI:complement] >gp:[GI:e324973:g2226172] [LN:BSY14081] [AC:Y14081] [PN:hypothetical protein] [GN:yhxD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 92 degrees:region between comK and addAB.] [NT:bp 1–501 overlaps with bp 1525–1947 (end):from EMBL] [SP:P40398] [LE:1] [RE:900] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11114677_f2_73 1351 5123 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_11740778_f2_80 1352 5124 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1207250_c3_313 1353 5125 480 159 89 0.032 Description sp:[LN:ATP6_APIME] [AC:Q00275] [GN:ATP6] [OR:APIS MELLIFERA] [SR:,HONEYBEE] [EC:3.6.1.34] [DE:ATP SYNTHASE A CHAIN, (PROTEIN 6)] [SP:Q00275] [DB:swissprot] >pir:[LN:A42622] [AC:A42622:S52964] [PN:H+-transporting ATP synthase, chain 61] [CL:H+-transporting ATP synthase protein 6] [OR:mitochondrion Apis mellifera] [SR:, honeybee] [EC:3.6.1.34] [DB:pir2] >gp:[GI:g552442] [LN:AMFGENOM] [AC:L06178] [PN:ATPase subunit 6] [OR:Mitochondrion Apis mellifera ligustica] [SR:common honeybee] [DB:genpept-inv1] [DE:Apis mellifera ligustica complete mitochondrial genome.] [LE:4584] [RE:5264] [DI:direct] >gp:[GI:g552451] [LN:AMFMTATPAS] [AC:M87065] [PN:adenosine triphosphatase 6] [GN:ATPase6] [OR:Mitochondrion Apis mellifera ligustica] [SR:Mitochondrion Apis mellifera ligustica (organelle Mitochondrio] [DB:genpept-inv1] [DE:Apis mellifera mitochondrial adenosine triphosphatase 8 (ATPase8) gene, complete cds; adenosine triphosphatase 6 (ATPase6) gene, complete cds.] [LE:141] [RE:821] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_1290703_c1_227 1354 5126 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14644018_f1_39 1355 5127 969 322 324 3.4e-29 Description gp:[GI:g2196513] [LN:SEU77778] [AC:U77778:U29130] [PN:putative membrane protein] [GN:epiH] [FN:involved in epidermin secretion] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis plasmid pTue32 putative ABC transporter subunits (epiG), (epiE), and (epiF), putative membrane protein(epiH), EpiT′ (epiT′) and EpiT″ (epiT″) genes, complete cds.] [NT:EpiH] [LE:2615] [RE:3607] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000985_14647750_c2_238 1356 5128 141 46 Description NO-HIT

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_14656952_f2_93 1357 5129 633 210 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_15035952_f2_91 1358 5130 477 158 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_15117317_c2_243 1359 5131 2184 727 953 2.4e−102 Description sp:[LN:TAGF_BACSU] [AC:P13485] [GN:TAGF:RODC:TAG3] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID BIOSYNTHESIS PROTEIN F] [SP:P13485] [DB:swissprot] >pir:[LN:S06049] [AC:S06049:G69720] [PN:probable CDPglycerol glycerophosphotransferase, :CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase tagF:rodC protein:teichoic-acid synthase] [GN:rodC:tag-3:tagF ] [OR:Bacillus subtilis] [EC:2.7.8.12] [DB:pir2] [MP:310 degrees] >gp:[GI:g40100] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodC (tag3) polypeptide (AA 1–746)] [SP:P13485] [LE:2178] [RE:4418] [DI:direct] >gp:[GI:e1184478:g2636098] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:CDP-glycerol:polyglycerol phosphate] [GN:tagF] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodC] [SP:P13485] [LE:78129] [RE:80369] [DI:complement] >gp:[GI:e1184478:g2636098] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:CDP-glycerol:polyglycerol phosphate] [GN:tagF] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodC] [SP:P13485] [LE:78129] [RE:80369] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_15136562_c2_253 1360 5132 1500 499 1636 3.2e−168 Description gp:[GI:d1039113:g4514332] [LN:AB013369] [AC:AB013369] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 yesT and comEC genes, partial andcomplete cds.] [NT:unknown] [LE:4328] [RE:5830] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_15829135_c2_237 1361 5133 204 67 105 1.0e−05 Description pir:[LN:E69764] [AC:E69764] [PN:hypothetical protein ycnI] [GN:ycnI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182361:g2632695] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycnI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [LE:43004] [RE:43618] [DI:complement] >gp:[GI:d1009660:g1805463] [LN:D50453] [AC:D50453] [GN:ycnI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:125407] [RE:126021] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_159377_c3_317 1362 5134 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_17047575_f3_150 1363 5135 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_174218_c1_209 1364 5136 1989 662 1225 1.1e−124 Description sp:[LN:YHCA_BACSU] [AC:P54585] [GN:YHCA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 58.3 KD PROTEIN IN GLPD-CSPB INTERGENIC REGION] [SP:P54585] [DB:swissprot] >pir:[LN:E69821] [AC:E69821] [PN:multidrug resistance protein homolog yhcA] [GN:yhcA] [CL:lincomycin-resistance protein lmrB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182890:g2633224] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:similar to multidrug resistance protein] [SP:P54585] [LE:174464] [RE:176062] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_179653_c3_325 1365 5137 666 221 100 0.015 Description sp:[LN:TCR2_BACSU] [AC:P14512] [GN:TET] [OR:BACILLUS SUBTILIS] [DE:TETRACYCLINE RESISTANCE PROTEIN] [SP:P14512] [DB:swissprot] >pir:[LN:S42238] [AC:S42238] [PN:tetracyclin resistance protein] [GN:tet] [CL:tetracycline resistance protein] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g476735] [LN:PNS1CG] [AC:M16217] [GN:tet] [OR:Plasmid pNS1] [SR:Plasmid pNS1 from Staphylococcus aureus, plasmid pTP5 DNA] [DB:genpept-bct1] [DE:Plasmid pNS1 (from Staphylococcus aureus) encodingtetracycline-resistance (tet), complete genome.] [LE:305] [RE:1684] [DI:direct] >gp:[GI:g456770] [LN:S67449] [AC:S67449] [PN:Tet(K)] [GN:tet(K)] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus pT181] [DB:genpept-bct1] [DE:tet(K)=tetracycline efflux protein [Staphylococcus aureus, pT181,Plasmid, 1380 nt].] [NT:tetracycline efflux protein; This sequence comes] [LE:1] [RE:1380] [DI:direct] >gp:[GI:g1052998] [LN:SAU38428] [AC:U38428] [PN:tetracycline resistance protein] [GN:tet] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus plasmid pKH6] [DB:genpept-bct1] [DE:Staphylococcus aureus tetracycline resistance plasmid pKH6,complete sequence.] [LE:321] [RE:1700] [DI:direct] >gp:[GI:g1053140] [LN:SAU38656] [AC:U38656] [PN:tetracycline resistance protein] [GN:tet] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus plasmid pKH1] [DB:genpept-bct1] [DE:Staphylococcus aureus tetracycline resistance plasmid pKH1, tetgene, complete cds.] [LE:436] [RE:1815] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_19548755_f3_132 1366 5138 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_1970178_f3_146 1367 5139 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_19742962_c1_221 1368 5140 1026 341 423 1.1e−39 Description gp:[GI:e1486019:g4995689] [LN:LLA011653] [AC:AJ011653] [PN:aldose 1-epimerase] [GN:galM] [FN:mutarotase] [OR:Lactococcus lactis] [DB:genpept-bct1] [EC:5.1.3.3] [DE:Lactococcus lactis (strain MG1363) galactose operon (galAMKTEgenes).] [LE:1990] [RE:3009] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_19960885_c1_228 1369 5141 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_20579752_c3_319 1370 5142 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_20580443_c3_310 1371 5143 333 110 173 3.5e−13 Description gp:[GI:g3582220] [LN:AE001272] [AC:AE001272] [PN:conserved hypothetical protein] [GN:ORF00047] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmidsequence.] [NT:similar to GB:X69895 SP:P39044 PID:40067 percent] [LE:44384] [RE:44728] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_20718790_f3_138 1372 5144 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_20789507_c2_280 1373 5145 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_20897125_c1_212 1374 5146 975 324 504 2.9e−48 Description pir:[LN:H69806] [AC:H69806] [PN:divalent cation transport protein homolog yfjQ] [GN:yfjQ] [CL:magnesium and cobalt transport protein] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1182790:g2633124] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfjQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:similar to divalent cation transport protein] [LE:68033] [RE:68992] [DI:complement] >gp:[GI:d1025214:g2780401] [LN:D78509] [AC:D78509] [PN:YfjQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis YfjG-YfjR genes, complete cds.] [LE:17333] [RE:18292] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_21676937_c1_190 1375 5147 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_22074200_f3_184 1376 5148 126 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_22277215_f3_142 1377 5149 1164 387 109 1.5e−05 Description pir:[LN:C44863] [AC:C44863] [PN:R45 antigen] [OR:Plasmodium falciparum] [DB:pir3] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_22455213_f3_169 1378 5150 687 228 411 2.1e−38 Description gp:[GI:g4982229] [LN:AE001807] [AC:AE001807:AE000512] [PN:response regulator DrrA] [GN:TM1655] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 119 of 136 of the complete genome.] [NT:similar to PID:1575577 GB:AE000512 percent] [LE:12477] [RE:13220] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_22867942_c1_224 1379 5151 711 236 417 4.8e−39 Description gp:[GI:g4262236] [LN:ATAC006200] [AC:AC006200] [PN:putative ribose 5-phosphate isomerase] [GN:F10A8.17] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln2] [DE:Arabidopsis thaliana chromosome II BAC F10A8 genomic sequence,complete sequence.] [LE:58788] [RE:59585] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_22869687_c1_186 1380 5152 438 145 143 5.2e−10 Description pir:[LN:A64946] [AC:A64946] [PN:hypothetical protein b1841] [CL:copper resistance protein pcoC] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1788146] [LN:AE000278] [AC:AE000278:U00096] [PN:orf, hypothetical protein] [GN:b1841] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 168 of 400 of the completegenome.] [NT:f124; This 124 aa ORF is 39 pct identical (6 gaps)] [LE:4445] [RE:4819] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23556552_c2_240 1381 5153 405 134 123 6.9e−08 Description sp:[LN:YCX1_PORPU] [AC:P51192] [OR:PORPHYRA PURPUREA] [DE:HYPOTHETICAL 20.1 KD PROTEIN IN YCF37-PSAF INTERGENIC REGION (ORF174)] [SP:P51192] [DB:swissprot] >pir:[LN:S73113] [AC:S73113] [PN:hypothetical protein 174] [OR:chloroplast Porphyra purpurea] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23601557_f1_10 1382 5154 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23601577_f3_144 1383 5155 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23611437_c1_188 1384 5156 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23839193_c1_193 1385 5157 1614 537 1324 3.7e−135 Description pir:[LN:F69649] [AC:F69649] [PN:L-lactate permease lctP] [GN:lctP] [CL:L-lactate permease] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182258:g2632592] [LN:BSUB0002] [AC:Z99105:AL009l26] [PN:L-lactate permease] [GN:lctP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:alternate gene name: ycgC] [LE:135677] [RE:137302] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23876887_f1_60 1386 5158 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23923412_f1_31 1387 5159 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_23929627_f3_160 1388 5160 177 58 46 0.046 Description pir:[LN:I40601] [AC:I40601:S70950] [PN:mobilization protein] [GN:mobA] [OR:Bacteroides vulgatus] [DB:pir2] >gp:[GI:g1079659] [LN:BVU38243] [AC:U38243:M72418] [PN:mobilization protein] [GN:mobA] [FN:conjugal transfer of Tn4555] [OR:Bacteroides vulgatus] [DB:genpept-bct1] [DE:Bacteroides vulgatus beta-lactamase (cfxA) gene, complete cds andmobilization protein (mobA) gene, complete cds.] [LE:1208] [RE:2611] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24250317_c1_203 1389 5161 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24267567_f3_163 1390 5162 645 214 99 0.0046 Description pir:[LN:C70649] [AC:C70649] [PN:hypothetical protein Rv3058c] [GN:Rv3058c] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e290931:g1781155] [LN:MTCY22D7] [AC:Z83866:AL123456] [PN:hypothetical protein Rv3058c] [GN:Rv3058c] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 133/162.] [NT:Rv3058c, (MTCY22D7.23), len: 216. Function:] [LE:4546] [RE:5196] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24394175_f3_151 1391 5163 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24407827_c2_266 1392 5164 561 186 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24412826_c3_323 1393 5165 963 320 286 3.7e−25 Description sp:[LN:HUTG_KLEAE] [AC:P19452] [GN:HUTG] [OR:KLEBSIELLA AEROGENES] [EC:3.5.3.8] [DE:(HISTIDINE UTILIZATION PROTEIN G) (FRAGMENT)] [SP:P19452] [DB:swissprot] >gp:[GI:g149204] [LN:KPNHUTC] [AC:M34604] [OR:Klebsiella aerogenes] [SR:Klebsiella aerogenes (strain W70) DNA] [DB:genpept-bct1] [DE:K.aerogenes histidine utilization repressor C (hutC) gene, completecds.] [NT:histidine utilization repressor G] [LE:<1] [RE:669] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24415925_c1_211 1394 5166 903 300 282 9.7e−25 Description gp:[GI:g1209223] [LN:ACCEST] [AC:L38252] [PN:esterase] [GN:est] [OR:Acinetobacter lwoffii] [DB:genpept-bct1] [DE:Acinetobacter lwoffii orf1 and esterase (est) genes, complete cds.] [LE:638] [RE:1549] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24662825_c2_279 1395 5167 618 205 538 7.3e−52 Description pir:[LN:H70068] [AC:H70068] [PN:hypothetical protein ywrF] [GN:ywrF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184514:g2636133] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywrF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:119966] [RE:120583] [DI:direct] >gp:[GI:e311284:g1929333] [LN:BSZ93767] [AC:Z93767] [GN:ywrF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis DNA; 15.2 kb fragment, from ywqN gene to ywrO gene.] [LE:4588] [RE:5205] [DI:complement] >gp:[GI:e1184514:g2636133] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywrF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:119966] [RE:120583] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_2470010_c1_191 1396 5168 723 240 157 1.3e−08 Description gp:[GI:e1407791:g4493935] [LN:PFMAL3P5] [AC:AL034556] [GN:MAL3P5.8] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P5, complete sequence.] [NT:predicted using hexExon; MAL3P5.8 (PFC0610c),] [LE:29992] [RE:33537] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_24803386_c1_201 1397 5169 1080 359 215 1.4e−15 Description pir:[LN:G70728] [AC:G70728] [PN:hypothetical protein Rv2563] [GN:Rv2563] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e1299946:g3261618] [LN:MTCY9C4] [AC:Z77250:AL123456] [PN:hypothetical protein Rv2563] [GN:Rv2563] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 113/162.] [NT:Rv2563, (MTCY9C4.05c), len: 349. Unknown membrane] [LE:5757] [RE:6806] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_2540907_c3_304 1398 5170 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_25527188_c1_225 1399 5171 1137 378 830 8.3e−83 Description pir:[LN:E69640] [AC:E69640] [PN:hippurate hydrolase hipO] [GN:hipO] [CL:hippurate hydrolase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184178:g2635394] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:hippurate hydrolase] [GN:hipO] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.5.1.32] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131to 3013540.] [LE:203660] [RE:204910] [DI:complement] >gp:[GI:e1185802:g2635413] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:hippurate hydrolase] [GN:hipO] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.5.1.32] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771to 3213410.] [LE:1020] [RE:2270] [DI:complement] >gp:[GI:g2293256] [LN:AF008220] [AC:AF008220] [PN:putative hippurate hydrolase] [GN:hipO] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:178157] [RE:179407] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_25551640_c1_214 1400 5172 861 286 112 0.0023 Description gp:[GI:e1331922:g3758855] [LN:PFMAL3P6] [AC:Z98551] [GN:MAL3P6.11] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P6, complete sequence.] [NT:predicted using hexExon; MAL3P6.11 (PFC0760c),] [LE:53772] [RE:63956] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_25579390_f1_50 1401 5173 1194 397 402 8.5e−37 Description gp:[GI:e1294490:g3169038] [LN:SC1C3] [AC:AL023702] [PN:putative transferase] [GN:SC1C3.12] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 1C3.] [NT:SC1C3.12, possible transferase, len: 697 aa; weakly] [LE:13186] [RE:15279] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_25910952_c3_309 1402 5174 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_26753588_f1_44 1403 5175 1383 460 344 2.6e−31 Description pir:[LN:H69762] [AC:H69762] [PN:two-component sensor histidine kinase homolog yclK] [GN:yclK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182343:g2632677] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:yclK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [NT:similar to two-component sensor histidine kinase] [LE:24077] [RE:25498] [DI:direct] >gp:[GI:d1009643:g1805446] [LN:D50453] [AC:D50453] [PN:homologue of alkaline phosphatase synthesis] [GN:yclK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:106480] [RE:107901] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_272550_c2_268 1404 5176 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_292883_c2_229 1405 5177 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_29565627_c3_286 1406 5178 879 292 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_30476575_c1_216 1407 5179 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_30703458_c2_230 1408 5180 906 301 1241 2.3e−126 Description sp:[LN:PTSB_STAXY] [AC:P51184] [GN:SCRA] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:2.7.1.69] [DE:(EC 2.7.1.69) (EII-SCR)] [SP:P51184] [DB:swissprot] >pir:[LN:S39978] [AC:S39978] [PN:scrA protein] [CL:phosphotransferase system sucrose-specific enzyme II, factor II] [OR:Staphylococcus xylosus] [DB:pir2] >gp:[GI:g407908] [LN:SXSCRA] [AC:X69800] [PN:EIIscr] [GN:scrA] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S.xylosus scrA gene and unidentified open reading frames.] [NT:ORF2] [SP:P51184] [LE:1053] [RE:2495] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_34032561_c3_316 1409 5181 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_34199202_c1_189 1410 5182 540 179 343 3.3e−31 Description gp:[GI:e1184294:g2635712] [LN:BSUB0017] [AC:Z99120:AL009126] [PN:transcriptional regulator] [GN:paiA] [FN:negative regulation of sporulation, septation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001to 3414420.] [LE:106800] [RE:107318] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_34610667_c3_297 1411 5183 690 229 465 3.9e−44 Description pir:[LN:B69377] [AC:B69377] [PN:ABC transporter, ATP-binding protein homolog] [CL:unassigned ATP-binding cassette proteins: ATP-binding cassette homology] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649576] [LN:AE001033] [AC:AE001033:AE000782] [PN:ABC transporter, ATP-binding protein] [GN:AF1018] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 74 of 172 of the complete genome.] [NT:similar to GB:L77117 SP:Q58206 PID:1591493 percent] [LE:2126] [RE:2812] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_35955213_c3_302 1412 5184 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_36140963_f2_120 1413 5185 1431 476 226 1.9e−15 Description sp:[LN:TAGF_BACSU] [AC:P13485] [GN:TAGF:RODC:TAG3] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID BIOSYNTHESIS PROTEIN F] [SP:P13485] [DB:swissprot] >pir:[LN:S06049] [AC:S06049:G69720] [PN:probable CDPglycerol glycerophosphotransferase, :CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase tagF:rodC protein:teichoic-acid synthase] [GN:rodC:tag-3:tagF] [OR:Bacillus subtilis] [EC:2.7.8.12] [DB:pir2] [MP:310 degrees] >gp:[GI:g40100] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodC (tag3) polypeptide (AA 1–746)] [SP:P13485] [LE:2178] [RE:4418] [DI:direct] >gp:[GI:e1184478:g2636098] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:CDP-glycerol:polyglycerol phosphate] [GN:tagF] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodC] [SP:P13485] [LE:78129] [RE:80369] [DI:complement] >gp:[GI:e1184478:g2636098] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:CDP-glycerol:polyglycerol phosphate] [GN:tagF] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodC] [SP:P13485] [LE:78129] [RE:80369] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_3906385_f3_183 1414 5186 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_3957511_c2_248 1415 5187 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4062562_c2_269 1416 5188 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4178140_c2_270 1417 5189 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4297627_f2_119 1418 5190 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4382062_f1_19 1419 5191 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4496062_c3_287 1420 5192 345 114 168 1.2e−12 Description pir:[LN:E69764] [AC:E69764] [PN:hypothetical protein ycnI] [GN:ycnI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182361:g2632695] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycnI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [LE:43004] [RE:43618] [DI:complement] >gp:[GI:d1009660:g1805463] [LN:D50453] [AC:D50453] [GN:ycnI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:125407] [RE:126021] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4687893_c1_213 1421 5193 1059 352 523 2.8e−50 Description gp:[GI:g2822338] [LN:AF016485] [AC:AF016485] [OR:Halobacterium sp. NRC-1] [DB:genpept-bct2] [DE:Halobacterium sp. NRC-1 plasmid pNRC100, complete plasmid sequence.] [NT:ORF H0660; similar to ORF in Sulfolobus] [LE:60258] [RE:61397] [DI:complement] >gp:[GI:g2822427] [LN:AF016485] [AC:AF016485] [OR:Halobacterium sp. NRC-1] [DB:genpept-bct2] [DE:Halobacterium sp. NRC-1 plasmid pNRC100, complete plasmid sequence.] [NT:ORF H1696; similar to Sulolobus solfataricus] [LE:161992] [RE:163131] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4689007_f1_49 1422 5194 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4727217_f1_25 1423 5195 402 133 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4797125_f3_148 1424 5196 1647 548 970 1.2e−97 Description sp:[LN:ARAB_BACSU] [AC:P94524] [GN:ARAB] [OR:BACILLUS SUBTILIS] [EC:2.7.1.16] [DE:L-RIBULOKINASE,] [SP:P94524] [DB:swissprot] >pir:[LN:D69587] [AC:D69587] [PN:L-ribulokinase araB] [GN:araB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184128:g2635344] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:L-ribulokinase] [GN:araB] [FN:L-arabinose utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.16] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131to 3013540.] [SP:P94524] [LE:149661] [RE:151343] [DI:complement] >gp:[GI:e1165307:g1770015] [LN:BSZ75208] [AC:Z75208] [PN:L-ribulokinase] [GN:araB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic sequence 89009bp.] [NT:homology to araB of Escherichia coli;identified on] [SP:P94524] [LE:18564] [RE:20246] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_4881588_c2_258 1425 5197 465 154 134 4.7e−09 Description pir:[LN:A69783] [AC:A69783] [PN:transcription regulator MarR family homolog ydgG] [GN:ydgG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020150:g1881370] [LN:AB001488] [AC:AB001488] [GN:ydgG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:142152] [RE:142610] [DI:direct] >gp:[GI:e1182530:g2632864] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydgG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [NT:similar to transcriptional regulator (MarR family)] [LE:205898] [RE:206356] [DI:direct] >gp:[GI:e1182543:g26328771] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to813890.] [NT:similar to transcriptional regulator (MarR family)] [LE:7948] [RE:8406] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_5111253_f1_6 1426 5198 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_5128587_f1_12 1427 5199 696 231 336 1.8e−30 Description pir:[LN:A69811] [AC:A69811] [PN:conserved hypothetical protein yf1K] [GN:yf1K] [CL:hypothetical protein HI0278] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182755:g2633089] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yf1K] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:similar to hypothetical proteins] [LE:34765] [RE:35430] [DI:direct] >gp:[GI:d1023167:g2443233] [LN:D86417] [AC:D86417] [PN:Yf1K] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region,complete cds.] [LE:13092] [RE:13757] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_5283390_c2_259 1428 5200 1416 471 465 3.9e−44 Description gp:[GI:g3676414] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf423] [LE:755] [RE:2026] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_6307_f3_182 1429 5201 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_6930462_c2_260 1430 5202 1227 408 634 4.9e−62 Description pir:[LN:E69783] [AC:E69783] [PN:bicyclomycin resistance protein homolog ydgK] [GN:ydgK] [CL:bicyclomycin resistance protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020154:g1881374] [LN:AB001488] [AC:AB001488] [GN:ydgK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:SIMILAR TO BICYCLOMYCIN RESISTANCE PROTEIN.] [LE:146860] [RE:148068] [DI:direct] >gp:[GI:e1182547:g2632881] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydgK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to813890.] [NT:similar to bicyclomycin resistance protein] [LE:12656] [RE:13864] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_7242812_f3_152 1431 5203 627 208 373 2.2e−34 Description sp:[LN:3MGH_BACSU] [AC:P94378] [GN:YXLJ] [OR:BACILLUS SUBTILIS] [EC:3.2.2.-] [DE:PUTATIVE 3-METHYLADENINE DNA GLYCOSYLASE,] [SP:P94378] [DB:swissprot] >pir:[LN:D70082] [AC:D70082] [PN:DNA-3-methyladenine glycosidase homolog yxlJ] [GN:yxlJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186361:g2636397] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:yxlJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:similar to DNA-3-methyladenine glycosidase] [SP:P94378] [LE:164671] [RE:165261] [DI:complement] >gp:[GI:d1012408:g1783264] [LN:D83026] [AC:D83026:D45911] [GN:yxlJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence covering lic-cel region.] [NT:homologous to DNA glycosylases; hypothetical] [LE:59204] [RE:59794] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_803137_f1_5 1432 5204 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_804837_f1_59 1433 5205 963 320 342 4.3e−31 Description gp:[GI:e327689:g2407930] [LN:LLPFLDB13] [AC:AJ000326] [GN:orfA] [FN:putative membrane protein] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis pfl gene (strain DB1341).] [LE:464] [RE:1381] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_814838_c1_208 1434 5206 660 219 472 7.1e−45 Description pir:[LN:D69821] [AC:D69821] [PN:hypothetical protein yhbJ] [GN:yhbJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182889:g2633223] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhbJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [LE:173758] [RE:174423] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_837578_c3_326 1435 5207 1233 410 708 7.0e−70 Description pir:[LN:D70179] [AC:D70179] [PN:Na+/H+ antiporter (nhaC-1) homolog] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2688567] [LN:AE001165] [AC:AE001165:AE000783] [PN:Na+/H+ antiporter (nhaC-1)] [GN:BB0637] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 51 of 70) of the complete genome.] [NT:similar to GB:M73530 SP:P27611 PID:143245] [LE:6377] [RE:7726] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_8568_c3_289 1436 5208 429 142 73 0.017 Description gp:[GI:g4151243] [LN:AF063590] [AC:AF063590] [PN:microcin E492 immunity protein] [GN:mceB] [OR:Klebsiella pneumoniae] [DB:genpept-bct2] [DE:Klebsiella pneumoniae microcin E492 precursor (mceA) and microcinE492 immunity protein (mceB) genes, complete cds.] [NT:overlapping with mceA] [LE:541] [RE:828] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_901515_c3_318 1437 5209 285 94 81 0.0019 Description gp:[GI:g4731215] [LN:BMMITOCH03] [AC:AF110612] [PN:cytochrome b apoenzyme] [GN:Cytb] [OR:Mitochondrion Boophilus microplus] [SR:southern cattle tick] [DB:genpept-inv2] [DE:Boophilus microplus cytochrome b apoenzyme (Cytb) gene, partialcds; tRNA-Ser, tRNA-Leu, tRNA-Cys, and tRNA-Met genes, completesequence; and NADH dehydrogenase subunit 2 (ND2) gene, partial cds,mitochondrial genes for mitochondrial products.] [LE:<1] [RE:285] [DI:direct] >gp:[GI:g4731215] [LN:BMMITOCH03] [AC:AF110612] [PN:cytochrome b apoenzyme] [GN:Cytb] [OR:Mitochondrion Boophilus microplus] [SR:southern cattle tick] [DB:genpept] [DE:Boophilus microplus cytochrome b apoenzyme (Cytb) gene, partialcds; tRNA-Ser, tRNA-Leu, tRNA-Cys, and tRNA-Met genes, completesequence; and NADH dehydrogenase subunit 2 (ND2) gene, partial cds,mitochondrial genes for mitochondrial products.] [LE:<1] [RE:285] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_968751_f2_63 1438 5210 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_975261_f3_149 1439 5211 168 55 60 0.022 Description sp:[LN:YC36_GUITH] [AC:O78501] [GN:YCF36] [OR:GUILLARDIA THETA] [SR:,CRYPTOMONAS PHI] [DE:HYPOTHETICAL 18.4 KD PROTEIN YCF36] [SP:O78501] [DB:swissprot] >gp:[GI:g3603031] [LN:AF041468] [AC:AF041468:X14171:X62349:X51511:X14504:X52158:X52912:X56806:M7654 7] [PN:hypothetical chloroplast RF36] [GN:ycf36] [OR:Chloroplast Guillardia theta] [SR:Guillardia theta] [DB:genpept-pln2] [DE:Guillardia theta complete plastid genome.] [LE:88514] [RE:88981] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_9797911_f3_139 1440 5212 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_984628_f2_65 1441 5213 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_990952_f3_155 1442 5214 1209 402 744 1.1e−73 Description gp:[GI:d1042605:g5103194] [LN:AP000342] [AC:AP000342] [GN:ydhA] [OR:Plasmid R100] [SR:Plasmid R100 (lab_host:Escherichia coli strain K-12) DNA] [DB:genpept] [DE:Plasmid R100 genomic DNA.] [NT:58% identical (1 gap) to 376 residues of 404 aa] [LE:37813] [RE:39018] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000986_9944132_f1_20 1443 5215 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10188258_f1_158 1444 5216 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10547152_f1_153 1445 5217 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10662763_c2_764 1446 5218 1089 362 688 9.2e−68 Description sp:[LN:YACL_BACSU] [AC:Q06754] [GN:YACL] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 40.9 KD PROTEIN IN MECB-GLTX INTERGENIC REGION] [SP:Q06754] [DB:swissprot] >pir:[LN:S66118] [AC:S66118:D69741] [PN:conserved hypothetical protein yacL] [GN:yacL] [CL:conserved hypothetical protein yacL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005865:g467477] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:172273] [RE:173373] [DI:direct] >gp:[GI:e1182022:g2632356] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yacL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to hypothetical proteins] [SP:Q06754] [LE:108671] [RE:109771] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10667002_c1_690 1447 5219 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10734838_c2_819 1448 5220 996 331 397 6.3e−37 Description sp:[LN:ER19_YEAST] [AC:P32377] [GN:ERG19:MVD1:MPD:YNR043W:N3427] [OR:SACCHAROMYCES CEREVISIAE] [SR:,BAKER'S YEAST] [EC:4.1.1.33] [DE:PYROPHOSPHATE DECARBOXYLASE)] [SP:P32377] [DB:swissprot] >pir:[LN:S63374] [AC:S63374:S20057] [PN:diphosphomevalonate decarboxylase,:protein N3427:protein YNR043w] [GN:MVD1:ERG19:MPD] [OR:Saccharomyces cerevisiae] [EC:4.1.1.33] [DB:pir2] [MP:14R] >gp:[GI:e238625:g1292890] [LN:SCERG19] [AC:X97557] [PN:diphosphomevalonate decarboxylase] [GN:ERG19] [OR:Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [EC:4.1.1.33] [DE:S.cerevisiae ERG19 gene.] [SP:P32377] [LE:544] [RE:1734] [DI:direct] >gp:[GI:e239591:g1302550] [LN:SCYNR043W] [AC:Z71658:Y13139] [GN:MVD1] [OR:Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [DE:S.cerevisiae chromosome XIV reading frame ORF YNR043w.] [NT:ORF YNR043w] [SP:P32377] [LE:229] [RE:1419] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10735832_c1_722 1449 5221 273 90 67 0.0041 Description pir:[LN:E71854] [AC:E71854] [PN:hypothetical protein jhp1053] [GN:jhp1053] [OR:Helicobacter pylori] [SR:strain J99, , strain J99] [SR:strain J99,] [DB:pir2] >gp:[GI:g4155644] [LN:AE001533] [AC:AE001533:AE001439] [PN:putative] [GN:jhp1053] [OR:Helicobacter pylori J99] [DB:genpept-bct2] [DE:Helicobacter pylori, strain J99 section 94 of 132 of the completegenome.] [NT:similar to H. pylori 26695 gene HP1124] [LE:5370] [RE:6365] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_10928_c2_757 1450 5222 1242 413 230 1.2e−16 Description pir:[LN:T03492] [AC:T03492] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:pir2] [MP:1] >gp:[GI:g3128293] [LN:AF010496] [AC:AF010496] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:genpept-bct2] [DE:Rhodobacter capsulatus strain SB1003, partial genome.] [LE:54291] [RE:55613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_110766_f1_13 1451 5223 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_117893_c3_957 1452 5224 426 141 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_11894032_c3_930 1453 5225 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_12267167_c2_786 1454 5226 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_1227250_f3_539 1455 5227 996 331 562 2.1e−54 Description sp:[LN:YXEI_BACSU] [AC:P54948] [GN:YXEI:LP9A] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 37.2 KD PROTEIN IN IDH-DEOR INTERGENIC REGION] [SP:P54948] [DB:swissprot] >pir:[LN:C70075] [AC:C70075] [PN:penicillin amidase homolog yxeI] [GN:yxeI] [CL:choloylglycine hydrolase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184679:g2636500] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxeI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281to 4214814.] [NT:similar to penicillin amidase] [SP:P54948] [LE:62053] [RE:63039] [DI:complement] >gp:[GI:d1008921:g1408494] [LN:D45912] [AC:D45912] [GN:yxeI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (Marburg 168; trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence between the iol and hut operon,partial and complete cds.] [NT:homologous to penicillin acylase] [LE:8437] [RE:9423] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_12516511_c2_813 1456 5228 129 42 164 4.7e−12 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, completecds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_12601637_c3_898 1457 5229 144 47 76 0.0065 Description pir:[LN:B70148] [AC:B70148] [PN:ribosomal protein S12] [GN:BB0387:rpsL] [CL:Escherichia coli ribosomal protein S12] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2688295] [LN:AE001144] [AC:AE001144:AE000783] [PN:ribosomal protein S12 (rpsL)] [GN:BB0387] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 30 of 70) of the complete genome.] [NT:similar to SP:P18662 percent identity: 79.03;] [LE:1809] [RE:2183] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_12714833_c2_863 1458 5230 1218 405 95 0.021 Description pir:[LN:S72278] [AC:S72278:S78483] [PN:ATP-dependent Clp proteinase, homolog] [GN:clpC] [OR:plastid Plasmodium falciparum] [EC:3.4.21.-] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_12902217_f2_349 1459 5231 681 226 292 8.5e−26 Description pir:[LN:D69906] [AC:D69906] [PN:hypothetical protein yojG] [GN:yojG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185418:g2634339] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yojG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [LE:120715] [RE:121143] [DI:complement] >gp:[GI:g3169323] [LN:AF026147] [AC:AF026147] [PN:YojG] [GN:yojG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis YojA (yojA), YojB (yojB), YojC (yojC), YojD(yojD), YojE (yojE), YojF (yojF), YojG (yojG), YojH (yojH), YojI(yojI), YojJ (yojJ), YojK (yojK), YojL (yojL), YojM (yojM), YojN(yojN), and YojO (yojO) genes, complete cds; and OdhA (odhA) gene,partial cds.] [LE:4122] [RE:4550] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_12932802_f1_115 1460 5232 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_134702_f1_113 1461 5233 834 277 673 3.6e−66 Description sp:[LN:THID_BACSU] [AC:P39610] [GN:THID:IPA-52R] [OR:BACILLUS SUBTILIS] [EC:2.7.4.7] [DE:(HMP-P KINASE)] [SP:P39610] [DB:swissprot] >pir:[LN:S39707] [AC:S39707:F69722] [PN:phosphomethylpyrimidine kinase thiD:protein ipa-52r] [GN:thiD] [CL:phosphomethylpyrimidine phosphate kinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413976] [LN:BSGENR] [AC:X73124] [GN:ipa-52r] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic region (325 to 333).] [SP:P39610] [LE:55788] [RE:56603] [DI:complement] >gp:[GI:e1186301:g2636337] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:phosphomethylpyrimidine kinase] [GN:thiD] [FN:thiamin biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.4.7] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ywdB, ipa-52r] [SP:P39610] [LE:101359] [RE:102174] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_13695125_c2_771 1462 5234 603 200 117 9.1e−06 Description gp:[GI:g3025463] [LN:CAU58131] [AC:U58131] [PN:SigX] [GN:sigX] [OR:Clostridium acetobutylicum] [DB:genpept-bct2] [DE:Clostridium acetobutylicum pho-sigX gene region, phoP, phoR, sigX,orf36, and orf18 genes, complete cds.] [NT:proposed ECF subfamily RNA polymerase sigmafactor] [LE:3293] [RE:3847] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_1379061_c3_991 1463 5235 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_13835930_c3_950 1464 5236 276 91 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_13876005_c1_677 1465 5237 339 112 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14254437_c3_903 1466 5238 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14460882_f1_107 1467 5239 177 58 236 7.3e−20 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, completecds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14501556_f2_325 1468 5240 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14537578_c2_763 1469 5241 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14547143_c3_912 1470 5242 522 173 501 6.0e−48 Description sp:[LN:YAAJ_BACSU] [AC:P21335] [GN:YAAJ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 17.8 KD PROTEIN IN SERS-DNAH INTERGENIC REGION] [SP:P21335] [DB:swissprot] >pir:[LN:S11690] [AC:S11690:S66048:B69737] [PN:conserved hypothetical protein yaaJ] [GN:yaaJ] [CL:hypothetical protein Yaaj] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005796:g467408] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:89452] [RE:89937] [DI:direct] >gp:[GI:g40011] [LN:BSORF17] [AC:X52144] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for ORF17, small cytoplasmic RNA and partialdnaX gene.] [NT:ORF17 (AA 1–161)] [SP:P21335] [LE:129] [RE:614] [DI:direct] >gp:[GI:e1181951:g2632285] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to hypothetical proteins] [SP:P21335] [LE:25850] [RE:26335] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14587817_f3_520 1471 5243 528 175 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14647510_f1_27 1472 5244 255 84 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14879688_c1_704 1473 5245 927 308 234 5.1e−26 Description pir:[LN:A71042] [AC:A71042] [PN:probable mevalonate kinase] [GN:PH1625] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031680:g3258054] [LN:AP000006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:335aa long hypothetical mevalonate kinase] [GN:PH1625] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001–1485000 nt. position(6/7).] [NT:similar to owl:MTU47134 percent identity: 41.993 in] [LE:275590] [RE:276597] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14882681_c1_717 1474 5246 210 69 99 2.4e−05 Description gp:[GI:g2897106] [LN:AF020798] [AC:AF020798] [PN:repressor] [OR:Streptococcus thermophilus bacteriophage TP-J34] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage lysogeny module, integrasehomolog (int), putative host cell surface-exposed lipoprotein,putative metallo-proteinase, repressor, Cro-like regulatoryprotein, and P1-antirepressor homolog genes, complete cds.] [NT:CI-like regulatory protein; orf121] [LE:4825] [RE:5190] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_14885260_c2_839 1475 5247 441 146 209 5.3e−17 Description gp:[GI:g2444132] [LN:U88974] [AC:U88974] [PN:ORF25] [OR:Streptococcus thermophilus temperate bacteriophage O1205] [DB:genpept-phg] [DE:Streptococcus thermophilus temperate bacteriophage O1205, completegenome.] [NT:putative small subunit of the terminase] [LE:13835] [RE:14329] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_15735181_f3_451 1476 5248 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_15782160_c3_905 1477 5249 747 248 469 1.5e−44 Description gp:[GI:g1458327] [LN:CELF08F3] [AC:U64847] [GN:F08F3.4] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain=Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F08F3.] [LE:1515:1817:2044:2841] [RE:1758:1994:2276:3110] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_15892932_c3_902 1478 5250 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16054827_c3_959 1479 5251 357 118 184 2.4e−14 Description pir:[LN:T00183] [AC:T00183] [PN:hypothetical protein 50] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032884:g3341957] [LN:AB009866] [AC:AB009866] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 50] [LE:36701] [RE:37069] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16212803_c2_844 1480 5252 318 105 124 5.4e−08 Description pir:[LN:S58144] [AC:S58144] [PN:gene 15 protein] [OR:phage SPP1] [DB:pir2] >gp:[GI:e244843:g2764862] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 15] [LE:9012] [RE:9320] [DI:direct] >gp:[GI:g1052813] [LN:SPP1HEADG] [AC:X89721] [GN:15] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 head morphogenesis genes 7 to 15.] [NT:product required for head morphogenesis] [LE:5788] [RE:6096] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16413130_f1_128 1481 5253 246 81 146 1.8e−08 Description gp:[GI:g3929312] [LN:AF100426] [AC:AF100426] [PN:fimbriae-associated protein Fap1] [GN:fap1] [OR:Streptococcus parasanguinis] [DB:genpept-bct2] [DE:Streptococcus parasanguis fimbriae-associated protein Fap1 (fap1)gene, complete cds.] [NT:invovled in fimbriae assembly and fimbriae-mediated] [LE:284] [RE:7996] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16603427_c2_861 1482 5254 531 176 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16681687_c1_635 1483 5255 1029 342 694 2.1e−68 Description sp:[LN:YACI_BACSU] [AC:P37570] [GN:YACI] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 41.1 KD PROTEIN IN LYSS-MECB INTERGENIC REGION (ORFX)] [SP:P37570] [DB:swissprot] >pir:[LN:S66114] [AC:S66114:I40507:B69741] [PN:creatine kinase homolog yacI] [GN:yacI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005861:g467473] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:166083] [RE:167174] [DI:direct] >gp:[GI:e1182018:g2632352] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yacI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to creatine kinase] [SP:P37570] [LE:102481] [RE:103572] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16798777_c1_646 1484 5256 3558 1185 5906 0.0 Description sp:[LN:RPOB_STAAU] [AC:P47768] [GN:RPOB] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.7.6] [DE:BETA CHAIN] (RNA POLYMERASE BETA SUBUNIT)] [SP:P47768] [DB:swissprot] >pir:[LN:S59951] [AC:S59951] [PN:DNA-directed RNA polymerase, beta chain] [GN:rpoB] [CL:DNA-directed RNA polymerase beta chain] [OR:Staphylococcus aureus] [EC:2.7.7.6] [DB:pir2] >gp:[GI:g677851] [LN:SARPLRPO] [AC:X64172] [PN:DNA-directed RNA polymerase beta chain] [GN:rpoB] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:2.7.7.6] [DE:S.aureus rplL, orf202, rpoB(rif) and rpoC genes for ribosomalprotein L7/L12, hypothetical protein ORF202, DNA-directed RNApolymerase beta & beta′ chains.] [SP:P47768] [LE:1222] [RE:4770] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_16972575_f1_196 1485 5257 186 61 76 0.036 Description gp:[GI:g4580755] [LN:AF061085] [AC:AF061085] [PN:P-glycoprotein] [OR:Gossypium herbaceum] [DB:genpept-pln2] [DE:Gossypium herbaceum P-glycoprotein gene, partial cds.] [NT:similar to P-glycoprotein in Hordeum vulgare and] [LE:<22] [RE:>894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_1702_f2_209 1486 5258 522 173 88 0.0089 Description pir:[LN:T00168] [AC:T00168] [PN:hypothetical protein 33] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032869:g3341942] [LN:AB009866] [AC:AB009866] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 33] [LE:28172] [RE:28582] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_19690876_c3_935 1487 5259 876 291 662 5.3e−65 Description sp:[LN:YWFL_BACSU] [AC:P39648] [GN:YWFL:IPA-90D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.4 KD PROTEIN IN PTA 3′REGION] [SP:P39648] [DB:swissprot] >pir:[LN:S39745] [AC:S39745:D70056] [PN:ywfL protein:hypothetical protein ipa-90d] [GN:ywfL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g414014] [LN:BSGENR] [AC:X73124] [GN:ipa-90d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic region (325 to 333).] [SP:P39648] [LE:93300] [RE:94145] [DI:direct] >gp:[GI:e1186264:g2636300] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywfL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ipa-90d] [SP:P39648] [LE:63814] [RE:64659] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_19695386_c3_953 1488 5260 771 256 111 0.00059 Description pir:[LN:T00180] [AC:T00180] [PN:hypothetical protein 46] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032881:g3341954] [LN:AB009866] [AC:AB009866] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 46] [LE:35157] [RE:36050] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20078287_f3_533 1489 5261 825 274 145 2.5e−07 Description pir:[LN:B70798] [AC:B70798] [PN:probable membrane protein] [GN:Rv3737] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e1264597:g2960161] [LN:MTV025] [AC:AL022121:AL123456] [PN:hypothetical protein Rv3737] [GN:Rv3737] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 155/162.] [NT:Rv3737, (MTV025.085), len: 529. Probable membrane] [LE:94796] [RE:96385] [DI:direct] >gp:[GI:e1264597:g2960161] [LN:MTV025] [AC:AL022121:AL123456] [PN:hypothetical protein Rv3737] [GN:Rv3737] [OR:Mycobacterium tuberculosis] [DB:genpept] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 155/162.] [NT:Rv3737, (MTV025.085), len: 529. Probable membrane] [LE:94796] [RE:96385] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20087752_f2_352 1490 5262 1506 501 397 2.5e−36 Description sp:[LN:TAGE_BACSU] [AC:P13484] [GN:TAGE:RODD:GTAA] [OR:BACILLUS SUBTILIS] [EC:2.4.1.52] [DE:(EC 2.4.1.52) (TEICHOIC ACID BIOSYNTHESIS PROTEIN E)] [SP:P13484] [DB:swissprot] >pir:[LN:S06048] [AC:S06048:F69720] [PN:poly(glycerol-phosphate) alpha-glucosyltransferase, tagE:probable rodD protein:UDP-glucose--polyglycerol phosphate glucosyltransferase tagE] [GN:tagE:rodD] [OR:Bacillus subtilis] [EC: 2.4.1.52] [DB:pir2] [MP:310 degrees] >gp:[GI:g580920] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodD (gtaA) polypeptide (AA 1–673)] [SP:P13484] [LE:157] [RE:2178] [DI:direct] >gp:[GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] >gp:[GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] [EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20322153_c2_818 1491 5263 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20331552_c1_659 1492 5264 996 331 447 3.2e−42 Description pir:[LN:C69066] [AC:C69066] [PN:ornithine cyclodeaminase] [GN:MTH1495] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2622612] [LN:AE000910] [AC:AE000910:AE000666] [PN:ornithine cyclodeaminase] [GN:MTH1495] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct2] [DE:Methanobacterium thermoautotrophicum from bases 1349621 to 1362200 (section 116 of 148) of the complete genome.] [NT:Function Code:5.09- L-Amino Acid Metabolism,] [LE:963] [RE:1982] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20511590_c3_893 1493 5265 384 127 414 1.0e−38 Description sp:[LN:RL7_MICLU] [AC:P02395] [GN:RPLL] [OR:MICROCOCCUS LUTEUS] [SR:,MICROCOCCUS LYSODEIKTICUS] [DE:50S RIBOSOMAL PROTEIN L7/L12 (MA1/MA2)] [SP:P02395] [DB:swissprot] >pir:[LN:R7MCML] [AC:A02771] [PN:ribosomal protein L7/L12:ribosomal protein MA] [CL:Escherichia coli ribosomal protein L12] [OR:Micrococcus luteus:Micrococcus lysodeikticus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20756260_c1_729 1494 5266 408 135 184 2.4e−14 Description pir:[LN:T00194] [AC:T00194] [PN:hypothetical protein 61] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032895:g3341968] [LN:AB009866] [AC:AB009866] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 61] [LE:39932] [RE:40402] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_20980262_c2_762 1495 5267 2472 823 2959 0.0 Description sp:[LN:MECB_BACSU] [AC:P37571] [GN:MECB:CLPC] [OR:BACILLUS SUBTILIS] [DE:NEGATIVE REGULATOR OF GENETIC COMPETENCE MECB] [SP:P37571] [DB:swissprot] >pir:[LN:I40508] [AC:I40508:S66115:I40385:H69600] [PN:class III stress response-related ATPase clpC:adenosine triphosphatase clpC:clpA/clpB protein homolog] [GN:clpC:mecB] [CL:ATP-dependent Clp proteinase chain A] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005862:g467474] [LN:BAC180K] [AC:D26185] [PN:clpA/clpB family] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:167171] [RE:169603] [DI:direct] >gp:[GI:g442360] [LN:BSU02604] [AC:U02604] [PN:ClpC adenosine triphosphatase] [GN:mecB] [FN:competence gene repressor; required for cell] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis Marburg 168 ClpC adenosine triphosphatase (mecB)gene, complete cds, orfX and orfY, partial cds.] [LE:335] [RE:2767] [DI:direct] >gp:[GI:e1182019:g2632353] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:class III stress response-related ATPase] [GN:clpC] [FN:negative regulator of late competence genes;] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: mecB] [SP:P37571] [LE:103569] [RE:106001] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_2117202_c2_831 1496 5268 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_21484465_c2_848 1497 5269 516 171 98 0.019 Description gp:[GI:g3702331] [LN:ATAC005397] [AC:AC005397] [GN:T3F17.17] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln2] [DE:Arabidopsis thaliana chromosome II BAC T3F17 genomic sequence,complete sequence.] [NT:hypothetical protein] [LE:52308:52593:52780:53023] [RE:52505:52691:52902:53157] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_21598838_f3_534 1498 5270 465 154 155 7.2e−11 Description sp:[LN:YJJP_HAEIN] [AC:P44520] [GN:HI0108] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI0108] [SP:P44520] [DB:swissprot] >pir:[LN:I64142] [AC:I64142] [PN:hypothetical protein HI0108] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573061] [LN:U32696] [AC:U32696:L42023] [PN:conserved hypothetical protein] [GN:HI0108] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 11 of 163 of the complete genome.] [NT:similar to GB:U14003 SP:P39402 PID:537207 GB:U00096] [LE:4095] [RE:4988] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_21603777_f1_144 1499 5271 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_21758468_c3_992 1500 5272 489 162 123 6.9e−08 Description pir:[LN:B70351] [AC:B70351] [PN:ribosomal-protein-alanine acetyltransferase] [GN:rimI] [CL:Escherichia coli peptide N-acetyltransferase rimI] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983204] [LN:AE000696] [AC:AE000696:AE000657] [PN:ribosomal-protein-alanine acetyltransferase] [GN:rimI] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 28 of 109 of the complete genome.] [LE:3558] [RE:4022] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22042128_f3_519 1501 5273 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22069160_c1_652 1502 5274 393 130 623 7.1e−61 Description sp:[LN:RS12_STAAU] [AC:P48942] [GN:RPSL] [OR:STAPHYLOCOCCUS AUREUS] [DE:30S RIBOSOMAL PROTEIN S12] [SP:P48942] [DB:swissprot] >gp:[GI:g706921] [LN:SAU20869] [AC:U20869] [PN:ribosomal protein S12] [GN:rpsL] [OR:Staphylococcus aureus] [DB genpept-bct2] [DE:Staphylococcus aureus ribosomal protein S12 (rpsL) gene, completecds, ribosomal protein S7 (rpsG) and ORF 1 genes, partial cds.] [LE:418] [RE:831] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_2211036_f2_414 1503 5275 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22272200_c1_735 1504 5276 939 312 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22400261_c2_843 1505 5277 834 277 634 4.9e−62 Description gp:[GI:e139438:g1369939] [LN:BTP9011] [AC:X84706] [PN:major head protein] [GN:mhp] [OR:Bacteriophage B1] [DB:genpept-phg] [DE:Bacteriophage TP901-1 genomic region.] [LE:360] [RE:1181] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22539010_f3_603 1506 5278 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22539186_f1_67 1507 5279 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22689067_f1_205 1508 5280 1221 406 1218 6.3e−124 Description sp:[LN:NUPC_BACSU] [AC:P39141] [GN:NUPC] [OR:BACILLUS SUBTILIS] [DE:PYRIMIDINE NUCLEOSIDE TRANSPORT PROTEIN] [SP:P39141] [DB:swissprot] >gp:[GI:d1008934:g1408507] [LN:D45912] [AC:D45912] [PN:pyrimidine nucleoside transport protein] [GN:nupC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (Marburg 168; trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence between the iol and hut operon,partial and complete cds.] [LE:20443] [RE:21624] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22694377_c2_776 1509 5281 741 246 762 1.3e−75 Description pir:[LN:S59955] [AC:S59955] [PN:hypothetical protein 202] [CL:hypothetical protein MJ0882] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g677850] [LN:SARPLRPO] [AC:X64172] [PN:hypothetical protein] [GN:ORF202] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S.aureus rplL, orf202, rpoB(rif) and rpoC genes for ribosomalprotein L7/L12, hypothetical protein ORF202, DNA-directed RNApolymerase beta & beta′ chains.] [LE:399] [RE:1007] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22773302_c1_741 1510 5282 1803 600 1371 3.9e−140 Description gp:[GI:e286568:g2764983] [LN:BP187PLYH] [AC:Y07740] [PN:cell wall hydrolase Ply187] [GN:ply187] [OR:Staphylococcus phage 187] [DB:genpept-phg] [DE:Staphylococcus phage 187 ply187 and hol187 genes.] [LE:222] [RE:2108] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_22790941_c2_847 1511 5283 543 180 143 5.2e−10 Description gp:[GI:e244714:g2764866] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 17.1] [LE:10481] [RE:11014] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23442135_c1_685 1512 5284 675 224 156 7.9e−11 Description pir:[LN:F71309] [AC:F71309] [PN:probable phosphoglycolate phosphatase (gph-2)] [GN:TP0554] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322848] [LN:AE001231] [AC:AE001231:AE000520] [PN:phosphoglycolate phosphatase (gph-2)] [GN:TP0554] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 47 of 87 of the complete genome.] [NT:similar to GB:L42023 SP:P44755 PID:1004013] [LE:1483] [RE:2151] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23469213_c2_838 1513 5285 411 136 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23477213_c1_701 1514 5286 1011 336 1085 7.9e−110 Description pir:[LN:S39743] [AC:S39743:D69683] [PN:phosphotransacetylase pta] [GN:pta] [CL:phosphate acetyltransferase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g580883] [LN:BSGENR] [AC:X73124] [GN:ipa-88d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic region (325 to 333).] [SP:P39646] [LE:91234] [RE:92205] [DI:direct] >gp:[GI:e1186266:g2636302] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:phosphotransacetylase] [GN:pta] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.1.8] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ipa-88d, ywfJ] [SP:P39646] [LE:65754] [RE:66725] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23554700_c3_1002 1515 5287 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23572178_c3_958 1516 5288 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23601637_c2_794 1517 5289 816 271 374 1.7e−34 Description pir:[LN:S60902] [AC:S60902:S49238:S44071] [PN:CDP-ribitol pyrophosphorylase] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g471234] [LN:HISBCAL] [AC:X78559] [OR:Haemophilus influenzae] [DB:genpept-bct1] [DE:H.influenzae DNA for serotype b capsulation locus.] [NT:orf1] [LE:434] [RE:1858] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23603391_c3_969 1518 5290 294 97 94 0.00030 Description gp:[GI:e1389970:g4539393] [LN:ATF28A21] [AC:AL035526] [PN:hypothetical protein] [GN:F28A21.150] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln1] [DE:Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSAproject).] [LE:62401:62755:63247] [RE:62693:63126:63337] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23617140_c1_686 1519 5291 1404 467 441 6.0e−44 Description pir:[LN:A69832] [AC:A69832] [PN:long-chain fatty-acid-CoA ligase homolog yhfT] [GN:yhfT] [CL:acetate--CoA ligase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183038:g2633372] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhfT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to long-chain fatty-acid-CoA ligase] [LE:110451] [RE:111890] [DI:complement] >gp:[GI:e324999:g2226256] [LN:BSY14084] [AC:Y14084] [PN:hypothetical protein] [GN:yhfT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis chromosomal DNA, region 78–80 degrees: aprE to comK.] [NT:similarity to long-chain-acyl-CoA synthetase from] [LE:4879] [RE:6318] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23673313_f2_408 1520 5292 198 65 64 0.0061 Description gp:[GI:g3329651] [LN:CELT17A3] [AC:AF078787] [GN:T17A3.9] [OR:Caenorhabditis elegans] [DB:genpept-inv2] [DE:Caenorhabditis elegans cosmid T17A3.] [LE:15875:16120:16852] [RE:16060:16380:17211] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23709631_c1_676 1521 5293 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23712830_c1_713 1522 5294 489 162 227 6.6e−19 Description gp:[GI:g4049992] [LN:AF077306] [AC:AF077306] [PN:gp157] [OR:Streptococcus thermophilus bacteriophage Sfi19] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage Sfi19 gp157, gp233,putative helicase , gp151, gp271, putative primase, and gp143genes, complete cds.] [NT:orf157] [LE:1] [RE:474] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23867125_f2_333 1523 5295 204 67 57 0.018 Description pir:[LN:S21443] [AC:S21443] [PN:hypothetical protein] [OR:Dictyostelium discoideum] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_23910052_f3_585 1524 5296 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_2392837_c1_732 1525 5297 426 141 226 8.4e−19 Description gp:[GI:e244844:g2764864] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 16.1] [LE:9632] [RE:10066] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24026077_c3_966 1526 5298 954 317 560 3.4e−54 Description pir:[LN:S58137] [AC:S58137:S24456] [PN:gene 7 protein] [OR:phage SPP1] [DB:pir2] >gp:[GI:e244838:g2764848] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 7] [LE:3802] [RE:4728] [DI:direct] >gp:[GI:g1052806] [LN:SPP1HEADG] [AC:X89721] [GN:7] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 head morphogenesis genes 7 to 15.] [NT:product required for head morphogenesis] [LE:578] [RE:1504] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24026576_c2_854 1527 5299 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24229837_c1_716 1528 5300 243 80 97 3.9e−05 Description pir:[LN:A56273] [AC:A56273] [PN:hypothetical protein (bacteriocin saiA 3′-region)] [OR:Lactobacillus sake] [DB:pir2] >gp:[GI:g599850] [LN:LSSAKACLU] [AC:Z46867] [GN:orf1] [OR:Lactobacillus sakei] [DB:genpept-bct1] [DE:L.sake sakacin A gene cluster.] [LE:5] [RE:268] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24258462_c3_982 1529 5301 336 111 200 4.8e−16 Description gp:[GI:g928831] [LN:BK5TATTP] [AC:L44593] [FN:unidentified] [OR:Lactococcus lactis phage BK5-T] [SR:Bacteriophage BK5-T DNA] [DB:genpept-phg] [DE:Bacteriophage BK5-T ORF′410, 3′ end pf cds, 20 ORFs, repressorprotein, and Cro repressor protein genes, complete cds, ORF70′gene, 5′ end of cds.] [NT:ORF95; putative] [LE:7452] [RE:7739] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24275342_c1_718 1530 5302 378 125 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24320256_f1_134 1531 5303 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24328127_f3_452 1532 5304 204 67 154 2.6e−10 Description sp:[LN:YKGC_ECOLI] [AC:P77212] [GN:YKGC] [OR:ESCHERICHIA COLI] [DE:INTERGENIC REGION] [SP:P77212] [DB:swissprot] >pir:[LN:H64756] [AC:H64756] [PN:probable mercury(II) reductase,:ykgC protein] [GN:ykgC] [OR:Escherichia coli] [EC:1.16.1.1] [DB:pir2] >gp:[GI:g1657503] [LN:ECU73857] [AC:U73857] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli chromosome minutes 6–8.] [NT:similar to S. aureus mercury(II) reductase] [LE:26473] [RE:27825] [DI:complement] >gp:[GI:g1786495] [LN:AE000137] [AC:AE000137:U00096] [PN:putative oxidoreductase] [GN:ykgC] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 27 of 400 of the completegenome.] [NT:f450; 35 pct identical (29 gaps) to 430 residues of] [LE:6292] [RE:7644] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24337800_c2_862 1533 5305 1386 461 945 5.4e−95 Description pir:[LN:T00158] [AC:T00158] [PN:amidase,] [OR:Staphylococcus aureus phage phi PVL] [EC:3.5.-.-] [DB:pir3] >gp:[GI:d1032859:g3341932] [LN:AB009866] [AC:AB009866] [PN:amidase (peptidoglycan hydrolase)] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 25] [LE:20199] [RE:21653] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_2438878_f1_126 1534 5306 213 70 288 2.3e−25 Description sp:[LN:ARSC_STAAU] [AC:P30330] [GN:ARSC] [OR:STAPHYLOCOCCUS AUREUS] [DE:ARSENATE REDUCTASE (ARSENICAL PUMP MODIFIER)] [SP:P30330] [DB:swissprot] >pir:[LN:D41903] [AC:D41903] [PN:arsenate reductase,] [GN:arsC] [CL:protein-tyrosine-phosphatase, low molecular weight] [OR:Staphylococcus aureus] [EC:1.-.-.-] [DB:pir1] >gp:[GI:g150729] [LN:PI2ARSRBC] [AC:M86824] [PN:arsenate reductase] [GN:arsC] [FN:Reduction of arsenate to arsenite] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 arsenic resistance operon (arsRBC) genes, completecds.] [LE:1894] [RE:2289] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24401462_c3_921 1535 5307 591 196 367 9.6e−34 Description sp:[LN:YCKF_BACSU] [AC:P42404] [GN:YCKF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 20.0 KD PROTEIN IN TLPC-SRFAA INTERGENIC REGION (ORF9)] [SP:P42404] [DB:swissprot] >pir:[LN:H69760] [AC:H69760] [PN:conserved hypothetical protein yckF] [GN:yckF] [CL:conserved hypothetical protein MJ1247] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1007003:g1438846] [LN:BACYCK] [AC:D30762] [PN:unknown] [GN:yckF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168trpC2) DNA, clone_lib:lambda DASHI] [DB:genpept-bct1] [DE:Bacillus subtilis DNA around 28 degrees region of chromosomecontaining yckA-H genes.] [LE:7448] [RE:8005] [DI:complement] >gp:[GI:e1182297:g2632631] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yckF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:similar to hypothetical proteins] [LE:179524] [RE:180081] [DI:complement] >gp:[GI:d1009614:g1805417] [LN:D50453] [AC:D50453] [GN:yckF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:53828] [RE:54385] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24407327_c1_643 1536 5308 696 231 892 2.2e−89 Description pir:[LN:E69694] [AC:E69694:S39861:S40073] [PN:ribosomal protein L1] [GN:rplA] [CL:Escherichia coli ribosomal protein L1] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182036:g2632370] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L1 (BL1)] [GN:rplA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [SP:Q06797] [LE:119107] [RE:119805] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24414050_c2_806 1537 5309 2793 930 4374 0.0 Description gp:[GI:e1296735:g3201550] [LN:SEY17116] [AC:Y17116] [PN:fibrinogen-binding protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis gene encoding fibrinogen-bindingprotein, complete CDS.] [LE:38] [RE:3316] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24415875_c1_660 1538 5310 300 99 129 1.7e−07 Description gp:[GI:g1458327] [LN:CELF08F3] [AC:U64847] [GN:F08F3.4] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain=Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F08F3.] [LE:1515:1817:2044:2841] [RE:1758:1994:2276:3110] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24422175_f2_402 1539 5311 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24429643_c2_793 1540 5312 222 73 58 0.011 Description sp:[LN:YA28_PYRHO] [AC:O58584] [GN:PHAL028] [OR:PYROCOCCUS HORIKOSHII] [DE:HYPOTHETICAL PROTEIN PHAL028] [SP:O58584] [DB:swissprot] >pir:[LN:B71136] [AC:B71136] [PN:hypothetical protein PH0854] [GN:PH0854] [CL:hypothetical protein HI0719] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030891:g3257265] [LN:AP000003] [AC:AP000003:AB009484:AB009485:AB009486:AB009487:AB009488:AB009489] [PN:137aa long hypothetical protein] [GN:PH0854] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept−bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 544001–777000 nt. position(3/7).] [NT:similar to Swiss_Prot:P37552 percent identity:] [LE:218223] [RE:218636] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24491037_c1_719 1541 5313 495 164 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24500387_c3_961 1542 5314 564 187 85 0.0016 Description sp:[LN:Y53_BPT3] [AC:P20327] [GN:5.3] [OR:BACTERIOPHAGE T3] [DE:HYPOTHETICAL GENE 5.3 PROTEIN] [SP:P20327] [DB:swissprot] >pir:[LN:S07514] [AC:S07514] [PN:gene 5.3 protein] [GN:5.3] [CL:phage T7 gene 2.8 protein] [OR:phage T3] [DB:pir2] >gp:[GI:g15705] [LN:POT3111G] [AC:X17255] [GN:5.3] [OR:Bacteriophage T3] [DB:genpept-phg] [DE:Bacteriophage T3 gene 1 to gene 11.] [SP:P20327] [LE:12333] [RE:12638] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_245953_c3_881 1543 5315 579 192 231 2.5e−19 Description gp:[GI:g1314295] [LN:LMU40604] [AC:U40604] [FN:unknown] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes ClpC ATPase (mec) gene, complete cds.] [NT:ORF2; putative 19 kDa protein] [LE:672] [RE:1196] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24617130_c3_896 1544 5316 3648 1215 5258 0.0 Description gp:[GI:e187583:g1495791] [LN:SARPOCGEN] [AC:X89233] [PN:DNA-directed RNA polymerase] [GN:rpoC] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:2.7.7.6] [DE:S.aureus DNA for rpoC gene.] [NT:B′ subunit] [SP:P47770] [LE:<1] [RE:>3171] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24648937_c3_924 1545 5317 657 218 626 3.4e−61 Description sp:[LN:UNG_BACSU] [AC:P39615] [GN:UNG:IPA-57D] [OR:BACILLUS SUBTILIS] [EC:3.2.2.-] [DE:URACIL-DNA GLYCOSYLASE, (UDG)] [SP:P39615] [DB:swissprot] >pir:[LN:S39712] [AC:S39712:H69728] [PN:uracil-DNA glycosylase, ung] [GN:ung] [CL:uracil-DNA glycosylase] [OR:Bacillus subtilis] [EC:3.2.2.-] [DB:pir2] >gp:[GI:g580875] [LN:BSGENR] [AC:X73124] [GN:ipa-57d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic region (325 to 333).] [SP:P39615] [LE:59206] [RE:59883] [DI:direct] >gp:[GI:e1186296:g2636332] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:uracil-DNA glycosylase] [GN:ung] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.2.2.-] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ipa-57d, ywdG] [SP:P39615] [LE:98079] [RE:98756] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24650332_c3_962 1546 5318 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24650468_f3_522 1547 5319 1383 460 711 3.4e−70 Description gp:[GI:d1037645:g4126638] [LN:AB016282] [AC:AB016282] [PN:site-specific recombinase for integration and] [OR:bacteriophage phi-105] [SR:bacteriophage phi-105 DNA] [DB:genpept-phg] [DE:Bacteriophage phi-105 DNA, complete sequence.] [NT:ORF3] [LE:25528] [RE:26952] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24656552_c2_772 1548 5320 150 49 149 1.2e−10 Description sp:[LN:RL33_THEMA] [AC:P35873] [GN:RPMG] [OR:THERMOTOGA MARITIMA] [DE:50S RIBOSOMAL PROTEIN L33] [SP:P35873] [DB:swissprot] >gp:[GI:g407022] [LN:TMNUSGGE] [AC:Z11839] [PN:RIBOSOMAL PROTEIN L33] [OR:Thermotoga maritima] [DB:genpept-bct1] [DE:T.maritima nusG gene and genes for ribosomal proteins.] [SP:P35873] [LE:579] [RE:728] [DI:direct] >gp:[GI:g4980957] [LN:AE001723] [AC:AE001723:AE000512] [PN:ribosomal protein L33] [GN:TM0451] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 35 of 136 of the complete genome.] [NT:similar to SP:P35873 GB:Z11839 PID:407022] [LE:5319] [RE:5468] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24667192_f2_350 1549 5321 183 60 201 1.7e−15 Description sp:[LN:ARSB_STAAU] [AC:P30329] [GN:ARSB] [OR:STAPHYLOCOCCUS AUREUS] [DE:ARSENICAL PUMP MEMBRANE PROTEIN] [SP:P30329] [DB:swissprot] >pir:[LN:C41903] [AC:C41903] [PN:arsenical pump membrane protein] [GN:arsB] [CL:arsenical pump membrane protein] [OR:Staphylococcus aureus] [DB:pir1] >gp:[GI:g150728] [LN:PI2ARSRBC] [AC:M86824] [PN:arsenic efflux pump protein] [GN:arsB] [FN:arsenic efflux pump component (membrane] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 arsenic resistance operon (arsRBC) genes, completecds.] [LE:587] [RE:1876] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24803462_f1_9 1550 5322 861 286 463 6.4e−44 Description sp:[LN:YH17_SYNY3] [AC:P73846] [GN:SLR1717] [OR:SYNECHOCYSTIS SP] [SR:PCC 6803,] [DE:HYPOTHETICAL 30.2 KD PROTEIN SLR1717] [SP:P73846] [DB:swissprot] >pir:[LN:S75043] [AC:S75043] [PN:hypothetical protein slr1717] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1018638:g1652988] [LN:D90910] [AC:D90910:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 12/27, 1430419–1576592.] [NT:ORF_ID:slr1717] [LE:37735] [RE:38541] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24823437_f3_521 1551 5323 495 164 71 0.044 Description gp:[GI:g46550] [LN:SACP221] [AC:X02166] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus plasmid pC221.] [NT:pot. reading-frame C (aa 1–90) (4555 is 2nd base in] [SP:P03866] [LE:4287] [RE:>4555] [DI:direct] >gp:[GI:e190060:g1333818] [LN:SAPC221] [AC:X02529] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus plasmid pC221 complete DNA sequence.] [NT:pot. orfB (aa 1–92) (4557 is 2nd base in codon)] [SP:P03866] [LE:4289] [RE:>4557] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24854637_c2_804 1552 5324 903 300 404 1.1e−37 Description pir:[LN:C70070] [AC:C70070] [PN:conserved hypothetical protein ywtE] [GN:ywtE] [CL:hypothetical protein ywpJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184491:g2636110] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to hypothetical proteins] [LE:97330] [RE:98190] [DI:direct] >gp:[GI:e308093:g1894770] [LN:BSZ92954] [AC:Z92954] [GN:ywtE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis yws[A,B,C,D,E,F,G] and gerBC genes.] [NT:product similar to Bacillus subtilis YxeH and YcsE] [LE:4292] [RE:5152] [DI:complement] >gp:[GI:e1184491:g2636110] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywtE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to hypothetical proteins] [LE:97330] [RE:98190] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_24855325_c3_936 1553 5325 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25398262_f3_622 1554 5326 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25478801_f3_446 1555 5327 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25509692_c3_972 1556 5328 498 165 151 7.4e−11 Description gp:[GI:e244846:g2764870] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 17.5] [LE:11342] [RE:11881] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25578827_c3_897 1557 5329 261 86 334 3.0e−30 Description sp:[LN:YBXF_STAAU] [AC:Q53602] [OR:STAPHYLOCOCCUS AUREUS] [DE:PROBABLE RIBOSOMAL PROTEIN IN RPSL 5′REGION (FRAGMENT)] [SP:Q53602] [DB:swissprot] >gp:[GI:g706920] [LN:SAU20869] [AC:U20869] [PN:unknown] [FN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus ribosomal protein S12 (rpsL) gene, completecds, ribosomal protein S7 (rpsG) and ORF 1 genes, partial cds.] [NT:ORF 1] [LE:<1] [RE:320] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25579662_f3_575 1558 5330 1221 406 849 8.0e−85 Description pir:[LN:H69817] [AC:H69817] [PN:aminoacylase homolog yhaA] [GN:yhaA] [CL:hippurate hydrolase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183009:g2633343] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhaA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to aminoacylase] [LE:80123] [RE:81313] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25660937_c3_990 1559 5331 498 165 175 3.5e−13 Description sp:[LN:OPUC_BACSU] [AC:P46922] [GN:OPUAC] [OR:BACILLUS SUBTILIS] [DE:GLYCINE BETAINE-BINDING PROTEIN PRECURSOR] [SP:P46922] [DB:swissprot] >pir:[LN:I40537] [AC:I40537:F69669] [PN:glycine betaine ABC transporter (glycine betaine-binding protein) opuAC precursor] [GN:opuAC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182252:g2632586] [LN:BSUB0002] [AC:Z99105:AL009126] [PN:glycine betaine ABC transporter (glycine] [GN:opuAC] [FN:glycine betaine transport (osmoprotection)] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [SP:P46922] [LE:128023] [RE:128904] [DI:direct] >gp:[GI:d1009569:g1805372] [LN:D50453] [AC:D50453] [PN:glycine betain-binding protein precursor] [GN:opuAC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:2326] [RE:3207] [DI:direct] >gp:[GI:g984805] [LN:BSU17292] [AC:U17292] [PN:glycine betaine-binding protein precursor] [GN:opuAC] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ATPase (opuAA), transmembrane protein (opuAB) andglycine betaine-binding protein precursor (opuAC) genes, completecds.] [LE:2332] [RE:3213] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25667753_c2_773 1560 5332 564 187 906 7.3e−91 Description sp:[LN:NUSG_STACA] [AC:P36264] [GN:NUSG] [OR:STAPHYLOCOCCUS CARNOSUS] [DE:TRANSCRIPTION ANTITERMINATION PROTEIN NUSG] [SP:P36264] [DB:swissprot] >pir:[LN:S38870] [AC:S38870] [PN:transcription antitermination factor nusG] [GN:nusG] [CL:transcription antitermination factor nusG] [OR:Staphylococcus carnosus] [DB:pir2] >gp:[GI:g426473] [LN:SCSECE] [AC:X76134] [GN:nusG] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:S.carnosus secE, nusG and rplK genes.] [SP:P36264] [LE:331] [RE:879] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_25972086_f1_108 1561 5333 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26173287_c3_970 1562 5334 363 120 103 9.0e−06 Description gp:[GI:e244712:g2764863] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 16] [LE:9322] [RE:9651] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26206687_c1_642 1563 5335 210 69 278 2.6e−24 Description sp:[LN:SECE_STAAU] [AC:O06442] [GN:SECE] [OR:STAPHYLOCOCCUS AUREUS] [DE:PREPROTEIN TRANSLOCASE SECE SUBUNIT] [SP:O06442] [DB:swissprot] >gp:[GI:g2078376] [LN:SAU96619] [AC:U96619] [PN:SecE] [GN:secE] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus NCTC 8325 SecE (secE), NusG (nusG) and RplK(rplK) genes, complete cds.] [LE:31] [RE:213] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26290912_f3_547 1564 5336 882 293 665 2.5e−65 Description pir:[LN:H69759] [AC:H69759] [PN:conserved hypothetical protein yciA] [GN:yciA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182286:g2632620] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yciA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:similar to hypothetical proteins] [LE:169177] [RE:170094] [DI:direct] >gp:[GI:d1009603:g1805406] [LN:D50453] [AC:D50453] [GN:yciA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:43480] [RE:44397] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26306568_c1_724 1565 5337 330 109 83 0.019 Description gp:[GI:g4894306] [LN:AF065404] [AC:AF065404] [PN:pXO1-90] [OR:Bacillus anthracis] [DB:genpept-bct2] [DE:Bacillus anthracis virulence plasmid PX01, complete sequence.] [LE:106772] [RE:108730] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26350125_c2_834 1566 5338 252 83 79 0.041 Description pir:[LN:C69161] [AC:C69161] [PN:sensory transduction histidine kinase] [GN:MTH468] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2621537] [LN:AE000831] [AC:AE000831:AE000666] [PN:sensory transduction histidine kinase] [GN:MTH468] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct1] [DE:Methanobacterium thermoautotrophicum from bases 404817 to 415582(section 37 of 148) of the complete genome.] [NT:Function Code:12.12 - Cell Processes, Broad] [LE:3329] [RE:4993] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26360327_c1_725 1567 5339 552 183 515 2.0e−49 Description pir:[LN:T00186] [AC:T00186] [PN:dUTP pyrophosphatase,] [OR:Staphylococcus aureus phage phi PVL] [EC:3.6.1.23] [DB:pir3] >gp:[GI:d1032887:g3341960] [LN:AB009866] [AC:AB009866] [PN:dUTPase] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 53] [LE:37579] [RE:38106] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26369082_c2_837 1568 5340 252 83 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26375952_c1_714 1569 5341 627 208 223 1.7e−18 Description gp:[GI:e1254413:g2924242] [LN:BTP901456] [AC:Y14232] [PN:hypothetical protein] [OR:Bacteriophage TP901-1] [DB:genpept-phg] [DE:Bacteriophage TP901-1 ORFs 1–12.] [NT:ORF11] [LE:5545] [RE:6168] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26569377_c2_810 1570 5342 639 212 625 4.4e−61 Description sp:[LN:HUMS_BACSU] [AC:P42405:O31477] [GN:YCKG] [OR:BACILLUS SUBTILIS] [EC:4.1.2.-] [DE:3-HEXULOSE 6-PHOSPHATE FORMALDEHYDE LYASE)] [SP:P42405:O31477] [DB:swissprot] >pir:[LN:A69761] [AC:A69761] [PN:D-arabino 3-hexulose 6-phosphate formaldeh homolog yckG] [GN:yckG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182298:g2632632] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yckG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:similar to D-arabino 3-hexulose 6-phosphate] [SP:P42405] [LE:180087] [RE:180719] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26734625_f1_89 1571 5343 351 116 210 4.1e−17 Description gp:[GI:e308969:g2292761] [LN:BSFI21LYS] [AC:X95646] [PN:cI-like repressor] [GN:orf127] [OR:Streptococcus thermophilus bacteriophage Sfi21] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage Sfi21 DNA; lysogenymodule, 8141 bp.] [NT:putative] [LE:5693] [RE:6076] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26772801_f1_91 1572 5344 504 167 168 6.1e−12 Description pir:[LN:A71608] [AC:A71608] [PN:probable integral membrane protein PFB0710c] [GN:PFB0710c] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845257] [LN:AE001413] [AC:AE001413:AE001362] [PN:predicted integral membrane protein] [GN:PFB0710c] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 50 of 73 of thecomplete sequence.] [NT:predicted by GlimmerM] [LE:4351] [RE:5562] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26839638_c1_750 1573 5345 1314 437 1429 2.8e−146 Description sp:[LN:YWFO_BACSU] [AC:P39651] [GN:YWFO:IPA-93D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 51.0 KD PROTEIN IN PTA 3′REGION] [SP:P39651] [DB:swissprot] >pir:[LN:G70056] [AC:G70056:S39748] [PN:ywfO protein:hypothetical protein ipa-93d] [GN:ywfO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186260:g2636296] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywfO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ipa-93d; similar to] [SP:P39651] [LE:59934] [RE:61235] [DI:complement] >gp:[GI:e267329:g1561567] [LN:BSUWFO] [AC:Z80355] [PN:Unknown] [GN:ywfO] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis ywfO, ywgA and ywgB genes.] [SP:P39651] [LE:267] [RE:1568] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_26854757_c3_886 1574 5346 660 219 975 3.6e−98 Description sp:[LN:CYSE_STAXY] [AC:P77985] [GN:CYSE] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:2.3.1.30] [DE:SERINE ACETYLTRANSFERASE, (SAT)] [SP:P77985] [DB:swissprot] >gp:[GI:e261410:g1514656] [LN:SXCYSEREG] [AC:Y07614] [PN:serine O-acetyltransferase] [GN:cysE] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [EC:2.3.1.30] [DE:S.xylosus cysE gene, genomic region.] [SP:P77985] [LE:707] [RE:1357] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_27318_c2_877 1575 5347 1035 344 1198 8.3e−122 Description sp:[LN:ADH1_ZYMMO] [AC:P20368] [GN:ADHA] [OR:ZYMOMONAS MOBILIS] [EC:1.1.1.1] [DE:ALCOHOL DEHYDROGENASE I, (ADH I)] [SP:P20368] [DB:swissprot] >pir:[LN:A35260] [AC:A35260:E40649:A24801] [PN:alcohol dehydrogenase, 1] [GN:adhA] [CL:alcohol dehydrogenase:long-chain alcohol dehydrogenase homology] [OR:Zymomonas mobilis] [EC:1.1.1.1] [DB:pir1] >gp:[GI:g155571] [LN:ZMOADHA] [AC:M32100] [OR:Zymomonas mobilis] [SR:Z.mobilis (strain CP4) DNA] [DB:genpept-bct1] [DE:Z.mobilis alcohol dehydrogenase I (adhA) gene, complete cds.] [NT:alcohol dehydrogenase I (adhA) (EC 1.1.1.1)] [LE:218] [RE:1231] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_276590_c2_821 1576 5348 375 124 279 2.0e−24 Description pir:[LN:H70070] [AC:H70070] [PN:hypothetical protein ywzC] [GN:ywzC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186261:g2636297] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywzC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [LE:61397] [RE:61621] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_2847887_f2_351 1577 5349 576 191 797 2.6e−79 Description sp:[LN:ARSB_STAAU] [AC:P30329] [GN:ARSB] [OR:STAPHYLOCOCCUS AUREUS] [DE:ARSENICAL PUMP MEMBRANE PROTEIN] [SP:P30329] [DB:swissprot] >pir:[LN:C41903] [AC:C41903] [PN:arsenical pump membrane protein] [GN:arsB] [CL:arsenical pump membrane protein] [OR:Staphylococcus aureus] [DB:pir1] >gp:[GI:g150728] [LN:PI2ARSRBC] [AC:M86824] [PN:arsenic efflux pump protein] [GN:arsB] [FN:arsenic efflux pump component (membrane] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 arsenic resistance operon (arsRBC) genes, completecds.] [LE:587] [RE:1876] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_29320127_f3_442 1578 5350 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_29694425_f1_142 1579 5351 852 283 418 3.8e−39 Description gp:[GI:g1502421] [LN:BSU59433] [AC:U59433] [PN:3-ketoacyl-acyl carrier protein reductase] [GN:fabG] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis PlsX (plsX), malonyl-CoA:Acyl carrier proteintransacylase (fabD) and 3-ketoacyl-acyl carrier protein reductase(fabG) genes, complete cds, and acyl carrier protein (acpP) gene,partial cds.] [NT:also called 3-oxoacyl-acyl carrier protein] [LE:1813] [RE:2553] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_30178137_c1_706 1580 5352 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_30267937_f3_532 1581 5353 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_30742332_c2_841 1582 5354 228 75 76 0.012 Description pir:[LN:D71169] [AC:D71169] [PN:hypothetical protein PH0552] [GN:PH0552] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030584:g3256958] [LN:AP000002] [AC:AP000002:AB009475:AB009476:AB009477:AB009478:AB009479:AB009480] [PN:163aa long hypothetical protein] [GN:PH0552] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 287001–544000 nt. position(2/7).] [NT:similar to PIR:F64411 percent identity:33.898 in] [LE:205880] [RE:206371] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_31256916_c2_774 1583 5355 507 168 681 5.1e−67 Description pir:[LN:S38871] [AC:S38871] [PN:ribosomal protein L11] [GN:rplK] [CL:Escherichia coli ribosomal protein L11] [OR:Staphylococcus carnosus] [DB:pir2] >gp:[GI:g581638] [LN:SCSECE] [AC:X76134] [PN:L11 protein] [GN:rplK] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:S.carnosus secE, nusG and rplK genes.] [SP:P36254] [LE:1061] [RE:1483] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_31334838_c3_993 1584 5356 519 172 544 1.7e−52 Description pir:[LN:E70057] [AC:E70057] [PN:hypothetical protein ywhD] [GN:ywhD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e267625:g1565239] [LN:BSTHRZ] [AC:Z80360] [PN:Unknown] [GN:ywhD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis thrZ downstream chromosomal region.] [LE:3358] [RE:3876] [DI:direct] >gp:[GI:e1186252:g2636288] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywhD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [LE:52838] [RE:53356] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3134386_f3_616 1585 5357 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_31353377_c2_785 1586 5358 474 157 703 2.4e−69 Description gp:[GI:d1039003:g4512400] [LN:AB017508] [AC:AB017508] [GN:rpsG] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, completecds.] [NT:rpsG homologue (identity of 84% to B. subtilis)] [LE:8367] [RE:8837] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_31562_f2_326 1587 5359 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_32031437_c1_736 1588 5360 2706 901 1163 4.3e−118 Description sp:[LN:VG12_BPPZA] [AC:P07537] [GN:12] [OR:BACTERIOPHAGE PZA] [DE:PRE-NECK APPENDAGE PROTEIN (LATE PROTEIN GP12)] [SP:P07537] [DB:swissprot] >pir:[LN:WMBP12] [AC:G24831] [PN:gene 12 protein] [GN:12] [CL:phage PZA gene 12 protein] [OR:phage PZA] [DB:pir1] >gp:[GI:g216061] [LN:PZACG] [AC:M11813:M13904:M13905] [PN:pre-neck appendage protein] [OR:Bacteriophage PZA] [SR:Bacteriophage PZA DNA] [DB:genpept-phg] [DE:Bacteriophage PZA (from B.subtilis), complete genome.] [LE:11428] [RE:13992] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_32251_f1_98 1589 5361 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_32315907_f3_595 1590 5362 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_32595152_c1_739 1591 5363 402 133 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3306563_c1_688 1592 5364 366 121 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33235050_f2_235 1593 5365 507 168 92 0.0014 Description pir:[LN:D70063] [AC:D70063] [PN:hypothetical protein ywnA] [GN:ywnA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184569:g2636188] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywnA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:168142] [RE:168543] [DI:complement] >gp:[GI:e269486:g1592697] [LN:BSUEROP] [AC:Y08559] [PN:Unknown] [GN:ywnA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis urease operon and downstream DNA.] [LE:2688] [RE:3089] [DI:direct] >gp:[GI:e1184569:g2636188] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywnA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:168142] [RE:168543] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33394062_f1_179 1594 5366 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33414693_c2_820 1595 5367 1089 362 150 6.9e−16 Description sp:[LN:KIME_METJA] [AC:Q58487] [GN:MJ1087] [OR:METHANOCOCCUS JANNASCHII] [EC:2.7.1.36] [DE:MEVALONATE KINASE, (MK)] [SP:Q58487] [DB:swissprot] >pir:[LN:F64435] [AC:F64435] [PN:mevalonate kinase,] [OR:Methanococcus jannaschii] [EC:2.7.1.36] [DB:pir2] [MP:FOR1026197-1027135] >gp:[GI:g1591731] [LN:U67551] [AC:U67551:L77117] [PN:mevalonate kinase] [GN:MJ1087] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 93 of 150 of the complete genome.] [NT:similar to PID:1184118 SP:Q50559 GB:AE000666] [LE:5625] [RE:6563] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33600035_c1_653 1596 5368 2118 705 3427 0.0 Description gp:[GI:e1422302:g4582216] [LN:SAU237696] [AC:AJ237696] [PN:elongation factor G (EF-G)] [GN:fus] [FN:translation elongation factor] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus fus gene.] [LE:83] [RE:2164] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33756503_c2_830 1597 5369 273 90 265 6.2e−23 Description gp:[GI:e1285113:g3005826] [LN:BPA2INT] [AC:Y12813] [PN:hypothetical protein] [GN:orfB] [OR:Lactobacillus casei bacteriophage A2] [DB:genpept-phg] [DE:Bacteriophage A2 rep, xis and int genes.] [LE:852] [RE:1097] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33786251_c2_865 1598 5370 246 81 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_33869193_c1_726 1599 5371 183 60 130 1.2e−08 Description sp:[LN:RINB_BPPHA] [AC:Q03183] [GN:RINB] [OR:BACTERIOPHAGE PHI-11] [DE:TRANSCRIPTIONAL ACTIVATOR RINB] [SP:Q03183] [DB:swissprot] >pir:[LN:A49703] [AC:A49703] [PN:int gene activator RinB] [OR:phage phi-11] [DB:pir2] >gp:[GI:g166161] [LN:BPHRINAB] [AC:L07580] [PN:Bacteriophage phi-11 int gene activator] [GN:rinB] [FN:Activate bacteriophage phi-11 int gene] [OR:Staphylococcus bacteriophage phi 11] [SR:Bacteriophage phi-11 DNA] [DB:genpept-phg] [DE:Bacteriophage phi-11 rinA and rin B genes, required for theactivation of Staphylococcal phage phi-11 int expression.] [LE:60] [RE:248] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_34025066_c2_856 1600 5372 642 213 89 8.2e−07 Description gp:[GI:e247172:g1926370] [LN:LBPHIG1E] [AC:X98106] [GN:Rorf232] [OR:Bacteriophage phigle] [DB:genpept-phg] [DE:Lactobacillus bacteriophage phigle complete genomic DNA.] [LE:4579] [RE:5277] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_34242202_c3_956 1601 5373 270 89 78 0.017 Description sp:[LN:VP8_VARV] [AC:P33039] [GN:L4R:M4R] [OR:VARIOLA VIRUS] [DE:STRUCTURAL PROTEIN VP8 PRECURSOR (25 KD MAJOR CORE PROTEIN) (P25K)] [SP:P33039] [DB:swissprot] >pir:[LN:A36845] [AC:A36845:533090] [PN:M4R protein:structural protein VP8] [CL:vaccinia virus 28K protein] [OR:variola virus] [DB:pir2] >gp:[GI:g262435] [LN:S55844] [AC:S55844] [PN:glycoprotein VP8] [GN:L4R] [OR:Variola major virus] [SR:Variola major virus India-1967] [DB:genpept-vr1] [DE:G9R . . . H7R [variola major virus, India-1967, Genomic, 19 genes,18029 nt].] [NT:This sequence comes from FIG. 2.] [LE:3187] [RE:3942] [DI:direct] >gp:[GI:g438994] [LN:VARCG] [AC:L22579] [OR:Variola major virus] [SR:Variola major virus (strain Bangladesh-1975) DNA] [DB:genpept-vr1] [DE:Variola major virus (strain Bangladesh-1975) complete genome.] [NT:homolog of vaccinia virus CDS L4R (structural] [LE:70583] [RE:71338] [DI:direct] >gp:[GI:g297256] [LN:VVCGAA] [AC:X69198] [GN:M4R] [OR:Variola virus] [DB:genpept-vr1] [DE:Variola virus DNA complete genome.] [SP:P33039] [LE:69950] [RE:70705] [DI:direct] >gp:[GI:g62352] [LN:VVHINDQKH] [AC:X67119] [PN:structural protein VP8] [GN:L4R COP] [OR:Variola virus] [DB:genpept-vr1] [DE:Variola virus (HindIII-Q,K,H,M,L,I,F genome fragment) genes.] [SP:P33039] [LE:19835] [RE:20590] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_34242202_f1_156 1602 5374 210 69 69 0.047 Description sp:[LN:Y076_MYCPN] [AC:P75555] [OR:MYCOPLASMA PNEUMONIAE] [DE:HYPOTHETICAL PROTEIN MG076 HOMOLOG] [SP:P75555] [DB:swissprot] >pir:[LN:S73943] [AC:S73943] [PN:MG076 homolog G07_orf138] [OR:Mycoplasma pneumoniae] [SR:ATCC 29342, , ATCC 29342] [SR:ATCC 29342,] [DB:pir2] >gp:[GI:g1674320] [LN:MPAE000059] [AC:AE000059:U00089] [GN:G07_orf138] [OR:Mycoplasma pneumoniae] [DB:genpept-bct2] [DE:Mycoplasma pneumoniae section 59 of 63 of the complete genome.] [NT:MG076 homolog, from M. genitalium] [LE:168] [RE:584] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_34407053_f3_433 1603 5375 783 260 564 1.3e−54 Description pir:[LN:S76797] [AC:S76797] [PN:hypothetical protein] [CL:conserved hypothetical protein MJ0165: phosphoribosylaminoimidazole carboxylase catalytic chain homology] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1019442:g1653798] [LN:D90916] [AC:D90916:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 26/27, 3270710–3418851.] [NT:ORF_ID:s111489] [LE:107538] [RE:108377] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_34609703_c3_963 1604 5376 198 65 110 1.6e−06 Description pir:[LN:T00185] [AC:T00185] [PN:hypothetical protein 52] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032886:g3341959] [LN:AB009866] [AC:AB009866] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 52] [LE:37356] [RE:37604] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_34651555_c1_734 1605 5377 3123 1040 267 2.8e−24 Description gp:[GI:e244718:g2764872] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 18] [LE:12264] [RE:13373] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_35162800_c3_885 1606 5378 1506 501 1701 4.2e−175 Description sp:[LN:SYE_BACSU] [AC:P22250] [GN:GLTX] [OR:BACILLUS SUBTILIS] [EC:6.1.1.17] [DE:(GLURS)] [SP:P22250] [DB:swissprot] >pir:[LN:SYBSET] [AC:A36090:S66121:E69635] [PN:glutamate--tRNA ligase, gltX:glutamyl-tRNA synthetase gltX] [GN:gltX] [CL:glutamate--tRNA ligase:glutamine--tRNA ligase homology] [OR:Bacillus subtilis] [EC:6.1.1.17] [DB:pir1] >gp:[GI:d1005868:g467480] [LN:BAC180K] [AC:D26185] [PN:glutamyl-tRNA synthetase] [GN:gltX] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:174646] [RE:176097] [DI:direct] >gp:[GI:g143006] [LN:BACGLTXA] [AC:M55073:J05647] [PN:transfer RNA-Gln synthetase] [GN:gltX] [OR:Bacillus subtilis] [SR:Bacillus subtilis 168T DNA] [DB:genpept-bct1] [EC:6.1.1.17] [DE:Bacillus subtilis glutamyl-tRNA synthetase gene, complete cds.] [LE:1] [RE:1452] [DI:direct] >gp:[GI:g289282] [LN:BACGLUSYN] [AC:L14580] [PN:glutamyl-tRNA synthetase] [GN:gltX] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168T) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis glutamyl-tRNA transferase (gltX), serineacetyltransferase (cysE), and cysteinyl-tRNA synthetase (cysS)genes, complete cds's.] [LE:1706] [RE:3157] [DI:direct] >gp:[GI:e1182025:g2632359] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:glutamyl-tRNA synthetase] [GN:gltX] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.17] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [SP:P22250] [LE:111044] [RE:112495] [DI:direct] >gp:[GI:g2653659] [LN:U49789] [AC:U49789] [PN:glutamyl-tRNA synthetase] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis glutamyl-tRNA synthetase gene, complete cds.] [LE:1] [RE:1452] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_35350062_f2_317 1607 5379 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_35445875_c1_728 1608 5380 159 52 53 0.016 Description pir:[LN:C70306] [AC:C70306] [PN:conserved hypothetical protein aq_064c] [GN:aq_064c] [CL:conserved hypothetical secreted protein HP0320] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2982828] [LN:AE000672] [AC:AE000672:AE000657] [PN:hypothetical protein] [GN:aq_064c] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 4 of 109 of the complete genome.] [LE:2190] [RE:2423] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_36054813_c2_833 1609 5381 387 128 79 0.034 Description pir:[LN:S41186] [AC:S43812:S41186] [PN:gene 39 protein] [OR:phage SPP1] [DB:pir2] >gp:[GI:e244746:g2764918] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 39] [LE:36342] [RE:36722] [DI:direct] >gp:[GI:g439643] [LN:BSSPP1] [AC:X67865] [GN:39] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:B.subtilis phage SPP1 DNA sequence coding for products required forreplication initiation.] [LE:6073] [RE:6453] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_36134715_c3_887 1610 5382 771 256 666 2.0e−65 Description sp:[LN:YACO_BACSU] [AC:Q06753] [GN:YACO] [OR:BACILLUS SUBTILIS] [EC:2.1.1.-] [DE:HYPOTHETICAL TRNA/RRNA METHYLTRANSFERASE YACO,] [SP:Q06753] [DB:swissprot] >pir:[LN:S66124] [AC:S66124:G69741:I40000] [PN:conserved hypothetical protein yacO] [GN:yacO] [CL:conserved hypothetical protein HI0860] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005871:g467483] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:178868] [RE:179617] [DI:direct] >gp:[GI:e1182029:g2632363] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yacO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to hypothetical proteins] [SP:Q06753] [LE:115266] [RE:116015] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_36228563_c3_960 1611 5383 699 232 110 0.00063 Description gp:[GI:g2865254] [LN:AF008237] [AC:AF008237:L28928:L28929:L28930:L28931] [PN:unknown] [OR:Mitochondrion Chlamydomonas eugametos] [SR:Chlamydomonas eugametos] [DB:genpept-pln2] [DE:Chlamydomonas eugametos mitochondrion, complete genome.] [NT:orf306; intronic ORF; formerly i3; in frame with] [LE:<8260] [RE:9180] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_36521067_f3_540 1612 5384 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3908462_c1_703 1613 5385 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3909643_f2_217 1614 5386 1197 398 719 4.8e−71 Description gp:[GI:g4981502] [LN:AE001759] [AC:AE001759:AE000512] [PN:conserved hypothetical protein] [GN:TM0964] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 71 of 136 of the complete genome.] [NT:similar to GP:2622211 percent identity: 60.38;] [LE:5733] [RE:6941] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3912503_c1_698 1615 5387 1500 499 331 1.5e−28 Description pir:[LN:E69825] [AC:E69825] [PN:amino acid transporter homolog yhdG] [GN:yhdG] [CL:arginine permease] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182947:g2633281] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to amino acid transporter] [LE:23330] [RE:24727] [DI:direct] >gp:[GI:e325026:g2226202] [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees: spoVRto sspB.] [NT:Similarity to human retroviral receptor (PIR] [LE:9978] [RE:11375] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3945333_c2_782 1616 5388 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_3961590_c3_922 1617 5389 1164 387 669 9.5e−66 Description pir:[LN:H69831] [AC:H69831] [PN:acetyl-CoA C-acetyltransferase homolog yhfS] [GN:yhfS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183037:g2633371] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhfS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to acetyl-CoA C-acetyltransferase] [LE:109360] [RE:110454] [DI:complement] >gp:[GI:e324998:g2226255] [LN:BSY14084] [AC:Y14084] [PN:hypothetical protein] [GN:yhfS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis chromosomal DNA, region 78–80 degrees: aprE to comK.] [NT:similarity to acetyl-CoAuacetyltransferases (ThiL,] [LE:3788] [RE:4882] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_39635_f2_316 1618 5390 1245 414 972 7.4e−98 Description sp:[LN:YKGC_ECOLI] [AC:P77212] [GN:YKGC] [OR:ESCHERICHIA COLI] [DE:INTERGENIC REGION] [SP:P77212] [DB:swissprot] >pir:[LN:H64756] [AC:H64756] [PN:probable mercury(II) reductase,:ykgC protein] [GN:ykgC] [OR:Escherichia coli] [EC:1.16.1.1] [DB:pir2] >gp:[GI:g1657503] [LN:ECU73857] [AC:U73857] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli chromosome minutes 6–8.] [NT:similar to S. aureus mercury(II) reductase] [LE:26473] [RE:27825] [DI:complement] >gp:[GI:g1786495] [LN:AE000137] [AC:AE000137:U00096] [PN:putative oxidoreductase] [GN:ykgC] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 27 of 400 of the completegenome.] [NT:f450; 35 pct identical (29 gaps) to 430 residues of] [LE:6292] [RE:7644] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4031952_c2_775 1619 5391 501 166 545 1.3e−52 Description pir:[LN:D69695] [AC:D69695] [PN:ribosomal protein L10 (BL5) rplJ] [GN:rplJ] [CL:Escherichia coli ribosomal protein L10] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1009473:g786163] [LN:BACRPL2] [AC:D50303] [PN:Ribosomal Protein L10] [GN:rplJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L1, L10 and L12,partial and complete cds.] [LE:347] [RE:847] [DI:direct] >gp:[GI:e1182037:g2632371] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L10 (BL5)] [GN:rplJ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [SP:P42923] [LE:120057] [RE:120557] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_40676_c1_644 1620 5392 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4078305_c3_927 1621 5393 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4078375_f1_6 1622 5394 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4078518_f1_143 1623 5395 843 280 521 4.6e−50 Description sp:[LN:YXEK_BACSU] [AC:P54950] [GN:YXEK:LP9C] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 49.3 KD PROTEIN IN IDH-DEOR INTERGENIC REGION] [SP:P54950] [DB:swissprot] >pir:[LN:E70075] [AC:E70075] [PN:monooxygenase homolog yxeK] [GN:yxeK] [CL:nitrilotriacetate monooxygenase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184677:g2636498] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxeK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281to 4214814.] [NT:similar to monooxygenase] [SP:P54950] [LE:60328] [RE:61653] [DI:complement] >gp:[GI:d1008923:g1408496] [LN:D45912] [AC:D45912] [GN:yxeK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1 (Marburg 168; trpC2)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence between the iol and hut operon,partial and complete cds.] [NT:homologous to dszA gene product of Rhodococcus sp.] [LE:9823] [RE:11148] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4181527_c1_720 1624 5396 447 148 93 0.0045 Description sp:[LN:V17_BPT7] [AC:P03781] [GN:1.7] [OR:BACTERIOPHAGE T7] [DE:GENE 1.7 PROTEIN] [SP:P03781] [DB:swissprot] >pir:[LN:W1BP77] [AC:G43002:G43004:S42296:A04406] [PN:gene 1.7 protein] [GN:1.7] [CL:phage T7 gene 1.7 protein] [OR:phage T7] [DB:pir1] [MP:20.42–21.89] >gp:[GI:g15512] [LN:PET7XX] [AC:V01127] [OR:Bacteriophage T7] [DB:genpept-phg] [DE:Left end of bacteriophage T7 genome. Includes the reading frames ofthe genes 0.3, 0.4, 0.5, 0.6, 0.65, 0.7, 1, 1.1, 1.2, 1.3 (earlyproteins) and 1.4, 1.5, 1.6, 1.7, 2, 2.5, 2.8, 3, 3.5, 4A and 4B(late proteins). Gene 1 is the T7 RNA polymerase.] [NT:1.7 protein] [SP:P03781] [LE:8166] [RE:8756] [DI:direct] >gp:[GI:g15576] [LN:T7CG] [AC:V01146:J02518:X00411] [OR:Bacteriophage T7] [DB:genpept-phg] [DE:Genome of bacteriophage T7.] [NT:gene 1.7] [SP:P03781] [LE:8166] [RE:8756] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4181577_c3_955 1625 5397 1251 416 465 3.9e−44 Description pir:[LN:H70427] [AC:H70427] [PN:replicative DNA helicase] [GN:dnaB] [CL:phage P22 gene 12 protein] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983861] [LN:AE000742] [AC:AE000742:AE000657] [PN:replicative DNA helicase] [GN:dnaB] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 74 of 109 of the complete genome.] [LE:2249] [RE:3655] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4329063_c3_900 1626 5398 1245 414 1786 4.1e−184 Description gp:[GI:d1039005:g4512402] [LN:AB017508] [AC:AB017508] [GN:tufA] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, completecds.] [NT:tufA homologue (identity of 91% to B. subtilis)] [LE:11150] [RE:12340] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4334510_c2_822 1627 5399 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4398453_f3_561 1628 5400 477 158 279 4.5e−24 Description sp:[LN:NTAA_CHEHE] [AC:P54989] [GN:NTAA:NMOA] [OR:CHELATOBACTER HEINTZII] [EC:1.14.13.-] [DE:MONOOXYGENASE COMPONENT A) (NTA-MO A)] [SP:P54989] [DB:swissprot] >gp:[GI:g1119211] [LN:CBYNMOB] [AC:L49438] [GN:nmoA] [FN:component A of NTA monooxygenase] [OR:Chelatobacter heintzii] [DB:genpept-bct1] [DE:Chelatobacter heintzii NTA monooxygenase component B (nmoB), NTAmonooxygenase component A (nmoA), regulatory protein (nmoR) andtransposase (nmoT) genes, complete cds.] [LE:1323] [RE:2684] [DI:direct] >gp:[GI:g1480205] [LN:CHU39411] [AC:U39411] [PN:NTA monooxygenase component A] [GN:ntaA] [OR:Chelatobacter heintzii] [SR:Chelatobacter heintzii strain=ATCC 29600] [DB:genpept-bct1] [DE:Chelatobacter heintzii nitrilotriacetate monooxygenase genes,putative regulatory protein (ntaR), NTA monooxygenase component A(ntaA) and component B (ntaB) genes, complete cds.] [LE:1123] [RE:2484] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_446062_c1_748 1629 5401 690 229 1165 2.6e−118 Description sp:[LN:TRA2_STAAU] [AC:P19380] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE-LIKE ELEMENT IS431MEC] [SP:P19380] [DB:swissprot] >pir:[LN:S12093] [AC:S12093:JU0116] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46602] [LN:SAIS431M] [AC:X53818:M18438] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus IS431mec gene associated with methicillin resistance.] [NT:putative transposase (AA 1–224)] [SP:P19380] [LE:272] [RE:946] [DI:direct] >gp:[GI:e1237900:g2791991] [LN:SAMECAR1I] [AC:Y14051] [PN:putative transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus mecA, mecR1, mecI genes and ORF168, ORF142,ORF44, ORF145 and ORF224.] [NT:ORF224] [LE:8096] [RE:8770] [DI:direct] >gp:[GI:d1046034:g5360858] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N062] [LE:48054] [RE:48728] [DI:direct] >gp:[GI:d1046044:g5360868] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N070] [LE:53400] [RE:54074] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4725006_c3_981 1630 5402 537 178 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4727203_c3_925 1631 5403 369 122 86 0.032 Description gp:[GI:d1004088:g505029] [LN:MUSMNS1] [AC:D14849] [PN:meiosis-specific nuclear structural protein 1] [OR:Mus musculus] [SR:Mus mucsulus (strain ddY) testis pachytene spermatocyte cDNA t] [DB:genpept-rod] [DE:Mouse mRNA for meiosis-specific nuclear structural protein 1(MNS1), complete cds.] [LE:180] [RE:1655] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4735833_f2_359 1632 5404 711 236 464 5.0e−44 Description sp:[LN:YAAG_BACSU] [AC:P37530] [GN:YAAG] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 24.1 KD PROTEIN IN SERS-DNAZ INTERGENIC REGION] [SP:P37530] [DB:swissprot] >pir:[LN:S66045] [AC:S66045:G69736] [PN:deoxypurine kinase subunit homolog yaaG] [GN:yaaG] [CL:Lactobacillus acidophilus deoxyadenosine kinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005793:g467405] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:86746] [RE:87369] [DI:complement] >gp:[GI:e1181948:g2632282] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to deoxypurine kinase subunit] [SP:P37530] [LE:23144] [RE:23767] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4741068_c3_967 1633 5405 609 202 210 4.1e−17 Description gp:[GI:e247154:g1926352] [LN:LBPHIG1E] [AC:X98106] [PN:minor capsid protein] [GN:Rorf204] [OR:Bacteriophage phigle] [DB:genpept-phg] [DE:Lactobacillus bacteriophage phigle complete genomic DNA.] [LE:24554] [RE:25168] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4741077_c3_952 1634 5406 687 228 238 4.5e−20 Description gp:[GI:e247139:g1926334] [LN:LBPHIG1E] [AC:X98106] [GN:Rorf242] [OR:Bacteriophage phigle] [DB:genpept-phg] [DE:Lactobacillus bacteriophage phigle complete genomic DNA.] [LE:37600] [RE:38328] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4876967_c3_913 1635 5407 579 192 168 1.2e−12 Description pir:[LN:G69824] [AC:G69824] [PN:conserved hypothetical protein yhdA] [GN:yhdA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182923:g2633257] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhdA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:similar to hypothetical proteins] [LE:207082] [RE:207606] [DI:direct] >gp:[GI:e1182935:g2633269] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to hypothetical proteins] [LE:10402] [RE:10926] [DI:direct] >gp:[GI:e324946:g2226142] [LN:BSY14079] [AC:Y14079] [PN:hypothetical protein] [GN:yhdA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees: glpPFKDoperon and downstream.] [NT:similarity to the hypothetical protein YIEF from] [LE:10050] [RE:10574] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4882760_c3_1001 1636 5408 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4886075_f3_559 1637 5409 678 225 794 5.4e−79 Description sp:[LN:YAAF_BACSU] [AC:P37529] [GN:YAAF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 25.4 KD PROTEIN IN SERS-DNAZ INTERGENIC REGION] [SP:P37529] [DB:swissprot] >pir:[LN:S66044] [AC:S66044:F69736] [PN:deoxypurine kinase subunit homolog yaaF] [GN:yaaF] [CL:Lactobacillus acidophilus deoxyadenosine kinase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005792:g467404] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:86096] [RE:86749] [DI:complement] >gp:[GI:e1181947:g2632281] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to deoxypurine kinase subunit] [SP:P37529] [LE:22494] [RE:23147] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4892127_c1_746 1638 5410 2706 901 1557 7.6e−160 Description pir:[LN:H69780] [AC:H69780] [PN:antibiotic transport-associated protein homolog ydfJ] [GN:ydfJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020130:g1881350] [LN:AB001488] [AC:AB001488] [GN:ydfJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:PROBABLE TRANSPORT PROTEIN, SIMILAR TO ANTIBIOTIC] [LE:122935] [RE:125109] [DI:direct] >gp:[GI:e1182509:g2632843] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydfJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [NT:similar to antibiotic transport-associated protein] [LE:186681] [RE:188855] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4901703_c2_792 1639 5411 510 169 95 0.0031 Description pir:[LN:D69887] [AC:D69887] [PN:conserved hypothetical protein ynaD] [GN:ynaD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1750115] [LN:BSU66480] [AC:U66480] [PN:YnaD] [GN:ynaD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis SpoVK (spoVK), YnbA (ynbA), YnbB (ynbB), GlnR(glnR), glutamine synthetase (glnA), YnaA (ynaA), YnaB (ynaB), YnaC(ynaC), YnaD (ynaD), YnaE (ynaE), YnaF (ynaF), YnaG (ynaG), YnaH(ynaH), YnaI (ynaI), YnaJ (ynaJ), xylan beta-1,4-xylosidase (xynB),xylose repressor (xylR), xylose isomerase (xylA), xylulose kinase(xylB), YncB (yncB), YncC (yncC), YncD (yncD) and YncE (yncE)genes, complete cds.] [LE:9169] [RE:9681] [DI:direct] >gp:[GI:e1183411:g2634136] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ynaD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201to 2014980.] [NT:similar to hypothetical proteins] [LE:101220] [RE:101732] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4946962_c3_907 1640 5412 1068 355 183 1.0e−11 Description gp:[GI:g3264834] [LN:AF072541] [AC:AF072541] [PN:xylitol dehydrogenase] [GN:xdh] [FN:xylose utilisation] [OR:Galactocandida mastotermitis] [DB:genpept-pln2] [EC:1.1.1.9] [DE:Galactocandida mastotermitis xylitol dehydrogenase (xdh) gene,complete cds.] [NT:a member of the medium chain dehydrogenase] [LE:301:373] [RE:312:1422] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_4964677_c2_832 1641 5413 444 147 257 4.3e−22 Description pir:[LN:T00179] [AC:T00179] [PN:ssDNA-binding protein] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032880:g3341953] [LN:AB009866] [AC:AB009866] [PN:ssDNA binding protein] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 45] [LE:34657] [RE:35127] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_5080092_c2_809 1642 5414 744 247 529 6.5e−51 Description sp:[LN:YBFT_BACSU] [AC:O31458] [GN:YBFT] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 27.3 KD PROTEIN IN GLTP-CWLJ INTERGENIC REGION] [SP:O31458] [DB:swissprot] >pir:[LN:E69750] [AC:E69750] [PN:glucosamine-6-phosphate isomerase homolog ybfT] [GN:ybfT] [CL:glucosamine-6-phosphate isomerase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1034099:g3599658] [LN:AB006424] [AC:AB006424] [GN:ybfT] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23degree.] [LE:59813] [RE:60562] [DI:complement] >gp:[GI:e1182188:g2632522] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ybfT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:similar to glucosamine-6-phosphate isomerase] [SP:O31458] [LE:62162] [RE:62911] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_5125076_f3_531 1643 5415 810 269 873 2.3e−87 Description sp:[LN:YWFI_BACSU] [AC:P39645] [GN:YWFI:IPA-87R] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 29.5 KD PROTEIN IN ROCC-PTA INTERGENIC REGION] [SP:P39645] [DB:swissprot] >pir:[LN:S39742] [AC:S39742:B70056] [PN:ywfI protein:hypothetical protein ipa-87r] [GN:ywfI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g414011] [LN:BSGENR] [AC:X73124] [GN:ipa-87r] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic region (325 to 333).] [SP:P39645] [LE:90200] [RE:90964] [DI:complement] >gp:[GI:e1186267:g2636303] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywfI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ipa-87r; similar to] [SP:P39645] [LE:66995] [RE:67759] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_5251588_c1_747 1644 5416 582 193 87 0.0010 Description gp:[GI:g1079814] [LN:S79230] [AC:S79230] [PN:BM1P1] [GN:CYP106] [OR:Bacillus megaterium] [DB:genpept-bct2] [DE:CYP106=BM1P2 orf . . . CYP106=P450BM-1 orf {regulatory regions}[Bacillus megaterium, mRNA Partial, 3 genes, 1400 nt].] [NT:positive transcription factor involved in] [LE:763] [RE:1059] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_5258515_c3_965 1645 5417 1314 437 1298 2.1e−132 Description sp:[LN:TERL_BPSPP] [AC:P54308] [GN:2] [OR:BACTERIOPHAGE SPP1] [DE:TERMINASE LARGE SUBUNIT (G2P)] [SP:P54308] [DB:swissprot] >pir:[LN:S24451] [AC:S24451] [PN:terminase] [OR:phage SPP1] [DB:pir2] >gp:[GI:e244468:g2764840] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 2] [SP:P54308] [LE:307] [RE:1575] [DI:direct] >gp:[GI:g15466] [LN:NCSPP116] [AC:X56064:S35313] [PN:terminase] [GN:SPP1 gene 2] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:B. subtilis bacteriophage SPP1 genes for terminase and portalprotein.] [SP:P54308] [LE:633] [RE:1901] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_5370450_f3_432 1646 5418 1284 427 305 3.6e−27 Description pir:[LN:A69256] [AC:A69256] [PN:hypothetical protein AF0049] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2650605] [LN:AE001103] [AC:AE001103:AE000782] [PN:A. fulgidus predicted coding region AF0049] [GN:AF0049] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 4 of 172 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:7830] [RE:9068] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_56626_c2_855 1647 5419 336 111 84 0.0020 Description gp:[GI:g1209829] [LN:BBU45421] [AC:U45421] [GN:REP+] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete strain=297] [DB:genpept-bct1] [DE:Borrelia burgdorferi 2.9-1 locus, ORF 5–8, ORF-A-D, REP+, REP−, andlipoprotein (LP) genes, complete cds.] [NT:repeat motif-containing gene] [LE:4602] [RE:5156] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_587811_f1_125 1648 5420 345 114 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6056625_c1_755 1649 5421 258 85 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6149152_c3_884 1650 5422 1389 462 1543 2.3e−158 Description sp:[LN:RADA_BACSU] [AC:P37572] [GN:RADA:SMS] [OR:BACILLUS SUBTILIS] [DE:DNA REPAIR PROTEIN RADA HOMOLOG (DNA REPAIR PROTEIN SMS HOMOLOG)] [SP:P37572] [DB:swissprot] >pir:[LN:S66116] [AC:S66116:I40509:A69709] [PN:DNA repair protein homolog sms] [GN:sms] [CL:DNA repair protein sms] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005863:g467475] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:169695] [RE:171071] [DI:direct] >gp:[GI:e1182020:g2632354] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:DNA repair protein homolog] [GN:sms] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: yacJ] [SP:P37572] [LE:106093] [RE:107469] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6250050_f2_233 1651 5423 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6406337_f3_448 1652 5424 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6407136_c2_840 1653 5425 1455 484 667 1.6e−65 Description sp:[LN:SIZ_BPSPP] [AC:P54309] [GN:6:SIZ] [OR:BACTERIOPHAGE SPP1] [DE:PORTAL PROTEIN (PORTAL VERTEX PROTEIN) (GP6)] [SP:P54309] [DB:swissprot] >pir:[LN:S21805] [AC:S21805:S24455:S36725] [PN:portal protein:gene 6 protein] [GN:6] [OR:phage SPP1] [DB:pir2] >gp:[GI:e244702:g2764847] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 6] [SP:P54309] [LE:2334] [RE:3845] [DI:direct] >gp:[GI:g15470] [LN:NCSPP116] [AC:X56064:S35313] [PN:portal protein] [GN:SPP1 gene 6] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:B. subtilis bacteriophage SPP1 genes for terminase and portalprotein.] [SP:P54309] [LE:2660] [RE:4171] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6443763_c2_769 1654 5426 408 135 298 2.0e−26 Description pir:[LN:C69742] [AC:C69742] [PN:conserved hypothetical protein yazC] [GN:yazC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182028:g2632362] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yazC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to hypothetical proteins] [LE:114851] [RE:115282] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_661062_c1_641 1655 5427 1440 479 1568 5.2e−161 Description sp:[LN:SYC_BACSU] [AC:Q06752] [GN:CYSS:SPNA] [OR:BACILLUS SUBTILIS] [EC:6.1.1.16] [DE:(CYSRS)] [SP:Q06752] [DB:swissprot] >pir:[LN:C53402] [AC:C53402:S44447:S66123:B69612] [PN:cysteine--tRNA ligase, cysS:cysteinyl-tRNA synthetase cysS] [GN:cysS] [CL:cysteine--tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.16] [DB:pir1] >gp:[GI:d1005870:g467482] [LN:BAC180K] [AC:D26185] [PN:cysteinyl-tRNA synthetase] [GN:cysS] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:177049] [RE:178449] [DI:direct] >gp:[GI:g289284] [LN:BACGLUSYN] [AC:L14580] [PN:cysteinyl-tRNA synthetase] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168T) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis glutamyl-tRNA transferase (gltX), serineacetyltransferase (cysE), and cysteinyl-tRNA synthetase (cysS)genes, complete cds's.] [LE:4109] [RE:5509] [DI:direct] >gp:[GI:g499303] [LN:BSCTS] [AC:X73989] [PN:cysteine--tRNA ligase] [GN:SPNA/CYSS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.16] [DE:B.subtilis gene for cysteinyl-tRNA synthetase.] [SP:Q06752] [LE:321] [RE:1721] [DI:direct] >gp:[GI:e1182027:g2632361] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:cysteinyl-tRNA synthetase] [GN:cysS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.16] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: snpA] [SP:Q06752] [LE:113447] [RE:114847] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6725707_c2_770 1656 5428 552 183 327 1.7e−29 Description sp:[LN:YACP_BACSU] [AC:P37574] [GN:YACP] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 19.7 KD PROTEIN IN CYSS 3′REGION] [SP:P37574] [DB:swissprot] >pir:[LN:S66125] [AC:S66125:H69741] [PN:conserved hypothetical protein yacP] [GN:yacP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005872:g467484] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:179624] [RE:180136] [DI:direct] >gp:[GI:e1182030:g2632364] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yacP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to hypothetical proteins] [SP:P37574] [LE:116022] [RE:116534] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6757338_c3_906 1657 5429 1089 362 1129 1.7e−114 Description pir:[LN:H69750] [AC:H69750] [PN:branched-chain amino acid aminotransferase homolog ybgE] [GN:ybgE] [CL:branched-chain-amino-acid transaminase BAT1] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1034103:g3599662] [LN:AB006424] [AC:AB006424] [GN:ybgE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23degree.] [LE:62005] [RE:63075] [DI:direct] >gp:[GI:e1182191:g2632525] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ybgE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:similar to branched-chain amino acid] [LE:64355] [RE:65425] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_6932750_f2_348 1658 5430 378 125 266 4.8e−23 Description pir:[LN:C69906] [AC:C69906] [PN:hypothetical protein yojF] [GN:yojF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185419:g2634340] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yojF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [LE:121397] [RE:121747] [DI:complement] >gp:[GI:g3169322] [LN:AF026147] [AC:AF026147] [PN:YojF] [GN:yojF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis YojA (yojA), YojB (yojB), YojC (yojC), YojD(yojD), YojE (yojE), YojF (yojF), YojG (yojG), YojH (yojH), YojI(yojI), YojJ (yojJ), YojK (yojK), YojL (yojL), YojM (yojM), YojN(yojN), and YojO (yojO) genes, complete cds; and OdhA (odhA) gene,partial cds.] [LE:3518] [RE:3868] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_7032188_f2_246 1659 5431 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_7068751_c3_984 1660 5432 945 314 974 4.6e−98 Description sp:[LN:IOLS_BACSU] [AC:P46336] [GN:IOLS:SS92ER] [OR:BACILLUS SUBTILIS] [DE:IOLS PROTEIN (VEGETATIVE PROTEIN 147) (VEG147)] [SP:P46336] [DB:swissprot] >pir:[LN:D69646] [AC:D69646] [PN:myo-inositol catabolism iolS] [GN:iolS] [CL:conserved hypothetical protein YPL088w] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1022457:g904205] [LN:AB005554] [AC:AB005554:D45242:D31629] [GN:iolS] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 36 kb region between gnt and ioloperons.] [NT:plausibly involved in inositol catabolism] [LE:32539] [RE:33471] [DI:complement] >gp:[GI:e1184703:g2636524] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:iolS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281to 4214814.] [NT:alternate gene name: yxbF; myo-inositol catabolism] [SP:P46336] [LE:85121] [RE:86053] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_7160287_c2_805 1661 5433 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_7164191_c2_798 1662 5434 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_7229680_c1_634 1663 5435 492 163 377 8.3e−35 Description sp:[LN:CTSR_BACSU] [AC:P37568] [GN:CTSR] [OR:BACILLUS SUBTILIS] [DE:TRANSCRIPTIONAL REGULATOR CTSR] [SP:P37568] [DB:swissprot] >pir:[LN:S66112] [AC:S66112:D69610] [PN:transcription repressor of class III stress genes ctsR] [GN:ctsR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005859:g467471] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:165048] [RE:165512] [DI:direct] >gp:[GI:e1182016:g2632350] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:transcriptional regulator] [GN:ctsR] [FN:negative regulation of class III stress genes] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: yacG] [SP:P37568] [LE:101446] [RE:101910] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_7275263_c1_733 1664 5436 441 146 158 1.3e−11 Description gp:[GI:e244713:g2764865] [LN:BSPP1GENM] [AC:X97918] [OR:Bacteriophage SPP1] [DB:genpept-phg] [DE:Bacteriophage SPP1 complete nucleotide sequence.] [NT:gene 17] [LE:10063] [RE:10467] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_782590_f1_114 1665 5437 171 56 56 0.044 Description gp:[GI:e289995:g1764015] [LN:CICOS41] [AC:Z83760] [PN:COS41.5] [OR:Ciona intestinalis] [DB:genpept-inv1] [DE:Ciona intestinalis DNA sequence from cosmid COS41.] [NT:weak similarity to membrane transport proteins] [LE:11497:13519:14634] [RE:13190:13703:14681] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_783425_c1_675 1666 5438 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_818942_c3_989 1667 5439 477 158 173 3.4e−17 Description sp:[LN:OPUC_BACSU] [AC:P46922] [GN:OPUAC] [OR:BACILLUS SUBTILIS] [DE:GLYCINE BETAINE-BINDING PROTEIN PRECURSOR] [SP:P46922] [DB:swissprot] >pir:[LN:I40537] [AC:I40537:F69669] [PN:glycine betaine ABC transporter (glycine betaine-binding protein) opuAC precursor] [GN:opuAC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182252:g2632586] [LN:BSUB0002] [AC:Z99105:AL009126] [PN:glycine betaine ABC transporter (glycine] [GN:opuAC] [FN:glycine betaine transport (osmoprotection)] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [SP:P46922] [LE:128023] [RE:128904] [DI:direct] >gp:[GI:d1009569:g1805372] [LN:D50453] [AC:D50453] [PN:glycine betain-binding protein precursor] [GN:opuAC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:2326] [RE:3207] [DI:direct] >gp:[GI:g984805] [LN:BSU17292] [AC:U17292] [PN:glycine betaine-binding protein precursor] [GN:opuAC] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ATPase (opuAA), transmembrane protein (opuAB) andglycine betaine-binding protein precursor (opuAC) genes, completecds.] [LE:2332] [RE:3213] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_819575_c2_850 1668 5440 1857 618 158 1.4e−08 Description gp:[GI:e247163:g1926361] [LN:LBPHIG1E] [AC:X98106] [GN:Rorf372] [OR:Bacteriophage phigle] [DB:genpept-phg] [DE:Lactobacillus bacteriophage phigle complete genomic DNA.] [LE:13476] [RE:14594] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_821012_c1_664 1669 5441 1725 574 469 6.8e−44 Description pir:[LN:S49240] [AC:S49240] [PN:hypothetical protein 3 (capsulation locus)] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g547513] [LN:HIACAPIID] [AC:Z37516] [OR:Haemophilus influenzae] [DB:genpept-bct1] [DE:Haemophilus influenzae serotype a capsulation locus region II DNA.] [NT:orf3] [LE:2838] [RE:5207] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_833125_f3_493 1670 5442 285 94 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_892842_c3_926 1671 5443 387 128 337 1.4e−30 Description sp:[LN:YWDK_BACSU] [AC:P39619] [GN:YWDK:IPA-61D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 12.0 KD PROTEIN IN UNG-ROCA INTERGENIC REGION] [SP:P39619] [DB:swissprot] >pir:[LN:S39716] [AC:S39716:F70054] [PN:ywdK protein:hypothetical protein ipa-61d] [GN:ywdK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413985] [LN:BSGENR] [AC:X73124] [GN:ipa-61d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genomic region (325 to 333).] [SP:P39619] [LE:63169] [RE:63510] [DI:direct] >gp:[GI:e1186292:g2636328] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywdK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401to 4010550.] [NT:alternate gene name: ipa-61d; similar to] [SP:P39619] [LE:94452] [RE:94793] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_972187_f2_208 1672 5444 924 307 834 3.1e−83 Description gp:[GI:g2689564] [LN:U93688] [AC:U93688] [PN:integrase] [GN:int] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst),enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:similar to staphylococcal phage integrase] [LE:13871] [RE:15091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_9765677_c3_949 1673 5445 804 267 226 8.4e−19 Description gp:[GI:g928839] [LN:BK5TATTP] [AC:L44593] [FN:unidentified] [OR:Lactococcus lactis phage BK5-T] [SR:Bacteriophage BK5-T DNA] [DB:genpept-phg] [DE:Bacteriophage BK5-T ORF′410, 3′ end pf cds, 20 ORFs, repressorprotein, and Cro repressor protein genes, complete cds, ORF70′gene, 5′ end of cds.] [NT:ORF266; putative] [LE:14882] [RE:15682] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_977181_c1_702 1674 5446 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_978377_c1_689 1675 5447 264 87 75 0.0037 Description sp:[LN:VG05_VACCC] [AC:P21026] [GN:G5R] [OR:VACCINIA VIRUS] [SR:COPENHAGEN,] [DE:PROTEIN G5] [SP:P21026] [DB:swissprot] >pir:[LN:A42512] [AC:A42512] [PN:GSR protein] [OR:vaccinia virus] [DB:pir2] >gp:[GI:g335417] [LN:VACCG] [AC:M35027] [OR:Vaccinia virus] [SR:Vaccinia virus (strain Copenhagen) DNA, clone VC-2] [DB:genpept-vr1] [DE:Vaccinia virus, complete genome.] [NT:G5R; putative] [LE:75218] [RE:76522] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_9819392_c3_908 1676 5448 789 262 179 6.4e−13 Description gp:[GI:g1463023] [LN:CELF45E1] [AC:U28732] [GN:F45E1.3] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain=Bristol N2] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F45E1.] [LE:13873:15298:15662:15851] [RE:14009:15615:15806:16024] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_9924055_c2_765 1677 5449 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_9926903_c2_835 1678 5450 309 102 79 0.0032 Description pir:[LN:F45681] [AC:F45681] [PN:orf 61.2] [OR:phage T2] [DB:pir2] >gp:[GI:g298525] [LN:S57515] [AC:S57515] [GN:orf 61.2] [OR:coliphage T2] [DB:genpept-phg] [DE:orf 61.2 {intergenic region between 41 and 61} [bacteriophage T2,Genomic, 323 nt].] [NT:This sequence comes from FIG. A3.] [LE:12] [RE:323] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000987_994052_c3_979 1679 5451 1536 511 130 0.00012 Description gp:[GI:g4049717] [LN:AF063866] [AC:AF063866] [PN:ORF MSV156 hypothetical protein] [GN:MSV156] [OR:Melanoplus sanguinipes entomopoxvirus] [DB:genpept-vr1] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:140126] [RE:143509] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_22939705_c3_35 1680 5452 402 133 99 0.00020 Description gp:[GI:g2689564] [LN:U93688] [AC:U93688] [PN:integrase] [GN:int] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst),enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:similar to staphylococcal phage integrase] [LE:13871] [RE:15091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_235762_f2_11 1681 5453 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_23626577_c2_32 1682 5454 210 69 56 0.0035 Description gp:[GI:d1009788:g829068] [LN:SHFORF] [AC:D50601] [PN:ORF10] [OR:Shigella sonnei] [SR:Shigella sonnei (individual_isolate HW383) DNA, clone pJK1142] [DB:genpept-bct1] [DE:Shigella sonnei DNA for 26 ORFs, complete cds.] [LE:5933] [RE:6628] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_24297062_f1_1 1683 5455 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_24642202_c1_30 1684 5456 648 215 822 5.8e−82 Description gp:[GI:g2689554] [LN:U93688] [AC:U93688] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst),enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:orf7] [LE:6109] [RE:6708] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_25665687_c2_33 1685 5457 876 291 322 5.6e−29 Description gp:[GI:g2689560] [LN:U93688] [AC:U93688] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst),enterotoxin (ent) , and integrase (int) genes, complete cds.] [NT:orf13] [LE:9717] [RE:10004] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_34428905_f1_3 1686 5458 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_35428187_c3_37 1687 5459 438 145 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_36601678_c1_29 1688 5460 1728 575 102 0.010 Description gp:[GI:g1004289] [LN:PPRNAE14B] [AC:Z50050] [PN:Xylanase B] [OR:Penicillium purporogenum] [DB:genpept-pln1] [EC:3.2.1.8] [DE:P.purpurogenum mRNA for endo-1,4-beta-xylanase.] [LE:11] [RE:637] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_4303175_f1_10 1689 5461 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000988_9923176_f3_20 1690 5462 162 53 56 0.013 Description sp:[LN:NU5M_CAEEL] [AC:P24896] [GN:ND5] [OR:CAENORHABDITIS ELEGANS] [EC:1.6.5.3] [DE:NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5,] [SP:P24896] [DB:swissprot] >pir:[LN:S26037] [AC:S26037:S25810] [PN:NADH dehydrogenase (ubiquinone), chain 5] [GN:ND5] [CL:NADH dehydrogenase (ubiquinone) chain 5] [OR:mitochondrion Caenorhabditis elegans] [EC:1.6.5.3] [DB:pir2] >gp:[GI:g515886] [LN:MTCE] [AC:X54252:S93745] [OR:Mitochondrion Caenorhabditis elegans] [SR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:C. elegans complete mitochondrial genome.] [NT:ND5 protein (AA 1–527)] [SP:P24896] [LE:11691] [RE:13274] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10003756_f3_471 1691 5463 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10193763_c2_864 1692 5464 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10194713_f1_31 1693 5465 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10241287_c2_822 1694 5466 663 220 74 0.037 Description gp:[GI:g924349] [LN:HIV1U13473] [AC:U13473] [PN:envelope glycoprotein V1V2 region] [GN:env] [OR:Human immunodeficiency virus type 1] [DB:genpept-vr1] [DE:Human immunodeficiency virus type 1 isolate 037 clone 03 fromUganda, envelope glycoprotein (env) gene, V1V2 region, partial cds.] [LE:<1] [RE:>285] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10268812_c2_820 1695 5467 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10360902_f3_536 1696 5468 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1042202_c3_948 1697 5469 1074 357 625 4.4e−61 Description sp:[LN:POTD_ECOLI] [AC:P23861] [GN:POTD] [OR:ESCHERICHIA COLI] [DE:SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN PRECURSOR (SPBP)] [SP:P23861] [DB:swissprot] >pir:[LN:D40840] [AC:D40840:H64856] [PN:spermidine/putrescine-binding protein precursor:spermidine/putrescine transport protein D] [GN:potD] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1036929:g1651550] [LN:D90747] [AC:D90747:AB001340] [PN:Spermidine/putrescine transport protein D] [GN:potD] [OR:Escherichia coli] [SR:Escherichia coli(strain:K12) DNA, clone:Kohara clone #238] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (25.2–25.6 min).] [NT:ORF_ID:o238#12; similar to PIR Accession Number] [LE:13470] [RE:14516] [DI:complement] >gp:[GI:g1787367] [LN:AE000212] [AC:AE000212:U00096] [PN:spermidine/putrescine periplasmic transport] [GN:potD] [FN:transport; Transport of small molecules: Amino] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 102 of 400 of the completegenome.] [NT:f348; 100 pct identical to POTD_ECOLI SW: P23861] [LE:7785] [RE:8831] [DI:complement] >gp:[GI:g147329] [LN:ECOPOTABCD] [AC:M64519] [PN:transport protein] [GN:potD] [OR:Escherichia coli] [SR:E.coli (strain DR112) DNA, clone pPT104] [DB:genpept-bct2] [DE:E.coli transport protein (potA, potB, potC and potD) genes,complete cds.] [LE:3144] [RE:4190] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10579000_c1_734 1698 5470 957 318 728 5.3e−72 Description sp:[LN:COXX_BACSU] [AC:P24009] [GN:CTAB] [OR:BACILLUS SUBTILIS] [DE:PROBABLE CYTOCHROME C OXIDASE ASSEMBLY FACTOR] [SP:P24009] [DB:swissprot] >pir:[LN:C69609] [AC:C69609:S14395] [PN:cytochrome caa3 oxidase (assembly factor) ctaB] [GN:ctaB] [CL:heme O synthase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334763:g2339991] [LN:BS16823KB] [AC:Z98682] [PN:CtaB protein] [GN:ctaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [SP:P24009] [LE:4441] [RE:5358] [DI:direct] >gp:[GI:g994794] [LN:BSCTABF] [AC:X54140] [PN:cytochrome a assembly facto] [GN:ctaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.9.3.1] [DE:B. subtilis ctaB-F genes for cytochrome a assembly factor andcytochrome-c oxidase (EC 1.9.3.1) subunits II, I, II, and IVB.] [NT:putative] [SP:P24009] [LE:408] [RE:1325] [DI:direct] >gp:[GI:e1185078:g2633859] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:cytochrome caa3 oxydase assembly factor] [GN:ctaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791to 1603020.] [SP:P24009] [LE:163924] [RE:164841] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1063753_c2_874 1699 5471 1374 457 2070 3.3e−214 Description sp:[LN:MURD_STAAU] [AC:O33595:O07323] [GN:MURD] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.3.2.9] [DE:ADDING ENZYME)] [SP:O33595:O07323] [DB:swissprot] >pir:[LN:JC6560] [AC:JC6560] [PN:UDP-N-acetylmuramoylalanine--D-glutamate ligase, :UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase] [GN:murD] [OR:Staphylococcus aureus] [EC:6.3.2.9] [DB:pir2] >gp:[GI:g2271510] [LN:AF009671] [AC:AF009671] [PN:UDP-N-acetylmuramoyl-L-alanine: D-glutamate] [GN:murD] [FN:catalyzes ATP-dependent D-glutamate addition] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus UDP-N-acetylmuramoyl-L-alanine:D-glutamateligase (murD) gene, complete cds.] [NT:MurD] [LE:1] [RE:1350] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10740628_f3_637 1700 5472 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10928_c3_958 1701 5473 1242 413 239 1.1e−17 Description pir:[LN:T03492] [AC:T03492] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:pir2] [MP:1] >gp:[GI:g3128293] [LN:AF010496] [AC:AF010496] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:genpept-bct2] [DE:Rhodobacter capsulatus strain SB1003, partial genome.] [LE:54291] [RE:55613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10969052_c3_935 1702 5474 1725 574 2602 1.4e−270 Description sp:[LN:PT1_STAAU] [AC:P51183] [GN:PTSI] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.3.9] [DE:(PHOSPHOTRANSFERASE SYSTEM, ENZYME I)] [SP:P51183] [DB:swissprot] >gp:[GI:g1070386] [LN:SAPTSHI] [AC:X93205] [PN:phosphoenolpyruvate-protein phosphatase] [GN:ptsI] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:2.7.3.9] [DE:S.aureus ptsH and ptsI genes.] [SP:P51183] [LE:462] [RE:2180] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_10972150_c3_1037 1703 5475 2055 684 3024 0.0 Description sp:[LN:RECG_STAAU] [AC:O50581] [GN:RECG] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.6.1.-] [DE:ATP-DEPENDENT DNA HELICASE RECG,] [SP:O50581] [DB:swissprot] >gp:[GI:d1025491:g2826896] [LN:AB000439] [AC:AB000439] [PN:RecG] [GN:recG] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:RN4220) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus recG gene, complete cds.] [LE:319] [RE:2379] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1173177_f3_667 1704 5476 1053 350 691 4.4e−68 Description sp:[LN:YAAF_ECOLI] [AC:P22564] [GN:YAAF] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 32.6 KD PROTEIN IN LYTB-DAPB INTERGENIC REGION] [SP:P22564] [DB:swissprot] >pir:[LN:JE0404] [AC:JE0404:S40553:F64723:S22291] [PN:probable glycosidase, yaaF] [GN:yaaF] [CL:yaaF protein] [OR:Escherichia coli] [EC:3.2.-.-] [DB:pir2] >gp:[GI:g41934] [LN:ECLSPDAP] [AC:X54945] [GN:ORF 3] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E. coli lsp-dapB interval.] [NT:product appears to be membrane bound] [SP:P22564] [LE:1613] [RE:2527] [DI:direct] >gp:[GI:d1001780:g216457] [LN:ECO110K] [AC:D10483:J01597:J01683:J01706:K01298:K01990:M10420:M10611:M12544] [OR:Escherichia coli] [SR:Escherichia coli (strain:K-12) DNA] [DB:genpept-bct1] [DE:E.coli K12 genome, 0–2.4 min. region.] [NT:hypothetical 32.6K protein(PIR:JE0404)] [LE:26947] [RE:27861] [DI:direct] >gp:[GI:g1786213] [LN:AE000113] [AC:AE000113:U00096] [PN:orf, hypothetical protein] [GN:yaaF] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 3 of 400 of the completegenome.] [NT:o304; 100 pct identical to YAAF_ECOLI SW: P22564] [LE:6634] [RE:7548] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1178828_c2_810 1705 5477 705 234 649 1.3e−63 Description gp:[GI:g4097530] [LN:LLU64311] [AC:U64311] [PN:phosphoribosylaminoimidazolesuccinocarboxamide] [GN:purC] [OR:Lactococcus lactis] [DB:genpept-bct2] [EC:6.3.2.6] [DE:Lactococcus lactis phosphoribosylaminoimidazolesuccinocarboxamidesynthetase (purC), phosphoribosylformylglycinamidine synthetase I (purQ), phosphoribosylformylglycinamidine synthetase II (purL), andphosphoribosylpyrophosphate amidotransferase (purF) genes, completecds; and unknown gene.] [NT:SAICAR synthetase] [LE:792] [RE:1502] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1179542_c2_839 1706 5478 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_11806512_f3_562 1707 5479 207 68 86 0.0050 Description gp:[GI:e1344613:g3874900] [LN:CEC41G6] [AC:Z81047] [GN:C41G6.8] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid C41G6, complete sequence.] [LE:18951:19702:20184] [RE:19549:20043:20463] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1204567_c2_897 1708 5480 750 249 481 8.0e−46 Description pir:[LN:G69878] [AC:G69878] [PN:conserved hypothetical protein yloO] [GN:yloO] [CL:conserved hypothetical protein yloO:conserved hypothetical protein yloO homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185167:g2633948] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421to 1807200.] [NT:similar to hypothetical proteins] [LE:51363] [RE:52127] [DI:direct] >gp:[GI:e323505:g2337805] [LN:BSY13937] [AC:Y13937] [PN:putative Ptc1 protein] [GN:yloO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:13135] [RE:13899] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1209638_c1_775 1709 5481 540 179 642 6.9e−63 Description sp:[LN:LSPA_STAAU] [AC:P31024] [GN:LSPA:LSP] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.4.23.36] [DE:PEPTIDASE) (SIGNAL PEPTIDASE II) (SPASE II)] [SP:P31024] [DB:swissprot] >pir:[LN:S20433] [AC:S20433] [PN:lipoprotein signal peptidase,] [CL:lipoprotein signal peptidase] [OR:Staphylococcus aureus] [EC:3.4.23.36] [DB:pir2] >gp:[GI:g153045] [LN:STALSP] [AC:M83994:M84707] [PN:prolipoprotein signal peptidase] [GN:lsp] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus prolipoprotein signal peptidase (lsp) gene,complete cds.] [LE:1213] [RE:1704] [DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1209682_c2_856 1710 5482 2409 802 1984 4.3e−205 Description sp:[LN:SYFB_BACSU] [AC:P17922:P94540] [GN:PHET] [OR:BACILLUS SUBTILIS] [EC:6.1.1.20] [DE:TRNA LIGASE BETA CHAIN) (PHERS)] [SP:P17922:P94540] [DB:swissprot] >pir:[LN:YFBSB] [AC:A69676:140460:S11731] [PN:phenylalanine--tRNA ligase, beta chain:phenylalanyl-tRNA synthetase beta chain] [GN:pheT] [CL:phenylalanine--tRNA ligase beta chain] [OR:Bacillus subtilis] [EC:6.1.1.20] [DB:pir1] >gp:[GI:e1184112:g2635328] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:phenylalanyl-tRNA synthetase (beta subunit)] [GN:pheT] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.20] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [SP:P17922] [LE:130980] [RE:133394] [DI:complement] >gp:[GI:e1165325:g1770031] [LN:BSZ75208] [AC:Z75208] [PN:phenylalanyl-tRNA synthetase beta subunit] [GN:pheT] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.20] [DE:B. subtilis genomic sequence 89009bp.] [NT:phenylalanyl-tRNA synthetase beta subunit] [SP:P17922] [LE:36513] [RE:38927] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_13720312_c3_1024 1711 5483 240 79 117 3.0e−07 Description pir:[LN:C69878] [AC:C69878] [PN:hypothetical protein yloH] [GN:yloH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185160:g2633941] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [LE:43546] [RE:43749] [DI:direct] >gp:[GI:e323522:g2337798] [LN:BSY13937] [AC:Y13937] [PN:putative rpoZ protein] [GN:yloH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:5318] [RE:5521] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_13757785_f3_639 1712 5484 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_1376317_c2_881 1713 5485 564 187 481 8.0e−46 Description gp:[GI:e199384:g1514599] [LN:LPPYRBSOP] [AC:Z54240] [GN:pyrR] [FN:regulatory protein] [OR:Lactobacillus plantarum] [DB:genpept-bct1] [DE:L. plantarum pyrimidine biosynthetic operon (pyrR, pyrB, pyrC, pyrAA, pyrAB, pyrD, pyrF, and pyrE) genes.] [LE:781] [RE:1323] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_13797076_c3_915 1714 5486 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_13864213_f3_624 1715 5487 234 77 186 1.4e−14 Description pir:[LN:D69871] [AC:D69871] [PN:hypothetical protein ykzG] [GN:ykzG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185044:g2633825] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykzG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:129406] [RE:129615] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_13869091_f2_433 1716 5488 294 97 246 6.4e−21 Description sp:[LN:QOX4_BACSU] [AC:P34959] [GN:QOXD:IPA-40D] [OR:BACILLUS SUBTILIS] [EC:1.9.3.—] [DE:SUBUNIT QOXD)] [SP:P34959] [DB:swissprot] >pir:[LN:D38129] [AC:D38129:S39695:H69687] [PN:quinol oxidase aa3-600 chain IV qoxD:cytochrome aa3 quinol oxidase (subunit IV) qoxD] [GN:qoxD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143399] [LN:BACQOXA] [AC:M86548] [PN:quinol oxidase] [GN:QOXD] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis AA3-600 quinol oxidase (QOXA, QOXB, QOXC, QOXD) genes, complete cds.] [LE:4425] [RE:4799] [DI:direct] >gp:[GI:g413964] [LN:BSGENR] [AC:X73124] [GN:ipa-40d qoxD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P34959] [LE:42877] [RE:43251] [DI:direct] >gp:[GI:e1186313:g2636349] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:cytochrome aa3 quinol oxidase (subunit IV)] [GN:qoxD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:alternate gene name:ipa-40d] [SP:P34959] [LE:114711] [RE:115085] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_13916017_c1_738 1717 5489 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14460882_c2_840 1718 5490 240 79 321 7.2e−29 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14557882_f3_532 1719 5491 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14642135_c3_957 1720 5492 1905 634 2456 4.1e−255 Description sp:[LN:TYPA_BACSU] [AC:O07631] [GN:TYPA] [OR:BACILLUS SUBTILIS] [DE:GTP-BINDING PROTEIN TYPA/BIPA HOMOLOG] [SP:O07631] [DB:swissprot] >pir:[LN:E69872] [AC:E69872] [PN:GTP-binding elongation factor homolog ylaG] [GN:ylaG] [CL:translation elongation factor Tu homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185067:g2633848] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylaG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to GTP-binding elongation factor] [SP:O07631] [LE:150736] [RE:152574] [DI:direct] >gp:[GI:e1191893:g2224766] [LN:BSZ97025] [AC:Z97025] [GN:ylaG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis nprE, yla[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] and pycA genes.] [NT:product highly similar to elongation factor EF-G] [SP:O07631] [LE:4995] [RE:6833] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14644066_c2_865 1721 5493 189 62 79 0.0032 Description gp:[GI:g3212079] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 1] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenol soluble modulin beta 2 genes, complete cds.] [NT:PSM beta 1] [LE:669] [RE:803] [DI:direct] >gp:[GI:g3212080] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 2] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenol soluble modulin beta 2 genes, complete cds.] [NT:PSM beta 2] [LE:859] [RE:993] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14650302_c1_688 1722 5494 264 87 179 8.0e−14 Description sp:[LN:YEXA_BACSU] [AC:P12049] [GN:YEXA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 9.7 KD PROTEIN IN PURC-PURL INTERGENIC REGION] [SP:P12049] [DB:swissprot] >pir:[LN:E29326] [AC:E29326:E69799] [PN:conserved hypothetical protein yexA:hypothetical protein (pur operon)] [GN:yexA] [CL:conserved hypothetical protein MJ1593] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182626:g2632960] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yexA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to hypothetical proteins] [LE:101124] [RE:101378] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14664012_f2_323 1723 5495 468 155 341 5.4e−31 Description pir:[LN:E69875] [AC:E69875] [PN:hypothetical protein ylbP] [GN:ylbP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334785:g2340013] [LN:BS16823KB] [AC:Z98682] [PN:YlbP protein] [GN:ylbP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:21896] [RE:22378] [DI:complement] >gp:[GI:e1185100:g2633881] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [LE:181379] [RE:181861] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14851587_c3_1010 1724 5496 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_14875002_f2_408 1725 5497 141 46 85 0.0044 Description gp:[GI:g488889] [LN:A12521] [AC:A12521] [PN:Acidic Basic Repeat Antigen Rhoptry (ABRA)] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-pat] [DE:Ag189 clone.] [LE:1:61] [RE:45:963] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_156502_f1_179 1726 5498 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_16593800_f2_359 1727 5499 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19537562_f2_429 1728 5500 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19537878_f1_177 1729 5501 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19556326_f1_94 1730 5502 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19557752_c1_777 1731 5503 912 303 844 2.7e−84 Description sp:[LN:PYRB_BACSU] [AC:P05654] [GN:PYRB] [OR:BACILLUS SUBTILIS] [EC:2.1.3.2] [DE:TRANSCARBAMYLASE) (ATCASE)] [SP:P05654] [DB:swissprot] >pir:[LN:OWBSAC] [AC:A25015:C39845:B69686] [PN:aspartate carbamoyltransferase, catalytic chain:aspartate transcarbamoylase] [GN:pyrB] [CL:ornithine carbamoyltransferase:aspartate/ornithine carbamoyltransferase homology] [OR:Bacillus subtilis] [EC:2.1.3.2] [DB:pir1] [MP:37 min] >gp:[GI:g143384] [LN:BACPYRB] [AC:M13128] [OR:Bacillus subtilis] [SR:B. subtilis (strain JH861) DNA, clone pLS201] [DB:genpept-bct1] [DE:B. subtilis pyrB gene encoding aspartate transcarbamoylase, complete cds.] [NT:aspartate transcarbamoylase (EC 2.1.3.2)] [LE:96] [RE:1010] [DI:direct] >gp:[GI:e1185141:g2633922] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:aspartate carbamoyltransferase] [GN:pyrB] [FN:pyrimidine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.3.2] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [SP:P05654] [LE:21455] [RE:22369] [DI:direct] >gp:[GI:g143387] [LN:BACPYROP] [AC:M59757] [PN:aspartate transcarbamylase] [GN:pyrB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ORF1A (pyrR), putative membrane-bound uracilpermease (pyrP), aspartate transcarbamylase (pyrB), dihydroorotase (pyrC), glutaminase of carbamyl phosphate synthetase (pyrAA), carbamyl phosphate synthetase (pyrAB), dihydroorotase dehydrogenase (pyrD), OMP decarboxylase (pyrF), and OMP-PRPP transferase (pyrE) genes, complete cds; and unknown gene.] [LE:2859] [RE:3773] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19565627_c2_879 1732 5504 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19609530_f1_155 1733 5505 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19804703_c2_811 1734 5506 747 248 696 1.3e−68 Description sp:[LN:PURQ_BACSU] [AC:P12041] [GN:PURQ] [OR:BACILLUS SUBTILIS] [EC:6.3.5.3] [DE:SYNTHASE I)] [SP:P12041] [DB:swissprot] >pir:[LN:SYBS1G] [AC:F29326:H69684] [PN:phosphoribosylformylglycinamidine synthase, component I] [GN:purQ] [CL:phosphoribosylformylglycinamidine synthase component I] [OR:Bacillus subtilis] [EC:6.3.5.3] [DB:pir1] [MP:18 min] >gp:[GI:g143368] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosylformyl glycinamidine synthetase I] [LE:4393] [RE:5076] [DI:direct] >gp:[GI:e1182627:g2632961] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylformylglycinamidine synthetase II] [GN:purL] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.5.3] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12041] [LE:101375] [RE:102058] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_19957802_c1_752 1735 5507 1896 631 2764 9.5e−288 Description gp:[GI:e1333202:g3776112] [LN:SATRXA] [AC:AJ223480] [PN:excinuclease ABC, subunit C] [GN:uvrC] [FN:excision of ultraviolet light-induced] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus trxA and uvrC genes and partial mutS and dhsC genes.] [NT:alternative gene name: uvrB] [LE:2972] [RE:4753] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_20312515_f2_242 1736 5508 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_20500055_f1_218 1737 5509 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_20502217_c3_990 1738 5510 1626 541 718 6.1e−71 Description pir:[LN:G69875] [AC:G69875] [PN:hypothetical protein yllA] [GN:yllA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185102:g2633883] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:yllA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:182988] [RE:184607] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_2067627_c2_849 1739 5511 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_20890875_c2_801 1740 5512 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_209840_f1_44 1741 5513 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_20994212_f1_151 1742 5514 207 68 71 0.022 Description pir:[LN:D69872] [AC:D69872] [PN:hypothetical protein ylaF] [GN:ylaF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185066:g2633847] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylaF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:150435] [RE:150623] [DI:complement] >gp:[GI:e324391:g2224765] [LN:BSZ97025] [AC:Z97025] [GN:ylaF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis nprE, yla[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] and pycA genes.] [LE:4694] [RE:4882] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_211677_c3_989 1743 5515 702 233 436 4.7e−41 Description pir:[LN:E69814] [AC:E69814] [PN:conserved hypothetical protein yfnB] [GN:yfnB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182712:g2633046] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yfnB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to hypothetical proteins] [LE:203465] [RE:204172] [DI:complement] >gp:[GI:e1182723:g2633057] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfnB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to hypothetical proteins] [LE:1345] [RE:2052] [DI:complement] >gp:[GI:d1020926:g2116760] [LN:D86418] [AC:D86418] [PN:YfnB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 69–70 degree region, partial sequence.] [LE:9019] [RE:9726] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_21648962_c3_930 1744 5516 1827 608 1793 7.4e−185 Description gp:[GI:g517205] [LN:SPU09352] [AC:U09352] [PN:67 kDa Myosin-crossreactive streptococcal] [OR:Streptococcus pyogenes] [DB:genpept-bct1] [DE:Streptococcus pyogenes 42 KD protein (ORF1) gene and 67 KD Myosin-crossreactive streptococcal antigen gene, complete cds.] [NT:ORF2] [LE:1734] [RE:3506] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_21656327_c1_761 1745 5517 936 311 1464 5.4e−150 Description gp:[GI:g2149891] [LN:SAU94706] [AC:U94706] [PN:unknown] [GN:yllC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:987] [RE:1922] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_21759653_f3_666 1746 5518 609 202 552 2.4e−53 Description sp:[LN:QOX3_BACSU] [AC:P34958] [GN:QOXC:IPA-39D] [OR:BACILLUS SUBTILIS] [EC:1.9.3.—] [DE:SUBUNIT QOXC)] [SP:P34958] [DB:swissprot] >pir:[LN:C38129] [AC:C38129:S39694:G69687] [PN:bo-type ubiquinol oxidase, chain III qoxC:cytochrome aa3 quinol oxidase (subunit III) qoxC] [GN:qoxC] [CL:cytochrome-c oxidase chain III] [OR:Bacillus subtilis] [EC:1.10.3.—] [DB:pir2] >gp:[GI:g143398] [LN:BACQOXA] [AC:M86548] [PN:quinol oxidase] [GN:QOXC] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis AA3-600 quinol oxidase (QOXA, QOXB, QOXC, QOXD) genes, complete cds.] [LE:3809] [RE:4423] [DI:direct] >gp:[GI:g413963] [LN:BSGENR] [AC:X73124] [GN:ipa-39d qoxC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P34958] [LE:42261] [RE:42875] [DI:direct] >gp:[GI:e1186314:g2636350] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:cytochrome aa3 quinol oxidase (subunit III)] [GN:qoxC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] NT:alternate gene name:ipa-39d] [SP:P34958] [LE:115087] [RE:115701] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_21915911_f1_197 1747 5519 894 297 229 4.0e−19 Description pir:[LN:G69858] [AC:G69858] [PN:hypothetical protein ykoC] [GN:ykoC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181521:g2632041] [LN:BSAJ2571] [AC:AJ002571] [PN:YkoC] [GN:ykoC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:40195] [RE:40959] [DI:complement] >gp:[GI:e1183341:g2633675] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykoC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [LE:193144] [RE:193908] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22000943_f1_216 1748 5520 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22400283_c2_830 1749 5521 981 326 1329 1.1e−135 Description pir:[LN:C36718] [AC:C36718:A69674] [PN:pyruvate dehydrogenase (lipoamide), E1 beta chain precursor pdhB] [GN:pdhB] [CL:pyruvate dehydrogenase (lipoamide) beta chain] [OR:Bacillus subtilis] [EC:1.2.4.1] [DB:pir2] >gp:[GI:g143378] [LN:BACPYDHY] [AC:M57435:M31542] [PN:pyruvate decarboxylase (E-1) beta subunit] [GN:pdhB] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) BRB1 (sacA321 metB5) cell line DNA, clone] [DB:genpept-bct1] [EC:1.2.4.1] [DE:B. subtilis pyruvate dehydrogenase complex genes, complete cds; PAL-related lipoprotein (slp) gene, complete cds, lysinedecarboxylase (cad) gene, partial cds.] [LE:2796] [RE:3773] [DI:direct] >gp:[GI:e1185049:g2633830] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:pyruvate dehydrogenase (E1 beta subunit)] [GN:pdhB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.2.4.1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [SP:P21882] [LE:134060] [RE:135037] [DI:direct] >gp:[GI:g3282143] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:pyruvate decarboxylase E-1 beta subunit] [GN:pdhB] [OR:Bacillus subtilis] [DB:genpept-bct2] [EC:1.2.4.1] [DE:Bacillus subtilismobA-nprE gene region.] [NT:similar to pyruvate decarboxylase (E-1) beta] [LE:34548] [RE:35525] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_2242938_c3_1009 1750 5522 933 310 1055 1.2e−106 Description sp:[LN:YLYB_BACSU] [AC:Q45480:O31732] [GN:YLYB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 33.7 KD PROTEIN IN LSP-PYRR INTERGENIC REGION (ORF-X)] [SP:Q45480:O31732] [DB:swissprot] >gp:[GI:g1373157] [LN:BSU48870] [AC:U48870] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis signal peptidase II (lsp) gene, complete cds, isoleucyl-tRNA synthetase (ileS) and pyrR genes, partial cds.] [NT:orf-X; hypothetical protein; Method:conceptual] [LE:1658] [RE:2569] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22461078_c1_769 1751 5523 735 244 814 4.1e−81 Description gp:[GI:g1314301] [LN:SAU41072] [AC:U41072] [PN:unknown] [GN:ORF] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus isoleucyl-tRNA synthetase (ileS) gene, partial cds.] [LE:106] [RE:723] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22462802_c3_1026 1752 5524 1203 400 1070 3.1e−108 Description pir:[LN:D69878] [AC:D69878] [PN:pantothenate metabolism flavoprotein homolog yloI] [GN:yloI] [CL:pantothenate metabolism flavoprotein dfp] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185161:g2633942] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to pantothenate metabolism flavoprotein] [LE:43830] [RE:45050] [DI:direct] >gp:[GI:e323501:g2337799] [LN:BSY13937] [AC:Y13937] [PN:putative Dfp protein] [GN:yloI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:5602] [RE:6822] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22478427_c3_987 1753 5525 138 45 115 4.8e−07 Description sp:[LN:GGI2_STAHA] [AC:P11698] [OR:STAPHYLOCOCCUS HAEMOLYTICUS] [DE:ANTIBACTERIAL PROTEIN 2 (GONOCOCCAL GROWTH INHIBITOR 2)] [SP:P11698] [DB:swissprot] >pir:[LN:BXSA2] [AC:S00600] [PN:antibacterial protein 2:gonococcal growth inhibitor 2] [CL:Staphylococcus haemolyticus antibacterial protein] [OR:Staphylococcus haemolyticus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22542567_c2_855 1754 5526 759 252 562 2.1e−54 Description pir:[LN:G69984] [AC:G69984] [PN:rRNA methylase homolog ysgA] [GN:ysgA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184114:g2635330] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysgA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to rRNA methylase] [LE:134799] [RE:135545] [DI:complement] >gp:[GI:e1165323:g1770029] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysgA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:Homology to spoU-type rRNA methyltransferases;] [LE:34362] [RE:35108] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22775126_f2_411 1755 5527 633 210 263 1.0e−22 Description pir:[LN:A69859] [AC:A69859] [PN:hypothetical protein ykoE] [GN:ykoE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181523:g2632043] [LN:BSAJ2571] [AC:AJ002571] [PN:YkoE] [GN:ykoE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:42565] [RE:43164] [DI:complement] >gp:[GI:e1183343:g2633677] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykoE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [LE:195514] [RE:196113] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_22931642_c2_802 1756 5528 1224 407 1250 2.6e−127 Description gp:[GI:d1024918:g2696796] [LN:AB009635] [AC:AB009635] [PN:Fmt] [GN:fmt] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:KSA8) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for Fmt, complete cds.] [LE:1234] [RE:2427] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23438887_c1_748 1757 5529 300 99 196 1.3e−15 Description pir:[LN:A69985] [AC:A69985] [PN:hypothetical protein yshA] [GN:yshA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184110:g2635326] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yshA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:129612] [RE:129869] [DI:complement] >gp:[GI:e1165327:g1770033] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:yshA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:40038] [RE:40295] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23442177_f3_600 1758 5530 669 222 429 2.6e−40 Description pir:[LN:D69864] [AC:D69864] [PN:hypothetical protein yktB] [GN:yktB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185055:g2633836] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:yktB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:140850] [RE:141488] [DI:complement] >gp:[GI:g3282149] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:yktB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [LE:41338] [RE:41976] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23448838_f1_217 1759 5531 873 290 786 3.8e−78 Description sp:[LN:FOLD_BACSU] [AC:P54382] [GN:FOLD] [OR:BACILLUS SUBTILIS] [EC:1.5.1.5:3.5.4.9] [DE:METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE,] [SP:P54382] [DB:swissprot] >pir:[LN:E69626] [AC:E69626] [PN:methylenetetrahydrofolate dehydrogenase (NADP+), / methenyltetrahydrofolate cyclohydrolase,] [GN:folD] [CL:methylenetetrahydrofolate dehydrogenase (NAD+): methylenetetrahydrofolate dehydrogenase (NAD+) homology] [OR:Bacillus subtilis] [EC:1.5.1.5:3.5.4.9] [DB:pir2] >gp:[GI:d1013251:g1303916] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqiA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:190351] [RE:191202] [DI:direct] >gp:[GI:e1185699:g2634865] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:methenyltetrahydrofolate cyclohydrolase] [GN:folD] [FN:purines and amino acids biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.5.1.5:3.5.4.9] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:alternate gene name:yqiA;] [SP:P54382] [LE:132419] [RE:133270] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23453767_f1_62 1760 5532 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23492327_f1_37 1761 5533 204 67 126 3.3e−08 Description pir:[LN:S75993] [AC:S75993] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1011491:g1001353] [LN:SYCSLLLH] [AC:D64006:AB001339] [PN:hypothetical protein] [GN:clpP] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 25/27, 3138604–3270709.] [NT:ORF_ID:sll0498] [LE:80076] [RE:80528] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23532327_c2_829 1762 5534 1113 370 1432 1.3e−146 Description sp:[LN:ODPA_BACST] [AC:P21873] [GN:PDHA] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:1.2.4.1] [DE:PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT,] [SP:P21873] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23550313_f2_329 1763 5535 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23572178_c2_861 1764 5536 846 281 1070 3.1e−108 Description sp:[LN:DHSB_BACSU] [AC:P08066] [GN:SDHB] [OR:BACILLUS SUBTILIS] [EC:1.3.99.1] [DE:SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN,] [SP:P08066] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23572253_c1_796 1765 5537 741 246 623 7.1e−61 Description pir:[LN:B69693] [AC:B69693:JC4821] [PN:ribonuclease III,:RNase D:RNase O] [GN:rncS:srb] [CL:ribonuclease III:double-stranded RNA-binding repeat homology] [OR:Bacillus subtilis] [EC:3.1.26.3] [DB:pir2] >gp:[GI:e1185184:g2633965] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:ribonuclease III] [GN:rncS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.26.3] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:rnc] [LE:66689] [RE:67438] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23632962_c2_880 1766 5538 810 269 270 1.8e−23 Description sp:[LN:YFIE_BACSU] [AC:P54721] [GN:YFIE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.5 KD PROTEIN IN GLVBC 3′REGION] [SP:P54721] [DB:swissprot] >pir:[LN:H69802] [AC:H69802] [PN:conserved hypothetical protein yfiE] [GN:yfiE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182814:g2633148] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfiE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to hypothetical proteins from B. subtilis] [SP:P54721] [LE:94696] [RE:95553] [DI:direct] >gp:[GI:d1009744:g1486247] [LN:D50543] [AC:D50543] [PN:unknown] [GN:yfiE] [FN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168, haplotype:haploid) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 76-degree region, complete cds.] [LE:8372] [RE:9229] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23642217_c1_790 1767 5539 648 215 396 8.1e−37 Description pir:[LN:C69879] [AC:C69879] [PN:hypothetical protein yloS] [GN:yloS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185171:g2633952] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [LE:55709] [RE:56353] [DI:direct] >gp:[GI:e323508:g2337809] [LN:BSY13937] [AC:Y13937] [PN:YloS protein] [GN:yloS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:17481] [RE:18125] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23647178_c2_903 1768 5540 633 210 398 5.0e−37 Description pir:[LN:A69880] [AC:A69880] [PN:hypothetical protein ylpC] [GN:ylpC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185179:g2633960] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylpC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [LE:62946] [RE:63512] [DI:direct] >gp:[GI:e323513:g2337817] [LN:BSY13937] [AC:Y13937] [PN:YlpC protein] [GN:ylpC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:24718] [RE:25284] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23650293_c1_785 1769 5541 627 208 693 2.7e−68 Description pir:[LN:B69878] [AC:B69878] [PN:guanylate kinase homolog yloD] [GN:yloD] [CL:guanylate kinase:guanylate kinase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185159:g2633940] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to guanylate kinase] [LE:42808] [RE:43542] [DI:direct] >gp:[GI:e323500:g2337797] [LN:BSY13937] [AC:Y13937] [PN:putative Gmk protein] [GN:yloD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:4580] [RE:5314] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23695900_c2_812 1770 5542 1551 516 1490 9.5e−153 Description gp:[GI:g4097534] [LN:LLU64311] [AC:U64311] [PN:phosphoribosylpyrophosphate amidotransferase] [GN:purF] [OR:Lactococcus lactis] [DB:genpept-bct2] [EC:2.4.2.14] [DE:Lactococcus lactis phosphoribosylaminoimidazolesuccinocarboxamidesynthetase (purC), phosphoribosylformylglycinamidine synthetase I (purQ), phosphoribosylformylglycinamidine synthetase II (purL), and phosphoribosylpyrophosphate amidotransferase (purF) genes, complete cds; and unknown gene.] [NT:PRPP ATase] [LE:4921] [RE:6441] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23730340_c1_716 1771 5543 1422 473 2270 2.1e−235 Description pir:[LN:S19723] [AC:519723] [PN:dihydrolipoamide dehydrogenase,:pyruvate dehydrogenase complex chain E3] [GN:pdhD] [CL:dihydrolipoamide dehydrogenase dihydrolipoamide dehydrogenase homology] [OR:Staphylococcus aureus] [EC:1.8.1.4] [DB:pir1] >gp:[GI:g48874] [LN:SAPDHDNA] [AC:X58434:S73625] [PN:dihydrolipoamide dehydrogenase:subunit E3] [GN:pdhD] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:1.8.1.4] [DE:S. aureus pdhB, pdhC and pdhD genes for pyruvate decarboxylase, dihydrolipoamide acetyltransferase and dihydrolipoamidedehydrogenase.] [LE:1853] [RE:3259] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23836036_c2_887 1772 5544 192 63 153 1.2e−09 Description sp:[LN:CARB_BACCL] [AC:P46537] [GN:PYRAB] [OR:BACILLUS CALDOLYTICUS] [EC:6.3.5.5] [DE:(EC 6.3.5.5) (CARBAMOYL-PHOSPHATE SYNTHETASE AMMONIA CHAIN)] [SP:P46537] [DB:swissprot] >pir:[LN:I40169] [AC:I40169:S34321] [PN:carbamoyl-phosphate synthase (glutamine-hydrolyzing),] [GN:pyrAb] [CL:carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain:biotin carboxylase homology:carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain homology] [OR:Bacillus caldolyticus] [EC:6.3.5.5] [DB:pir2] >gp:[GI:g312443] [LN:BCPYR] [AC:X73308] [PN:carbamoyl-phosphate synthase] [GN:PyrAb] [OR:Bacillus caldolyticus] [DB:genpept-bct1] [EC:6.3.5.5] [DE:B. caldolyticus pyrimidine biosynthesis genes.] [SP:P46537] [LE:3658] [RE:6855] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_23928937_c3_953 1773 5545 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24025253_f1_219 1774 5546 321 106 198 1.3e−14 Description pir:[LN:T00323] [AC:T00323] [PN:chitinase, B] [OR:Clostridium paraputrificum] [EC:3.2.1.14] [DB:pir3] >gp:[GI:d1024701:g2696017] [LN:AB001874] [AC:AB001874] [PN:chitinase B] [GN:chiB] [OR:Clostridium paraputrificum] [SR:Clostridium paraputrificum (strain:M21) DNA] [DB:genpept-bct1] [EC:3.2.1.14] [DE:Clostridium paraputrificum gene for chitinase B, complete cds.] [LE:1] [RE:2496] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24025467_c2_863 1775 5547 522 173 238 4.5e−20 Description sp:[LN:YSNB_BACSU] [AC:P94559] [GN:YSNB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 19.2 KD PROTEIN IN RPH-ILVB INTERGENIC REGION] [SP:P94559] [DB:swissprot] >pir:[LN:D69986] [AC:D69986] [PN:conserved hypothetical protein ysnB] [GN:ysnB] [CL:conserved hypothetical protein MG207: phosphoesterase core homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184084:g2635300] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysnB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [SP:P94559] [LE:103990] [RE:104505] [DI:complement] >gp:[GI:e1165358:g1770061] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysnB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:homology to HI0260 of Haemophilus influenzae;] [SP:P94559] [LE:65402] [RE:65917] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24220002_f1_67 1776 5548 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24240676_f3_477 1777 5549 246 81 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24256551_c3_923 1780 5552 1071 356 938 3.0e−94 Description gp:[GI:d1023423:g2463562] [LN:AB007500] [AC:AB007500:D28879] [PN:MRAY] [GN:mraY] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:NCTC8325) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for penicillin-binding protein 1, MraY, MurD, partial and complete cds.] [LE:3120] [RE:4085] [DI:direct] >gp:[GI:g4104230] [LN:AF034153] [AC:AF034153] [PN:phospho-N-acetylmuramoyl-pentapeptide] [GN:mraY] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus phospho-N-acetylmuramoyl-pentapeptidetranslocase (mraY) gene, complete cds.] [LE:28] [RE:993] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24256250_f3_467 1779 5551 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24256551_c3_923 1780 5552 1071 356 938 3.0e−94 Description sp:[LN:PUR5_BACSU] [AC:P12043] [GN:PURM:ATH] [OR:BACILLUS SUBTILIS] [EC:6.3.3.1] [DE:(PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHETASE) (AIR SYNTHASE)] [SP:P12043] DB:swissprot] >pir:[LN:AJBSCL] [AC:H29326:A69685] [PN:phosphoribosylformylglycinamidine cyclo-ligase,:phosphoribosylaminoimidazole synthetase] [GN:purM] [CL:phosphoribosylformylglycinamidine cyclo-ligase: phosphoribosylformylglycinamidine cyclo-ligase homology] [OR:Bacillus subtilis] [EC:6.3.3.1] [DB:pir1] [MP:18 min] >gp:[GI:g143371] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosyl aminoimidazole synthetase (PUR-M)] [LE:8796] [RE:9836] [DI:direct] >gp:[GI:e1182630:g2632964] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylaminoimidazole synthetase] [GN:purM] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.3.1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12043] [LE:105778] [RE:106818] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24257877_c2_854 1781 5553 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24261068_c1_758 1782 5554 147 48 215 1.2e−17 Description gp:[GI:g3212079] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 1] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenolsoluble modulin beta 2 genes, complete cds.] [NT:PSM beta 1] [LE:669] [RE:803] [DI:direct] >gp:[GI:g3212080] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 2] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenol soluble modulin beta 2 genes, complete cds.] [NT:PSM beta 2] [LE:859] [RE:993] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24261068_c3_988 1783 5555 147 48 215 1.2e−17 Description gp:[GI:g3212079] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 1] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenol soluble modulin beta 2 genes, complete cds.] [NT:PSM beta 1] [LE:669] [RE:803] [DI:direct] >gp:[GI:g3212080] [LN:AF068633] [AC:AF068633] [PN:phenol soluble modulin beta 2] [FN:inflammatory protein] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis phenol soluble modulin beta 1 and phenol soluble modulin beta 2 genes, complete cds.] [NT:PSM beta 2] [LE:859] [RE:993] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24275137_f1_21 1784 5556 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24297217_c1_780 1785 5557 3114 1037 3756 0.0 Description sp:[LN:CARB_BACCL] [AC:P46537] [GN:PYRAB] [OR:BACILLUS CALDOLYTICUS] [EC:6.3.5.5] [DE:(EC 6.3.5.5) (CARBAMOYL-PHOSPHATE SYNTHETASE AMMONIA CHAIN)] [SP:P46537] [DB:swissprot] >pir:[LN:I40169] [AC:I40169:S34321] [PN:carbamoyl-phosphate synthase (glutamine-hydrolyzing),] [GN:pyrAb] [CL:carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain:biotin carboxylase homology:carbamoyl-phosphate synthase (glutamine-hydrolyzing) large chain homology] [OR:Bacillus caldolyticus] [EC:6.3.5.5] [DB:pir2] >gp:[GI:g312443] [LN:BCPYR] [AC:X73308] [PN:carbamoyl-phosphate synthase] [GN:PyrAb] [OR:Bacillus caldolyticus] [DB:genpept-bct1] [EC:6.3.5.5] [DE:B. caldolyticus pyrimidine biosynthesis genes.] [SP:P46537] [LE:3658] [RE:6855] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24330337_f3_557 1786 5558 957 318 555 1.1e−53 Description pir:[LN:H69984] [AC:H69984] [PN:conserved hypothetical protein ysgB] [GN:ysgB ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184111:g2635327] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysgB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [LE:130003] [RE:130944] [DI:direct] >gp:[GI:e1165326:g1770032] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysgB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:38963] [RE:39904] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24351577_c1_677 1787 5559 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24355342_c1_799 1788 5560 1014 338 1265 6.6e−129 Description sp:[LN:SR54_BACSU] [AC:P37105] [GN:FFH] [OR:BACILLUS SUBTILIS] [DE:SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG)] [SP:P37105] [DB:swissprot] >pir:[LN:B47154] [AC:B47154:H69621] [PN:signal recognition particle chain ffh] [GN:ffh] [CL:signal recognition particle 54 K protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185189:g2633970] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:signal recognition particle] [GN:ffh] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [LE:73153] [RE:74493] [DI:direct] >gp:[GI:d1022545:g2309080] [LN:D14356] [AC:D14356] [PN:Ffh] [GN:ffh] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis orf1, ffh, rpsP genes for ORF1, Ffh and 30S ribosomal protein S16, complete cds.] [LE:711] [RE:2051] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24406291_c2_902 1789 5561 417 138 369 5.9e−34 Description pir:[LN:D69879] [AC:D69879] [PN:alkaline-shock protein homolog yloU] [GN:yloU] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185174:g2633955] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to alkaline-shock protein] [LE:57043] [RE:57405] [DI:direct] >gp:[GI:e323527:g2337812] [LN:BSY13937] [AC:Y13937] [PN:putative Asp23 protein] [GN:yloU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:18815] [RE:19177] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24406563_c1_742 1790 5562 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24407313_f3_590 1791 5563 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24407327_c3_1017 1792 5564 612 203 621 1.2e−60 Description sp:[LN:PYRE_BACSU] [AC:P25972] [GN:PYRE:PYRX] [OR:BACILLUS SUBTILIS] [EC:2.4.2.10] [DE:OROTATE PHOSPHORIBOSYLTRANSFERASE, (OPRT) (OPRTASE)] [SP:P25972] [DB:swissprot] >pir:[LN:F69686] [AC:F69686:A30492] [PN:orotate phosphoribosyltransferase,] [GN:pyrE] [CL:orotate phosphoribosyltransferase:orotate phosphoribosyltransferase homology] [OR:Bacillus subtilis] [EC:2.4.2.10] [DB:pir1] >gp:[GI:e1185148:g2633929] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:orotate phosphoribosyltransferase] [GN:pyrE] [FN:pyrimidine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.2.10] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:pyrX] [SP:P25972] [LE:30299] [RE:30949] [DI:direct] >gp:[GI:g143394] [LN:BACPYROP] [AC:M59757] [PN:OMP-PRPP transferase] [GN:pyrE] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ORF1A (pyrR), putative membrane-bound uracilpermease (pyrP), aspartate transcarbamylase (pyrB), dihydroorotase (pyrC), glutaminase of carbamyl phosphate synthetase (pyrAA), carbamyl phosphate synthetase (pyrAB), dihydroorotase dehydrogenase (pyrD), OMP decarboxylase (pyrF), and OMP-PRPP transferase (pyrE) genes, complete cds; and unknown gene.] [LE:11703] [RE:12353] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24407760_c1_773 1793 5565 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24407936_c2_896 1794 5566 1122 373 1380 4.3e−141 Description sp:[LN:YLON_BACSU] [AC:O34617] [GN:YLON] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 41.6 KD PROTEIN IN FMT-SPOVM INTERGENIC REGION] [SP:O34617] [DB:swissprot] >pir:[LN:F69878] [AC:F69878] [PN:conserved hypothetical protein yloN] [GN:yloN] [CL:conserved hypothetical protein HI0365] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185166:g2633947] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [SP:O34617] [LE:50265] [RE:51356] [DI:direct] >gp:[GI:e323524:g2337804] [LN:BSY13937] [AC:Y13937] [PN:YloN protein] [GN:yloN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [SP:O34617] [LE:12037] [RE:13128] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24412812_c3_986 1795 5567 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24415885_c3_960 1796 5568 1227 408 869 6.1e−87 Description gp:[GI:g4096797] [LN:SCU40157] [AC:U40157] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus condensing-enzyme-like protein (orf1) and spoVE-like protein (orf2) genes, complete cds.] [NT:orf2; unknown function; similar to spoVE, RodA,] [LE:1676] [RE:2779] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24422077_c3_1013 1797 5569 1101 366 1196 1.4e−121 Description sp:[LN:CARA_BACCL] [AC:P52557] [GN:PYRAA] [OR:BACILLUS CALDOLYTICUS] [EC:6.3.5.5] [DE:(EC 6.3.5.5) (CARBAMOYL-PHOSPHATE SYNTHETASE GLUTAMINE CHAIN)] [SP:P52557] [DB:swissprot] >pir:[LN:I40168] [AC:I40168:S34320] [PN:carbamoyl-phosphate synthase (glutamine-hydrolyzing),] [GN:pyrAa] [CL:carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain:carbamoyl-phosphate synthase (glutamine-hydrolyzing) small chain homology:trpG homology] [OR:Bacillus caldolyticus] [EC:6.3.5.5] [DB:pir2] >gp:[GI:g312442] [LN:BCPYR] [AC:X73308] [PN:carbamoyl-phosphate synthase] [GN:PyrAa] [OR:Bacillus caldolyticus] [DB:genpept-bct1] [EC:6.3.5.5] [DE:B. caldolyticus pyrimidine biosynthesis genes.] [SP:P52557] [LE:2571] [RE:3665] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24424038_c1_791 1798 5570 1692 563 1538 7.8e−158 Description pir:[LN:E69879] [AC:E69879] [PN:conserved hypothetical protein yloV] [GN:yloV] [CL:Mycoplasma genitalium hypothetical protein MG369] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185175:g2633956] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloV] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:57421] [RE:59082] [DI:direct] >gp:[GI:e323510:g2337813] [LN:BSY13937] [AC:Y13937] [PN:YloV protein] [GN:yloV] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:19193] [RE:20854] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24475252_f2_371 1799 5571 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24484828_c2_832 1800 5572 552 183 311 8.2e−28 Description gp:[GI:g4981179] [LN:AE001739] [AC:AE001739:AE000512] [PN:conserved hypothetical protein] [GN:TM0656] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 51 of 136 of the complete genome.] [NT:similar to SP:P38522 GB:U00096 PID:1742120] [LE:1379] [RE:1909] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24485950_c3_951 1801 5573 537 178 91 0.015 Description gp:[GI:g5306139] [LN:AF160864] [AC:AF160864] [PN:NADH dehydrogenase subunit 2] [GN:nad2] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [EC:1.6.5.3] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [LE:10108] [RE:10644] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24609637_c3_1001 1802 5574 798 265 916 6.4e−92 Description gp:[GI:g4009492] [LN:AF068904] [AC:AF068904] [PN:YlmD] [GN:ylmD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus cell division protein FtsZ (ftsZ) gene, partial cds; YlmD (ylmD), YlmE (ylmE), YlmF (ylmF), YlmG (ylmG), and YlmH (ylmH) genes, complete cds; and cell division protein DivIVA (divIVA) gene, partial cds.] [NT:similar to Bacillus subtilis YlmD] [LE:437] [RE:1228] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24610885_f2_352 1803 5575 423 140 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24632827_c1_786 1804 5576 963 320 917 5.06e−92 Description pir:[LN:A69626] [AC:A69626] [PN:methionyl-tRNA formyltransferase, fmt] [GN:fmt] [CL:methionyl-tRNA formyltransferase:phosphoribosylglycinamide formyltransferase homology] [OR:Bacillus subtilis] [EC:2.1.2.9] [DB:pir2] >gp:[GI:e1185164:g2633945] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:methionyl-tRNA formyltransferase] [GN:fmt] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.2.9] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:yloL] [LE:47978] [RE:48931] [DI:direct] >gp:[GI:e323503:g2337802] [LN:BSY13937] [AC:Y13937] [PN:putative Fmt protein] [GN:yloL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:9750] [RE:10703] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24642042_c2_853 1805 5577 561 186 255 7.1e−22 Description pir:[LN:C69875] [AC:C69875] [PN:hypothetical protein ylbN] [GN:ylbN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334782:g2340010] [LN:BS16823KB] [AC:Z98682] [PN:YlbN protein] [GN:ylbN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:20393] [RE:20911] [DI:direct] >gp:[GI:e1185097:g2633878] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:179876] [RE:180394] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24642817_c2_862 1806 5578 810 269 1197 1.1e−121 Description sp:[LN:MURI_STAHA] [AC:P52974] [GN:DGA] [OR:STAPHYLOCOCCUS HAEMOLYTICUS] [EC:5.1.1.3] [DE:GLUTAMATE RACEMASE,] [SP:P52974] [DB:swissprot] >gp:[GI:g520574] [LN:SHU12405] [AC:U12405] [PN:glutamate racemase] [GN:dga] [OR:Staphylococcus haemolyticus] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus Y176 glutamate racemase (dga) gene complete cds.] [LE:263] [RE:1063] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24643836_c3_943 1807 5579 633 210 227 6.6e−19 Description pir:[LN:D69870] [AC:D69870:A36718] [PN:conserved hypothetical protein ykyA:hypothetical protein (aceA 5′ region)] [GN:ykyA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185047:g2633828] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykyA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:alternate gene name:ykrC; similar to hypothetical] [LE:131900] [RE:132517] [DI:direct] >gp:[GI:g3282141] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:ykrC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to Orf5 encoded by GenBank Accession] [LE:32388] [RE:33005] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24645025_c3_1012 1808 5580 1284 427 1287 3.1e−131 Description sp:[LN:PYRC_BACCL] [AC:P46538] [GN:PYRC] [OR:BACILLUS CALDOLYTICUS] [EC:3.5.2.3] [DE:DIHYDROOROTASE, (DHOASE)] [SP:P46538] [DB:swissprot] >pir:[LN:I40167] [AC:I40167:S34319] [PN:dihydroorotase,] [GN:pyrC] [CL:Bacillus dihydroorotase: Bacillus dihydroorotase homology] [OR:Bacillus caldolyticus] [EC:3.5.2.3] [DB:pir2] >gp:[GI:g312441] [LN:BCPYR] [AC:X73308] [PN:dihydroorotase] [GN:PyrC] [OR:Bacillus caldolyticus] [DB:genpept-bct1] [EC:3.5.2.3] [DE:B. caldolyticus pyrimidine biosynthesis genes.] [SP:P46538] [LE:1285] [RE:2568] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24648412_c1_798 1809 5581 402 133 302 7.4e−27 Description sp:[LN:YLXM_BACSU] [AC:P37104] [GN:YLXM] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 13.2 KD PROTEIN IN FFH 5′REGION] [SP:P37104] [DB:swissprot] >pir:[LN:A47154] [AC:A47154:A69882] [PN:conserved hypothetical protein ylxM] [GN:ylxM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185188:g2633969] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:ylxM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:72807] [RE:73139] [DI:direct] >gp:[GI:d1023083:g2424968] [LN:D14356] [AC:D14356] [PN:ORF1] [GN:orf1] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis orf1, ffh, rpsP genes for ORF1, Ffh and 30S ribosomal protein S16, complete cds.] [LE:365] [RE:697] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24652178_c2_847 1810 5582 477 158 174 2.7e−13 Description pir:[LN:F69930] [AC:F69930] [PN:conserved hypothetical protein yozB] [GN:yozB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185386:g2634307] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yozB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] [NT:similar to hypothetical proteins] [LE:85155] [RE:85691] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24730340_c3_937 1811 5583 672 223 731 2.6e−72 Description sp:[LN:YKQB_BACSU] [AC:P39760] [GN:YKQB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 24.3 KD PROTEIN IN KINC-ADEC INTERGENIC REGION (ORF4)] [SP:P39760] [DB:swissprot] >pir:[LN:A69862] [AC:A69862:PC6016] [PN:conserved hypothetical protein ykqB] [GN:ykqB] [CL:conserved hypothetical protein MG323] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1007628:g520844] [LN:BACAMOKOOO] [AC:D37799] [PN:orf4] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ampS, mreBH, orf1, kinC, orf3, orf4 and orf5.] [LE:5175] [RE:5840] [DI:direct] >gp:[GI:e1185041:g2633822] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykqB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:alternate gene name:ylxV, yzaC; similar to] [SP:P39760] [LE:125146] [RE:125811] [DI:direct] >gp:[GI:g3282136] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:ykqA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to product of orf4 encoded by GenBank] [LE:25634] [RE:26299] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24801713_c3_946 1812 5584 1314 437 1906 7.9e−197 Description sp:[LN:ODP2_STAAU] [AC:Q59821] [GN:PDHC] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.3.1.12] [DE:COMPLEX, (E2)] [SP:Q59821] [DB:swissprot] >pir:[LN:S19722] [AC:S19722] [PN:dihydrolipoamide S-acetyltransferase, chain E2] [CL:dihydrolipoamide acetyltransferase:lipoyl/biotin-binding homology] [OR:Staphylococcus aureus] [EC:2.3.1.12] [DB:pir2] >gp:[GI:g581570] [LN:SAPDHDNA] [AC:X58434:S73625] [PN:dihydrolipoamide acetyltransferase: subunit E2] [GN:pdhC] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:2.3.1.12] [DE:S. aureus pdhB, pdhC and pdhD genes for pyruvate decarboxylase, dihydrolipoamide acetyltransferase and dihydrolipoamidedehydrogenase.] [SP:Q59821] [LE:557] [RE:1849] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24806587_c2_848 1813 5585 1056 351 399 3.9e−37 Description pir:[LN:H69873] [AC:H69873] [PN:conserved hypothetical protein ylbC] [GN:ylbC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334771:g2339999] [LN:BS16823KB] [AC:Z98682] [PN:YlbC protein] [GN:ylbC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:11510] [RE:12550] [DI:direct] >gp:[GI:e1185086:g2633867] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins from B. subtilis] [LE:170993] [RE:1720331 [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_24851577_c3_971 1814 5586 564 187 405 9.0e−38 Description pir:[LN:E69874] [AC:E69874] [PN:conserved hypothetical protein ylbH] [GN:ylbH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334776:g2340004] [LN:BS16823KB] [AC:Z98682] [PN:YlbH protein] [GN:ylbH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:14650] [RE:15144] [DI:direct] >gp:[GI:e1185091:g2633872] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:174133] [RE:174627] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25425202_c1_749 1815 5587 522 173 196 1.3e−15 Description pir:[LN:B69985] [AC:B69985] [PN:hypothetical protein yshB] [GN:yshB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184109:g2635325] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yshB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:129072] [RE:129605] [DI:complement] >gp:[GI:e1165328:g1770034] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:yshB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:40302] [RE:40835] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25475250_c3_985 1816 5588 1827 608 2503 4.3e−260 Description pir:[LN:A27763] [AC:A27763:C69704] [PN:succinate dehydrogenase, flavoprotein:fumarate reductase:fumaric hydrogenase:succinic dehydrogenase] [GN:sdhA:sdhB] [CL:fumarate reductase flavoprotein:3-oxosteroid 1-dehydrogenase homology:fumarate reductase flavoprotein homology] [OR:Bacillus subtilis] [EC:1.3.99.1] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25509640_f1_185 1817 5589 240 79 75 0.0084 Description sp:[LN:YRUB_CLOPA] [AC:P23171] [OR:CLOSTRIDIUM PASTEURIANUM] [DE:(ORF B)] [SP:P23171] [DB:swissprot] >pir:[LN:S29118] [AC:S29118] [PN:hypothetical protein 2] [OR:Clostridium pasteurianum] [DB:pir2] >gp:[GI:g144907] [LN:CLORUB] [AC:M60116] [OR:Clostridium pasteurianum] [SR:C. pasteurianum (strain ATCC 6013) DNA] [DB:genpept-bct1] [DE:C. pasteurianum open reading frame A, B, C, and rubredoxin gene, complete cds.] [NT:open reading frame B] [LE:1126] [RE:1353] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25604677_c1_736 1818 5590 450 149 322 5.6e−29 Description pir:[LN:C69874] [AC:C69874] [PN:conserved hypothetical protein ylbF] [GN:ylbF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334774:g2340002] [LN:BS16823KB] [AC:Z98682] [PN:YlbF protein] [GN:ylbF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:13551] [RE:14000] [DI:direct] >gp:[GI:e1185089:g2633870] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:173034] [RE:173483] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25635962_c3_1008 1819 5591 486 161 274 6.9e−24 Description gp:[GI:e244971:g1340128] [LN:SA1234] [AC:X97985] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus orfs 1,2,3 & 4.] [NT:ORF1] [LE:537] [RE:1304] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25816552_c3_1004 1820 5592 777 258 984 4.0e−99 Description gp:[GI:g4009496] [LN:AF068904] [AC:AF068904] [PN:YlmH] [GN:ylmH] [OR:Staphylococcus aureus] [DB genpept-bct2] [DE Staphylococcus aureus cell division protein FtsZ (ftsZ) gene, partial cds; YlmD (ylmD), YlmE (ylmE), YlmF (ylmF), YlmG (ylmG), and YlmH (ylmH) genes, complete cds; and cell division protein DivIVA (divIVA) gene, partial cds.] [NT:similar to Bacillus subtilis YlmH] [LE:2865] [RE:3671] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25818811_c2_841 1821 5593 153 50 162 5.1e−12 Description gp:[GI:g1022725] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF2] [LE:394] [RE:1083] [DI:complement] >gp:[GI:g295162] [LN:STAMECRA] [AC:L14017] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) gene and unknown ORF, complete cds.] [NT:unknown ORF1; putative] [LE:1492] [RE:2181] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25939030_f2_399 1822 5594 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25972207_f1_6 1823 5595 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_25976401_f3_533 1824 5596 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_26354550_c1_740 1825 5597 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_26423305_c1_767 1826 5598 336 111 386 9.3e−36 Description gp:[GI:g4009495] [LN:AF068904] [AC:AF068904] [PN:YlmG] [GN:ylmG] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus cell division protein FtsZ (ftsZ) gene, partial cds; YlmD (ylmD), YlmE (ylmE), YlmF (ylmF), YlmG (ylmG), and YlmH (ylmH) genes, complete cds; and cell division protein DivIVA (divIVA) gene, partial cds.] [NT:similar to Bacillus subtilis YlmG] [LE:2492] [RE:2782] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_26597077_c2_875 1827 5599 1398 465 1113 8.5e−113 Description gp:[GI:g2149896] [LN:SAU94706] [AC:U94706] [PN:cell division protein] [GN:div1B] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:7179] [RE:8498] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_26598402_c3_1011 1828 5600 1314 437 1251 2.0e−127 Description sp:[LN:PYRP_BACCL] [AC:P41006] [GN:PYRP] [OR:BACILLUS CALDOLYTICUS] [DE:URACIL PERMEASE (URACIL TRANSPORTER)] [SP:P41006] [DB:swissprot] >pir:[LN:S38893] [AC:S38893] [PN:uracil transport protein:uracil permease] [CL:uracil transport protein uraA] [OR:Bacillus caldolyticus] [DB:pir2] >gp:[GI:g431231] [LN:BCPYRQP] [AC:X76083] [PN:uracil permease] [GN:pyrP] [OR:Bacillus caldolyticus] [DB:genpept-bct1] [DE:B. caldolyticus (DSM405) pyrR, pyrP and pyrB (partial) genes.] [SP:P41006] [LE:1490] [RE:2788] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_26614167_c1_795 1829 5601 240 79 238 4.5e−20 Description sp:[LN:ACP_BACSU] [AC:P80643:P51832] [GN:ACPA:ACPP] [OR:BACILLUS SUBTILIS] [DE:ACYL CARRIER PROTEIN (ACP)] [SP:P80643:P51832] [DB:swissprot] >pir:[LN:JC4822] [AC:JC4822:A69582 ] [PN:acyl carrier protein:8.5 K protein] [GN:acpA:srb] [CL:acyl carrier protein:acyl carrier protein homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185183:g2633964] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:acyl carrier protein] [GN:acpA] [FN:fatty acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:acpP] [SP:P80643] [LE:66316] [RE:66549] [DI:direct] >gp:[GI:d1011632:g1237013] [LN:D64116] [AC:D64116] [PN:ORF2] [GN:orf2] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ORF1, ORF2, ORF3, ORF4 and Srb, partial and complete cds.] [LE:140] [RE:373] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_26828187_f1_147 1830 5602 504 167 187 1.1e−14 Description pir:[LN:B69873] [AC:B69873] [PN:hypothetical protein ylaL] [GN:ylaL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185072:g2633853] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylaL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:155412] [RE:155897] [DI:complement] >gp:[GI:e324323:g2224771] [LN:BSZ97025] [AC:Z97025] [GN:ylaL] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis nprE, yla[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] and pycA genes.] [LE:9671] [RE:10156] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_2751260_f3_673 1831 5603 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_2766500_c3_938 1832 5604 153 50 113 2.8e−06 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_2789801_f2_436 1833 5605 366 121 163 1.2e−11 Description pir:[LN:D70070] [AC:D70070] [PN:transcription regulator homolog ywtF] [GN:ywtF] [CL:Bacillus subtilis probable transcription regulator yvhJ] [OR:Bacillus subtilis ] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_2835285_f3_466 1834 5606 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_29319086_c1_739 1835 5607 519 172 467 2.4e−44 Description pir:[LN:F69874] [AC:F69874] [PN:lipopolysaccharide core biosynthesis homolog ylbI] [GN:ylbI] [CL:lipopolysaccharide core biosynthesis protein kdtB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334777:g2340005] [LN:BS16823KB] [AC:Z98682] [PN:YlbI protein] [GN:ylbI] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:15208] [RE:15693] [DI:direct] >gp:[GI:e1185092:g2633873] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to lipopolysaccharide core biosynthesis] [LE:174691] [RE:175176] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_29320217_f2_271 1836 5608 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_29384818_c2_845 1837 5609 3465 1154 3900 0.0 Description pir:[LN:F69685] [AC:F69685] [PN:pyruvate carboxylase pycA] [GN:pycA] [CL:pyruvate carboxylase biotin carboxylase homology:lipoyl/biotin-binding homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185076:g2633857] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:pyruvate carboxylase] [GN:pycA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.4.1.1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:alternate gene name:ylaP] [LE:158800] [RE:162246] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_29410908_c2_867 1838 5610 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_29488551_f2_398 1839 5611 234 77 59 0.020 Description gp:[GI:g453389] [LN:BCU05814] [AC:U05814] [PN:cytochrome C oxidase subunit III] [GN:COIII] [FN:electron transport] [OR:Kinetoplast Blastocrithidia culicis] [SR:Blastocrithidia culicis] [DB:genpept-inv1] [DE:Blastocrithidia culicis ATCC30268 kinetoplast NADH dehydrogenase subunit 7 (ND7) gene, partial cds, and cytochrome C oxidase subunit III (COIII) gene, complete cds.] [LE:223] [RE:1089] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_30656300_c3_1030 1840 5612 1353 450 912 1.7e−91 Description sp:[LN:SUN_BACSU] [AC:P94464] [GN:SUN:FMU] [OR:BACILLUS SUBTILIS] [DE:SUN PROTEIN] [SP:P94464] [DB:swissprot] >pir:[LN:E69878] [AC:E69878] [PN:RNA-binding Sun protein homolog yloM] [GN:yloM] [CL:hypothetical protein HI0624] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185165:g2633946] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:sun; similar to RNA-binding] [SP:P94464] [LE:48918] [RE:50261] [DI:direct] >gp:[GI:e323504:g2337803] [LN:BSY13937] [AC:Y13937] [PN:putative Fmu protein] [GN:yloM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [SP:P94464] [LE:10690] [RE:12033] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_30663955_c2_809 1841 5613 1152 383 767 3.9e−76 Description sp:[LN:PURK_BACSU] [AC:P12045] [GN:PURK] [OR:BACILLUS SUBTILIS] [EC:4.1.1.21] [DE:(AIR CARBOXYLASE) (AIRC)] [SP:P12045] [DB:swissprot] >pir:[LN:DCBSPK] [AC:B29326:G69684] [PN:phosphoribosylaminoimidazole carboxylase, carbon dioxide-fixation chain:phosphoribosylaminoimidazole carboxylase chain II] [GN:purK] [CL:phosphoribosylaminoimidazole carboxylase carbon dioxide-fixation chain:phosphoribosylaminoimidazole carboxylase carbon dioxide-fixation chain homology] [OR:Bacillus subtilis] [EC:4.1.1.21] [DB:pir1] [MP:18 min] >gp:[GI:g143365] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosyl aminoimidazole carboxylase II] [LE:920] [RE:2059] [DI:direct] >gp:[GI:e1182623:g2632957] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylaminoimidazole carboxylase II] [GN:purK] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.1.21] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12045] [LE:97902] [RE:99041] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_30745680_f2_431 1842 5614 2007 668 2279 2.3e−236 Description sp:[LN:QOX1_BACSU] [AC:P34956] [GN:QOXB:IPA-38D] [OR:BACILLUS SUBTILIS] [EC:1.9.3.—] [DE:SUBUNIT QOXB) (OXIDASE AA(3) SUBUNIT 1)] [SP:P34956] [DB:swissprot] >pir:[LN:B38129] [AC:B38129:S39693:F69687] [PN:bo-type ubiquinol oxidase, chain I:cytochrome aa3 quinol oxidase chain I:quinol oxidase aa3-600] [GN:qoxB] [CL:cytochrome-c oxidase chain I:cytochrome-c oxidase chain I homology] [OR:Bacillus subtilis] [EC:1.10.3.—] [DB:pir2] >gp:[GI:g143397] [LN:BACQOXA] [AC:M86548] [PN:quinol oxidase] [GN:QOXB] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis AA3-600 quinol oxidase (QOXA, QOXB, QOXC, QOXD) genes, complete cds.] [LE:1846] [RE:3795] [DI:direct] >gp:[GI:g413962] [LN:BSGENR] [AC:X73124] [GN:ipa-38d qoxB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P34956] [LE:40298] [RE:42247] [DI:direct] >gp:[GI:e1186315:g2636351] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:cytochrome aa3 quinol oxidase (subunit I)] [GN:qoxB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:alternate gene name:ipa-38d] [SP:P34956] [LE:115715] [RE:117664] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_31272062_f1_183 1843 5615 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_32242890_f2_397 1844 5616 1701 566 1986 2.6e−205 Description sp:[LN:YKQC_BACSU] [AC:Q45493] [GN:YKQC] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 61.5 KD PROTEIN IN ADEC-PDHA INTERGENIC REGION] [SP:Q45493] [DB:swissprot] >pir:[LN:B69862] [AC:B69862] [PN:conserved hypothetical protein ykqC] [GN:ykqC] [CL:conserved hypothetical protein MG139] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185043:g2633824] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykqC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [SP:Q45493] [LE:127733] [RE:129400] [DI:complement] >gp:[GI:g3282138] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:ykqC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to aminopeptidase AMPS with Swiss-Prot] [LE:28221] [RE:29888] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_32667138_f1_135 1845 5617 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_32756_f3_601 1846 5618 1401 466 748 4.0e−74 Description pir:[LN:S62667] [AC:S62667] [PN:Nramp1 protein] [CL:natural resistance-associated macrophage protein 1] [OR:Oryza sativa] [SR:, rice] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_3314128_f2_238 1847 5619 234 77 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_33153_c2_834 1848 5620 900 299 454 5.8e−43 Description gp:GI:g4981938] [LN:AE001791] [AC:AE001791:AE000512] [PN:spermidine/putrescine ABC transporter, permease] [GN:TM1377] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 103 of 136 of the complete genome.] [NT:similar to GB:L42023 SP:P45170 PID:1007357] [LE:8884] [RE:9672] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_33367325_c1_706 1849 5621 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_33594187_c1_728 1850 5622 303 100 150 7.1e−10 Description gp:[GI:g2668605] [LN:AF015453] [AC:AF015453] [PN:unknown] [OR:Lactobacillus rhamnosus] [DB:genpept-bct2] [DE:Lactobacillus rhamnosus 6-phospho-beta-glucosidase homolog gene, partial cds; GNTR transcriptional regulator homolog and surface located protein genes, complete cds.] [NT:3.0E-ORF-1] [LE:2236] [RE:>3603] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_33595178_f3_476 1851 5623 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_33651636_c3_981 1852 5624 1776 951 1528 9.0e−157 Description pir:[LN:C69985] [AC:C69985] [PN:probable DNA-dependent DNA polymerase beta chain yshC] [GN:yshC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184108:g2635324] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yshC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to DNA polymerase beta] [LE:127286] [RE:128998] [DI:complement] >gp:[GI:e1165329:g1770035] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:yshC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:40909] [RE:42621] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34017812_f3_480 1853 5625 1722 573 1369 6.3e−140 Description pir:[LN:G69877] [AC:G69877] [PN:fibronectin-binding protein homolog yloA] [GN:yloA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e332190:g2462963] [LN:BSPYREYLO] [AC:AJ000974] [PN:putative fibronectin-binding protein] [GN:yloA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis pyrE to yloA gene region.] [NT:protein A-like] [LE:6297] [RE:8015] [DI:complement] >gp:[GI:e1185156:g2633937] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:similar to fibronectin-binding protein] [LE:37110] [RE:38828] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34100626_f3_494 1854 5626 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34175686_c1_686 1855 5627 513 170 502 4.7e−48 Description sp:[LN:PUR6_BACSU] [AC:P12044] [GN:PURE] [OR:BACILLUS SUBTILIS] [EC:4.1.1.21] [DE:(EC 4.1.1.21) (AIR CARBOXYLASE) (AIRC)] [SP:P12044] [DB:swissprot] >pir:[LN:DEBSPE] [AC:A29326:D69684] [PN:phosphoribosylaminoimidazole carboxylase, catalytic chain:phosphoribosylaminoimidazole carboxylase chain I] [GN:purE] [CL:phosphoribosylaminoimidazole carboxylase catalytic chain:phosphoribosylaminoimidazole carboxylase catalytic chain homology] [OR:Bacillus subtilis] [EC:4.1.1.21] [DB:pir1] [MP: 18 min] >gp:[GI:g143364] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosyl aminoimidazole carboxylase I] [LE:439] [RE:927] [DI:direct] >gp:[GI:e1182622:g2632956] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylaminoimidazole carboxylase I] [GN:purE] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.1.21] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12044] [LE:97421] [RE:97909] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34407750_f2_368 1856 5628 162 53 119 1.8e−07 Description pir:[LN:G69872] [AC:G69872] [PN:hypothetical protein ylaI] [GN:ylaI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185069:g2633850] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylaI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:153004] [RE:153213] [DI:complement] >gp:[GI:e324322:g2224768] [LN:BSZ97025] [AC:Z97025] [GN:ylaI] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis nprE, yla[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] and pycA genes.] [LE:7263] [RE:7472] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34642213_c2_877 1857 5629 615 204 681 5.1e−67 Description gp:[GI:g4009494] [LN:AF068904] [AC:AF068904] [PN:YlmF] [GN:ylmF] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus cell division protein FtsZ (ftsZ) gene, partial cds; YlmD (ylmD), YlmE (ylmE), YlmF (ylmF), YlmG (ylmG), and YlmH (ylmH) genes, complete cds; and cell division protein DivIVA (divIVA) gene, partial cds.] [NT:similar to Bacillus subtilis YlmF] [LE:1926] [RE:2480] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34644125_c2_876 1858 5630 1416 471 1792 9.5e−185 Description sp:[LN:FTSA_STAAU] [AC:O07325] [GN:FTSA] [OR:STAPHYLOCOCCUS AUREUS] [DE:CELL DIVISION PROTEIN FTSA] [SP:O07325] [DB:swissprot] >gp:[GI:g2149897] [LN:SAU94706] [AC:U94706] [PN:cell division protein] [GN:ftsA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:8604] [RE:10019] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34646937_c3_983 1859 5631 336 111 512 4.1e−49 Description gp:[GI:e1333201:g3776111] [LN:SATRXA] [AC:AJ223480] [PN:thioredoxin] [GN:trxA] [FN:thiol:disulfide interchange] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus trxA and uvrC genes and partial mutS and dhsC genes.] [LE:2334] [RE:2648] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_34650452_c1_782 1860 5632 225 74 87 0.00078 Description gp:[GI:g488925] [LN:A13473] [AC:A13473] [PN:41 kd antigen] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-pat] [DE:P. falciparum gene for 41 kd antigen, clone 41-14.] [LE:<1] [RE:>532] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_35285902_c2_859 1861 5633 150 49 46 0.042 Description sp:[LN:PGH2_MUSVI] [AC:O62725] [GN:PTGS2:COX2] [OR:MUSTELA VISON] [SR:,AMERICAN MINK] [EC:1.14.99.1] [DE:SYNTHASE 2) (PGH SYNTHASE 2) (PGHS-2) (PHS II)] [SP:O62725] [DB:swissprot] >gp:[GI:g2959708] [LN:AF047841] [AC:AF047841] [PN:prostaglandin synthase 2] [OR:Mustela vison] [SR:American mink] [DB:genpept-mam] [DE:Mustela vison prostaglandin synthase 2 mRNA, complete cds.] [NT:cyclooxygenase 2] [LE:11] [RE:1825] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_353427_f2_302 1862 5634 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_35365635_c2_846 1863 5635 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_35947191_c2_835 1864 5636 1155 384 149 6.3e−07 Description gp:[GI:g1633572] [LN:KSU52064] [AC:U52064] [OR:Kaposi's sarcoma-associated herpesvirus] [SR:Kaposi's sarcoma-associated herpesvirus - Human herpesvirus 8] [DB:genpept-vr1] [DE:Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene, complete cds.] [NT:Herpesvirus saimiri ORF73 homolog] [LE:1] [RE:3489] [DI:direct] >gp:[GI:g1718329] [LN:KSU75698] [AC:U75698] [OR:Kaposi's sarcoma-associated herpesvirus] [SR:Kaposi's sarcoma-associated herpesvirus - Human herpesvirus 8] [DB:genpept-vr1] [DE:Kaposi's sarcoma-associated herpesvirus long unique region, 80 putative ORF's and kaposin gene, complete cds.] [NT:ORF 73; extensive acidic domains, potential leucine] [LE:123809] [RE:127297] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_35978392_c1_788 1865 5637 2007 668 949 2.0e−95 Description pir:[LN:H69878] [AC:H69878] [PN:protein kinase homolog yloP] [GN:yloP] [CL:protein kinase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185168:g2633949] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to protein kinase] [LE:52121] [RE:54067] [DI:direct] >gp:[GI:e323506:g2337806] [LN:BSY13937] [AC:Y13937] [PN:putative Pkn2 protein] [GN:yloP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:13893] [RE:15839] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_35980062_f2_357 1866 5638 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36129451_c1_702 1867 5639 288 95 408 4.3e−38 Description sp:[LN:PTHP_STACA] [AC:P23534] [GN:PTSH] [OR:STAPHYLOCOCCUS CARNOSUS] [DE:PHOSPHOCARRIER PROTEIN HPR (HISTIDINE-CONTAINING PROTEIN)] [SP:P23534] [DB:swissprot] >pir:[LN:A42374] [AC:S15367:A42374] [PN:phosphotransferase system phosphohistidine-containing protein:phosphotransferase system HPr] [CL:phosphotransferase system phosphohistidine-containing protein:phosphotransferase system phosphohistidine-containing protein homology] [OR:Staphylococcus carnosus] [DB:pir1] >gp:[GI:g46908] [LN:SCPTSH] [AC:X60766] [PN:Histidine-containing protein (HPr)] [GN:ptsH] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:S. carnosus ptsH gene for histidine-containing protein (HPr).] [SP:P23534] [LE:270] [RE:536] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36141893_c3_1039 1868 5640 1248 415 1166 2.1e−118 Description gp:[GI:e1185186:g2633967] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:signal recognition particle (docking protein)] [GN:ftsY] [FN:involved in secretion of extracellular proteins] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:srb] [SP:P51835] [LE:71119] [RE:72108] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36142817_c1_717 1869 5641 1149 382 925 7.1e−93 Description pir:[LN:A70180] [AC:A70180] [PN:spermidine/putrescine ABC transporter, ATP-binding protein (potA) homolog] [CL:ATP-binding cassette homology] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2688562] [LN:AE001165] [AC:AE001165:AE000783] [PN:spermidine/putrescine ABC transporter,] [GN:BB0642] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 51 of 70) of the complete genome.] [NT:similar to GB:M64519 SP:P23858 PID:147326 GB:U00096] [LE:11911] [RE:12954] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36147150_c1_757 1870 5642 609 492 5.4e−47 Description pir:[LN:C69986] [AC:C69986] [PN:conserved hypothetical protein ysnA] [GN:ysnA] [CL:Methanococcus jannaschii conserved hypothetical protein MJ0226] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184085:g2635301] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysnA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [LE:104515] [RE:105111] [DI:complement] >gp:[GI:e1165357:g1770060] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysnA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:homology to ORFo197 of Escherichia coli; unknown] [LE:64796] [RE:65392] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36219187_c3_920 1871 5643 2208 735 2062 2.3e−213 Description sp:[LN:PURL_BACSU] [AC:P12042] [GN:PURL] [OR:BACILLUS SUBTILIS] [EC:6.3.5.3] [DE:SYNTHASE II)] [SP:P12042] [DB:swissprot] >pir:[LN:SYBS2G] [AC:G29326:C69685] [PN:phosphoribosylformylglycinamidine synthase, component II:formylglycinamide ribotide amidotransferase] [GN:purL] [CL:phosphoribosylformylglycinamidine synthase component II] [OR:Bacillus subtilis] [EC:6.3.5.3] [DB:pir1] [MP:18 min] >gp:[GI:g143369] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosylformyl glycinamidine synthetase II] [LE:5060] [RE:7288] [DI:direct] >gp:[GI:e1182628:g2632962] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylformylglycinamidine synthetase I] [GN:purQ] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.5.3] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12042] [LE:102042] II[RE:104270] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36445263_f2_320 1872 5644 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36520302_c2_870 1873 5645 189 62 250 2.4e−21 Description sp:[LN:YLLB_STAAU] [AC:O07319] [GN:YLLB] [OR:STAPHYLOCOCCUS AUREUS] [DE:HYPOTHETICAL 17.4 KD PROTEIN] [SP:O07319] [DB:swissprot] >gp:[GI:g2149890] [LN:SAU94706] [AC:U94706] [PN:unknown] [GN:yllB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:537] [RE:971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_36601687_c1_692 1874 5646 1260 419 1016 1.6e−102 Description sp:[LN:PUR2_BACSU] [AC:P12039] [GN:PURD] [OR:BACILLUS SUBTILIS] [EC:6.3.4.13] [DE:RIBONUCLEOTIDE SYNTHETASE) (PHOSPHORIBOSYLGLYCINAMIDE SYNTHETASE)] [SP:P12039] [DB:swissprot] >pir:[LN:AJBSAG] [AC:B29183:C69684] [PN:phosphoribosylamine--glycine ligase,:phosphoribosylglycinamide synthetase] [GN:purD] [CL:phosphoribosylamine--glycine ligase: phosphoribosylamine--glycine ligase homology] [OR:Bacillus subtilis] [EC:6.3.4.13] [DB:pir1] [MP:18 min] >gp:[GI:g2465561] [LN:AF011544] [AC:AF011544] [PN:phosphoribosylglycinamide synthetase] [GN:purD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis phosphoribosylaminoimidazole-carboxamideformyltransferase (purH-J) gene, partial cds, phosphoribosylglycinamide synthetase (purD), YecA (yecA), putative adenine deaminase (yecB), YecC (yecC), and YecD (yecD) genes, complete cds, and putative glutamate synthase (yecE) gene, partial cds.] [NT:identified by complementation of E. coli TX267,] [LE:263] [RE:1531] [DI:direct] >gp:[GI:g143374] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosyl glycinamide synthetase (PUR-D; gtg] [LE:11971] [RE:13239] [DI:direct] >gp:[GI:e1182633:g2632967] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylglycinamide synthetase] [GN:purD] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.4.13] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12039] [LE:108953] [RE:110221] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_3912890_f3_463 1875 5647 222 73 246 6.4e−21 Description sp:[LN:RL28_BACST] [AC:P23374] [GN:RPMB] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L28] [SP:P23374] [DB:swissprot] >pir:[LN:A48396] [AC:A48396] [PN:ribosomal protein L28] [CL:Escherichia coli ribosomal protein L28] [OR:Bacillus stearothermophilus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_3945257_f3_664 1876 5648 1176 391 738 4.6e−73 Description pir:[LN:E69687] [AC:E69687:A38129:S39692] [PN:cytochrome aa3 quinol oxidase (subunit II) qoxA:quinol oxidase aa3-600 chain qoxA] [GN:qoxA] [CL:bo-type ubiquinol oxidase chain II precursor:cytochrome-c oxidase chain II homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186316:g2636352] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:cytochrome aa3 quinol oxidase (subunit II)] [GN:qoxA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:alternate gene name:ipa-37d] [LE:117692] [RE:118657] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_3960881_f3_483 1877 5649 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_39808_f3_498 1878 5650 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_3992193_f3_496 1879 5651 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4067342_c3_977 1880 5652 1086 361 1267 4.1e−129 Description sp:[LN:SYFA_BACSU] [AC:P17921:P94539] [GN:PHES] [OR:BACILLUS SUBTILIS] [EC:6.1.1.20] [DE:-TRNA LIGASE ALPHA CHAIN) (PHERS)] [SP:P17921:P94539] [DB:swissprot] >pir:[LN:YFBSA] [AC:H69675:I40459:S11730] [PN:phenylalanine--tRNA ligase, alpha chain:phenylalanyl-tRNA synthetase alpha chain] [GN:pheS] [CL:phenylalanine--tRNA ligase alpha chain] [OR:Bacillus subtilis] [EC:6.1.1.20] [DB:pir1] >gp:[GI:e1184113:g2635329] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:phenylalanyl-tRNA synthetase (alpha subunit)] [GN:pheS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.20] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [SP:P17921] [LE:133410] [RE:134444] [DI:complement] >gp:[GI:e1165324:g1770030] [LN:BSZ75208] [AC:Z75208] [PN:phenylalany-tRNA synthetase beta subunit] [GN:pheS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.20] [DE:B. subtilis genomic sequence 89009bp.] [NT:phenylalanyl-tRNA synthetase beta subunit] [SP:P17921] [LE:35463] [RE:36497] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4103438_c3_970 1881 5653 255 84 110 1.6e−06 Description pir:[LN:D69874] [AC:D69874] [PN:conserved hypothetical protein ylbG] [GN:ylbG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334775:g2340003] [LN:BS16823KB] [AC:Z98682] [PN:YlbG protein] [GN:ylbG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:14055] [RE:14327] [DI:direct] >gp:[GI:e1185090:g2633871] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:173538] [RE:173810] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4298177_c1_776 1882 5654 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4300332_c1_700 1883 5655 1329 442 98 0.00059 Description gp:[GI:g5306148] [LN:AF160864] [AC:AF160864] [PN:orf365] [GN:orf365] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:Open reading frame ymf65 (CPGN); ATA initiation] [LE:15906] [RE:17003] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4306562_c1_760 1884 5656 306 101 469 1.5e−44 Description sp:[LN:YLLB_STAAU] [AC:O07319] [GN:YLLB] [OR:STAPHYLOCOCCUS AUREUS] [DE:HYPOTHETICAL 17.4 KD PROTEIN] [SP:O07319] [DB:swissprot] >gp:GI:g2149890] [LN:SAU94706] [AC:U94706] [PN:unknown] [GN:yllB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:537] [RE:971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4339053_c3_934 1885 5657 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4457788_f2_344 1886 5658 1716 571 285 5.3e−21 Description pir:[LN:D71623] [AC:D71623] [PN:erythrocyte membrane protein PfEMP3 PFB0095c] [GN:PFB0095c] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845093] [LN:AE001371] [AC:AE001371:AE001362] [PN:erythrocyte membrane protein PfEMP3] [GN:PFB0095c] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 8 of 73 of the complete sequence.] [NT:identified by sequence similarity] [LE:1407:8817] [RE:8621:8927] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4509661_c1_783 1887 5659 411 136 168 1.2e−12 Description gp:[GI:e1453986:g4835313] [LN:SC5H1] [AC:AL049863] [PN:hypothetical protein] [GN:SC5H1.10c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 5H1.] [NT:SC5H1.10c, hypothetical protein, len:160 aa;] [LE:8093] [RE:8575] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4532967_c3_982 1888 5660 2358 785 3159 0.0 Description gp:[GI:e1333200:g3776110] [LN:SATRXA] [AC:AJ223480] [PN:MutS-like protein] [GN:mutS] [FN:DNA mismatch repair protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus trxA and uvrC genes and partial mutS and dhsC genes.] [LE:<1] [RE:2161] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4696068_c1_741 1889 5661 186 61 237 5.7e−20 Description sp:[LN:RL32_BACST] [AC:P07840] [GN:RPMF] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L32 (RIBOSOMAL PROTEIN I) (BL37)] [SP:P07840] [DB:swissprot] >pir:[LN:R5BS37] [AC:S07236] [PN:ribosomal protein L32:ribosomal protein BL37:ribosomal protein I] [CL:Escherichia coli ribosomal protein L32] [OR:Bacillus stearothermophilus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4725000_c1_797 1890 5662 3636 1211 2426 6.2e−252 Description pir:[LN:G69708] [AC:G69708:JC4819:PC4029] [PN:chromosome segregation SMC protein:minichromosome stabilizing protein SMC] [GN:smc] [CL:conserved hypothetical P115 protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185185:g2633966] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:chromosome segregation SMC protein homolg] [GN:smc] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:alternate gene name:ylqA] [LE:67539] [RE:71099] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4725415_c2_873 1891 5663 2337 778 3205 0.0 Description gp:[GI:d1023422:g2463561] [LN:AB007500] [AC:AB007500:D28879] [PN:penicillin-binding protein 1] [GN:pbpA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:NCTC8325) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for penicillin-binding protein 1, MraY, MurD, partial and complete cds.] [LE:594] [RE:2828] [DI:direct] >gp:[GI:g2149893] [LN:SAU94706] [AC:U94706] [PN:penicillin-binding protein 1] [GN:pbpA] [OR:Staphylococcus aureus] [DB genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:2318] [RE:4552] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4741010_c3_956 1892 5664 846 281 650 9.8e−64 Description sp:[LN:SUHB_BACSU] [AC:Q45499] [GN:SUHB] [OR:BACILLUS SUBTILIS] [DE:EXTRAGENIC SUPPRESSOR PROTEIN SUHB HOMOLOG] [SP:Q45499] [DB:swissprot] >pir:[LN:E69864] [AC:E69864] [PN:myo-inositol-1(or 4)-monophosphatase homolog yktC] [GN:yktC] [CL:suppressor protein suhB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185057:g2633838] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:yktC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to myo-inositol-1(or 4)-monophosphatase] [SP:Q45499] [LE:142056] [RE:142853] [DI:direct] >gp:[GI:g3282150] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:yktC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to E. coli extragenic suppressor protein] [LE:42544] [RE:43341] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4741703_c2_894 1893 5665 2418 805 2153 5.3e−223 Description sp:[LN:PRIA_BACSU] [AC:P94461:O34941] [GN:PRIA] [OR:BACILLUS SUBTILIS] [DE:PRIMOSOMAL PROTEIN N′ (REPLICATION FACTOR Y)] [SP:P94461:O34941] [DB:swissprot] >pir:[LN:A69682] [AC:A69682] [PN:primosomal replication factor Y priA] [GN:priA] [CL:unassigned DEAD/H box helicases:DEAD/H box helicase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185162:g2633943] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:primosomal replication factor Y (primosomal] [GN:priA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [NT:alternate gene nam: yloJ] [SP:P94461] [LE:45047] [RE:47464] [DI:direct] >gp:[GI:e323502:g2337800] [LN:BSY13937] [AC:Y13937] [PN:putative PriA protein] [GN:yloJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [SP:P94461] [LE:6819] [RE:9236] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4769512_f2_349 1894 5666 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4781517_c2_888 1895 5667 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4859425_f2_276 1896 5668 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4875055_f1_23 1897 5669 225 74 74 0.015 Description sp:[LN:Y27B_METJA] [AC:P81234] [GN:MJ0275.1] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ0275.1] [SP:P81234] [DB:swissprot] >gp:[GI:g2826269] [LN:U67482] [AC:U67482:L77117] [PN:M. jannaschii predicted coding region MJ0275.1] [GN:MJ0275.1] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 24 of 150 of the complete genome.] [NT:Brute Force ORF; identified by GeneMark; putative] [LE:9344] [RE:9790] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4875327_f3_587 1898 5670 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4875452_c3_1034 1899 5671 645 214 521 4.6e−50 Description gp:[GI:g4982295] [LN:AE001811] [AC:AE001811:AE000512] [PN:ribulose-phosphate 3-epimerase] [GN:TM1718] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 123 of 136 of the complete genome.] [NT:similar to GB:L77117 SP:Q58093 PID:1591395 percent] [LE:2607] [RE:3269] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4876542_f1_176 1900 5672 633 210 551 3.0e−53 Description pir:[LN:D69862] [AC:D69862] [PN:formylmethionine deformylase homolog ykrB] [GN:ykrB] [CL:polypeptide deformylase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185046:g2633827] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykrB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to formylmethionine deformylase] [LE:130810] [RE:131364] [DI:complement] >gp:[GI:g3282140] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:ykrB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to polypeptide deformylase from Mycoplasma] [LE:31298] [RE:31852] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4877203_c1_793 1901 5673 936 311 661 6.7e−65 Description pir:[LN:H69620] [AC:H69620] [PN:malonyl CoA-acyl carrier protein transacylase fabD] [GN:fabD] [CL:[acyl-carrier-protein] S-malonyltransferase:[acyl-carrier-protein] S-malonyltransferase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185181:g2633962] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:malonyl CoA-acyl carrier protein transacylase] [GN:fabD] [FN:fatty acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.1.39] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:ylpE] [LE:64546] [RE:65499] [DI:direct] >gp:[GI:e323514:g2337819] [LN:BSY13937] [AC:Y13937] [PN:putative FabD protein] [GN:ylpE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:26318] [RE:27271] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4899187_f3_569 1902 5674 1149 382 402 1.9e−37 Description pir:[LN:B69875] [AC:B69875] [PN:conserved hypothetical protein ylbM] [GN:ylbM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e334781:g2340009] [LN:BS16823KB] [AC:Z98682] [PN:YlbM protein] [GN:ylbM] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 23.9 kB fragment.] [LE:18936] [RE:20183] [DI:complement] >gp:[GI:e1185096:g2633877] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylbM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:178419] [RE:179666] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_4970462_c2_904 1903 5675 750 249 837 1.5e−83 Description sp:[LN:FABG_BACSU] [AC:P51831:O31733] [GN:FABG] [OR:BACILLUS SUBTILIS] [EC:1.1.1.100] [DE:ACYL CARRIER PROTEIN REDUCTASE)] [SP:P51831:O31733] [DB:swissprot] >pir:[LN:A69621] [AC:A69621:PC4176] [PN:3-oxoacyl-[acyl-carrier-protein] reductase,:3-ketoacyl-acyl carrier protein reductase fabG:srb protein] [GN:fabG:srb] [CL:ribitol dehydrogenase:short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [EC:1.1.1.100] [DB:pir2] >gp:[GI:e1185182:g2633963] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:3-ketoacyl-acyl carrier protein reductase] [GN:fabG] [FN:fatty acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.100] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:ylpF] [SP:P51831] [LE:65492] [RE:66232] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5080260_f1_43 1904 5676 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5096012_f3_481 1905 5677 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5117162_c2_826 1906 5678 1023 340 925 7.1e−93 Description gp:[GI:d1039221:g4514629] [LN:AB016894] [AC:AB016894] [PN:bd-type quinol oxidase subunit II] [GN:cbdB] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain:K1041) DNA] [DB:genpept-bct1] [DE:Bacillus stearothermophilus genes for bd-type quinol oxidase subunit I and subunit II, complete cds.] [NT:cytochrome bd-type quinol oxidase] [LE:1706] [RE:2734] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5157963_f3_573 1907 5679 939 312 219 3.7e−22 Description pir:[LN:E69827] [AC:E69827] [PN:glycerophosphodiester phosphodiesterase homolog yhdW] [GN:yhdW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182963:g2633297] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to glycerophosphodiester phosphodiesterase] [LE:37668] [RE:38399] [DI:complement] >gp:[GI:e1191883:g2226218] [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdW] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees:spoVR to sspB.] [NT:Similarity to glycerol diester phosphodiesterase] [LE:24316] [RE:25047] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5162760_f3_514 1908 5680 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5276712_c3_1016 1909 5681 708 235 659 1.1e−64 Description sp:[LN:DCOP_LACLC] [AC:P50924] [GN:PYRF] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSP CREMORIS:STREPTOCOCCUS CREMORIS] [EC:4.1.1.23] [DE:DECARBOXYLASE)] [SP:P50924] [DB:swissprot] >gp:[GI:e264705:g1070361] [LN:LLCPYRDB] [AC:X74207] [PN:OMP decarboxylase] [GN:pyrF] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:L. lactis pyrD and pyrF genes.] [SP:P50924] [LE:5309] [RE:6022] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_595312_c1_733 1910 5682 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5974138_f1_158 1911 5683 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_5978453_c3_1029 1912 5684 492 163 261 1.6e−22 Description sp:[LN:DEF_BACSU] [AC:P94462] [GN:DEF] [OR:BACILLUS SUBTILIS] [EC:3.5.1.31] [DE:DEFORMYLASE)] [SP:P94462] [DB:swissprot] >pir:[LN:F69613] [AC:F69613] [PN:polypeptide deformylase def] [GN:def] [CL:polypeptide deformylase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e290287:g1772499] [LN:BSPRIADFS] [AC:Y10304] [PN:polypeptide deformylase] [GN:def] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis priA, def, fmt, sun genes.] [SP:P94462] [LE:1762] [RE:2244] [DI:direct] >gp:[GI:e1185163:g2633944] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:polypeptide deformylase] [GN:def] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.5.1.31] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name: yloK] [SP:P94462] [LE:47491] [RE:47973] [DI:direct] >gp:[GI:e323523:g2337801] [LN:BSY13937] [AC:Y13937] [PN:putative Def protein] [GN:yloK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [SP:P94462] [LE:9263] [RE:9745] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6023593_c1_730 1913 5685 288 95 296 3.2e−26 Description pir:[LN:D69873] [AC:D69873] [PN:hypothetical protein ylaN] [GN:ylaN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185074:g2633855] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ylaN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:157027] [RE:157308] [DI:direct] >gp:[GI:e1191897:g2224773] [LN:BSZ97025] [AC:Z97025] [GN:ylaN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis nprE, yla[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] and pycA genes.] [LE:11286] [RE:11567] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6072125_c1_766 1914 5686 672 223 857 1.1e−85 Description gp:[GI:g4009493] [LN:AF068904] [AC:AF068904] [PN:YlmE] [GN:ylmE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus cell division protein FtsZ (ftsZ) gene, partial cds; YlmD (ylmD), YlmE (ylmE), YlmF (ylmF), YlmG (ylmG),and YlmH (ylmH) genes, complete cds; and cell division protein DivIVA (divIVA) gene, partial cds.] [NT:similar to Bacillus subtilis YlmE] [LE:1246] [RE:1920] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6115700_f3_647 1915 5687 1404 467 356 7.8e−64 Description pir:[LN:H69858] [AC:H69858] [PN:cation ABC transporter (ATP-binding protei) homolog ykoD] [GN:ykoD] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181522:g2632042] [LN:BSAJ2571] [AC:AJ002571] [PN:YkoD] [GN:ykoD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [NT:homologous to cobalt transport ATP binding protein] [LE:41106] [RE:42578] [DI:complement] >gp:[GI:e1183342:g2633676] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykoD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to cation ABC transporter (ATP-binding] [LE:194055] [RE:195527] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6131693_c1_762 1916 5688 414 137 574 1.1e−55 Description gp:[GI:d1023421:g2463560] [LN:AB007500] [AC:AB007500:D28879] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:NCTC8325) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for penicillin-binding protein 1, MraY, MurD, partial and complete cds.] [NT:unnamed protein product] [LE:212] [RE:613] [DI:direct] >gp:[GI:g2149892] [LN:SAU94706] [AC:U94706] [PN:cell division protein] [GN:yllD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:1936] [RE:2337] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6149077_c3_1033 1917 5689 891 296 708 7.0e−70 Description pir:[LN:A69879] [AC:A69879] [PN:conserved hypothetical protein yloQ] [GN:yloQ] [CL:conserved hypothetical protein HI1714] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185169:g2633950] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:yloQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:similar to hypothetical proteins] [LE:54082] [RE:54978] [DI:direct] >gp:[GI:e323525:g2337807] [LN:BSY13937] [AC:Y13937] [PN:YloQ protein] [GN:yloQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:15854] [RE:16750] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_632762_f3_671 1918 5690 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_642_c3_1005 1919 5691 2784 927 4356 0.0 Description sp:[LN:SYI_STAAU] [AC:P41972] [GN:ILES] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.1.1.5] [DE:(ILERS)] [SP:P41972] [DB:swissprot] >pir:[LN:S40178] [AC:S40178] [PN:isoleucine--tRNA ligase,:isoleucyl-tRNA synthetase] [CL:isoleucine--tRNA ligase] [OR:Staphylococcus aureus] [EC:6.1.1.5] [DB:pir2] >gp:[GI:g437916] [LN:SAILES] [AC:X74219] [PN:isoleucyl-tRNA synthetase] [GN:ileS] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus gene for isoleucyl-tRNA synthetase.] [SP:P41972] [LE:91] [RE:2844] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6720452_c3_936 1920 5692 1356 451 1266 5.2e−129 Description gp:[GI:d1039220:g4514628] [LN:AB016894] [AC:AB016894] [PN:bd-type quinol oxidase subunit I] [GN:cbdA] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain:K1041) DNA] [DB:genpept-bct1] [DE:Bacillus stearothermophilus genes for bd-type quinol oxidase subunit I and subunit II, complete cds.] [NT:cytochrome bd-type quinol oxidase] [LE:363] [RE:1709] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6720655_f3_530 1921 5693 147 48 68 0.045 Description gp:[GI:g4049913] [LN:AF063866] [AC:AF063866] [PN:ORF MSV141 hypothetical protein] [GN:MSV141] [OR:Melanoplus sanguinipes entomopoxvirus] [DB:genpept-vr1] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:121430] [RE:121630] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_6834687_c2_831 1922 5694 309 102 209 5.3e−17 Description pir:[LN:C69864] [AC:C69864] [PN:hypothetical protein yktA] [GN:yktA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185054:g2633835] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:yktA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:140551] [RE:140817] [DI:direct] >gp:[GI:g3282148] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:unknown] [GN:yktA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [LE:41039] [RE:41305] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_7225000_c3_1038 1923 5695 1026 341 898 5.2e−90 Description pir:[LN:H69679] [AC:H69679] [PN:involved in fatty acid/phospholipid synthesis plsX] [GN:plsX] [CL:phospholipid synthesis protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185180:g2633961] [LN:BSUB0009] [AC:Z99112:AL009126] [GN:plsX] [FN:involved in fatty acid/phospholipid synthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21):from 1598421 to 1807200.] [NT:alternate gene name:ylpD] [LE:63526] [RE:64527] [DI:direct] >gp:[GI:e323529:g2337818] [LN:BSY13937] [AC:Y13937] [PN:putative PlsX protein] [GN:ylpD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA from the spoVM region.] [LE:25298] [RE:26299] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_7320465_c1_719 1924 5696 831 276 525 1.7e−50 Description pir:[LN:G70179] [AC:G70179] [PN:spermidine/putrescine ABC transporter, permease protein (potC) homolog] [CL:spermidine/putrescine transport system permease protein potI] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2688564] [LN:AE001165] [AC:AE001165:AE000783] [PN:spermidine/putrescine ABC transporter, permease] [GN:BB0640] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 51 of 70) of the complete genome.] [NT:similar to GB:M64519 SP:P23859 PID:147328 GB:U00096] [LE:10307] [RE:11098] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_867176_c3_924 1925 5697 1512 503 1090 2.3e−110 Description pir:[LN:C70468] [AC:C70468] [PN:phosphoribosylaminoimidazolecarboxamide formyltransferase] [GN:purH] [CL:purH bifunctional enzyme] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2984204] [LN:AE000765] [AC:AE000765:AE000657] [PN:phosphoribosylaminoimidazolecarboxamide] [GN:purH] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 97 of 109 of the complete genome.] [LE:7599] [RE:9119] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_892141_f2_303 1926 5698 396 131 281 1.2e−24 Description gp:[GI:e1487496:g5042304] [LN:MMU242955] [AC:AJ242955] [PN:hypothetical protein (P4(21)n)] [GN:P4(21)n] [OR:Mus musculus] [SR:house mouse] [DB:genpept-rod] [DE:Mus musculus partial mRNA for hypothetical protein (P4(21)n gene).] [NT:similar with amyh_yeast glucoamylase S1/S2] [LE:<1] [RE:1203] [DI:direct] >gp:[GI:d1042681:g5103287] [LN:AB028868] [AC:AB028868] [GN:P4(21)n] [OR:Mus musculus] [SR:Mus musculus mRNA] [DB:genpept] [DE:Mus musculus P4(21)n mRNA, partial cds.] [NT:The protein is similar with AMYH_YEAST GLUCOAMYLASE] [LE:<1] [RE:1203] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_892312_c3_980 1927 5699 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_968785_f2_361 1928 5700 939 312 1274 7.4e−130 Description gp:[GI:g3320606] [LN:AF072726] [AC:AF072726] [PN:putative heme A synthase] [GN:ctaA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus putative heme A synthase (ctaA) gene, complete cds.] [NT:CtaA] [LE:139] [RE:1050] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_968811_c1_753 1929 5701 651 216 599 2.5e−58 Description sp:[LN:DHSC_BACSU] [AC:P08064] [GN:SDHC] [OR:BACILLUS SUBTILIS] [DE:SUCCINATE DEHYDROGENASE CYTOCHROME B-558 SUBUNIT] [SP:P08064] [DB:Swissprot] >pir:[LN:DEBSSC] [AC:A29843:I39972:E69704] [PN:succinate dehydrogenase, cytochrome b558:fumarate reductase C protein] [GN:sdhC:sdhA] [CL:succinate dehydrogenase cytochrome b558] [OR:Bacillus subtilis] [EC:1.3.99.1] [DB:pir1] [MP:70] >gp:[GI:g143525] [LN:BACSDHAB] [AC:M13470:M15107] [OR:Bacillus subtilis] [SR:B. subtilis DNA, clone pKIM4] [DB:genpept-bct1] [DE:B. subtilis succinate dehydrogenase complex encoding cytochrome b-558 subunit, complete cds, and flavoprotein subunit, 5′ end.] [NT:succinate dehydrogenase cytochrome b-558 subunit] [LE:265] [RE:873] [DI:direct] >gp:[GI:e1184094:g2635310] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:succinate dehydrogenase (cytochrome b558] [GN:sdhC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21):from 2795131 to 3013540.] [SP:P08064] [LE:112102] [RE:112710] [DI:complement] >gp:[GI:e1165347:g1770051] [LN:BSZ75208] [AC:Z75208] [PN:cytochrome b558 subunit of succinate] [GN:sdhC] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.3.99.1] [DE:B. subtilis genomic sequence 89009bp.] [SP:P08064] [LE:57197] [RE:57805] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_969052_f2_434 1930 5702 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_9881927_f1_75 1931 5703 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_990702_c1_765 1932 5704 1185 394 1809 1.5e−186 Description sp:[LN:FTSZ_STAAU] [AC:P45498] [GN:FTSZ] [OR:STAPHYLOCOCCUS AUREUS] [DE:CELL DIVISION PROTEIN FTSZ] [SP:P45498] [DB:swissprot] >pir:[LN:S58814] [AC:S58814] [PN:cell division protein ftsZ] [CL:cell division protein ftsZ] [OR:Staphylococcus aureus] [DB:pir1] >gp:[GI:g458428] [LN:SAU06462] [AC:U06462] [PN:FtsZ] [GN:ftsZ] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus SA4 FtsZ (ftsZ) gene, complete cds.] [LE:27] [RE:1199] [DI:direct] >gp:[GI:g2149898] [LN:SAU94706] [AC:U94706] [PN:cell division protein] [GN:ftsZ] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus strain ATCC 8325-4 cell wall/cell division gene cluster, yllB, yllC, yllD, pbpA, mraY, murD, div1B, ftsA and ftsZ genes, complete cds.] [LE:10052] [RE:11224] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_9923437_f2_345 1933 5705 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_9925910_c2_813 1934 5706 597 198 430 2.0e−40 Description sp:[LN:PUR3_BACSU] [AC:P12040] [GN:PURN] [OR:BACILLUS SUBTILIS] [EC:2.1.2.2] [DE:TRANSFORMYLASE) (5′-PHOSPHORIBOSYLGLYCINAMIDE TRANSFORMYLASE)] [SP:P12040] [DB:swissprot] >pir:[LN:XYBSGF] [AC:I29326:B69685] [PN:phosphoribosylglycinamide formyltransferase,] [GN:purN] [CL:phosphoribosylglycinamide formyltransferase:phosphoribosylglycinamide formyltransferase homology] [OR:Bacillus subtilis] [EC:2.1.2.2] [DB:pir1] [MP:18 min] >gp:[GI:g143372] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:phosphoribosyl glycinamide formyltransferase] [LE:9833] [RE:10420] [DI:direct] >gp:[GI:e1182631:g2632965] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:phosphoribosylglycinamide formyltransferase] [GN:purN] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.1.2.2] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [SP:P12040] [LE:106815] [RE:107402] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_9933463_c3_933 1935 5707 1188 395 897 6.6e−90 Description sp:[LN:YWBD_BACSU] [AC:P39587] [GN:YWBD:IPA-19D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 44.4 KD PROTEIN IN EPR-GALK INTERGENIC REGION] [SP:P39587] [DB:swissprot] >pir:[LN:S39674] [AC:S39674:B70051] [PN:ywbD] protein:hypothetical protein ipa-19d] [GN:ywbD] [CL:probable methyltransferase b0967] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413943] [LN:BSGENR] [AC:X73124] [GN:ipa-19d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39587] [LE:20551] [RE:21741] [DI:direct] >gp:[GI:e1186335:g2636371] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywbD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-19d; similar to] [SP:P39587] [LE:136218] [RE:137408] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000990_9954640_f3_487 1936 5708 228 75 117 3.0e−07 Description gp:[GI:g2196686] [LN:EFU25090] [AC:U25090] [PN:pyrimidine biosynthesis protein Ab] [GN:pyrAb] [OR:Enterococcus faecalis] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pKV48 pyrimidine biosynthesis protein Ab (pyrAb) gene, partial cds.] [LE:<1] [RE:>253] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_10928_f1_70 1937 5709 1242 413 238 1.4e−17 Description pir:[LN:T03492] [AC:T03492] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:pir2] [MP:1] >gp:[GI:g3128293] [LN:AF010496] [AC:AF010496] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:genpept-bct2] [DE:Rhodobacter capsulatus strain SB1003, partial genome.] [LE:54291] [RE:55613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_10948587_c1_430 1938 5710 822 273 757 4.5e−75 Description gp:[GI:g4160468] [LN:AF109909] [AC:AF109909] [PN:putative protein] [GN:ykoY] [OR:Bacillus megaterium] [DB:genpept-bct2] [DE:Bacillus megaterium polyhydroxyalkanoate gene cluster, complete sequence.] [NT:similar to toxic anion resistance protein] [LE:277] [RE:1092] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_11210760_f2_261 1939 5711 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_11220301_c2_523 1940 5712 126 41 108 3.4e−06 Description pir:[LN:QQSA8T] [AC:A04493] [PN:hypothetical protein B-189] [OR:Staphylococcus aureus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_1180328_c3_606 1941 5713 816 271 372 2.8e−34 Description pir:[LN:H70003] [AC:H70003] [PN:probable prolyl aminopeptidase, ytxM:cytosol aminopeptidase V:Pro-X aminopeptidase:proline aminopeptidase:proline iminopeptidase] [GN:ytxM] [OR:Bacillus subtilis] [EC:3.4.11.5] [DB:pir2] >gp:[GI:e1185954:g2635565] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytxM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:alternate gene name:ytfB; similar to prolyl] [LE:151061] [RE:151885] [DI:complement] >gp:[GI:g2293147] [LN:AF008220] [AC:AF008220] [PN:YtxM] [GN:ytxM] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity with 2-hydroxy-6-oxo-2,4-heptadienoate] [LE:28542] [RE:29366] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_12239817_c2_520 1942 5714 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_12681510_f3_365 1943 5715 825 274 702 3.0e−69 Description pir:[LN:F69841] [AC:F6984l] [PN:conserved hypothetical protein yitU] [GN:yitU] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e261990:g1620926] [LN:BS168NPRB] [AC:Z79580] [GN:putative orf] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis nprB gene.] [LE:4492] [RE:5304] [DI:complement] >gp:[GI:e1183116:g2633450] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yitU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:190463] [RE:191275] [DI:complement] >gp:[GI:e1173548:g2145415] [LN:BSY09476] [AC:Y09476] [PN:YitU] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54 kb genomic DNA fragment.] [NT:putative ORF] [LE:47689] [RE:48501] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_12750290_c1_400 1944 5716 1122 373 1233 1.6e−125 Description pir:[LN:B69669] [AC:B69669:S15233:D38447] [PN:oligopeptide transport ATP-binding protein oppD:sporulation initiation protein spo0KD] [GN:spo0KD:oppD] [CL:inner membrane protein malK:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183166:g2633500] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:oligopeptide ABC transporter (ATP-binding] [GN:oppD] [FN:required for initiation of sporulation,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:alternate gene name: spo0KD] [LE:28537] [RE:29613] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_13089052_f3_290 1945 5717 240 79 112 1.0e−06 Description pir:[LN:A60998] [AC:A60998] [PN:replication protein REP] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g295834] [LN:SAPOX2000] [AC:X55798] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pOX2000.] [NT:ORF 154] [LE:587] [RE:1051] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_13829403_f1_46 1946 5718 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_13848387_f2_141 1947 5719 240 79 131 9.8e−09 Description pir:[LN:S75993] [AC:S75993] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1011491:g1001353] [LN:SYCSLLLH] [AC:D64006:AB001339] [PN:hypothetical protein] [GN:clpP] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 25/27, 3138604–3270709.] [NT:ORF_ID:s110498] [LE:80076] [RE:80528] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_1445930_f2_152 1948 5720 621 206 103 0.0023 Description pir:[LN:A70417] [AC:A70417] [PN:hypothetical protein aq_1349] [GN:aq_1349] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983776] [LN:AE000736] [AC:AE000736:AE000657] [PN:putative protein] [GN:aq_1349] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 68 of 109 of the complete genome.] [LE:1950] [RE:2756] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_14460882_c1_443 1949 5721 1722 573 1304 4.9e−133 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_14460887_f1_3 1950 5722 153 50 115 1.7e−06 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_14484553_c2_467 1951 5723 1356 451 1726 9.3e−178 Description sp:[LN:G6PA_BACST] [AC:P13375] [GN:PGIA] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:5.3.1.9] [DE:ISOMERASE A)] [SP:P13375] [DB:swissprot] >pir:[LN:NUBSSA] [AC:S15936:S06196] [PN:glucose-6-phosphate isomerase, A:phosphoglucose isomerase:phosphohexose isomerase] [CL:glucose-6-phosphate isomerase] [OR:Bacillus stearothermophilus] [EC:5.3.1.9] [DB:pir1] >gp:[GI:g40046] [LN:BSPGIA] [AC:X16639] [OR:Bacillus stearothermophilus] [DB:genpept-bct1] [DE:Bacillus stearothermophilus pgiA gene for phosphoglucoisomeraseisoenzyme A (EC 5.3.1.9).] [NT:phosphoglucose isomerase A (AA 1–449)] [SP:P13375] [LE:95] [RE:1444] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_14648512_c3_585 1952 5724 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_14656432_c3_582 1953 5725 168 55 78 0.033 Description gp:[GI:g3158514] [LN:CELT04D1] [AC:AF067617] [GN:T04D1.2] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid T04D1.] [LE:10425:10567:11420:12480] [RE:10517:10646:11689:12789] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_14884437_c1_437 1954 5726 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_15038450_c2_469 1955 5727 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_16683437_f1_5 1956 5728 1023 340 571 2.3e−55 Description pir:[LN:A69863] [AC:A69863] [PN:conserved hypothetical protein ykrP] [GN:ykrP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184942:g2633723] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykrP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:22614] [RE:23636] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_16832562_f1_67 1957 5729 804 267 320 4.5e−36 Description pir:[LN:H69843] [AC:H69843] [PN:hypothetical protein yjbH] [GN:yjbH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183175:g2633509] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:38695] [RE:39522] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_187683_c1_417 1958 5730 228 75 256 1.3e−23 Description sp:[LN:BIN3_STAAU] [AC:P20384] [GN:BIN3] [OR:STAPHYLOCOCCUS AUREUS] [DE:POTENTIAL DNA-INVERTASE BIN3 (TRANSPOSON TN552)] [SP:P20384] [DB:swissprot] >gp:[GI:g398182] [LN:SABINR3] [AC:X16298] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus plasmid pI9789 DNA with binR and bin3 genes, derived from transposon TN552.] [NT:bin3 product] [SP:P20384] [LE:1049] [RE:1657] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_195177_c2_521 1959 5731 141 46 127 2.6e−08 Description pir:[LN:S42239] [AC:S42239] [PN:hypothetical protein 3] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g501834] [LN:PNS1CG] [AC:M16217] [OR:Plasmid pNS1] [SR:Plasmid pNS1 from Staphylococcus aureus, plasmid pTP5 DNA] [DB:genpept-bct1] [DE:Plasmid pNS1 (from Staphylococcus aureus) encoding tetracycline-resistance (tet), complete genome.] [NT:ORF C; putative] [LE:1870] [RE:2409] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_19531626_f3_304 1960 5732 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_19547938_c2_498 1961 5733 372 123 224 7.4e−18 Description sp:[LN:G6PD_LEUME] [AC:P11411] [GN:ZWF] [OR:LEUCONOSTOC MESENTEROIDES] [EC:1.1.1.49] [DE:GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE, (G6PD)] [SP:P11411] [DB swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_19566553_c1_428 1962 5734 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_1960952_c2_473 1963 5735 906 301 575 8.7e−56 Description pir:[LN:C69837] [AC:C69837] [PN:5-oxo-1,2,5-tricarboxilic-3-penten acid de homolog yisK] [GN:yisK] [CL:2-hydroxyhepta-2,4-diene-1,7-dioate isomerase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183077:g2633411] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yisK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to 5-oxo-1,2,5-tricarboxilic-3-penten acid] [LE:152216] [RE:153121] [DI:direct] >gp:[GI:e1173509:g2145376] [LN:BSY09476] [AC:Y09476] [PN:YisK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54 kb genomic DNA fragment.] [NT:putative - Homology with oxo-tricarboxilic-pentene] [LE:9442] [RE:10347] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_19610442_f1_56 1964 5736 246 81 219 4.6e−18 Description gp:[GI:d1045996:g5360820] [LN:D86934] [AC:D86934] [PN:transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N026; putative] [LE:19527] [RE:19751] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_19790902_c2_493 1965 5737 813 270 919 3.1e−92 Description pir:[LN:F69844] [AC:F69844] [PN:conserved hypothetical protein yjbN] [GN:yjbN] [CL:conserved hypothetical protein HI0072] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183181:g2633515] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to hypothetical proteins] [LE:42741] [RE:43541] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_20517062_c2_478 1966 5738 1002 333 961 1.1e−96 Description pir:[LN:F69842] [AC:F69842] [PN:3-oxoacyl-acyl-carrier protein synthase homolog yjaX] [GN:yjaX] [CL:3-oxoacyl-[acyl-carrier-protein] synthase III] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183136:g2633470] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yjaX] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to 3-oxoacyl- acyl-carrier protein] [LE:208189] [RE:209127] [DI:direct] >gp:[GI:e1183153:g2633487] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjaX] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to 3-oxoacyl- acyl-carrier protein] [LE:13299] [RE:14237] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_20585302_f2_149 1967 5739 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_20739037_c1_452 1968 5740 426 141 690 5.7e−68 Description gp:[GI:g2267243] [LN:SEU71377] [AC:U71377] [PN:putative transcriptional regulator AtlR] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds.] [LE:6867] [RE:7286] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_2125903_f3_313 1969 5741 1239 412 197 6.2e−13 Description pir:[LN:D71112] [AC:D71112] [PN:hypothetical protein PH0667] [GN:PH0667] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030701:g3257075] [LN:AP000003] [AC:AP000003:AB009484:AB009485:AB009486:AB009487:AB009488:AB009489] [PN:413aa long hypothetical protein] [GN:PH0667] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 544001–777000 nt. position(3/7).] [LE:51915] [RE:53156] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_21571937_f3_380 1970 5742 213 70 54 0.015 Description pir:[LN:F71120] [AC:F71120] [PN:hypothetical protein PH0733] [GN:PH0733] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030767:g3257141] [LN:AP000003] [AC:AP000003:AB009484:AB009485:AB009486:AB009487:AB009488:AB009489] [PN:150aa long hypothetical protein] [GN:PH0733] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 544001–777000 nt. position(3/7).] [LE:107943] [RE:108395] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_21594202_f2_167 1971 5743 1176 391 1674 3.0e−172 Description gp:[GI:e1301685:g3256224] [LN:SAY14370] [AC:Y14370] [GN:ypfP] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus RF3, murE, ypfP genes.] [LE:5160] [RE:6335] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_21753125_c2_481 1972 5744 1194 397 664 2.0e−79 Description pir:[LN:S16649] [AC:S16649:S18271:E69618:I40001] [PN:dipeptide ABC transporter (permease):dciAC protein] [GN:dppC:dciAC] [CL:oligopeptide permease protein oppB] [OR:Bacillus subtilis] [DB:pir2] >gp:[G1:e1181495:g2632015] [LN:BSAJ2571] [AC:AJ002571] [PN:DppC] [GN:dppC] [FN:ABC-type dipeptide transport system] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:14301] [RE:15263] [DI:direct] >gp:[GI:e1183314:g2633648] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:dipeptide ABC transporter (permease)] [GN:dppC] [OR:Bacillus siibtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:alternate gene name:dciAC] [LE:167250] [RE:168212] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_22272583_f3_291 1973 5745 123 40 86 0.0040 Description gp:[GI:g4098413] [LN:LOU77495] [AC:U77495] [PN:putative integrase] [GN:int] [OR:Leuconostoc oenos bacteriophage 10MC] [DB:genpept-phg] [DE:Leuconostoc oenos bacteriophage 10MC putative integrase (int) gene, complete cds.] [NT:site-specific recombinase] [LE:119] [RE:1165] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_22456512_f3_286 1974 5746 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_22462787_c1_392 1975 5747 525 174 535 1.5e−51 Description sp:[LN:LEPH_STAAU] [AC:P72364] [GN:SPSA] [OR:STAPHYLOCOCCUS AUREUS] [DE:INACTIVE SIGNAL PEPTIDASE IA] [SP:P72364] [DB:swissprot] >gp:[GI:g1595809] [LN:SAU65000] [AC:U65000] [PN:type-I signal peptidase SpsA] [GN:spsA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus type-I signal peptidase SpsA (spsA) gene, and type-I signal peptidase SpsB (spsB) gene, complete cds.] [NT:inactive signal peptidase homologue; protein lacks] [LE:40] [RE:564] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_22665887_c3_598 1976 5748 129 42 120 2.4e−07 Description pir:[LN:D69838] [AC:D69838] [PN:conserved hypothetical protein yisU] [GN:yisU] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183088:g2633422] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yisU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:165981] [RE:166643] [DI:complement] >gp:[GI:e1173520:g2145387] [LN:BSY09476] [AC:Y09476] [PN:YisU] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54 kb genomic DNA fragment.] [NT:putative] [LE:23207] [RE:23869] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_22703588_f2_137 1977 5749 954 317 803 6.0e−80 Description sp:[LN:MENA_BACSU] [AC:P39582] [GN:MENA:IPA-6D] [OR:BACILLUS SUBTILIS] [EC:2.5.1.—] [DE:(DHNA-OCTAPRENYLTRANSFERASE)] [SP:P39582] [DB:swissprot] >pir:[LN:S39661] [AC:S39661:B70050] [PN:menaquinone biosynthesis protein homolog ywaB:protein ipa-6d] [GN:ywaB] [CL:quinone biosynthesis homolog ywaB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413930] [LN:BSGENR] [AC:X73124] [GN:ipa-6d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39582] [LE:5904] [RE:6839] [DI:direct] >gp:[GI:e1186348:g2636384] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywaB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:alternate gene name:ipa-6d; similar to quinone] [SP:P39582] [LE:151120] [RE:152055] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23438827_c3_566 1978 5750 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23535910_c1_391 1979 5751 603 200 499 9.8e−48 Description gp:[GI:g4185300] [LN:AF089862] [AC:AF089862] [PN:unknown] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus type-I signal peptidase SipA (sipA) and type-I signal peptidase SipB (sipB) genes, complete cds; and unknown gene.] [NT:Orf1; similar to Bacillus subtilis yhjE] [LE:271] [RE:948] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23593932_f2_166 1980 5752 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23611563_c3_600 1981 5753 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23625637_c2_526 1982 5754 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23634641_c1_398 1983 5755 1248 415 1475 3.7e−151 Description pir:[LN:G69842] [AC:G69842] [PN:3-oxoacyl-[acyl-carrier-protein] synthase,] [GN:yjaY] [CL:3-oxoacyl-[acyl-carrier-protein] synthase I: 3-oxoacyl-[acyl-carrier-protein] synthase I homology] [OR:Bacillus subtilis] [EC:2.3.1.41] [DB:pir2] >gp:[GI:e1183137:g2633471] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yjaY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to 3-oxoacyl- acyl-carrier protein] [LE:209150] [RE:210391] [DI:direct] >gp:[GI:e1183154:g2633488] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjaY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to 3-oxoacyl- acyl-carrier protein] [LE:14260] [RE:15501] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_23678800_c3_561 1984 5756 399 132 395 1.0e−36 Description pir:[LN:H69841] [AC:H69841] [PN:conserved hypothetical protein yitW] [GN:yitW] [CL:conserved hypothetical protein MJ1129] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e261991:g1620928] [LN:BS168NPRB] [AC:Z79580] [GN:putative orf] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis nprB gene.] [LE:6256] [RE:6564] [DI:direct] >gp:[GI:e1183118:g2633452] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yitW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:192227] [RE:192535] [DI:direct] >gp:[GI:e1173550:g2145417] [LN:BSY09476] [AC:Y09476] [PN:YitW] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54 kb genomic DNA fragment.] [NT:putative orf] [LE:49453] [RE:49761] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_2392300_f2_176 1985 5757 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24022191_f2_232 1986 5758 222 73 97 3.9e−05 Description pir:[LN:G69854] [AC:G69854] [PN:hypothetical protein yjzD] [GN:yjzD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183130:g2633464] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yjzD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [LE:204697] [RE:204882] [DI:complement] >gp:[GI:e1183147:g2633481] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjzD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [LE:9807] [RE:9992] [DI:complement] >gp:[GI:d1023798:g2564027] [LN:D86376] [AC:D86376] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:CU741) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis ArgF and med genes, partial and complete cds.] [NT:unnamed protein product] [LE:1027] [RE:1212] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24024142_c2_496 1987 5759 315 104 93 0.00010 Description gp:[GI:g2654481] [LN:BFU89914] [AC:U89914] [PN:hypothetical 10.1 kDa protein] [OR:Bacillus firmus] [DB:genpept-bct2] [DE:Bacillus firmus hypothetical 34.0 kDa protein, hypothetical 8.9 kDa protein, hypothetical 10.1 kDa protein, hypothetical 21.0 kDa protein, putative thiosulfate sulfur transferase, hypothetical 16.1 kDa transcriptional regulator and hypothetical 18.2 kDa protein genes, complete cds, and Na+/H+ antiporter homolog gene, partial cds.] [NT:orf4] [LE:1601] [RE:1882] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24070137_c3_602 1988 5760 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24105342_c1_448 1989 5761 831 276 1242 1.8e−126 Description pir:[LN:F69656] [AC:F69656:A42715:S27512] [PN:naphthoate synthase, menB:DHNA synthase:dihydroxynaphthoate synthase:dihydroxynapthoic acid synthetase menB:menaquinone biosynthesis enzyme/enoyl CoA hydratase homolog] [GN:menB] [CL:naphthoate synthase:enoyl-CoA hydratase homology] [OR:Bacillus subtilis] [EC:4.1.3.36] [DB:pir2] >gp:[GI:e1185953:g2635564] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:dihydroxynapthoic acid synthetase] [GN:menB] [FN:menaquinone biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.3.36] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [LE:150211] [RE:151026] [DI:complement] >gp:[GI:g2293148] [LN:AF008220] [AC:AF008220] [PN:dihydroxynaphthoate synthase] [GN:menB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:29401] [RE:30216] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24225010_c2_536 1990 5762 168 55 Description NO-HIT AI7503000991_24270451_c1_432 1991 5763 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24409428_c1_438 1992 5764 258 85 357 1.1e−32 Description gp:[GI:g1731452] [LN:SAU38429] [AC:U38429] [PN:recombination protein] [GN:pre] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus chloramphenicol resistance plasmid pKH7, complete sequence.] [LE:2074] [RE:3285] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24412517_c3_581 1993 5765 393 130 213 1.2e−16 Description sp:[LN:G6PD_BACSU] [AC:P54547] [GN:ZWF] [OR:BACILLUS SUBTILIS] [EC:1.1.1.49] [DE:PROTEIN 11) (VEG11)] [SP:P54547] [DB:swissprot] >pir:[LN:B69964] [AC:B69964] [PN:probable glucose-6-phosphate 1-dehydrogenase, yqjJ] [GN:yqjJ] [CL:glucose-6-phosphate dehydrogenase] [OR:Bacillus subtilis] [EC:1.1.1.49] [DB:pir2] >gp:[GI:d1013296:g1303961] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:239025] [RE:240494] [DI:complement] >gp:[GI:e1185654:g2634820] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to glucose-S-phosphate 1-dehydrogenase] [SP:P54547] [LE:83125] [RE:84594] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24415632_c1_393 1994 5766 579 192 827 1.7e−82 Description sp:[LN:LEP_STAAU] [AC:P72365] GN:SPSB] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.4.21.89] [DE:SIGNAL PEPTIDASE IB, (SPASE IB) [LEADER PEPTIDASE IB)] [SP:P72365] [DB:swissprot] >gp:[GI:g1595810] [LN:SAU65000] [AC:U65000] [PN:type-I signal peptidase SpsB] [GN:spsB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus type-I signal peptidase SpsA (spsA) gene, and type-I signal peptidase SpsB (spsB) gene, complete cds.] [NT:signal peptidase, leader peptidase, serine] [LE:580] [RE:1155] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24416702_f2_125 1995 5767 4008 1335 7001 0.0 Description gp:[GI:g2267242] [LN:SEU71377] [AC:U71377] [PN:autolysin AtlE] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds.] [NT:primary attachment to a polystyrene surface] [LE:2620] [RE:6627] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24428543_f3_297 1996 5768 174 57 72 0.017 Description gp:[GI:g153715] [LN:STRMLIKEE] [AC:L05021] [PN:M-like protein] [OR:Streptococcus pyogenes] [SR:Streptococcus pyogenes DNA] [DB:genpept-bct1] [DE:Streptococcus pyogenes M-like protein gene, partial cds.] [LE:<1] [RE:>243] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24475252_f3_289 1997 5769 159 52 Description NO-HIT AI7503000991_24646886_c3_594 1998 5770 1557 518 296 2.0e−23 Description pir:[LN:B71973] [AC:B71973] [PN:2′,3′-cyclic-nucleotide 2′-phosphodiesterase] [GN:cpdB] [CL:2′,3′-cyclic-nucleotide 2′-phosphodiesterase:2′,3′-cyclic-nucleotide 2′-phosphodiesterase homology:phosphoesterase core homology] [OR:Helicobacter pylori] [SR:strain J99, , strain J99] [SR:strain J99,] [DB:pir2] >gp:[GI:g4154615] [LN:AE001449] [AC:AE001449:AE001439] [PN:2′,3′-CYCLIC-NUCLEOTIDE 2′-PHOSPHODIESTERASE] [GN:cpdB] [OR:Helicobacter pylori J99] [DB:genpept-bct2] [DE:Helicobacter pylori, strain J99 section 10 of 132 of the complete genome.] [NT:similar to H. pylori 26695 gene HP0104] [LE:139] [RE:1884] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24648412_c1_406 1999 5771 642 213 683 3.1e−67 Description pir:[LN:E69844] [AC:E69844] [PN:GTP pyrophosphokinase homolog yjbM] [GN:yjbM] [CL:GTP pyrophosphokinase related protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183180:g2633514] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to GTP pyrophosphokinase] [LE:42087] [RE:42722] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24745437_c3_539 2000 5772 1263 420 1659 1.2e−170 Description sp:[LN:YPCA_BACSU] [AC:P50735] [GN:YPCA] [OR:BACILLUS SUBTILIS] [EC:1.4.1.—] [DE:(EC 1.4.1.—)] [SP:P50735] [DB:swissprot] >pir:[LN:G69933] [AC:G69933] [PN:glutamate dehydrogenase homolog ypcA] [GN:ypcA] [CL:glutamate dehydrogenase (NAD(P)+)] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183741:g2634714] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:ypcA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [NT:similar to glutamate dehydrogenase] [SP:P50735] [LE:205764] [RE:207044] [DI:complement] >gp:[GI:e1185565:g2634731] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:ypcA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [NT:similar to glutamate dehydrogenase] [SP:P50735] [LE:6044] [RE:7324] [DI:complement] >gp:[GI:g1146206] [LN:BACSERA] [AC:L47648] [PN:glutamate dehydrogenase] [GN:ypcA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA, ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependent glycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [NT:similar to Clostridium difficile glutamate] [LE:9353] [RE:10633] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_24804677_c3_597 2001 5773 366 121 117 1.5e−06 Description gp:[GI:g2541936] [LN:PSU27310] [AC:U27310] [PN:unknown] [OR:Pseudomonas syringae] [DB:genpept-bct2] [DE:Pseudomonas syringae phaseolotoxin gene cluster, complete sequence.] [NT:ORF6; similar to Pseudomonas syringae fatty acid] [LE:5079] [RE:6062] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_25392826_f2_175 2002 5774 1146 381 557 7.0e−54 Description pir:[LN:G70007] [AC:G70007] [PN:conserved hypothetical protein yueF] [GN:yueF] [CL:Bacillus subtilis conserved hypothetical protein yueF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184257:g2635675] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yueF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:64687] [RE:65796] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_25429512_c3_593 2003 5775 1392 463 1130 1.3e−114 Description pir:[LN:H69862] [AC:H69862] [PN:Na+-transporting ATP synthase homolog ykrM] [GN:ykrM] [CL:Na+-ATP synthase chain J] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184940:g2633721] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykrM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to Na+-transporting ATP synthase] [LE:20743] [RE:22092] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_25430316_c2_522 2004 5776 171 56 171 5.6e−13 Description pir:[LN:QQSA8T] [AC:A04493] [PN:hypothetical protein B-189] [OR:Staphylococcus aureus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26178400_c3_542 2005 5777 186 61 71 0.042 Description sp:[LN:AOPP_HUMAN] [AC:P30044] [OR:HOMO SAPIENS] [SR:,HUMAN] [DE:71B)] [SP:P30044] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26212787_f3_335 2006 5778 612 203 308 1.7e−27 Description pir:[LN:C69844] [AC:C69844] [PN:hypothetical protein yjbK] [GN:yjbK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183178:g2633512] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:40993] [RE:41565] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26377340_c2_488 2007 5779 999 332 208 4.6e−15 Description gp:[GI:e257629:g1771202] [LN:LLLVSFPEP] [AC:X99710] [PN:transcription factor] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:L. lactis ORF, genes homologous to vsf-1 and pepF2 and gene encoding protein homologous to methyltransferase.] [NT:weak homology with vsf-1 gene (X73635)] [LE:934] [RE:1917] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26564012_c2_477 2008 5780 2616 871 2649 1.5e−275 Description gp:[GI:g3150046] [LN:AF016634] [AC:AF016634] [PN:ClpB chaperone homolog] [GN:clpB] [OR:Lactococcus lactis subsp. cremoris] [DB:genpept-bct2] [DE:Lactococcus lactis cremoris ClpB chaperone homolog (clpB) and phosphoribosylformylglycinamide cyclo-ligase (pur5) genes, complete cds; and phosphoribosylglycinamide formyltransferase (pur3) gene, partial cds.] [LE:183] [RE:2786] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26567557_c3_558 2009 5781 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26604662_c2_495 2010 5782 630 209 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_26775637_c1_447 2011 5783 1389 462 599 2.5e−58 Description sp:[LN:MENF_BACSU] [AC:P23973:P23972] [GN:MENF:ICSM] [OR:BACILLUS SUBTILIS] [EC:5.4.99.6] [DE:MENAQUINONE-SPECIFIC ISOCHORISMATE SYNTHASE,] [SP:P23973:P23972] [DB:swissprot] >pir:[LN:A69657] [AC:A69657:S27507:S27508:I39883] [PN:probable isochorismate synthase, menaquinone-specific menF] [GN:menF] [CL:isochorismate synthase] [OR:Bacillus subtilis] [EC:5.4.99.6] [DB:pir2] >gp:[GI:e1185956:g2635567] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:menaquinone-specific isochorismate synthase] [GN:menF] [FN:menaquinone biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:5.4.99.6] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:alternate gene name:icsM, entC] [SP:P23973] [LE:153612] [RE:155027] [DI:complement] >gp:[GI:g2293145] [LN:AF008220] [AC:AF008220] [PN:isochorismate synthase] [GN:menF] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:25400] [RE:26815] [DI:direct] >gp:[GI:g1185288] [LN:BACMENAQOP] [AC:M74538:M74182:M74183] [PN:isochorismate synthase] [GN:menF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain RB1) DNA] [DB:genpept-bct2] [DE:Bacillus subtilis menaquinone operon:menF, menD, menB and menE genes, complete cds.] [NT:based on similarity to E. coli EntC, A. hydrophila] [LE:143] [RE:1558] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_2848308_c3_607 2012 5784 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_289802_f2_227 2013 5785 189 62 89 0.0019 Description pir:[LN:F22845] [AC:F22845] [PN:hypothetical protein 6] [OR:mitochondrion Trypanosoma brucei] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_2922260_c3_574 2014 5786 384 127 174 2.7e−13 Description pir:[LN:D69844] [AC:D69844] [PN:hypothetical protein yjbL] [GN:yjbL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183179:g2633513] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:41690] [RE:42058] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_29335888_c3_562 2015 5787 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_29570302_f1_24 2016 5788 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_31281253_c3_538 2017 5789 1221 406 1513 3.5e−155 Description sp:[LN:OAT_BACSU] [AC:P38021] [GN:ROCD] [OR:BACILLUS SUBTILIS] [EC:2.6.1.13] [DE:AMINOTRANSFERASE)] [SP:P38021] [DB:swissprot] >pir:[LN:S55793] [AC:S55793:S49267:B53370:H69693] [PN:ornithine--oxo-acid transaminase, rocD:ornithine aminotransferase:ornithine--oxo-acid aminotransferase] [GN:rocD] [CL:ornithine--oxo-acid aminotransferase] [OR:Bacillus subtilis] [EC:2.6.1.13] [DB:pir2] >gp:[GI:d1011955:g1064807] [LN:BACGNTZA] [AC:D78193] [PN:orthinine aminotransferase] [GN:rocD] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 36 kb sequence between gntZ and trnY genes encoding 34 ORFs.] [LE:25845] [RE:27050] [DI:complement] >gp:[GI:g550311] [LN:BSROCDEF] [AC:X81802] [PN:ornithine< aminotransferase] [GN:rocD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis rocD, rocE and rocF genes.] [SP:P38021] [LE:241] [RE:1446] [DI:direct] >gp:[GI:e1184760:g2636581] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:ornithine aminotransferase] [GN:rocD] [FN:arginine and ornithine utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.6.1.13] [DE:Bacillus subtilis complete genome (section 21 of 21):from 3999281 to 4214814.] [SP:P38021] [LE:144229] [RE:145434] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_31300807_c1_436 2018 5790 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_31525260_c3_579 2019 5791 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_32062875_c1_439 2020 5792 291 96 333 3.8e−30 Description gp:[GI:g1731452] [LN:SAU38429] [AC:U38429] [PN:recombination protein] [GN:pre] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus chloramphenicol resistance plasmid pKH7, complete sequence.] [LE:2074] [RE:3285] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_32067937_f2_247 2021 5793 1365 454 1790 1.5e−184 Description gp:[GI:g2792490] [LN:AF041467] [AC:AF041467] [PN:coenzyme A disulfide reductase] [FN:pyridine nucleotide disulfide oxidoreductase] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus coenzyme A disulfide reductase gene, complete cds.] [NT:CoADR; flavoenzyme (FAD); single catalytic cysteine] [LE:66] [RE:1382] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_32132183_c1_455 2022 5794 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_32457312_c2_501 2023 5795 495 164 233 1.5e−19 Description gp:[GI:e303881:g1850807] [LN:CPCPEAA] [AC:X71844] [PN:putative transposase] [OR:Clostridium perfringens] [DB:genpept-bct1] [DE:C. perfringens uapC, cpe, and nadC genes.] [LE:2477] [RE:2932] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_32635937_c1_429 2024 5796 1503 500 2239 4.1e−232 Description gp:[GI:e1301684:g3256223] [LN:SAY14370] [AC:Y14370] [PN:UDP-N-acetylmuramyl-tripeptide synthetase] [GN:murE] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus RF3, murE, ypfP genes.] [LE:3244] [RE:4722] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_33364067_c1_431 2025 5797 1782 593 542 2.7e−52 Description gp:[GI:g2109443] [LN:SPDNAARG] [AC:AF000658] [PN:putative serine protease] [GN:sphtra] [OR:Streptococcus pneumoniae] [DB genpept-bct2] [DE:Streptococcus pneumoniae R801 tRNA-Arg gene, partial sequence, and putative serine protease (sphtra), SPSpoJ (spspoJ), initiator protein (spdnaa) and beta subunit of DNA polymerase III (spdnan) genes, complete cds.] [NT:SPHtra] [LE:765] [RE:1958] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_3371067_c2_482 2026 5798 954 317 1033 2.5e−104 Description pir:[LN:E38447] [AC:E38447:S15234:C69669] [PN:oligopeptide transport ATP-binding protein oppF:sporulation initiation protein spo0KE] [GN:spo0KE:oppF] [CL:inner membrane protein malK:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143608] [LN:BACSPO0K] [AC:M57689] [PN:sporulation protein] [GN:spo0KE] [OR:Bacillus subtilis] [SR:B. subtilis (strain JH642) DNA, clones pDR20/21, pJL2/3 and pJL7] [DB:genpept-bct1] [DE:Bacillus subtilis spo0K operon.] [LE:5152] [RE:6078] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_33710968_f2_124 2027 5799 453 150 742 1.7e−73 Description gp:[GI:g2267241] [LN:SEU71377] [AC:U71377] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds.] [NT:ORF3] [LE:1957] [RE:2379] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_3394540_f2_138 2028 5800 312 103 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34006561_f3_312 2029 5801 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34062930_c1_440 2030 5802 273 90 290 1.4e−25 Description sp:[LN:PRE3_STAAU] [AC:P03864] [OR:STAPHYLOCOCCUS AUREUS] [DE:PLASMID RECOMBINATION ENZYME (MOBILIZATION PROTEIN)] [SP:P03864] [DB:swissprot] >gp:[GI:g151683] [LN:PT1CG] [AC:J01764:J01765] [OR:Plasmid pT181] [SR:Plasmid pT181 DNA from Staphylococcus aureus] [DB:genpept-bct1] [DE:Plasmid pT181, complete genome.] [NT:Pre protein (plasmid recombination)] [LE:2521] [RE:3762] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34073552_c2_509 2031 5803 1545 514 2291 1.3e−237 Description gp:[GI:e1301683:g3256222] [LN:SAY14370] [AC:Y14370] [PN:peptide chain release factor 3] [GN:RF3] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus RF3, murE, ypfP genes.] [LE:1435] [RE:3000] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34163562_f3_322 2032 5804 486 161 329 1.0e−29 Description pir:[LN:D69583] [AC:D69583] [PN:alcohol dehydrogenase, adhB] [GN:adhB] [CL:alcohol dehydrogenase long-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [EC:1.1.1.1] [DB:pir2] >gp:[GI:e209890:g2108273] [LN:BS233DEG] [AC:X92868:X79978] [PN:NAD alcohol dehydrogenase] [GN:adhB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 23.9 kb fragment from map position 233 degrees on the chromosome.] [LE:13725] [RE:14861] [DI:complement] >gp:[GI:e1183926:g2635142] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:alcohol dehydrogenase] [GN:adhB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21):from 2599451 to 2812870.] [LE:153270] [RE:154406] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34179031_f2_122 2033 5805 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34398505_f3_354 2034 5806 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_34407888_c3_572 2035 5807 729 242 288 1.9e−37 Description gp:[GI:g2952027] [LN:BFU88888] [AC:U88888] [PN:MecA homolog] [GN:mecA] [OR:Bacillus firmus] [DB:genpept-bct2] [DE:Bacillus firmus MecA homolog (mecA) and cardiolipin synthase (cls) genes, complete cds.] [LE:349] [RE:1002] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_35158177_c1_408 2036 5808 1407 468 903 1.5e−90 Description gp:[GI:d1039121:g4514345] [LN:AB013374] [AC:AB013374] [PN:Ykok] [GN:ykok] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 mamX, yjdA, ykoK and yvfK genes, partial and complete cds.] [LE:1793] [RE:3142] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_35937827_c2_505 2037 5809 510 169 343 3.3e−31 Description pir:[LN:G69846] [AC:G69846] [PN:hypothetical protein yjcG] [GN:yjcG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183205:g2633539] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjcG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:61943] [RE:62458] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_36128387_c3_621 2038 5810 165 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_36134717_c1_401 2039 5811 1647 548 889 4.6e−89 Description pir:[LN:A53310] [AC:A53310] [PN:pheromone cAD1 binding protein precursor:TraC] [GN:traC] [CL:dipeptide transport protein] [OR:Enterococcus faecalis] [DB:pir2] >gp:[GI:g388269] [LN:AD1TRAC] [AC:L19532] [GN:traC] [OR:Plasmid pAD1] [SR:Plasmid pAD1 DNA] [DB:genpept-bct1] [DE:Plasmid pAD1 (from Enterococcus faecalis strain:DS16) hemolysinbacteriocin (traC) gene, complete cds, traA and traB genes, 3′ end.] [LE:166] [RE:1797] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_36229625_f3_295 2040 5812 204 67 195 1.6e−15 Description pir:[LN:B69869] [AC:B69869] [PN:hypothetical protein ykvS] [GN:ykvS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184971:g2633752] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:52338] [RE:52769] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_36611062_c3_557 2041 5813 420 139 174 2.7e−13 Description pir:[LN:D69837] [AC:D69837] [PN:hypothetical protein yisL] [GN:yisL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183078:g2633412] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yisL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [LE:153237] [RE:153593] [DI:direct] >gp:GI:e1173510:g2145377] [LN:BSY09476] [AC:Y09476] [PN:YisL] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54 kb genomic DNA fragment.] [NT:putative] [LE:10463] [RE:10819] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_37777_c1_434 2042 5814 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_3954718_c1_394 2043 5815 3489 1162 1331 6.7e−136 Description sp:[LN:ADDB_BACSU] [AC:P23477] [GN:ADDB] [OR:BACILLUS SUBTILIS] [DE:ATP-DEPENDENT NUCLEASE SUBUNIT B] [SP:P23477] [DB:swissprot] >pir:[LN:A39432] [AC:A39432:S61272:A69583] [PN:ATP-dependent deoxyribonuclease chain B addB:ATP-dependent exonuclease synthesis protein AdaB] [GN:addB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142439] [LN:BACADDAA] [AC:M63489] [PN:ATP-dependent nuclease] [GN:addA] [OR:Bacillus subtilis] [SR:B. subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis ATP-dependent nuclease (addA) and (addB), and open reading frame 3, partial cds.] [LE:502] [RE:4002] [DI:direct] >gp:[GI:e1183064:g2633398] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:ATP-dependent deoxyribonuclease (subunit B)] [GN:addB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [SP:P23477] [LE:136293] [RE:139793] [DI:direct] >gp:[GI:e1364880:g2226191] [LN:BSY14081] [AC:Y14081] [PN:ATP-dependent nuclease] [GN:addB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 92 degrees:region between comK and addAB.] [NT:TTG start; see ref [3]; In EMBL entry M63489 this] [LE:18588] [RE:22088] [DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4019193_c1_418 2044 5816 783 260 749 3.2e-74 Description pir: [LN:G69845] [AC:G69845] [PN:enoyl-[acyl-carrier-protein] reductase (NADH), yjbW] [GN:yjbW] [CL:enoyl-[acyl-carrier-protein] reductase (NADH): short-chain alcohol dehydrogenase homology] [OR:Bacillus subtilis] [EC:1.3.1.9] [DB:pir2] >gp:[GI:e1183192:g2633526] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to enoyl-acyl-carrier protein reductase] [LE:52836] [RE:53645] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4070151_c2_472 2045 5817 447 148 165 2.4e-12 Description gp:[GI:e1173495:g2145362] [LN:BSY09476] [AC:Y09476] [PN:AddA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54kb genomic DNA fragment.] [SP:P23478] [LE:<1] [RE:702] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4080443_c1_409 2046 5818 1854 617 1574 1.2e-161 Description pir:[LN:A69845] [AC:A69845] [PN:Na+/H+ antiporter homolog yjbQ] [GN:yjbQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183184:g2633518] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to Na+/H+ antiporter] [LE:45437] [RE:47281] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4088962_c2_508 2047 5819 279 92 76 0.0065 Description pir:[LN:A70008] [AC:A70008] [PN:hypothetical protein yueH] [GN:yueH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184255:g2635673] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yueH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:64085] [RE:64333] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4094433_f1_72 2048 5820 999 332 1184 2.5e-120 Description sp:[LN:SYW_BACSU] [AC:P21656] [GN:TRPS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.2] [DE:(TRPRS)] [SP:P21656] [DB:swissprot] >pir:[LN:YWBS] [AC:JT0481:A32452:E69726] [PN:tryptophan--tRNA ligase, :tryptophanyl-tRNA synthetase] [GN:trpS] [CL:tryptophan--tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.2] [DB:pir1] >gp:[GI:g143786] [LN:BACTRPSA] [AC:M24068] [OR:Bacillus subtilisi] [SR:B. subtilis (strain QB928) DNA, clone pTSQ2] [DB:genpept-bct1] [DE:B. subtilis trpS gene encoding tryptophanyl-tRNA synthetase, complete cds.] [NT:tryptophanyl-tRNA synthetase (EC 6.1.1.2)] [LE:171] [RE:1163] [DI:direct] >gp:[GI:e1183162:g2633496] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:tryptophanyl-tRNA synthetase] [GN:trpS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.2] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [SP:P21656] [LE:23195] [RE:24187] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_40957_c1_407 2049 5821 858 285 513 3.2e-49 Description sp:[LN:YJBO_BACSU] [AC:O31613] [GN:YJBO] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 31.5 KD PROTEIN IN MECA-TENA INTERGENIC REGION] [SP:O31613] [DB:swissprot] >pir:[LN:G69844] [AC:G69844] [PN:conserved hypothetical protein yjbO] [GN:yjbO] [CL:conserved hypothetical protein H10176] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183182:g2633516] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to hypothetical proteins] [SP:O31613] [LE:43604] [RE:44455] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4100393_f3_379 2050 5822 1215 404 1458 2.3e-149 Description pir:[LN:B69589] [AC:B69589] [PN:argininosuccinate synthase argG] [GN:argG] [CL:argininosuccinate synthase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184194:g2635410] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:argininosuccinate synthase] [GN:argG] [FN:arginine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.4.5] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:217075] [RE:218286] [DI:complement] >gp:[GI:e1185818:g2635429] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:argininosuccinate synthase] [GN:argG] [FN:arginine biosynthesis] [OR:Bacillus subtilis] (DB:genpept-bct1] [EC:6.3.4.5] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:14435] [RE:15646] [DI:complement] >gp:[GI:g2293242] [LN:AF008220] [AC:AF008220] [PN:arginine succinate synthase] [GN:argG] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:164781] [RE:165992] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4173410_c2_504 2051 5823 792 263 485 3.0e-46 Description pir:[LN:H69846] [AC:H69846] [PN:hypothetical protein yjcH] [GN:yjcH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183206:g2633540] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjcH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:62495] [RE:63217] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4181312_c2_527 2052 5824 606 201 93 0.010 Description pir:[LN:A71455] [AC:A71455] [PN:probable acetyltransferase] [GN:PH0296] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030311:g3256685] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:172aa long hypothetical acetyltransferase] [GN:PH0296] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [NT:similar to PIR:A64491 percent identity:42.029 in] [LE:262066] [RE:262584] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4335752_f1_4 2053 5825 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4546890_f2_174 2054 5826 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4687518_c2_519 2055 5827 585 194 179 8.0e-14 Description sp:[LN:COMK_BACSU] [AC:P40396] [GN:COMK] [OR:BACILLUS SUBTILIS] [DE:COMPETENCE TRANSCRIPTION FACTOR (CTF) (COMPETENCE PROTEIN K)] [SP:P40396] [DB:swissprot] >pir:[LN:S43611] [AC:S43611:A69604] [PN:competence transcription factor (CTF) comK] [GN:comK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183044:g2633378] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:competence transcription factor (CTF)] [GN:comK] [FN:final autoregulatory control switch prior to] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [SP:P40396] [LE:117081] [RE:117659] [DI:direct] >gp:[GI:g546917] [LN:S70734] [AC:S70734] [GN:comK] [OR:Bacillus subtilis] [SR:Bacillus subtilis E26] [DB:genpept-bct1] [DE:comK [Bacillus subtilis, E26, Genomic, 3 genes, 1947 nt] .] [NT:This sequence comes from FIG. 3.] [LE:900] [RE:1478] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4688750_f3_283 2056 5828 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4726010_c1_413 2057 5829 2304 767 1777 3.7e-183 Description gp:[GI:g1196907] [LN:STMDRRC] [AC:L76359] [PN:daunorubicin resistance protein] [GN:drrC] [OR:Streptomyces peucetius] [DB:genpept-bct1] [DE:Streptomyces peucetius daunorubicin resistance protein (drrC) gene, complete cds.] [LE:991] [RE:3285] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4781275_f2_194 2058 5830 249 82 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4812675_c1_412 2059 5831 321 106 273 3.1e-23 Description Sp:[LN:G6PD_BACSU] [AC:P54547] [GN:ZWF] [OR:BACILLUS SUBTILIS] [EC:1.1.1.49] [DE:PROTEIN 11] (VEG11)] [SP:P54547] [DB:swissprot] >pir:[LN:B69964] [AC:B69964] [PN:probable glucose-6-phosphate 1-dehydrogenase, yqjJ] [GN:yqjJ] [CL:glucose-6-phosphate dehydrogenase] [OR:Bacillus subtilis] [EC:1.1.1.49] [DB:pir2] >gp:[GI:d1013296:g1303961] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqjJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:239025] [RE:240494] [DI:complement] >gp:[GI:e1185654:g2634820] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to glucose-6-phosphate 1-dehydrogenase) [SP:P54547] [LE:83125] [RE:84594] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_48587_f3_381 2060 5832 1062 353 729 4.2e-72 Description sp:[LN:GLPQ_BACSU] [AC:P37965] [GN:GLPQ] [OR:BACILLUS SUBTILIS] [EC:3.1.4.46] [DE:(GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE)] [SP:P37965] [DB:swissprot] >pir:[LN:I40418] [AC:I40418:E69634:S37251] [PN:glycerophosphoryl diester phosphodiesterase glpQ] [GN:glpQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1034076:g3599635] [LN:AB006424] [AC:AB006424] [GN:ybeD] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23 degree.] [LE:36004] [RE:36885] [DI:complement] >gp:[GI:g403373] [LN:BSGLPTQ] [AC:Z26522] [PN:glycerophosphoryl diester phosphodiesterase] [GN:glpQ] [FN:hydrolysis of deacylated phospholipids] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis glpT and glpQ genes for glycerol 3-phosphate permeaseand glycerophosphoryl diester phosphodiesterase.] [SP:P37965] [LE:1748] [RE:2629] [DI:direct] >gp:[GI:e1182165:g2632499] [LN:BSUB0002] [AC:Z99105:AL009126] [PN:glycerophosphoryl diester phosphodiesterase] [GN:glpQ] [FN:hydrolysis of deacylated phospholipids] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.4.46] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to 415810.] [NT:alternate gene name:ybeD] [SP:P37965] [LE:38353] [RE:39234] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4882133_c1_435 2061 5833 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4882806_c2_524 2062 5834 522 173 399 3.9e-37 Description pir:[LN:D69838] [AC:D69838] [PN:conserved hypothetical protein yisU] [GN:yisU] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183088:g2633422] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yisU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:165981] [RE:166643] [DI:complement] >gp:[GI:e1173520:g2145387] [LN:BSY09476] [AC:Y09476] [PN:YisU] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54kb genomic DNA fragment.] [NT:putative] [LE:23207] [RE:23869] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_4961000_f1_6 2063 5835 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_5085003_f1_118 2064 5836 1455 484 1439 2.4e-147 Description pir:[LN:C69589] [AC:C69589] [PN:argininosuccinate lyase argH] [GN:argH] [CL:argininosuccinate lyase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184193:g2635409] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:argininosuccinate lyase] [GN:argH] [FN:arginine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.3.2.1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:215693] [RE:217078] [DI:complement] >gp:[GI:e1185817:g2635428] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:argininosuccinate lyase] [GN:argH] [FN:arginine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.3.2.1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:13053] [RE:14438] [DI:complement] >gp:[GI:g2293243] [LN:AF008220] [AC:AF008220] [PN:arginine succinate lyase] [GN:argH] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:165989] [RE:167374] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_5115927_c2_528 2065 5837 1680 559 340 1.3e-59 Description pir:[LN:S76520] [AC:S76520] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1011017:g1001635] [LN:SYCSLRD] [AC:D64002:AB001339] [PN:2-succinyl-6-hydroxy-2,] [GN:menD] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 21/27, 2644795-2755702.] [NT:ORF_ID:s110603] [LE:25321] [RE:27108] DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_5165711_f3_336 2066 5838 447 148 338 1.1e-30 Description pir:[LN:A69844] [AC:A69844] [PN:hypothetical protein yjbI] [GN:yjbI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183176:g2633510] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:39591] [RE:39989] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_5250258_c1_403 2067 5839 1839 612 1741 2.4e-179 Description gp:[GI:d1014255:g1651216] [LN:D88209] [AC:D88209] [PN:Pz-peptidase] [OR:Bacillus licheniformis] [SR:Bacillus licheniformis (strain:N22) DNA] [DB:genpept-bct1] [DE:Bacillus licheniformis DNA for Pz-peptidase, complete cds.] [LE:238] [RE:2124] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_579441_c1_386 2068 5840 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_580307_f2_246 2069 5841 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_6057943_c2_517 2070 5842 999 332 990 9.2e-100 Description pir:[LN:G69830] [AC:G69830] [PN:lipoate-protein ligase homolog yhfJ] [GN:yhfJ] [CL:lipoate-protein ligase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183027:g2633361] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhfJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to lipoate-protein ligase] [LE:99131] [RE:100126] [DI:direct] >gp:[GI:e325016:g2226243] [LN:BSY14083] [AC:Y14083] [PN:hypothetical protein] [GN:yhfJ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 76–78 degrees: between glyB-aprE.] [NT:Similarity to several lipoate-protein ligases] [LE:18990] [RE:19985] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_6688757_f2_123 2071 5843 507 168 823 4.6e-82 Description gp:[GI:g2267240] [LN:SEU71377] [AC:U71377] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds.] [NT:ORF2] [LE:913] [RE:1383] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_6921877_c1_410 2072 5844 219 72 192 2.3e-14 Description sp:[LN:G6PD_BACSU] [AC:P54547] [GN:ZWF] [OR:BACILLUS SUBTILIS] [EC:1.1.1.49] [DE:PROTEIN 11) (VEG11)] [SP:P54547] [DB:swissprot] >pir:[LN:B69964] [AC:B69964] [PN:probable glucose-6-phosphate 1-dehydrogenase, yqjJ] [GN:yqjJ] [CL:glucose-6-phosphate dehydrogenase] [OR:Bacillus subtilis] [EC:1.1.1.49] [DB:pir2] >gp:[GI:d1013296:g1303961] [LN:BACJH642] [AC:D84432:D82370] [PN:YqjJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:239025] [RE:240494] [DI:complement] >gp:[GI:e1185654:g2634820] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to glucose-6-phosphate 1-dehydrogenase] [SP:P54547] [LE:83125] [RE:84594] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_7032752_f3_268 2073 5845 795 264 1335 2.5e-136 Description gp:[GI:g2267239] [LN:SEU71377] [AC:U71377] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis autolysin AtlE and putative transcriptional regulator AtlR genes, complete cds.] [NT:ORF1] [LE:<1] [RE:865] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_7081712_f1_27 2074 5846 234 77 84 0.00093 Description pir:[LN:H69835] [AC:H69835] [PN:hypothetical protein yhzC] [GN:yhzC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183043:g2633377] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhzC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [LE:116555] [RE:116788] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_7145260_f3_337 2075 5847 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_7228438_c2_471 2076 5848 3231 1076 1793 7.4e-185 Description sp:[LN:ADDA_BACSU] [AC:P23478] [GN:ADDA] [OR:BACILLUS SUBTILIS] [DE:ATP-DEPENDENT NUCLEASE SUBUNIT A] [SP:P23478] [DB:swissprot] >pir:[LN:B39432] [AC:B39432:H69582] [PN:ATP-dependent deoxyribonuclease chain A addA:ATP-dependent exonuclease synthesis protein AddA] [GN:addA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142440] [LN:BACADDAA] [AC:M63489] [PN:ATP-dependent nuclease] [GN:addB] [OR:Bacillus subtilis] [SR:B. subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis ATP-dependent nuclease (addA) and (addB), and open reading frame 3, partial cds.] [LE:3988] [RE:7687] [DI:direct] >gp:[GI:e1183065:g2633399] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:ATP-dependent deoxyribonuclease (subunit A)] [GN:addA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name:recE5] [SP:P23478] [LE:139780] [RE:143478] [DI:direct] >gp:[GI:e1364881:g2226192] [LN:BSY14081] [AC:Y14081] [PN:ATP-dependent nuclease] [GN:addA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 92 degrees: region between comK and addAB.] [NT:see ref [3]; In EMBL entry M63489 this gene is] [LE:22075] [RE:25773] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_7241300_c2_502 2077 5849 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_7308375_c3_567 2078 5850 942 313 791 1.1e-78 Description pir:[LN:H69668] [AC:H69668:S15231:B38447] [PN:oligopeptide transport system permease protein oppB:sporulation initiation protein spo0KB] [GN:oppB:spo0KB] [CL:oligopeptide permease protein oppB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183164:g2633498] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:oligopeptide ABC transporter (permease)] [GN:oppB] [FN:required for initiation of sporulation,] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:alternate gene name:spo0KB] [LE:26676] [RE:27611] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_782816_c1_396 2079 5851 1857 618 776 3.7e-116 Description pir:[LN:C69975] [AC:C69975] [PN:acyltransferase homolog yrhL] [GN:yrhL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1934616] [LN:BSU93874] [AC:U93874] [PN:hypothetical protein YrhL] [GN:yrhL] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis cysteine synthase (yrhA), cystathioninegamma-lyase (yrhB), YrhC (yrhC), YrhD (yrhD), formate dehydrogenase chain A (yrhE), YrhF (yrhF), formate dehydrogenase (yrhG), YrhH (yrhH), regulatory protein (yrhI), cytochrome P450 102 (yrhJ), YrhK (yrhK), hypothetical protein YrhL (yrhL), putative anti-SigV factor (yrhM), RNA polymerase sigma factor SigV (sigV) and YrhO (yrhO) genes, complete cds, and YrhP (yrhP) gene, partial cds.] [NT:similar to Haemophilus influenzae hypothetical] [LE:13904] [RE:15808] [DI:complement] >gp:[GI:e1183944:g2635160] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrhL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to acyltransferase] [LE:171138] [RE:173042] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_813412_c1_411 2080 5852 156 51 191 3.0e-14 Description sp:[LN:G6PD_BACSU] [AC:P54547] [GN:ZWF] [OR:BACILLUS SUBTILIS] [EC:1.1.1.49] [DE:PROTEIN 11) (VEG11)] [SP:P54547] [DB:swissprot] >pir:[LN:B69964] [AC:B69964] [PN:probable glucose-6-phosphate 1-dehydrogenase, yqjJ] [GN:yqjJ] [CL:glucose-6-phosphate dehydrogenase] [OR:Bacillus subtilis] [EC:1.1.1.49] [DB:pir2] >gp:[GI:d1013296:g1303961] [LN:BACJHG42] [AC:D84432:D82370] [PN:YqjJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642 (trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:239025] [RE:240494] [DI:complement] >gp:[GI:e1185654:g2634820] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqjJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to glucose-6-phosphate 1-dehydrogenase] [SP:P54547] [LE:83125] [RE:84594] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_859838_f3_357 2081 5853 384 127 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_978436_f2_126 2082 5854 1188 395 867 9.9e-87 Description sp:[LN:PATA_BACSU] [AC:P16524] [GN:PATA:UAT] [OR:BACILLUS SUBTILIS] [EC:2.6.1.—] [DE:PUTATIVE AMINOTRANSFERASE A,] [SP:P16524] [DB:swissprot] >gp:[GI:e1181905:g2632221] [LN:BS16829KB] [AC:AJ222587] [PN:PatA protein] [GN:patA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 29kB DNA fragment from ykwC gene to cse15 gene.] [NT:hisC homologue] [SP:P16524] [LE:6213] [RE:7391] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_985887_c3_570 2083 5855 435 144 570 2.9e-55 Description pir:[LN:D69843] [AC:D69843] [PN:conserved hypothetical protein yjbD] [GN:yjbD] [CL:hypothetical protein yjbD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183170:g2633504] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjbD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to hypothetical proteins] [LE:32779] [RE:33174] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000991_9927077_f3_378 2084 5856 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_10008513_c3_117 2085 5857 2667 888 3361 0.0 Description pir:[LN:SYBSVS] [AC:A26738] [PN:valine--tRNA ligase, :valyl-tRNA synthetase] [GN:valS] [CL:valine--tRNA ligase] [OR:Bacillus stearothermophilus] [EC:6.1.1.9] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_10720877_c1_78 2086 5858 1329 442 1343 3.6e-137 Description pir:[LN:F69723] [AC:F69723] [PN:trigger factor (prolyl isomerase) tig] [GN:tig] [CL:trigger factor] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184072:g2635288] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:trigger factor (prolyl isomerase)] [GN:tig] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:alternate gene name:yzzH] [SP:P80698] [LE:90286] [RE:91560] [DI:complement] >gp:[GI:e1165373:g1770074] [LN:BSZ75208] [AC:Z75208] [PN:trigger factor] [GN:tig] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:homology to trigger factor of Haemophilus] [SP:P80698] [LE:78347] [RE:79621] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_11954500_f3_71 2087 5859 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_1211562_c2_94 2088 5860 1269 422 1518 1.0e-155 Description gp:[GI:e221213:g1296452] [LN:BSCLPXGEN] [AC:X95306] [PN:ClpX protein] [GN:clpX] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis clpX gene.] [NT:ATP-dependent protease] [SP:P50866] [LE:168] [RE:1430] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_14725300_c3_108 2089 5861 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_15820252_c1_81 2090 5862 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_16835900_c2_104 2091 5863 147 48 74 0.011 Description gp:[GI:g1123053] [LN:CELF59A6] [AC:U41994] [GN:F59A6.2] [OR:Caenorhabditis elegans] [SR:Caenorhabditis elegans strain=Bristol N2] [DB:genpept-invl] [DE:Caenorhabditis elegans cosmid F59A6.] [LE:19719:20072] [RE:19904:20242] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_188388_c3_122 2092 5864 579 192 220 3.6e-18 Description sp:[LN:MREC_BACSU] [AC:Q01466] [GN:MREC] [OR:BACILLUS SUBTILIS] [DE:ROD SHAPE-DETERMINING PROTEIN MREC] [SP:Q01466] [DB:swissprot] >pir:[LN:JC4595] [AC:JC4595] [PN:cell shape determinant MreC:protease secretion stimulating protein, MreC] [GN:mreC] [OR:Bacillus stearothermophilus] [DB:pir2] >pir:[LN:C45240] [AC:C45240:D45239:S27518] [PN:cell shape determinant mreC] [GN:mreC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143213] [LN:BACMREMIN] [AC:M95582] [GN:mreC] [FN:cell shape determining] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis (mreB) gene complete cds, (mreC) gene complete cds, (mreD) gene complete cds, (minC) gene complete cds, (minD) gene complete cds.] [NT:putative] [LE:1370] [RE:2242] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_19707767_f1_4 2093 5865 324 107 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_20348160_f1_1 2094 5866 222 73 71 0.022 Description gp:[GI:g1131474] [LN:PBU42580] [AC:U42580:U17055:U32570] [GN:A130R] [OR:Paramecium bursaria Chlorella virus 1] [DB:genpept-vrl] [DE:Paramecium bursaria Chlorella virus 1, complete genome.] [LE:69061] [RE:69378] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_21500253_c3_109 2095 5867 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_21563137_c2_102 2096 5868 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_23444187_f3_62 2097 5869 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_23522567_c2_91 2098 5870 381 126 450 1.5e-42 Description sp:[LN:RL20_BACSU] [AC:P55873] [GN:RPLT] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L20] [SP:P55873] [DB:swissprot] >pir:[LN:F69696] [AC:F69696] [PN:ribosomal protein L20 rplT] [GN:rplT] [CL:Escherichia coli ribosomal protein L20] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184134:g2635350] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:ribosomal protein L20] [GN:rplT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P55873] [LE:156202] [RE:156561] [DI:complement] >gp:[GI:e1165301:g1770009] [LN:BSZ75208] [AC:Z75208] [PN:ribosomal protein L20] [GN:rplT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:homology to rplT of Bacillus stearothermphilus;] [SP:P55873] [LE:13346] [RE:13705] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_23531628_f2_28 2099 5871 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_23697141_c2_97 2100 5872 930 309 1327 1.8e-135 Description gp:[GI:g2589181] [LN:SAU89396] [AC:U89396] [PN:porphobilinogen deaminase] [GN:hemC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [EC:4.3.1.8] [DE:Staphylococcus aureus hemCDBL gene cluster:porphobilinogendeaminase (hemC), uroporphyrinogen III synthase (hemD), d-aminolevulinic acid dehydratase (hemB) and GSA-1-aminotransferase (hemL) genes, complete cds.] [LE:219] [RE:1145] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_24017052_c2_103 2101 5873 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_24240877_c3_119 2102 5874 522 173 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_24625161_c1_87 2103 5875 141 46 160 8.2e-12 Description sp:[LN:RADC_STAAU] [AC:P31337] [GN:RADC] [OR:STAPHYLOCOCCUS AUREUS] [DE:DNA REPAIR PROTEIN RADC HOMOLOG (25 KD PROTEIN) (FRAGMENT)] [SP:P31337] [DB:swissprot] >gp:[GI:g551992] [LN:STATNIS5] [AC:K02985] [OR:Staphylococcus aureus] [SR:S. aureus (strain RN450) DNA] [DB:genpept-bct1] [DE:S. aureus (strain RN450) transposon Tn554 insertion site.] [NT:25 kD protein (putative); putative] [LE:<1] [RE:>249] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_24897312_c3_112 2104 5876 186 61 255 7.1e-22 Description sp:[LN:HEM2_STAAU] [AC:P50915] [GN:HEMB] [OR:STAPHYLOCOCCUS AUREUS] [EC:4.2.1.24] [DE:SYNTHASE) (ALAD) (ALADH)] [SP:P50915] [DB:swissprot] >gp:[GI:g2589183] [LN:SAU89396] [AC:U89396] [PN:d-aminolevulinic acid dehydratase] [GN:hemB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [EC:4.2.1.24] [DE:Staphylococcus aureus hemCDBL gene cluster: porphobilinogendeaminase (hemC), uroporphyrinogen III synthase (hemD), d-aminolevulinic acid dehydratase (hemB) and GSA-1-aminotransferase (hemL) genes, complete cds.] [LE:1838] [RE:2809] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_25582912_f2_23 2105 5877 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_25596000_c3_111 2106 5878 825 274 460 1.3e-43 Description sp:[LN:HEMX_BACSU] [AC:P16645] [GN:HEMX] [OR:BACILLUS SUBTILIS] [DE:HEMX PROTEIN] [SP:P16645] [DB:swissprot] >pir:[LN:B35252] [AC:B35252:C69640] [PN:hemA concentration negative effector hemx] [GN:hemx] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143036] [LN:BACHEMAXC] [AC:M57676:M32130] [GN:hemx] [OR:Bacillus subtilis] [SR:B. subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis hemAXCDBL gene cluster.] [NT:unidentified gene product] [LE:1607] [RE:2437] [DI:direct] >gp:[GI:e1184065:g2635281] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:membrane-bound protein] [GN:hemX] [FN:negative effector of the concentration of HemA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P16645] [LE:80898] [RE:81728] [DI:complement] >gp:[GI:e1165382:g1770082] [LN:BSZ75208] [AC:Z75208] [PN:membrane-bound protein] [GN:hemx] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:membrane bound protein dispensable for heme] [SP:P16645] [LE:88179] RE:89009] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_2866255_f3_65 2107 5879 264 87 74 0.045 Description gp:[GI:e1250026:g2842472] [LN:SPBC20F10] [AC:AL021747] [PN:preg-like protein.] [GN:SPBC20F10.10] [OR:Schizosaccharomyces pombe] [SR:fission yeast] [DB:genpept-pln1] [DE:S. pombe chromosome II cosmid c20F10.] [NT:SPBC20F10.10, len:243, SIMILARITY:Arabidopsis] [LE:20474] [RE:21205] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_31510_f3_55 2108 5880 627 208 435 6.0e-41 Description sp:[LN:3MGA_HAEIN] [AC:P44321] [GN:TAG:HI0654] [OR:HAEMOPHILUS INFLUENZAE] [EC:3.2.2.20] [DE:GLYCOSYLASE) (TAG)] [SP:P44321] [DB:swissprot] >pir:[LN:G64084] [AC:G64084] [PN:3-methyladenine DNA glycosylase, I] [CL:3-methyladenine DNA glycosylase I] [OR:Haemophilus influenzae] [EC:3.2.2.—] [DB:pir2] >gp:[GI:g1573653] [LN:U32748] [AC:U32748:L42023] [PN:DNA-3-methyladenine glycosidase I (tagI) [GN:H10654] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 63 of 163 of the complete genome.] [NT:similar to SP:P05100 GB:J02606 GB:X03845 PID:147920] [LE:6773] [RE:7330] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_33395050_c2_95 2109 5881 618 205 577 5.3e-56 Description sp:[LN:YSXC_BACSU] [AC:P38424] [GN:YSXC] [OR:BACILLUS SUBTILIS] [DE:(ORFX)] [SP:P38424] [DB:swissprot] >pir:[LN:I40422] [AC:I40422:C69987:S45102] [PN:conserved hypothetical protein ysxC] [GN:ysxC] [CL:Bacillus subtilis conserved hypothetical protein ysxC:translation elongation factor Tu homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g496558] [LN:BSLONLA] [AC:X76424] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis lon gene for protease La.] [NT:orfX] [SP:P38424] [LE:2669] [RE:3256] [DI:direct] >gp:[GI:e1184068:g2635284] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysxC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [SP:P38424] [LE:83852] [RE:84439] [DI:complement] >gp:[GI:e1165379:g1770079] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysxC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [SP:P38424] [LE:85468] [RE:86055] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_33517_c1_82 2110 5882 1077 358 258 2.8e-21 Description pir:[LN:E69834] [AC:E69834] [PN:hypothetical protein yhjN] [GN:yhjN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183059:g2633393] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhjN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [LE:130891] [RE:132045] [DI:complement] >gp:[GI:e324987:g2226186] [LN:BSY14081] [AC:Y14081] [PN:hypothetical protein] [GN:yhjN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 92 degrees:region between comK and addAB.] [NT:TTG start; Similarity to a hypothetical protein] [LE:13186] [RE:14340] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_34642092_c1_85 2111 5883 1284 427 907 5.7e-91 Description sp:[LN:FOLC_BACSU] [AC:Q05865] [GN:FOLC] [OR:BACILLUS SUBTILIS] [EC:6.3.2.17] [DE:SYNTHETASE) (FPGS)] [SP:Q05865] [DB:swissprot] >pir:[LN:B40646] [AC:B40646:B33490:D69626] [PN:folyl-polyglutamate synthetase folC] [GN:folC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142936] [LN:BACFOLC] [AC:L04520] [PN:folyl-polyglutamate synthetase] [GN:folC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_strain PY79, strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis valyl tRNA synthetase (valS) gene, 3′ end cds; folyl-polyglutamate synthetase (folC) gene, complete cds; comCgene, 5′ end cds.] [LE:231] [RE:1523] [DI:direct] >gp:[GI:e1184057:g2635273] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:folyl-polyglutamate synthetase] [GN:folC] [FN:folate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.2.17] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:Q05865] [LE:69443] [RE:70735] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_3914012_c2_98 2112 5884 690 229 710 4.3e-70 Description gp:[GI:g2589182] [LN:SAU89396] [AC:U89396] [PN:uroporphyrinogen III synthase] [GN:hemD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [EC:4.2.1.75] [DE:Staphylococcus aureus hemCDBL gene cluster: porphobilinogendeaminase (hemC), uroporphyrinogen III synthase (hemD), d-aminolevulinic acid dehydratase (hemB) and GSA-1-aminotransferase (hemL) genes, complete cds.] [LE:1167] [RE:1835] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_4080443_c3_113 2113 5885 1296 431 2041 3.9e-211 Description sp:[LN:GSA_STAAU] [AC:O34092] [GN:HEML] [OR:STAPHYLOCOCCUS AUREUS] [EC:5.4.3.8] [DE:(GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT)] [SP:O34092] [DB:swissprot] >gp:[GI:g2589184] [LN:SAU89396] [AC:U89396] [PN:GSA-1-aminotransferase] [GN:hemL] [OR:Staphylococcus aureus] [DB:genpept-bct2] [EC:5.4.3.8] [DE:Staphylococcus aureus hemCDBL gene cluster:porphobilinogendeaminase (hemC), uroporphyrinogen III synthase (hemD), d-aminolevulinic acid dehydratase (hemB) and GSA-1-aminotransferase (hemL) genes, complete cds.] [LE:2857] [RE:4143] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_439183_f1_14 2114 5886 297 98 208 6.8e-17 Description gp:[GI:e1165375:g1770076] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysoC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:80592] [RE:81206] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_4729837_c2_92 2115 5887 624 207 416 6.1e-39 Description sp:[LN:YMAB_BACSU] [AC:P50619] [GN:YMAB] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 23.4 KD PROTEIN IN NRDF-CWLC INTERGENIC REGION] [SP:P50619] [DB:swissprot] >pir:[LN:D69883] [AC:D69883] [PN:hypothetical protein ymaB] [GN:ymaB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e218063:g1154634] [LN:BSNRDYMA] [AC:Z68500] [PN:YmaB] [GN:ymaB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis cwlC, nrdE, nrdF, ymaA and ymaB genes.] [NT:no similarities, cannot be inactivated] [SP:P50619] [LE:4450] [RE:5070] [DI:direct] >gp:[GI:e1183399:g2634124] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ymaB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [LE:90169] [RE:90789] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_4891876_f3_45 2116 5888 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_500052_c3_118 2117 5889 669 222 440 1.8e-41 Description sp:[LN:RADC_BACSU] [AC:Q02170] [GN:YSXA] [OR:BACILLUS SUBTILIS] [DE:DNA REPAIR PROTEIN RADC HOMOLOG (ORFB)] [SP:Q02170] [DB:swissprot] >pir:[LN:B45239] [AC:B45239:B45240:I39881:A69987] [PN:DNA repair protein homolog ysxA] [GN:ysxA] [CL:DNA repair protein radc] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142854] [LN:BACDIVREG] [AC:M96343] [GN:orfB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_strain PY79, strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis orfA, orfB, mreB, mreC, mreD, minC, and minD genes, complete coding regions.] [NT:homologous to E. coli radC gene product and to] [LE:762] [RE:1457] [DI:direct] >gp:[GI:g143162] [LN:BACMAFMREB] [AC:L08793] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis maf gene, complete cds; orfB, complete cds; mreB gene, 5′ end.] [NT:putative] [LE:1557] [RE:2252] [DI:direct] >gp:[GI:e1184053:g2635269] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysxA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to DNA repair protein] [SP:Q02170] [LE:65971] [RE:66666] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_5268775_c3_105 2118 5890 960 319 138 8.5e-07 Description pir:[LN:H69986] [AC:H69986 ] [PN:hypothetical protein ysoA] [GN:ysoA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184073:g2635289] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ysoA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:91788] [RE:92720] [DI:complement] >gp:[GI:e1165372:g1770073] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysoA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:77187] [RE:78119] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_5860827_c3_110 2119 5891 1347 448 1172 4.8e-119 Description sp:[LN:HEM1_BACSU] [AC:P16618] [GN:HEMA] [OR:BACILLUS SUBTILIS] [EC:1.2.1.—] [DE:GLUTAMYL-TRNA REDUCTASE, (GLUTR)] [SP:P16618] [DB:swissprot] >pir:[LN:A35252] [AC:A35252:C69639] [PN:glutamyl-tRNA reductase, hemA:hemA protein] [GN:hemA] [CL:glutamyl-tRNA reductase] [OR:Bacillus subtilis] [EC:1.2.1.—] [DB:pir2] >gp:[GI:g143035] [LN:BACHEMAXC] [AC:M57676:M32130] [PN:NAD(P)H:glutamyl-transfer RNA reductase] [GN:hemA] [OR:Bacillus subtilis] [SR:B. subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis hemAXCDBL gene cluster.] [NT:The product of this hemA gene is not an] [LE:232] [RE:1599] [DI:direct] >gp:[GI:e1184066:g2635282] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:glutamyl-tRNA reductase] [GN:hemA] [FN:porphyrin biosynthesis] [OR:Bacillus subtilis] (DB:genpept-bct1] [EC:1.2.1.—] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P16618] [LE:81736] [RE:83103] [DI:complement] >gp:[GI:e1165381:g1770081] [LN:BSZ75208] [AC:Z75208] [PN:NAD(P)H:glutamyl-transfer RNA reductase] [GN:hemA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.3.1.37] [DE:B. subtilis genomic sequence 89009bp.] [NT:NAD(P)H:glutamyl-t-RNA reductase of the C-5 pathway] [SP:P16618] [LE:86804] [RE:88171] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_6845382_f2_26 2120 5892 219 72 72 0.034 Description gp:[GI:e1358367:g3979946] [LN:CEY18D10A] [AC:AL034393] [GN:Y18D10A.14] [OR:Caenorhabditis elegans] [DB genpept-inv1] [DE:Caenorhabditis elegans cosmid Y18D10A, complete sequence.] [LE:113813:114013:114203] [RE:113961:114112:114448] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_7050319_c2_90 2121 5893 237 78 226 8.4e-19 Description sp:[LN:RL35_BACSU] [AC:P55874] [GN:RPMI] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L35] [SP:P55874] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_7283437_c1_89 2122 5894 162 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_806510_c1_86 2123 5895 714 237 189 7.0e-15 Description sp:[LN:LEP3_BACSU] [AC:P15378] [GN:COMC] [OR:BACILLUS SUBTILIS] [EC:3.4.99.—] [DE:(LATE COMPETENCE PROTEIN COMC)] [SP:P15378] [DB:swissprot] >pir:[LN:A33490] [AC:A33490:E40646:F40646:B69602] [PN:type IV prepilin peptidase, :genetic transformation late competence protein ComC] [GN:comC] [CL:type IV prepilin peptidase] [OR:Bacillus subtilis] [EC:3.4.99.—] [DB:pir2] >gp:[GI:g142704] [LN:BACCOMC] [AC:M30805] [PN:late competence protein] [GN:comC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain IS75) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis late competence protein (comC) gene, complete cds.] [LE:819] [RE:1565] [DI:direct] >gp:[GI:e1184056:g2635272] [:LN:BSUB0015] [AC:Z99118:AL009126] [PN:DNA-binding protein] [GN:comC] [FN:required for the processing and translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P15378] [LE:68557] [RE:69303] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_820253_f1_15 2124 5896 297 98 206 1.1e-16 Description gp:[GI:e1165375:g1770076] [LN:BSZ75208] [AC:Z75208] [PN:hypothetical protein] [GN:ysoC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:unknown function; putative] [LE:80592] [RE:81206] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000992_978562_c1_79 2125 5897 861 286 1261 1.8e-128 Description sp:[LN:HEM2_STAAU] [AC:P50915] [GN:HEMB] [OR:STAPHYLOCOCCUS AUREUS] [EC:4.2.1.24] [DE:SYNTHASE) (ALAD) (ALADH)] [SP:P50915] [DB:swissprot] >gp:[GI:g2589183] [LN:SAU89396] [AC:U89396] [PN:d-aminolevulinic acid dehydratase] [GN:hemB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [EC:4.2.1.24] [DE:Staphylococcus aureus hemCDBL gene cluster: porphobilinogendeaminase (hemC), uroporphyrinogen III synthase (hemD), d-aminolevulinic acid dehydratase (hemB) and GSA-1-aminotransferase (hemL) genes, complete cds.] [LE:1838] [RE:2809] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10266875_c2_761 2126 5898 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10463_c2_803 2127 5899 504 167 315 3.1e-28 Description sp:[LN:YTXG_BACSU] [AC:P40779] [GN:YTXG] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 15.7 KD PROTEIN IN MURC-AROA INTERGENIC REGION (ORF1)] [SP:P40779] [DB:swissprot] >pir:[LN:D70003] [AC:D70003:S71001] [PN:general stress protein homolog ytxG] [GN:ytxG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g556015] [LN:BACUNAM] [AC:L31845] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis UDP-N-acetylmuramate-alanine ligase gene, partial cds, and 3 ORF's.] [NT:ORF1] [LE:1211] [RE:1642] [DI:direct] >gp:[GI:e1185851:g2635462] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytxG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:alternate gene name: csb40; similar to general] [SP:P40779] [LE:48897] [RE:49328] [DI:complement] >gp:[GI:g2293217] [LN:AF008220] [AC:AF008220] [PN:YtxG] [GN:ytxG] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:131098] [RE:131529] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10548383_f1_3 2128 5900 237 78 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10564375_f3_510 2129 5901 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1056693_c2_793 2130 5902 1101 366 774 7.1e-77 Description pir:[LN:B69998] [AC:B69998] [PN:endo-1,4-beta-glucanase homolog ytoP] [GN:ytoP] [CL:thermophilic aminopeptidase I alpha chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185859:g2635470] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytoP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to endo-1,4-beta-glucanase] [LE:56559] [RE:57632] [DI:complement] >gp:[GI:g2293210] [LN:AF008220] LAC:AF008220] [PN:YtoP] [GN:ytoP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to hypothetical protein f356 from E. coli] [LE:122794] [RE:123867] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10588877_f1_52 2131 5903 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10667002_f1_111 2132 5904 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_109430_f3_485 2133 5905 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_10969427_f3_448 2134 5906 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_112525_f3_546 2135 5907 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_116337_f2_251 2136 5908 627 208 199 6.1e-16 Description gp:[GI:g3043872] [LN:LLU95837] [AC:U95837] [PN:transmembrane protein Tmp3] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis transmembrane protein Tmp3 gene, partial cds.] [NT:PBP1A homolog; identified as a fusion to a signal] [LE:<1] [RE:588] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_11881325_f3_568 2137 5909 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1203827_c3_893 2138 5910 639 212 475 3.4e-45 Description sp:[LN:RISA_ACTPL] [AC:P50854] [GN:RIBE:RIBB] [OR:ACTINOBACILLUS PLEUROPNEUMONIAE] [SR:, HAEMOPHILUS PLEUROPNEUMONIAE] [EC:2.5.1.9] [DE:RIBOFLAVIN SYNTHASE ALPHA CHAIN,] [SP:P50854] [DB:swissprot] >gp:[GI:g1173517] [LN:APU27202] [AC:U27202] [PN:riboflavin synthase alpha subunit] [GN:ribB] [OR:Actinobacillus pleuropneumoniae] [DB:genpept-bct1] [DE:Actinobacillus pleuropneumoniae riboflavin biosynthesis operon, riboflavin-specific deaminase (ribG), riboflavin synthase alphasubunit (ribB), bifunctional GTP cyclohydraseII/3,4-dihydroxy-2-butanone-4-phosphate synthase (ribA), and riboflavin synthase beta subunit (ribH) genes, complete cds.] [NT:lumazine synthase; similar to Bacillus subtilis] [LE:1685] [RE:2332] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1209417_c3_959 2139 5911 1704 567 797 2.6e-79 Description sp:[LN:PHOR_BACSU] [AC:P23545] [GN:PHOR] [OR:BACILLUS SUBTILIS] [EC:2.7.3.—] [DE:ALKALINE PHOSPHATASE SYNTHESIS SENSOR PROTEIN PHOR,] [SP:P23545] [DB:swissprot] >pir:[LN:A27650] [AC:A27650:G69676] [PN:phosphate response regulator histidine kinase phoR] [GN:phoR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143331] [LN:BACPHORP] [AC:M23549] [PN:alkaline phosphatase regulatory protein] [GN:phoR] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis alkaline phosphatase regulatory protein (phoPgene, 3′ end and phoR gene, complete cds).] [LE:85] [RE:1824] [DI:direct] >gp:[GI:e1184159:g2635375] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:two-component sensor histidine kinase] [GN:phoR] [FN:involved in phosphate regulation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P23545] [LE:180011] [RE:181750] [DI:complement] >gp:[GI:g2293271] [LN:AF008220] [AC:AF008220] [PN:signal transduction protein kinase] [GN:phoR] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:201317] RE:203056] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_125880_f2_361 2140 5912 309 102 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1284381_c1_652 2141 5913 741 246 297 2.5e-26 Description sp:[LN:TAL_METJA] [AC:Q58370] [GN:TAL:MJ0960] [OR:METHANOCOCCUS JANNASCHII] (EC:2.2.1.—] [DE:TRANSALDOLASE-LIKE PROTEIN,] [SP:Q58370] [DB:swissprot] >pir:[LN:H64419] [AC:H64419] [PN:transaldolase,] [CL:Bacillus subtilis 23K phosphoprotein orfU] [OR:Methanococcus jannaschii] [EC:2.2.1.2] [DB:pir2] [MP:REV892437-891784] >gp:[GI:g1591624] [LN:U67539] [AC:U67539:L77117] [PN:transaldolase] [GN:MJ0960] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 81 of 150 of the complete genome.] [NT:similar to SP:P19669 PID:853766 GB:AL009126 percent] [LE:7990] [RE:8643] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_12894378_f2_347 2142 5914 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13001537_f3_444 2143 5915 249 82 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13089052_f3_538 2144 5916 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1352042_c2_777 2145 5917 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13678452_c1_628 2146 5918 1263 420 438 2.9e-41 Description sp:[LN:ECSB_BACSU] [AC:P55340] [GN:ECSB:PRST] [OR:BACILLUS SUBTILIS] [DE:PROTEIN ECSB] [SP:P55340] [DB:swissprot] >pir:[LN:G69619] [AC:G69619] [PN:ABC transporter (membrane protein) ecsB] [GN:ecsB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e183450:g1177254] [LN:BSECSABCG] [AC:X87807] [PN:hypothetical EcsB protein] [GN:ecsB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ecsA, ecsB, and ecsC genes.] [SP:P55340] [LE:984] [RE:2210] [DI:direct] >gp:[GI:e1183007:g2633341] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:ABC transporter (membrane protein)] [GN:ecsB] [FN:regulates both components of the protein] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name: prsT, yhaC] [SP:P55340] [LE:78149] [RE:79375] [DI:direct] >gp:[GI:e324951:g2226114] [LN:BSY14077] [AC:Y14077] [PN:Hypothetical protein] [GN:yhaC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subitlis 10.6 Kb chromosomal DNA:glyB-prsA region.] [NT:Identified as ecsB. Hypothetical integral membrane] [SP:P55340] [LE:1538] [RE:2764] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13722338_c3_943 2147 5919 507 168 505 2.3e-48 Description pir:[LN:F69992] [AC:F69992] [PN:thiol peroxidase homolog ytgI] [GN:ytgI] [CL:thiol peroxidase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185822:g2635433] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytgI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to thiol peroxidase] [LE:18998] [RE:19501] [DI:complement] >gp:[GI:g2293238] [LN:AF008220] [AC:AF008220] [PN:YtgI] [GN:ytgI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to tagD protein from V. cholerae] [LE:160926] [RE:161429] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13723318_c3_945 2148 5920 1149 382 1230 3.4e-125 Description pir:[LN:JE0388] [AC:JE0388] [PN:alanine dehydrogenase,] [OR:Enterobacter aerogenes] [EC:1.4.1.1] [DB:pir3] >gp:[GI:d1041279:g4803749] [LN:AB013821] [AC:AB013821] [PN:alanine dehydrogenase] [GN:aladh] [OR:Enterobacter aerogenes] [SR:Enterobacter aerogenes DNA] [DB:genpept-bct1] [EC:1.4.1.1] [DE:Enterobacter aerogenes aladh gene for alanine dehydrogenase, complete cds.] [LE:174] [RE:1307] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13787912_c3_891 2149 5921 1524 507 118 1.7e-05 Description pir:[LN:D64924] [AC:D64924] [PN:hypothetical protein b1668] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1549279] [LN:ECUG8703] [AC:U68703] [OR:Escherichia coli] [DB:genpept-bct1] [DE: Escherichia coli K-12 MG1655 genome, ribC-pykF region.] [NT:hypothetical protein] [LE:4535] [RE:6139] [DI:direct] >gp:[GI:g1787957] [LN:AE000262] [AC:AE000262:U00096] [PN:orf, hypothetical protein] [GN:b1668] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 152 of 400 of the complete genome.] [NT:o534; This 534 aa ORF is 38 pct identical (6 gaps)] [LE:872] [RE:2476] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13852187_f1_136 2150 5922 186 61 113 4.5e-06 Description pir:[LN:S77632] [AC:577632:S52761] [PN:probable integrase] [GN:int] [OR:Staphylococcus aureus phage phi-13] [DB:pir2] >gp:[GI:g758229] [LN:PHI13INT] [AC:X82312] [PN:integrase] [GN:int] [FN:integration of phi-13 in S. aureus genome] [OR:Bacteriophage phi-13] [DB:genpept-phg] [DE:Bacteriophage phi-13 integrase gene.] [LE:461] [RE:1498] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_13939027_f3_560 2151 5923 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14251933_f2_239 2152 5924 663 220 818 1.5e-81 Description pir:[LN:A37146] [AC:A37146:A44901:S11354:C69699:I39962] [PN:ribosomal protein S4:ribosomal protein BS4 (rpsD)] [GN:rpsD] [CL:Escherichia coli ribosomal protein S4] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143467] [LN:BACRPSD] [AC:M59358:M34718] [PN:ribosomal protein S4] [GN:rpsD] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168, isolate BR151] DNA] [DB:genpept-bct1] [DE:B. subtilis ribosomal protein S4 gene, complete cds and tyrosyl tRNA synthetase (tyrS] gene, 3′ end.] [LE:756] [RE:1358] [DI:direct] >gp:[GI:e1185839:g2635450] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:ribosomal protein S4 (BS4)] [GN:rpsD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [SP:P21466] [LE:37035] [RE:37637] [DI:direct] >gp:[GI:g2293319] [LN:AF008220] [AC:AF008220] [PN:ribosomal protein S4] [GN:rpsD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:142790] [RE:143392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14460877_c3_963 2153 5925 138 45 131 2.8e-08 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14460882_c1_649 2154 5926 177 58 227 6.6e-19 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknownl [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14460932_c1_612 2155 5927 177 58 211 3.3e-17 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14460932_f2_226 2156 5928 168 55 196 1.3e-15 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14656327_c2_751 2157 5929 624 207 799 1.6e-79 Description gp:[GI:g1916729] [LN:AF134905] [AC:AF134905:U76550] [PN:CadD] [GN:cadD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pRW001 CadD (cadD) gene, complete cds.] [NT:confers low level cadmium resistance] [LE:2328] [RE:2957] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14658152_f3_589 2158 5930 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14742937_c2_774 2159 5931 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14877316_f1_64 2160 5932 483 160 407 5.5e-38 Description sp:[LN:YEBR_ECOLI] [AC:P76270:O07976:O07978] [GN:YEBR] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 20.3 KD PROTEIN IN PRC-PPHA INTERGENIC REGION] [SP:P76270:O07976:O07978] [DB:swissprot] >pir:[LN:H64944] [AC:H64944] [PN:probable membrane protein b1832] [CL:hypothetical protein YKL069w] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1016364:g1736473] [LN:D90826] [AC:D90826:AB001340] [GN:YKL069W, YKL340] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #335 (40.9–41.3 min.).] [NT:ORF_ID:o335#13; similar to [SwissProt Accession] [LE:16795] [RE:17346] [DI:complement] >gp:[GI:d1016369:g1736479] [LN:D90827] [AC:D90827:AB001340] [GN:YKL069W, YKL340] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #336 (41.2–41.6 min.).] [NT:ORF_ID:o335#13; similar to [SwissProt Accession] [LE:2748] [RE:3299] [DI:complement] >gp:[GI:g1788136] [LN:AE000277] [AC:AE000277:U00096] [PN:orf, hypothetical protein] [GN:b1832] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 167 of 400 of the complete genome.] [NT:f183; residues 72–127 are 57 pct identical to] [LE:7076] [RE:7627] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_14882928_c3_923 2161 5933 1098 365 1279 2.2e-130 Description gp:[GI:e220317:g1177684] [LN:SXCCPA] [AC:X95439] [PN:chorismate mutase] [GN:aroA] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [EC:5.4.99.5] [DE:S. xylosus aroA, ccpA, acuC and acuA genes.] [LE:<1] [RE:807] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_15650303_c3_882 2162 5934 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_163151_c3_886 2163 5935 1248 415 1800 1.3e-185 Description sp:[LN:METK_STAAU] [AC:P50307] [GN:METK] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.5.1.6] [DE:ADENOSYLTRANSFERASE) (ADOMET SYNTHETASE)] [SP:P50307] [DB:swissprot] >gp:[GI:g10203171] [LN:SAU36379] [AC:U36379] [PN:S-adenosylmethionine synthetase] [FN:catalyses the synthesis of SAM] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus S-adenosylmethionine synthetase gene, complete cds.] [NT:SAM synthetase] [LE:212] [RE:1405] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_16533442_c2_738 2164 5936 522 173 546 1.0e-52 Description gp:[GI:g1381681] [LN:BSU58864] [AC:U58864] [PN:CspR] [GN:cspR] [OR:Bacillus subtilis] [SR:Bacillus subtilis strain=JH642] [DB:genpept-bct1] [DE:Bacillus subtilis methylase homolog (cspR) gene, complete cds.] [NT:methylase homolog] [LE:573] [RE:1046] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_16586012_f2_308 2165 5937 588 195 456 3.5e-43 Description pir:[LN:E69999] [AC:E69999] [PN:hypothetical protein ytqB] [GN:ytqB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185922:g2635533] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytqB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:122275] [RE:122859] [DI:direct] >gp:[GI:g2293301] [LN:AF008220] [AC:AF008220] [PN:YtqB] [GN:ytqB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:57568] [RE:58152] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_165908_f2_353 2166 5938 507 168 182 3.8e-14 Description sp:[LN:YHGC_BACSU] [AC:P38049] [GN:YHGC] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 18.8 KD PROTEIN IN ECSC-PBPF INTERGENIC REGION] [SP:P38049] [DB:swissprot] >pir:[LN:B40614] [AC:B40614:F69832] [PN:conserved hypothetical protein yhgC:hypothetical protein X (pbpF 5′ region)] [GN:yhgC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g304160] [LN:BACPBPF] [AC:L10630] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis penicillin-binding protein (pbpF) gene, 5′ end.] [NT:product unknown] [LE:247] [RE:747] [DI:complement] >gp:[GI:e1183012:g2633346] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhgC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name: yixC; similar to hypothetical] [SP:P38049] [LE:83202] [RE:83702] [DI:complement] >gp:[GI:e325006:g2226228] [LN:BSY14083] [AC:Y14083] [PN:Hypothetical protein] [GN:yixC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 76–78 degrees: between glyB-aprE.] [NT:See Swiss Prot P38049; YIXC_BACSU] [SP:P38049] [LE:3061] [RE:3561] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_16835053_c2_758 2167 5939 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_16994043_c3_933 2168 5940 1128 375 81 0.0062 Description pir:[LN:E69106] [AC:E69106] [PN:hypothetical protein MTH1793] [GN:MTH1793] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2622925] [LN:AE000934] [AC:AE000934:AE000666] [PN:unknown] [GN:MTH1793] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct2] [DE:Methanobacterium thermoautotrophicum from bases 1640298 to 1655421 (section 140 of 148) of the complete genome.] [NT:Function Code:14.00- Unknown, ; similar to,] [LE:89] [RE:790] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_189437_f1_34 2169 5941 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_191713_c3_904 2170 5942 11091 3696 1884 6.9e-195 Description gp:[GI:e286140:g4775551] [LN:SACTORF13] [AC:Y09928] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus CTORF1365, partial.] [NT:CT0RF1365] [LE:<1] [RE:>3982] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_19565876_c3_915 2171 5943 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1960937_c3_964 2172 5944 177 58 228 5.1e-19 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_19742842_c2_769 2173 5945 849 282 776 4.4e-77 Description pir:[LN:C70040] [AC:C70040] [PN:plant-metabolite dehydrogenase homolog yvgN] [GN:yvgN] [CL:aldehyde reductase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249784:g2832788] [LN:BS43KBDNA] [AC:AJ223978] [PN:putative reductase protein, YvgN] [GN:yvgN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7kB DNA fragment from yvsA to yvqA.] [LE:646] [RE:1476] [DI:direct] >gp:[GI:e1186028:g2635853] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:alternate gene name:yvsB; similar to] [LE:26261] [RE:27091] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_19770437_c2_830 2174 5946 1332 443 1018 9.9e-103 Description pir:[LN:A69998] [AC:A69998] [PN:hypothetical protein ytoI] [GN:ytoI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184176:g2635392] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ytoI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:201244] [RE:202563] [DI:complement] >gp:[GI:g2293258] [LN:AF008220] [AC:AF008220] [PN:YtoI] [GN:ytoI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity with hypothetical protein 3 from] [LE:180504] [RE:181823] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1991325_f3_469 2175 5947 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_19922162_c3_857 2176 5948 1161 386 527 1.1e-50 Description gp:[GI:g3688818] [LN:AF084104] [AC:AF084104] [PN:hypothetical protein] [OR:Bacillus firmus] [DB:genpept-bct2] [DE:Bacillus firmus AcsA (acsA) gene, partial cds; SspA (sspA), hypothetical protein, maltose transportor ATP-binding protein (malK), leucine-rich protein transcriptional regulator (lrpR), hypothetical proteins, ABC transporter ATP-binding protein (natC), NatA (natA), NatB (natB), and hypothetical protein genes, complete cds; and SpoIIIJ (spoIIIJ) gene, partial cds.] [NT:Orf10; similar to hypothetical protein YheB from] [LE:5845] [RE:6957] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_1992943_f3_561 2177 5949 747 248 104 2.3e-05 Description gp:[GI:g160225] [LN:PFACSPI] [AC:M18821] [PN:circumsporozoite protein] [GN:CSP] [OR:Plasmodium yoelii] [SR:Plasmodium yoelii (strain 17X NL) DNA] [DB:genpept-inv1] [DE:Plasmodium yoelii circumsporozoite protein (CSP) gene, 5′ end.] [NT:precursor] [LE:1] [RE:>420] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_20365892_c1_731 2178 5950 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2051502_f2_250 2179 5951 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_20706557_c3_860 2180 5952 1254 417 592 1.4e-57 Description pir:[LN:A69819] [AC:A69819] [PN:probable phosphoesterase, yhaO] [GN:yhaO] [CL:unassigned probable phosphoesterases:phosphoesterase core homology] [OR:Bacillus subtilis] [EC:3.1.—.—] [DB:pir2] >gp:[GI:e1182993:g2633327] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhaO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:64822] [RE:66048] [DI:direct] >gp:[GI:e324934:g2226129] [LN:BSY14078] [AC:Y14078] [PN:Hypothetical protein] [GN:yhaO] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subitlis 8.7 Kb chromosomal DNA:downstream glyB-prsA region.] [NT:similarity to exonuclease sbcD from Escherichia] [LE:4292] [RE:5518] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_20834812_f2_339 2181 5953 306 101 86 0.0039 Description pir:[LN:S77632] [AC:S77632:S52761] [PN:probable integrase] [GN:int] [OR:Staphylococcus aureus phage phi-13] [DB:pir2] >gp:[GI:g758229] [LN:PHI13INT] [AC:X82312] [PN:integrase] [GN:int] [FN:integration of phi-13 in S. aureus genome] [OR:Bacteriophage phi-13] [DB:genpept-phg] [DE:Bacteriophage phi-13 integrase gene.] [LE:461] [RE:1498] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_20901713_c3_939 2182 5954 1707 568 613 8.2e-60 Description pir:[LN:G70002] [AC:G70002] [PN:hypothetical protein ytwP] [GN:ytwP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185834:g2635445] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytwP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:31035] [RE:32723] [DI:complement] >gp:[GI:g2293228] [LN:AF008220] [AC:AF008220] [PN:YtwP] [GN:ytwP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to fcrA protein precursor from] [LE:147704] [RE:149392] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_20947781_f2_348 2183 5955 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2115812_f2_222 2184 5956 1113 370 843 3.5e-84 Description pir:[LN:G69869] [AC:G69869] [PN:Xaa-Pro dipeptidase homolog ykvY] [GN:ykvY] [CL:X-Pro aminopeptidase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184976:g2633757] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to Xaa-Pro dipeptidase] [LE:58367] [RE:59458] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2117077_f3_536 2185 5957 366 121 195 1.6e-15 Description pir:[LN:A70341] [AC:A70341] [PN:conserved hypothetical protein aq_449] [GN:aq_449] [CL:hypothetical protein MJ1523] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983116] [LN:AE000690] [AC:AE000690:AE000657] [PN:hypothetical protein] [GN:aq_449] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 22 of 109 of the complete genome.] [LE:10789] [RE:11163] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2126250_f2_305 2186 5958 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_21491462_c1_722 2187 5959 1161 386 1188 9.6e-121 Description sp:[LN:CISZ_BACSU] [AC:P39120:O34435] [GN:CITZ:CITA2] [OR:BACILLUS SUBTILIS] [EC:4.1.3.7] [DE:CITRATE SYNTHASE II,] [SP:P39120:O34435] [DB:swissprot] >pir:[LN:G69600] [AC:G69600:I40381] [:PN:citrate synthase II,] [GN:citZ] [CL:citrate (si)-synthase] [OR:Bacillus subtilis] [EC:4.1.3.—] [DB:pir2] >gp:[GI:e1184163:g2635379] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:citrate synthase II] [GN:citZ] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.3.7] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:alternate gene name: citA2] [SP:P39120] [LE:185094] [RE:186212] [DI:complement] >gp:[GI:g2293267] [LN:AF008220] [AC:AF008220] [PN:citrate synthase subunit II] [GN:citZ] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:196855] [RE:197973] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_21520887_c2_781 2188 5960 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_21522010_f2_331 2189 5961 1725 574 2393 2.0e-248 Description sp:[LN:PPCK_STAAU] [AC:P51065] [GN:PCKA] [OR:STAPHYLOCOCCUS AUREUS] [EC:4.1.1.49] [DE:PHOSPHOENOLPYRUVATE CARBOXYKINASE [ATP],] [SP:P51065] [DB:swissprot] >gp:[GI:g1255262] [LN:SAU51133] [AC:U51133] [PN:phosphoenolpyruvate carboxykinase] [GN:pcka] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus phosphoenolpyruvate carboxykinase (pcka) gene, complete cds.] [LE:160] [RE:1752] [DI:direct] >gp:[GI:g860732] [LN:STAPEPCK] [AC:L42943] [PN:phosphoenolpyruvate carboxykinase] [GN:pckA] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:4.1.1.32] [DE:Staphylococcus aureus (clone KIN50) phosphoenolpyruvatecarboxykinase (pckA) gene, complete cds.] [NT:PEPCK; homologue] [LE:409] [RE:2001] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_21523400_f2_356 2190 5962 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_21645967_f3_575 2191 5963 993 330 368 7.5e-34 Description sp:[LN:PRSA_BACSU] [AC:P24327] [GN:PRSA] [OR:BACILLUS SUBTILIS] [DE:PROTEIN EXPORT PROTEIN PRSA PRECURSOR] [SP:P24327] [DB:swissprot] >pir:[LN:S15269] [AC:S15269:I40003:H69682] [PN:post-translocation molecular chaperone prsA:33K lipoprotein prsA] [GN:prsA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g39782] [LN:BS33KDA] [AC:X57271:S67658] [PN:33kDa lipoprotein] [GN:prsA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis prsA gene for a 33kDa lipoprotein.] [SP:P24327] [LE:63] [RE:941] [DI:direct] >gp:[GI:e1182997:g2633331] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:molecular chaperonin] [GN:prsA] [FN:essential for the stability of secreted] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [SP:P24327] [LE:70340] [RE:71218] [DI:complement] >gp:[GI:e325181:g2226124] [LN:BSY14077] [AC:Y14077] [PN:33kDa lipoprotein] [GN:prsA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subitlis 10.6 Kb chromosomal DNA:glyB-prsA region.] [NT:See Swiss Prot P24327] [SP:P24327] [LE:9695] [RE:10573] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2189718_f3_412 2192 5964 1371 456 1309 1.4e-133 Description sp:[LN:CYCA_ECOLI] [AC:P39312] [GN:CYCA:DAGA] [OR:ESCHERICHIA COLI] [DE:D-SERINE/D-ALANINE/GLYCINE TRANSPORTER] [SP:P39312] [DB:swissprot] >pir:[LN:S56433] [AC:S56433:C65232] [PN:d-serine/d-alanine/glycine transporter] [GN:cycA] [CL:arginine permease] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g537049] [LN:ECOUW93] [AC:U14003] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [NT:ORF_o470] [LE:120696] [RE:122108] [DI:direct] >gp:[GI:g1790653] [LN:AE000492] [AC:AE000492:U00096] [PN:transport of D-alanine, D-serine, and glycine] [GN:cycA] [FN:transport; Transport of small molecules:Amino] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 382 of 400 of the complete genome.] [NT:o470; 100 pct identical amino acid sequence and] [LE:2436] [RE:3848] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22078331_f3_564 2193 5965 252 83 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22164757_f2_244 2194 5966 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22271932_c1_651 2195 5967 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22277327_c3_968 2196 5968 1371 456 496 2.0e-47 Description sp:[LN:DNAB_BACSU] [AC:P07908] [GN:DNAB] [OR:BACILLUS SUBTILIS] [DE:REPLICATION INITIATION AND MEMBRANE ATTACHMENT PROTEIN] [SP:P07908] [DB:swissprot] >pir:[LN:B26580] [AC:B26580:A24720:A69617] [PN:chromosome replication initiation/membrane attachment protein dnaB:dnaB protein] [GN:dnaB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142863] [LN:BACDNAB] [AC:M15183] [PN:replication initiation protein] [GN:dnaB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_strain PY79, strain W168) DNA] [DB:genpept-bct1] [DE:B. subtilis dnaB gene, encoding the replication initiation and membrane attachment protein, complete cds, clone pdnaB12.] [NT:The part of the protein encoded by 634–693 binds to] [LE:397] [RE:1815] [DI:direct] >gp:[GI:e1184148:g2635364] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:membrane attachment protein] [GN:dnaB] [FN:initiation of chromosome replication (DNA) [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:168092] [RE:169510] [DI:complement] >gp:[GI:e1165285:g1769995] [LN:BSZ75208] [AC:Z75208] [PN:replication initiation protein] [GN:dnaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic sequence 89009bp.] [NT:the part of the protein encoded by 634–693 binds to] [SP:P07908] [LE:397] [RE:1815] [DI:direct] >gp:[GI:g2293280] [LN:AF008220] [AC:AF008220] [PN:DnaB] [GN:dnaB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:213557] [RE:214975] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22391432_f3_562 2197 5969 525 174 288 2.3e-25 Description pir:[LN:S77632] [AC:S77632:S52761] [PN:probable integrase] [GN:int] [OR:Staphylococcus aureus phage phi-13] [DB:pir2] >gp:[GI:g758229] [LN:PHI13INT] [AC:X82312] [PN:integrase] [GN:int] [FN:integration of phi-13 in S. aureus genome] [OR:Bacteriophage phi-13] [DB:genpept-phg] [DE:Bacteriophage phi-13 integrase gene.] [LE:461] [RE:1498] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22459692_f1_125 2198 5970 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_22664125_c2_832 2199 5971 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23438837_f3_600 2200 5972 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23468812_f1_141 2201 5973 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23485443_c1_709 2202 5974 1239 412 931 1.6e-93 Description sp:[LN:THII_BACSU] [AC:O34595] [GN:THII] [OR:BACILLUS SUBTILIS] [DE:PROBABLE THIAMIN BIOSYNTHESIS PROTEIN THII] [SP:O34595] [DB:swissprot] >pir:[LN:E69988] [AC:E69988] [PN:conserved hypothetical protein ytbJ] [GN:ytbJ] [CL:Mycoplasma genitalium hypothetical protein MG372] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185831:g2635442] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytbJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to hypothetical proteins] [SP:O34595] [LE:27183] [RE:28259] [DI:complement] >gp:[GI:g2293230] [LN:AF008220] [AC:AF008220] [PN:YtbJ] [GN:ytbJ] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to hypothetical protein MG372 from M.] [LE:152168] [RE:153244] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23489090_c2_835 2203 5975 1038 345 1033 2.5e-104 Description sp:[LN:KGPF_BACSU] [AC:O34529] [GN:PFKA:PFK] [OR:BACILLUS SUBTILIS] [EC:2.7.1.11] [DE:(PHOSPHOHEXOKINASE)] [SP:O34529] [DB:swissprot] >pir:[LN:A69675] [AC:A69675] [PN:6-phosphofructokinase pfk] [GN:pfk] [CL:6-phosphofructokinase:6-phosphofructokinase 1 homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184168:g2635384] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:6-phosphofructokinase] [GN:pfk] [FN:glycolysis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.11] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O34529] [LE:190531] [RE:191490] [DI:complement] >gp:[GI:g2293264] [LN:AF008220] [AC:AF008220] [PN:G-phosphofructokinase] [GN:pfk] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:191577] [RE:192536] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23555302_f2_233 2204 5976 387 128 91 0.00083 Description gp:[GI:e1363147:g4127385] [LN:APR011678] [AC:AJ011678] [PN:immunodominant protein] [OR:Apple proliferation phytoplasma] [DB:genpept-bct1] [DE:Apple proliferation phytoplasma immunodominant protein gene, strainAT.] [LE:885] [RE:1382] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23601713_c3_894 2205 5977 1194 397 1108 2.9e-112 Description sp:[LN:GCH2_BACAM] [AC:P51695] [GN:RIBA] [OR:BACILLUS AMYLOLIQUEFACIENS] [EC:3.5.4.25] [DE:PHOSPHATE SYNTHASE (DHBP SYNTHASE)] [SP:P51695] [DB:swissprot] >gp:[GI:e223994:g1212775] [LN:BARIBGENS] [AC:X95955] [PN:3,4-dihydroxy-2-butanone 4-phosphate synthase] [GN:ribA] [OR:Bacillus amyloliquefaciens] [DB:genpept-bct1] [DE:B. amyloliquefaciens ribB, ribG, ribA, ribH & ribT genes.] [NT:GTP cyclohydrolase II] [SP:P51695] [LE:2411] [RE:3607] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23603375_f2_219 2206 5978 417 138 139 1.4e-09 Description sp:[LN:Y577_METJA] [AC:Q57997] [GN:MJ0577] [OR:METHANOCOCCUS JANNASCHII] [DE:PROTEIN MJ0577] [SP:Q57997] [DB:swissprot] >pir:[LN:A64372] [AC:A64372] [PN:hypothetical protein homolog MJ0577] [CL:Escherichia coli ybdQ protein] [OR:Methanococcus jannaschii] [DB:pir2] [MP:FOR512975-513463] >gp:[GI:g1591284] [LN:U67506] [AC:U67506:L77117] [PN:conserved hypothetical protein] [GN:MJ0577] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 48 of 150 of the complete genome.] [NT:similar to SP:P42297 PID:603780 PID:849027] [LE:8204] [RE:8692] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2362587_f2_321 2207 5979 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23651567_c3_961 2208 5980 888 295 387 5.2e-41 Description gp:[GI:d1025814:g2897751] [LN:AB008520] [AC:AB008520] [GN:mutM] [OR:Thermus thermophilus] [SR:Thermus thermophilus (strain:HB8) DNA] [DB:genpept-bct1] [DE:Thermus thermophilus MutM gene, complete cds.] [LE:297] [RE:1100] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23694052_f2_359 2209 5981 603 200 82 0.0040 Description pir:[LN:E69818] [AC:E69818] [PN:hypothetical protein yhaK] [GN:yhaK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182998:g2633332] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhaK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [LE:72018] [RE:72272] [DI:complement] >gp:[GI:e324957:g2226123] [LN:BSY14077] [AC:Y14077] [PN:Hypothetical protein] [GN:yhaK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subitlis 10.6 Kb chromosomal DNA:glyB-prsA region.] [LE:8641] [RE:8895] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23710885_f2_167 2210 5982 147 48 76 0.027 Description pir:[LN:S72289] [AC:S72289] [PN:ribosomal protein L2] [GN:rp12] [OR:plastid Plasmodium falciparum] [DB:pir2] >gp:[GI:e220178:g1171595] [LN:PFCOMPIRB] [AC:X95276] [GN:rp12] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:P. falciparum complete gene map of plastid-like DNA (IR-B).] [LE:2799] [RE:3536] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2380342_c2_741 2211 5983 636 211 463 6.4e-44 Description pir:[LN:F69824] [AC:F69824] [PN:two-component response regulator [YhcY] homolog yhcZ] [GN:yhcZ] [CL:regulatory protein comA:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182922:g2633256] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcZ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to two-component response regulator [YhcY]] [LE:206441] [RE:207085] [DI:direct] >gp:[GI:e1182934:g2633268] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhcZ] [FN:unknown] [OR:Bacillus subtilis] DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to two-component response regulator [YhcY] [LE:9761] [RE:10405] [DI:direct] >gp:[GI:e324945:g2226141] [LN:BSY14079] [AC:Y14079] [PN:hypothetical protein] [GN:yhcZ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees:glpPFKD operon and downstream.] [NT:similarity to the transcriptional regulator degU] [LE:9409] [RE:10053] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2383253_c1_635 2212 5984 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_23984787_c3_924 2213 5985 1011 336 1404 1.2e-143 Description sp:[LN:CCPA_STAXY] [AC:Q56194] [GN:CCPA] [OR:STAPHYLOCOCCUS XYLOSUS] [DE:PROBABLE CATABOLITE CONTROL PROTEIN A] [SP:Q56194] [DB:swissprot] >gp:[GI:e220318:g1177685] [LN:SXCCPA] [AC:X95439] [GN:ccpA] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S. xylosus aroA, ccpA, acuC and acuA genes.] [SP:Q56194] [LE:1305] [RE:2294] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24017890_c2_843 2214 5986 1428 476 1242 1.8e-126 Description sp:[LN:LYSP_ECOLI] [AC:P25737] [GN:LYSP:CADR] [OR:ESCHERICHIA COLI] [DE:LYSINE-SPECIFIC PERMEASE] [SP:P25737] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24020250_c1_654 2215 5987 882 293 551 6.5e-52 Description gp:[GI:e1295630:g3184134] [LN:SSAASPROT] [AC:AJ000007] [PN:AAS surface protein] [GN:aas] [OR:Staphylococcus saprophyticus] [DB:genpept-bct1] [DE:Staphylococcus saprophyticus aas gene.] [LE:203] [RE:4594] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24025463_c1_620 2216 5988 2952 983 1357 1.2e-138 Description gp:[GI:g710421] [LN:SAU21636] [AC:U21636] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus cmp-binding-factor 1 (cbf1) and ORF X genes, complete cds.] [NT:ORF X] [LE:52] [RE:1158] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24226543_c1_704 2217 5989 783 260 365 1.6e-33 Description pir:[LN:E69827] [AC:E69827] [PN:glycerophosphodiester phosphodiesterase homolog yhdW] [GN:yhdW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182963:g2633297] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to glycerophosphodiester phosphodiesterase] [LE:37668] [RE:38399] [DI:complement] >gp:[GI:e1191883:g2226218] [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdW] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees: spoVR to sspB.] [NT:Similarity to glycerol diester phosphodiesterase] [LE:24316] [RE:25047] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2426312_f1_103 2218 5990 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24272568_c2_782 2219 5991 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2428950_c3_844 2220 5992 444 147 227 6.6e-19 Description gp:[GI:g1022725] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF2] [LE:394] [RE:1083] [DI:complement] >gp:[GI:g2951621 [LN:STAMECRA] [AC:L14017] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) gene and unknown ORF, complete cds.] [NT:unknown ORF1; putative] [LE:1492] [RE:2181] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24296925_f3_534 2221 5993 552 183 127 6.2e-08 Description gp:[GI:e184374:g2104803] [LN:CBDNAPTCG] [AC:X87972] [GN:P-21] [OR:Clostridium botulinum] [DB:genpept-bct1] [DE:C. botulinum progenitor toxin complex genes.] [LE:2337] [RE:2882] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24307677_c2_772 2222 5994 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24334563_c2_789 2223 5995 453 150 109 1.5e-05 Description gp:[GI:e1492342:g5262792] [LN:ATT13K14] [AC:AL080282] [PN:putative protein] [GN:T13K14.180] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept] [DE:Arabidopsis thaliana DNA chromosome 4, BAC clone T13K14 (ESSAproject).] [NT:similarity to desiccation-related protein,] [LE:67362:67832] [RE:67502:68491] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24337750_c3_913 2224 5996 852 283 1238 4.8e-126 Description sp:[LN:DAAA_STAHA] [AC:P54694] [GN:DAT] [OR:STAPHYLOCOCCUS HAEMOLYTICUS] [EC:2.6.1.21] [DE:TRANSAMINASE)] [SP:P54694] [DB:swissprot] >gp:[GI:g517475] [LN:SHU12238] [AC:U12238] [PN:D-amino acid transaminase] [GN:dat] [OR:Staphylococcus haemolyticus] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus Y176 D-amino acid transaminase (dat) gene, complete cds.] [LE:216] [RE:1064] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24407577_c1_724 2225 5997 738 245 833 4.0e-83 Description sp:[LN:PHOP_BACSU] [AC:P13792] [GN:PHOP] [OR:BACILLUS SUBTILIS] [DE:PHOP] [SP:P13792] [DB:swissprot] >gp:[GI:g40056] [LN:BSPHOPDNA] [AC:X67676] [GN:phoP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis phoP gene.] [SP:P13792] [LE:199] [RE:921] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24407765_c1_710 2226 5998 795 264 413 1.3e-38 Description sp:[LN:YCB9_PSEDE] [AC:P29942] [OR:PSEUDOMONAS DENITRIFICANS] [DE:HYPOTHETICAL 27.4 KD PROTEIN IN COBO 3′ REGION (ORF9)] [SP:P29942] [DB:swissprot] >pir:[LN:I38164] [AC:I38164] [PN:hypothetical protein 9] [OR:Pseudomonas sp.] [DB:pir2] >gp:[GI:g551929] [LN:PSECOBGEN] [AC:M62866] [OR:Pseudomonas denitrificans] [SR:Pseudomonas denitrificans (strain SC510) DNA] [DB:genpept-bct1] [DE:P. denitrificans cobN, cobO, cobP, cobQ, cobW, and ORF6-9 genes, complete cds.] [NT:ORF9] [LE:12364] [RE:13149] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24409803_c1_633 2227 5999 123 40 81 0.019 Description pir:[LN:S75730] [AC:S75730:S50064] [PN:8-amino-7-oxononanoate synthase, :7-keto-8-aminopelargonic acid synthetase:protein slr0917:7-keto-8-aminopelargonic acid synthetase:protein slr0917] [GN:bioF] [CL:5-aminolevulinate synthase] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [EC:2.3.1.47] [DB:pir2] >gp:[GI:d1011116:g1673311] [LN:SYCSLLE] [AC:D64003:AB001339] [PN:7-keto-8-aminopelargonic acid synthetase] [GN:bioF] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 22/27, 2755703-2868766.] [NT:ORF_ID:slr0917] [LE:35986] [RE:37299] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24417252_c3_902 2228 6000 1248 415 1038 7.5e-105 Description pir:[LN:F70001] [AC:F70001] [PN:multidrug resistance protein homolog yttB] [GN:yttB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185908:g2635519] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:yttB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to multidrug resistance protein] [LE:108543] [RE:109736] [DI:complement] >gp:[GI:g2293179] [LN:AF008220] [AC:AF008220] [PN:YttB] [GN:yttB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to tetracycline resistance protein from] [LE:70691] [RE:71884] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24428760_f3_509 2229 6001 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24475377_f3_537 2230 6002 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24490702_c1_616 2231 6003 405 134 74 0.011 Description sp:[LN:Y70A_METJA] [AC:P81311] [GN:MJ0703.1] [OR:METHANOCOCCUS JANNASCRII] [DE:HYPOTHETICAL PROTEIN MJ0703.1] [SP:P81311] [DB:swissprot] >gp:[GI:g2826311] [LN:U67517] [AC:U67517:L77117] [PN:M. jannaschii predicted coding region MJ0703.1] [GN:MJ0703.1] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 59 of 150 of the complete genome.] [NT:Brute Force ORF; identified by GeneMark; putative] [LE:94] [RE:402] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24492130_f1_70 2232 6004 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24508552_c3_971 2233 6005 1953 650 2471 1.1e-256 Description sp:[LN:SYT1_BACSU] [AC:P18255:P06570] [GN:THRS:THRSV] [OR:BACILLUS SUBTILIS] [EC:6.1.1.3] [DE:(THRRS)] [SP:P18255:P06570] [DB:swissprot] >pir:[LN:YSBST1] [AC:B37770:E24720:B69723] [PN:threonine--tRNA ligase,, major (thrS) :threonyl-tRNA synthetase] [GN:thrS:thrSv] [CL:threonine-tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.3] [DB:pir1] [MP:250 (degrees)] >gp:[GI:g143766] [LN:BACTRNASB] [AC:M36594] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) vegetative form DNA] [DB:genpept-bct1] [DE:B. subtilis threonyl-tRNA synthetase (thrSv) gene, complete cds.] [NT:(thrSv) (EC 6.1.1.3)] [LE:365] [RE:2296] [DI:direct] >gp:[GI:e1184144:g2635360] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:threonyl-tRNA synthetase] [GN:thrS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.3] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P18255] [LE:163202] [RE:165133] [DI:complement] >gp:[GI:e1165290:g1769999] [LN:BSZ75208] [AC:Z75208] [PN:threonyl-tRNA-synthetase] [GN:thrS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.3] [DE:B. subtilis genomic sequence 89009bp.] [NT:thrs (111–180); Major threonyl-tRNA synthetase] [SP:P18255] [LE:4774] [RE:6705] [DI:direct] >gp:[GI:g2293284] [LN:AF008220] [AC:AF008220] [PN:threonine tRNA synthetase] [GN:thrS] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:217934] [RE:219865] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24609676_c2_773 2234 6006 471 156 72 0.030 Description sp:[LN:NULM_DASNO] [AC:021333] [GN:MTND4L:ND4L:NADH4L] [OR:DASYPUS NOVEMCINCTUS] [SR:,NINE-BANDED ARMADILLO] [EC:1.6.5.3] [DE:NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4L,] [SP:O21333] [DB:swissprot] >gp:[GI:e311022:g2252509] [LN:MTDNCOMGN] [AC:Y11832] [GN:NADH4L] [OR:Mitochondrion Dasypus novemcinctus] [SR:nine-banded armadillo] [DB:genpept-mam] [DE:D. novemcinctus complete mitochondrial genome.] [SP:O21333] [LE:9903] [RE:10199] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24662915_c3_960 2235 6007 2718 905 2572 2.1e-267 Description sp:[LN:DPO1_BACSU] [AC:034996] [GN:POLA] [OR:BACILLUS SUBTILIS] [EC:2.7.7.7] [DE:DNA POLYMERASE I, (POL I)] [SP:O34996] [DB:swissprot] >pir:[LN:E69680] [AC:E69680] [PN:DNA polymerase I polA] [GN:polA] [CL:DNA-directed DNA polymerase I] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184158:g2635374] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:DNA polymerase I] [GN:polA] [FN:replication and DNA repair] [OR:Bacillus subtilis], [DB:genpept-bct1] [EC:2.7.7.7] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O34996] [LE:177125] [RE:17976711 [DI:complement] >gp:[GI:g2293272] [LN:AF008220] [AC:AF008220] [PN:DNA-polymerase I] [GN:polA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:203300] [RE:205942] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24692338_c3_895 2236 6008 474 157 540 4.5e-52 Description sp:[LN:RISB_BACAM] [AC:Q44681] [GN:RIBH] [OR:BACILLUS AMYLOLIQUEFACIENS] [EC:2.5.1.9] [DE:(LUMAZINE SYNTHASE) (RIBOFLAVIN SYNTHASE BETA CHAIN)] [SP:Q44681] [DB:swissprot] >gp:[GI:e223995:g1212776] [:LN:BARIBGENS] [AC:X95955] [PN:lumazine synthase (b-subunit)] [GN:ribH] [OR:Bacillus amyloliquefaciens] [DB:genpept-bct1] [DE:B. amyloliquefaciens ribB, ribG, nbA, ribH & ribT genes.] [SP:Q44681] [LE:3639] [RE:4103] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24720291_f2_322 2237 6009 498 165 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24726077_c3_965 2238 6010 1026 341 1088 3.8e-110 Description sp:[LN:G3P2_BACSU] [AC:O34425] [GN:GAPB] [OR:BACILLUS SUBTILIS] [EC:1.2.1.12] [DE:GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 2, (GAPDH)] [SP:O34425] [DB:swissprot] >pir:[LN:G69628] [AC:G69628] [PN:glyceraldehyde-3-phosphate dehydrogenase, gapB] [GN:gapB] [CL:glyceraldehyde-3-phosphate dehydrogenase] [OR:Bacillus subtilis] [EC:1.2.1.12] [DB:pir2] >gp:[GI:e1184151:g2635367] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:glyceraldehyde-3-phosphate dehydrogenase] [GN:gapB] [FN:glycolysis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.2.1.12] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O34425] [LE:170976] [RE:171998] [DI:complement] >gp:[GI:g2293277] [LN:AF008220] [AC:AF008220] [PN:glyceraldehyde-3-P-dehydrogenase] [GN:gapB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:211069] [RE:212091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24740701_c3_903 2239 6011 2508 835 3293 0.0 Description sp:[LN:SYL_BACSU] [AC:P36430:O34465] [GN:LEUS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.4] [DE:LEUCYL-TRNA SYNTHETASE, (LEUCINE--TRNA LIGASE) (LEURS)] [SP:P36430:O34465] [:DB:swissprot] >pir:[LN:D69650] [AC:D69650:A41882] [PN:leucine--tRNA ligase, :leucyl-tRNA synthetase] [GN:leuS] [CL:leucine--tRNA ligase] [OR:Bacillus subtilis] (EC:6.1.1.4] [DB:pir2] >gp:[GI:e1185905:g2635516] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:leucyl-tRNA synthetase] [GN:leuS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.4] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [SP:P36430] [LE:103940] [RE:106354] [DI:complement] >gp:[GI:g2293181] [LN:AF008220] [AC:AF008220] [PN:leucine tRNA synthetase] [GN:leuS] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:74073] [RE:76487] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24744077_c2_739 2240 6012 183 60 74 0.011 Description pir:[LN:B60608] [AC:B60608] [PN:myosin heavy chain] [CL:myosin heavy chain:myosin motor domain homology] [OR:Schistosoma mansoni] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24797177_c1_689 2241 6013 3534 1177 1450 1.7e-148 Description pir:[LN:C69999] [AC:C69999] [PN:DNA translocase stage III sporulation prot homolog ytpT] [GN:ytpT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185853:g2635464] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytpT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to DNA translocase stage III sporulation] [LE:51038] [RE:53146] [DI:complement] >gp:[GI:g2293215] [LN:AF008220] [AC:AF008220] [PN:YtpT] [GN:ytpT] [OR:Bacillus subtilisi] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:strong similarity to FtsK of E. coli and SpoIIIE of] [LE:127280] [RE:129388] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_24853437_c1_661 2242 6014 831 276 423 1.1e-39 Description pir:[LN:D69998] [AC:D69998] [PN:lysophospholipase homolog ytpA] [GN:ytpA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185924:g2635535] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytpA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to lysophospholipase] [LE:123973] [RE:124752] [DI:complement] >gp:[GI:g2293167] [LN:AF008220] [AC:AF008220] [PN:probable lysophospholipase] [GN:ytpA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:55675] (RE:56454] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2538252_c2_752 2243 6015 981 326 988 1.5e-99 Description sp:[LN:HEMZ_BACSU] [AC:P32396] [GN:HEMH:HEMF] [OR:BACILLUS SUBTILIS] [EC:4.99.1.1] [DE:SYNTHETASE)] [SP:P32396] [DB:swissprot]>pir:[LN:C47045] [AC:C47045:H69639] [PN:ferrochelatase, hemH] [GN:hemH] [OR:Bacillus subtilis] [EC:4.99.1.1] [DB:pir2] >gp:[GI:g143044] [LN:BACHEMEHY] [AC:M97208] [PN:ferrochelatase] [GN:hemH] [FN:iron is inserted into protoporphyrin IX giving] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [EC:4.99.1.1] [DE:Bacillus subtilis penicillin binding protein 1A (ponA) gene;uroporphyrinogen decarboxylase (hemE) gene; ferrochelatase (hemH) gene complete cds, (hemY) gene, complete cds; ORFA, complete cds; ORFB 5′ end.] [LE:3038] [RE:3970] [DI:direct] >gp:[GI:e1183015:g2633349] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:ferrochelatase] [GN:hemH] [FN:incorporation of iron into protoporphyrin IX] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.99.1.1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name:hemF] [SP:P32396] [LE:87223] [RE:88155] [DI:direct] >gp:[GI:e1191886:g2226231] [LN:BSY14083] [AC:Y14083] [PN:Ferrochelatase (EC 4.99.1.1); incorporation of] [GN:hemH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 76–78 degrees:between glyB-aprE.] [NT:see Swiss Prot P32396; HEMZ_BACSU.] [SP:P32396] [LE:7082] [RE:8014] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_25398425_c2_824 2244 6016 1167 388 731 2.6e-72 Description pir:[LN:F69666] [AC:F69666 ] [PN:NifS protein homolog nifZ] [GN:nifZ] [CL:nitrogen fixation protein nifS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185832:g2635443] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:NifS protein homolog] [GN:nifZ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:28263] [RE:29408] [DI:complement] >gp:[GI:g2293229] [LN:AF008220] [AC:AF008220] [PN:NifS2] [GN:nifS2] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to R. sphaeroides nitrogenase stabilizer] [LE:151019] [RE:152164] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_25476375_c2_813 2245 6017 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2548537_c1_703 2246 6018 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_25586632_c2_759 2247 6019 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_25665878_c1_683 2248 6020 1665 554 1014 2.6e-102 Description pir:[LN:G69992] [AC:G69992] [PN:spore cortex protein homolog ytgP] [GN:ytgP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185878:g2635489] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytgP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to spore cortex protein] [LE:74841] [RE:76475] [DI:complement] >gp:[GI:g2293198] [LN:AF008220] [AC:AF008220] [PN:YtgP] LGN:ytgP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to SpoVB protein from B. subtilis] [LE:103951] [RE:105585] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_25667217_c3_962 2249 6021 627 208 405 9.0e-38 Description sp:[LN:YTAG_BACSU] [AC:034932] [GN:YTAG] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 22.0 KD PROTEIN IN GAPB-MUTM INTERGENIC REGION] [SP:O34932] [DB:swissprot] >pir:[LN:A69988] [AC:A69988] [PN:conserved hypothetical protein ytaG] [GN:ytaG] [CL:conserved hypothetical protein YDR19Gc] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184155:g2635371] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ytaG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to hypothetical proteins] [SP:O34932] [LE:174866] [RE:175459] [DI:complement] >gp:[GI:g2293275] [LN:AF008220] [AC:AF008220] [PN:YtaG] [GN:ytaG] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to hypothetical protein HI0890 from H.] [LE:207608] [RE:208201] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_25972087_c3_846 2250 6022 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_26175952_f3_532 2251 6023 258 85 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_26181551_c2_834 2252 6024 948 315 1016 1.6e-102 Description sp:[LN:ACCA_BACSU] [AC:O34847] [GN:ACCA] [OR:BACILLUS SUBTILIS] [EC:6.4.1.2] [DE:(EC 6.4.1.2)] [SP:O34847] [DB:swissprot] >pir:[LN:G69580] [AC:G69580] [PN:acetyl-CoA carboxylase,, carboxyltransferase alpha chain] [GN:accA] [CL:acetyl-CoA carboxylase, carboxyltransferase alpha chain] [OR:Bacillus subtilis] [EC:6.4.1.2] [DB:pir2] >gp:[GI:e1184169:g2635385] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:acetyl CoA carboxylase (alpha subunit)] [GN:accA] [FN:long-chain fatty acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:O34847] [LE:191674] [RE:192651] [DI:complement] >gp:[GI:g2293263] [LN:AF008220] [AC:AF008220] [PN:acetyl-CoA carboxylase subunit] [GN:accA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:190416] [RE:191393] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_26188891_f1_29 2253 6025 210 69 75 0.012 Description pir:[LN:S58751] [AC:S58751] [PN:NADH dehydrogenase (ubiquinone), chain 3] [CL:NADH dehydrogenase (ubiquinone) chain 3] [OR:mitochondrion Hansenula wingei] [EC:1.6.5.3] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_26259686_f3_450 2254 6026 1242 413 801 9.8e-80 Description pir:[LN:A69643] [AC:A69643] [PN:serine proteinase Do, heat-shock protein htrA] [GN:htrA ] [CL:proteinase hhoB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e118l491:g2632011] [LN:BSAJ2571] [AC:A]002571] [PN:YkdA] [GN:ykdA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [NT:putative serine protease, heat-shock inducible;] [LE:10063] [RE:11412] [DI:complement] >gp:[GI:e1183310:g2633644] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:serine protease Do (heat-shock protein)] [GN:htrA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:alternate gene name:ykdA] [LE:163012] [RE:1643611 [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_26567062_c1_642 2255 6027 792 263 428 3.3e-40 Description pir:[LN:A69996] [AC:A69996] [PN:hypothetical protein ytmA] [GN:ytmA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185931:g2635542] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytmA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:132757] [RE:133530] [DI:complement] >gp:[GI:g2293162] [LN:AF008220] [AC:AF008220] [PN:putative peptidase] [GN:ytmA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:46897] [RE:47670] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_26596062_f3_484 2256 6028 1284 427 1198 8.3e-122 Description gp:[GI:g2293312] [LN:AF008220] [AC:AF008220] [PN:YtfP] [GN:ytfP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to hypothetical protein f400 from E.] [LE:102487] [RE:103704] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2741536_c2_805 2257 6029 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2757633_c2_765 2258 6030 1494 497 1275 1.9e-164 Description sp:[LN:MENE_STAAU] [AC:Q53634] [GN:MENE] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.2.1.26] [DE:(O-SUCCINYLBENZOATE-COA SYNTHASE)] [SP:Q53634] [DB:swissprot] [>gp:[GI:g1255259] [LN:SAU51132] [AC:U51132] [PN:o-succinylbenzoic acid (OSB) CoA ligase] [GN:mene] [FN:converts OSB to OSB-CoA in menaquinone] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus o-succinylbenzoic acid CoA ligase (mene), and o-succinylbenzoic acid synthetase (menc) genes, complete cds.] [LE:491] [RE:1969] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2869676_f2_338 2259 6031 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2923202_c1_699 2260 6032 1473 490 1202 3.1e-122 Description gp:[GI:g1732197] [LN:VFU65014] [AC:U65014] [PN:PTS permease for N-acetylglucosamine and] [GN:nagE] [OR:Vibrio furnissii] [DB:genpept-bct2] [DE:Vibrio furnissii PTS permease for N-acetylglucosamine and glucose (nagE) gene, complete cds.] [NT:PTS enzyme IINag] [LE:115] [RE:1605] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_29562552_f3_555 2261 6033 276 91 281 1.2e-24 Description pir:[LN:H69993] [AC:H69993] [PN:hypothetical protein ytjA] [GN:ytjA] [CL:conserved hypothetical protein HI1000] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185941:g2635552] [LN:BSUB001G] [AC:Z99119:AL009126] [GN:ytjA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:139407] [RE:139634] [DI:direct] >gp:[GI:g2293294] [LN:AF008220] [AC:AF008220] [PN:YtjA] [GN:ytjA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to hypothetical 9.3 kD protein from P.] [LE:40793] [RE:41020] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_30079651_f1_66 2262 6034 1620 539 1135 4.0e-115 Description sp:[LN:SERA_BACSU] [AC:P35136:032011] [GN:SERA] [OR:BACILLUS SUBTILIS] [EC:1.1.1.95] [DE:D-3-PHOSPHOGLYCERATE DEHYDROGENASE, (PGDH)] [SP:P35136:032011] [DB:swissprot] >pir:[LN:C69705] [AC:C69705:S45534] [PN:phosphoglycerate dehydrogenase, serA] [GN:serA] [CL:Bacillus phosphoglycerate dehydrogenase] [OR:Bacillus subtilis] [EC:1.1.1.95] [DB:pir2] >gp:[GI:e1185576:g2634742] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:phosphoglycerate dehydrogenase] [GN:serA] [FN:serine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.95] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P35136] [LE:15060] [RE:16637] [DI:direct] >gp:[GI:g1146196] [LN:BACSERA] [AC:L47648] [PN:phosphoglycerate dehydrogenase] [GN:serA] [FN:serine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphoglycerate dehydrogenase (serA), ypaA,ferredoxin (fer), ypbB, recS, ypbD, ypbE, ypbF, ypbG, ypbH, glutamate dehydrogenase (ypcA), ypdA, ypdB, ypdC, spore cortexlytic enzyme (sleB), ypeB, ypfA, ypfB, cytidine monophosphatekinase (cmk), ypfD, ypgA, yphA, yphB, yphC, NAD+ dependentglycerol-3-phosphate dehydrogenase (glyc), yphE and yphF genes, complete cds.] [LE:40] [RE:1617] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_30084402_f3_446 2263 6035 1188 395 716 1.0e-70 Description sp:[LN:DHSS_SYNP1] [AC:P14776] [OR:SYNECHOCOCCUS SP] [SR:PCC 6716,] [EC:1.12.—.—] [DE:SUBUNIT)] [SP:P14776] [DB:swissprot] [>pir:[LN:HQYCSS] [AC:S06919] [PN:soluble hydrogenase, small chain] [CL:serine--pyruvate aminotransferase] [OR:Synechococcus sp.] [EC:1.12.—.—] [DB:pir1] >gp:[GI:g480541 [LN:SYNSOLHY] [AC:X16658] [OR:Synechococcus sp.] [SR:Synechococcus sp] [DB:genpept-bct1] [DE:Synechococcus DNA for the small subunit of soluble hydrogenase.] [NT:small subunit of soluble hydrogenase (AA 1-384)] [SP:P14776] [LE:226] [RE:1380] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_30114637_c3_847 2264 6036 1167 388 1177 1.4e-119 Description pir:[LN:E69820] [AC:E69820 ] [PN:conserved hypothetical protein yhbA] [GN:yhbA ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182880:g2633214] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhbA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:alternate gene name:ygaP; similar to hypothetical] [LE:164477] [RE:165784] [DI:direct] >gp:[GI:e308636:g1903044] [LN:BSZ93102] [AC:Z93102] [PN:hypothetical 48.5 kd protein] [GN:ygaP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis yga[L,M,N,O,P,Q,R,S,T], yzdB and yze[A,C} genes.] [LE:6803] [RE:8110] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_30274187_f3_522 2265 6037 969 322 1317 2.0e-134 Description pir:[LN:D69999] [AC:D69999 ] [PN:conserved hypothetical protein ytqA] [GN:ytqA ] [CL:Methanococcus jannaschii conserved hypothetical protein MJ0486] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185921:g2635532] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytqA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to hypothetical proteins] [LE:121310] [RE:122278] [DI:direct] >gp:[GI:g2293302] [LN:AF008220] [AC:AF008220] [PN:YtqA] [GN:ytqA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-driaB genomic region.] [NT:similarity to biotine synthase from B. sphaericus] [LE:58149] [RE:59117] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_30508255_c3_912 2266 6038 1416 471 1011 5.5e-102 Description pir:[LN:S43914] [AC:S43914] [PN:hypothetical protein 1] [CL:peptidase V] [OR:Bacillus stearothermophilus] [DB:pir2] >gp:[GI:g436965] [LN:BACMALA] [AC:L13418] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (library:ATCC 7953) DNA] [DB:genpept-bct1] [DE:Bacillus stearothermophilus maltose permease (malA) gene, complete cds.] [LE:24] [RE:1376] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_31256568_c2_817 2267 6039 201 66 114 6.2e-07 Description pir:[LN:F71011] [AC:F71011] [PN:hypothetical protein PH1388] [GN:PH1388] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031437:g32578l1] [LN APO 00006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:119aa long hypothetical protein] [GN:PH1388] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001-1485000 nt. position (6/7).] [LE:86760] [RE:87119] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_3140917_c3_954 2268 6040 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_31539156_c3_874 2269 6041 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_3158502_c2_792 2270 6042 225 74 122 2.7e-07 Description pir:[LN:A69997] [AC:A69997] [PN:hypothetical protein ytmP] [GN:ytmP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185865:g2635476] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytmP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:61986] [RE:62795] [DI:complement] >gp:[GI:g2293206] [LN:AF008220] AC:AF008220] [PN:YtmP] [GN:ytmP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:117631] [RE:118440] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33209677_c2_831> 2271 6043 972 323 764 8.2e-76 Description pir:[LN:F69999] [AC:F69999] [PN:conserved hypothetical protein ytqI] [GN:ytqI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184174:g2635390] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ytqI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795l31 to 3013540.] [NT:similar to hypothetical proteins] [LE:199851] [RE:200792] [DI:complement] >gp:[GI:g2293259] [LN:AF008220] [AC:AF008220] [PN:YtqI] [GN:ytqI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to MGPA protein from M. genitalium] [LE:182275] [RE:183216] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33287515_f1_122 2272 6044 330 109 89 0.0022 Description gp:[GI:g4091929] [LN:AF069752] [AC:AF069752] [PN:C5,6 desaturase] [GN:ERG3] [OR:Candida albicans] [DB:genpept-pln2] [DE:Candida albicans C5,6 desaturase (ERG3) gene, complete cds.] [LE:387] [RE:1547] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33292165_f1_155 2273 6045 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33317002_f1_114 2274 6046 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33360312_f1_74 2275 6047 420 139 295 1.6e-25 Description gp:[GI:e1284114:g2982646] [LN:SPAJ2293] [AC:AJ002293] [PN:penicillin-binding protein lb] [GN:pbp1b] [OR:Streptococcus pneumoniae] [DB:genpept-bct1] [DE:Streptococcus pneumoniae pbp1b gene, partial, beta-lactamresistant.] [LE:<1] [RE:>1600] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33647577_c2_740 2276 6048 1386 461 1586 6.4e-163 Description gp:[GI:e1249821:g2832825] [LN:BS43KBDNA] [AC:AJ223978] [PN:fumarase protein, CitG] [GN:citG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7kB DNA fragment from yvsA to yvqA.] [LE:37816] [RE:39204] [DI:direct] >gp:[GI:e1184383:g2635801] [LN:BSUB0017] [AC:Z99120:AL009126] [PN:fumarate hydratase] [GN:citG] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.2.1.2] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:191083] [RE:192471] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33650137_c2_794 2277 6049 207 68 177 1.3e-13 Description pir:[LN:A69999] [AC:A69999] [PN:phenylalanyl-tRNA synthetase (beta subunit) homolog ytpR] [GN:ytpR] [CL:Mycoplasma genitalium hypothetical protein MG449] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185855:g2635466] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytpR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to phenylalanyl-tRNA synthetase (beta] [LE:54055] RE:54660] [DI:complement] >gp:[GI:g2293213] [LN:AF008220] [AC:AF008220] [PN:YtpR] [GN:ytpR] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to phenylalanine tRNA ligase of E. coli] [LE:125766] [RE:126371] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_3365887_c2_791 2278 6050 630 209 501 6.0e-48 Description pir:[LN:A69997] [AC:A69997] [PN:hypothetical protein ytmP] [GN:ytmP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185865:g2635476] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytmP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:61986] [RE:62795] [DI:complement] >gp:[GI:g2293206] [LN:AF008220] [AC:AF008220] [PN:YtmP] [GN:ytmP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:117631] [RE:118440] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33792687_c1_629 2279 6051 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33831512_f2_373 2280 6052 234 77 82 0.0093 Description gp:[GI:e1346461:g3876981] [LN:CEF40D4] [AC:Z81536] [GN:F40D4.10] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F40D4, complete sequence.] [LE:20486:20882:21041:21585] [RE:20830:20997:21200:21746] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_33985077_c1_720 2281 6053 1230 409 1529 7.0e-157 Description pir:[LN:C70001] [AC:C70001] [PN:malate dehydrogenase homolog ytsJ] [GN:ytsJ] [CL:malate dehydrogenase (oxaloacetate-decarboxylating)] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184171:g2635387] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:ytsJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to malate dehydrogenase] [LE:193843] [RE:195075] [DI:complement] >gp:[GI:g2293261] [LN:AF008220] [AC:AF008220] [PN:YtsJ] [GN:ytsJ] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to malate dehydrogenase (NADP+) from] [LE:18799211 [RE:189224] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34177127_c1_721 2282 6054 1806 601 1853 3.3e-191 Description sp:[LN:KPYK_BACLI] [AC:P51181] [GN:PYK] [OR:BACILLUS LICHENIFORMIS] [EC:2.7.1.40] [DE:PYRUVATE KINASE, (PK)] [SP:P51181] [DB:swissprot] >pir:[LN:JC4220] [AC:JC4220] [PN:pyruvate kinase, :ATP:pyruvate 2-O-phosphotransferase] [CL:pyruvate kinase] [OR:Bacillus licheniformis] [EC:2.7.1.40] [DB:pir2] >gp:[GI:d1007299:g1041099] [LN:BACPYK2] [AC:D31955] [PN:Pyruvate Kinase] [OR:Bacillus licheniformis] [SR:Bacillus licheniformis DNA] [DB:genpept-bct1] [DE:Bacillus licheniformis gene for pyruvate kinase, complete cds.] [LE:132] [RE:1889] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34178128_c3_888 2283 6055 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34181551_c2_841 2284 6056 924 307 618 2.4e-60 Description Sp:[LN:DNAI_BACSU] [AC:P06567] [GN:DNAI] [OR:BACILLUS SUBTILIS] [DE:PRIMOSOMAL PROTEIN DNAI] [SP:P06567] [DB:swissprot] >pir:[LN:IQBS44] [AC:B24720:C26580:F69617] [PN:primosome component (helicase loader) dnaI:dnaA protein homolog, 44K:hypothetical protein Y (dnaB 3′ region)] [GN:dnaI] [CL:44K dnaA protein homolog] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g39881] [LN:BSDNAB] [AC:X04963] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis dnaB gene for initiation of chromosomal replication.] [NT:ORF 311 (AA 1-311)] [SP:P06567] [LE:1843] [RE:2778] [DI:direct] >gp:[GI:e1184147:g2635363] [LN:BSUB0015] [AC:Z99118:AL00912G] [PN:helicase loader] [GN:dnaI] [FN:DNA synthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:alternate gene name: ytxA, dnaY] [SP:P06567] [LE:167129] [RE:168064] [DI:complement] >gp:[GI:e1165286:g1769996] [LN:BSZ75208] [AC:Z75208] [PN:replication protein] [GN:dnaI] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE: B. subtilis genomic sequence 89009bp.] [NT:DNA synthesis; putative primosome component] [SP:P06567] [LE:1843] [RE:2778] [DI:direct] >gp:[GI:g2293281] [LN:AF008220] [AC:AF008220] [PN:DnaI] [GN:dnaI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:2150031 [RE:215938] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34199077_c3_883 2285 6057 1017 338 864 2.1e-86 Description gp:[GI:g1255260] [LN:SAU51132] [AC:U51132] [PN:o-succinylbenzoic acid (OSB) synthetase] [GN:menc] [FN:converts SHCHC to OSB in menaquinone] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus o-succinylbenzoic acid CoA ligase (mene), and o-succinylbenzoic acid synthetase (menc) genes, complete cds.] [LE:1974] [RE:2975] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34272752_c3_862 2286 6058 963 320 1413 1.4e-144 Description gp:[GI:g710422] [LN:SAU21636] [AC:U21636] [PN:cmp-binding-factor 1] [GN:cbf1] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus cmp-binding-factor 1 (cbf1) and ORF X genes,complete cds.] [LE:1155] [RE:2096] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34415925_c3_914 2287 6059 654 217 540 4.5e-52 Description pir:[LN:B69997] [AC:B69997] [PN:conserved hypothetical protein ytmQ] [GN:ytmQ] [CL:hypothetical protein H10340] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185863:g2635474] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytmQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to hypothetical proteins] [LE:60859] [RE:61500] [DI:complement] >gp:[GI:g2293207] [LN:AF008220] [AC:AF008220] [PN:YtmQ] [GN:ytmQ] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similar to hypothetical protein HI0340 from H.] [LE:118926] [RE:119567] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34429838_c3_884 2288 6060 483 160 261 1.6e-22 Description pir:[LN:E69994] [AC:E69994 ] [PN:hypothetical protein ytkD] [GN:ytkD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185936:g2635547] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytkD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:136293] [RE:136769] [DI:complement] >gp:[GI:g2293161] [LN:AF008220] [AC:AF008220] [PN:YtkD] [GN:ytkD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:43658] [RE:44134] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34610925_f3_445 2289 6061 462 153 274 6.9e-24 Description pir:[LN:F69883] [AC:F69883] [PN:conserved hypothetical protein ymaD] [GN:ymaD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:el183387:g2634112] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ymaD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [NT:similar to hypothetical proteins] [LE:82267] [RE:82719] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_34617017_c3_869 2290 6062 759 252 773 9.1e-77 Description sp:[LN:ECSA_BACSU] [AC:P55339] [GN:ECSA:PRST] [OR:BACILLUS SUBTILIS] [DE:ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN ECSA] [SP:P55339] [DB:swissprot] >pir:[LN:F69619] [AC:F69619] [PN:ABC transporter (ATP-binding protein) ecsA] [GN:ecsA] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e183449:g1177253] [LN:BSECSABCG] [AC:X87807] [PN:putative ATP-binding protein of ABC-type] [GN:ecsA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ecsA, ecsB, and ecsC genes.] [SP:P55339] [LE:248] [RE:991] [DI:direct] >gp:[GI:e1183006:g2633340] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:ABC transporter (ATP-binding protein)] [GN:ecsA] [FN:regulates both components of the protein] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name: prsT, ecs-26, yhaD] [SP:P55339] [LE:77413] [RE:78156] [DI:direct] >gp:[GI:e324952:g2226115] [LN:BSY14077] [AC:Y14077] [PN:Hypothetical protein] LGN:yhaD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subitlis 10.6 Kb chromosomal DNA:glyB-prsA region.] [NT:Identified as ecsA. Similar to many ATP binding ABC] [SP:P55339] [LE:2757] [RE:3500] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_35360932_c3_944 2291 6063 1278 425 1493 4.6e-153 Description sp:[LN:ACKA_BACSU] [AC:P37877] [GN:ACKA] [OR:BACILLUS SUBTILIS] [EC:2.7.2.1] [DE:ACETATE KINASE, (ACETOKINASE)] [SP:P37877] [DB:swissprot] >pir:[LN:B499351 [AC:B49935:C69581] [PN:acetate kinase, ackA] [GN:ackA] [CL:acetate kinase] [OR:Bacillus subtilis] [EC:2.7.2.1] [DB:pir2] >gp:[GI:e1185820:g2635431] [LN:BSUB0016] [AC:Z99119:AL009126] [PN:acetate kinase] [GN:ackA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.2.1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [SP:P37877][LE:16413] [RE:17600] [DI:complement] >gp:[GI:g2293240] [LN:AF008220] [AC:AF008220] [PN:acetate kinase] [GN:ackA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:162827] [RE:164014] [DI:directll >gp:[GI:g405134] [LN:BACACKA] [AC:L17320] [PN:acetate kinase] [GN:ackA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct2] [DE:Bacillus subtilis acetate kinase (ackA) gene, complete cds.] [LE:698] [RE:1885] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_36152191_c3_863 2292 6064 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_36541078_c1_647 2293 6065 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_3906642_c1_632 2294 6066 600 199 244 1.0e-20 Description pir:[LN:H69778] [AC:H69778] [PN:hypothetical protein ydeN] [GN:ydeN] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020114:g1881334] [LN:AB001488] [AC:AB001488] [GN:ydeN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:106671] RE:107243] [DI:complement] >gp:[GI:e1182492:g2632826] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydeN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [LE:170416] [RE:170988] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_3944015_c1_608 2295 6067 540 179 331 6.2e-30 Description pir:[LN:S68867] [AC:568867:554422] [PN:probable transport protein arpJ:ABC transporter arpJ] [OR:Listeria monocytogenes] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4073892_c1_631 2296 6068 1458 485 1083 1.3e-109 Description sp:[LN:PPOX_BACSU] [AC:P32397] [GN:HEMY:HEMG] [OR:BACILLUS SUBTILIS] [EC:1.3.3.4] [DE:PROTOPORPHYRINOGEN OXIDASE, (PPO)] [SP:P32397] [DB:swissprot] >pir:[LN:D47045] [AC:D47045:D69640] [PN:coproporphyrinogen III oxidase/protoporphyrinogen IX oxidase hemY] [GN:hemY] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143045] [LN:BACHEMEHY] [AC:M97208] [GN:hemY] [FN:involved in a late step of protoheme IX] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis penicillin binding protein 1A (ponA) gene; uroporphyrinogen decarboxylase (hemE) gene; ferrochelatase (hemH) gene complete cds, (hemY) gene, complete cds; ORFA, complete cds; ORFB 5′ end.] [LE:3985] [RE:5397] [DI:direct] >gp:[GI:e1183016:g2633350] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:protoporphyrinogen IX and coproporphyrinogen III] [GN:hemY] [FN:late steps of protoheme IX synthesis (porphyrin] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.3.3.4] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name:hemG] [SP:P32397] [LE:88170] [RE:89582] [DI:direct] >gp:[GI:e325009:g2226232] [LN:BSY14083] [AC:Y14083] [PN:Protoporphyrinogen IX oxidase] [GN:hemY] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 76–78 degrees: between glyB-aprE.] [NT:see Swiss Prot P32397; HEMG_BACSU.] [SP:P32397] [LE:8029] [RE:9441] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4110882_f3_473 2297 6069 351 116 90 0.00022 Description pir:[LN:D70004] [AC:D70004] [PN:hypothetical protein ytzB] [GN:ytzB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185860:g2635471] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytzB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:57791] [RE:58108] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4173427_c2_742 2298 6070 474 157 82 0.0020 Description pir:[LN:A64334] [AC:A64334] [PN:hypothetical protein MJ0272] [OR:Methanococcus jannaschii] [DB:pir2] [MP:FOR257413-257652] >gp:[GI:g1590997] [LN:U67482] [AC:U67482:L77117] [PN:repressor protein, putative (yorfE)] [GN:MJ0272] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 24 of 150 of the complete genome.] [NT:similar to GP:1536960 percent identity:40.32;] [LE:563311 [RE:5872] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4183428_c3_921 2299 6071 1329 442 1966 3.5e-203 Description sp:[LN:MURC_STAAU] [AC:O31211] [GN:MURC] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.3.2.8] [DE:ACETYLMURANOYL-L-ALANINE SYNTHETASE)] [SP:O31211] [DB:swissprot] >gp:[GI:g2642659] [LN:AF034076] [AC:AF034076] [PN:UDP-N-acetylmuramoyl-L-alanine synthetase] [GN:murC] [FN:cell wall biosynthesis] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus UDP-N-acetylmuramoyl-L-alanine synthetase (murC) gene, complete cds.] [NT:MurC; UDP-N-acetylmuramate-alanine ligase] [LE:1] [RE:1314] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4296950_c2_764 2300 6072 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4299175_c1_637 2301 6073 240 79 102 0.00012 Description pir:[LN:T00158] [AC:T00158] [PN:amidase,] [OR:Staphylococcus aureus phage phi PVL] [EC:3.5.—.—] [DB:pir3] >gp:[GI:d1032859:g3341932] [LN:AB009866] [AC:AB009866] [PN:amidase (peptidoglycan hydrolase)] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 25] [LE:20199] [RE:21653] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4345967_f2_357 2302 6074 441 146 368 7.5e-34 Description sp:[LN:HIT_BACSU] [AC:O07513] [GN:HIT] [OR:BACILLUS SUBTILIS] [DE:HIT PROTEIN] [SP:O07513] [DB:swissprot] >pir:[LN:A69642] [AC:A69642] [PN:cell-cycle regulation histidine triad (HIT) protein] [GN:hit] [CL:protein kinase C inhibitor:histidine triad homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183005:g2633339] [LN:BSUB000S] [AC:Z99109:AL009126] [PN:Hit-like protein] [GN:hit] [FN:cell-cycle regulation (inhibition of cell] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:alternate gene name:yhaE] [SP:O07513] [LE:76488] [RE:76925] [DI:complement] >gp:[GI:e325178:g2226116] [LN:BSY14077] [AC:Y14077] [PN:Hypothetical protein] [GN:yhaE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subitlis 10.6 Kb chromosomal DNA:glyB-prsA region.] [NT:Similarity to the Hit family of proteins] [SP:007513] [LE:3988] [RE:4425] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4453537_c3_937 2303 6075 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4459380_c1_712 2304 6076 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4502308_c2_812 2305 6077 636 211 502 4.7e-48 Description pir:[LN:E69826] [AC:E69826] [PN:1-acylglycerol-3-phosphate O-acyltransfera homolog yhdO] [GN:yhdO] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182955:g2633289] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdO] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to 1-acylglycerol-3-phosphate] [LE:31375] [RE:31974] [DI:direct] >gp:[GI:e325031:g22262101 [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdO] [OR:Bacillus subtilis] [DB:genpept-bct11 [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees: spoVR to sspB.] [NT:Similarity to a hypothetical protein from] [LE:18023] [RE:18622] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4511283_c3_859 2306 6078 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4568761_c1_630 2307 6079 1116 371 1257 4.7e-128 Description sp:[LN:DCUP_BACSU] [AC:P32395] [GN:HEME] [OR:BACILLUS SUBTILIS] [EC:4.1.1.37] [DE:UROPORPHYRINOGEN DECARBOXYLASE, (UPD)] [SP:P32395] [DB:swissprot] >pir:[LN:B47045] [AC:B47045:G69639] [PN:uroporphyrinogen decarboxylase, hemE:uroporphyrinogen III decarboxylase hemE] [GN:hemE] [CL:uroporphyrinogen decarboxylase] [OR:Bacillus subtilisil [EC:4.1.1.37] [DB:pir2] >gp:[GI:g143043] [LN:BACHEMEHY] [AC:M97208] [PN:uroporphyrinogen decarboxylase] [GN:hemE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [EC:4.1.1.37] [DE:Bacillus subtilis penicillin binding protein 1A (ponA) gene; uroporphyrinogen decarboxylase (hemE) gene; ferrochelatase (hemH) gene complete cds, (hemY) gene, complete cds; ORFA, complete cds; ORFB 5′ end.] [LE:1905] [RE:2966] [DI:direct] >gp:[GI:e1183014:g2633348] [LN:BSUB0006] [AC:Z99109:AL009126] [PN:uroporphyrinogen III decarboxylase] [GN:hemE] [FN:porphyrin biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.1.37] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [SP:P32395] [LE:86090] [RE:87151] [DI:direct] >gp:[GI:e325194:g2226230] [LN:BSY14083] [AC:Y14083] [PN:Uroporphyrinogen III decarboxylase] [GN:hemE] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.1.37] [DE:Bacillus subtilis chromosomal DNA, region 76–78 degrees: between glyB-aprE.] [NT:see Swiss Prot P32395; DCUP_BACSU.] [SP:P32395] [LE:5949] [RE:7010] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4579675_f3_569 2308 6080 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4693800_f2_225 2309 6081 570 189 191 4.3e-15 Description pir:[LN:A69220] [AC:A69220] [PN:conserved hypothetical protein MTH898] [GN:MTH898] [CL:Escherichia coli ybdQ protein] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2621993] [LN:AE000865] [AC:AE000865:AE000666] [PN:conserved protein] [GN:MTH898] [OR:Methanobacterium thermoautotrophicum] [DB genpept-bct1] [DE:Methanobacterium thermoautotrophicum from bases 808939 to 820180 (section 71 of 148) of the complete genome.] [NT:Function Code:14.01 - Unknown, Conserved protein;] CLE:6700] [RE:7149] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4697318_c3_919 2310 6082 867 288 671 5.8e-66 Description pir:[LN:H69998] [AC:H69998] [PN:hypothetical protein ytpQ] [GN:ytpQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185856:g2635467] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytpQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [LE:54676] [RE:55485] [DI:complement] >gp:[GI:g2293212] [LN:AF008220] [AC:AF008220] [PN:YtpQ] [GN:ytpQ] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:124941] [RE:125750] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_472538_c1_707 2311 6083 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4776702_c1_669 2312 6084 312 103 164 3.1e-12 Description sp:[LN:YRKF_BACSU] [AC:P54433] [GN:YRKF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 20.7 KD PROTEIN IN BLTR-SPOIIIC INTERGENIC REGION] [SP:P54433] [DB:swissprot] >pir:[LN:D69976] [AC:D69976] [PN:conserved hypothetical protein yrkF] [GN:yrkF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013040:g1303705] [LN:BACJH642] [AC:D84432:D82370] [PN:YrkF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642 (trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:6477] [RE:7034] [DI:direct] >gp:[GI:e1183882:g2635098] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrkF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to hypothetical proteins from B. subtilis] [SP:P54433] [LE:112396] [RE:112953] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4876300_c2_806 2313 6085 1695 564 1845 2.3e-190 Description sp:[LN:FTHS_STRMU] [AC:Q59925:Q59926] [GN:FHS] [OR:STREPTOCOCCUS MUTANS] [EC:6.3.4.3] [DE:SYNTHETASE) (FHS) (FTHFS)] [SP:Q59925:Q59926] [DB:swissprot] >gp:[GI:g1103865] [LN:SMU39612] [AC:U39612] [PN:formyl-tetrahydrofolate synthetase] [GN:fhs] [FN:enzyme involved in the formation of] [OR:Streptococcus mutans] [DB:genpept-bct1] [EC:6.3.4.3] [DE:Streptococcus mutans formyl-tetrahydrofolate synthetase (fhs) gene, complete cds.] [NT:formyl-tetrahydrofolate ligase; ATP-dependant] [LE:115] [RE:1785] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4876718_c1_617 2314 6086 1143 380 810 1.1e-80 Description pir:[LN:E69824] [AC:E69824] [PN:two-component sensor histidine kinase homolog yhcY] [GN:yhcY] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182921:g2633255] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to two-component sensor histidine kinase] [LE:205305] [RE:206444] [DI:direct] >gp:[GI:e1182933:g2633267] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhcY] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to two-component sensor histidine kinase] [LE:8625] [RE:9764] [DI:direct] >gp:[GI:e1191876:g2226140] [LN:BSY14079] [AC:Y14079] [PN:hypothetical protein] [GN:yhcY] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees: glpPFKDoperon and downstream.] [NT:similarity to the sensory transduction kinase degS] [LE:8273] [RE:9412] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4882963_f3_591 2315 6087 834 277 457 2.8e-43 Description sp:[LN:YHCT_BACSU] [AC:P54604] [GN:YHCT] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 33.7 KD PROTEIN IN CSPB-GLPP INTERGENIC REGION] [SP:P54604] [DB:swissprot] >pir:[LN:H69823] [AC:H69823] [PN:conserved hypothetical protein yhcT] [GN:yhcT] [CL:conserved hypothetical protein H10176] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e233879:g1239996] [LN:BS75DGREG] [AC:X96983] [PN:hypothetical protein] [GN:yhcT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 75 degrees:cspB upstream of glpPFKD operon).] [NT:Similarity to DRAP deaminase from Saccharomyces] [SP:P54604] [LE:16504] [RE:17412] [DI:complement] >gp:[GI:e1182910:g2633244] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to hypothetical proteins] [SP:P54604] [LE:192310] [RE:193218] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_4938877_c2_778 2316 6088 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5081252_f2_327 2317 6089 360 119 199 6.1e-16 Description pir:[LN:A70341] [AC:A70341] [PN:conserved hypothetical protein aq_449] [GN:aq_449] [CL:hypothetical protein MJ1523] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983116] [LN:AE000690] [AC:AE000690:AE000657] [PN:hypothetical protein] [GN:aq_449] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 22 of 109 of the complete genome.] [LE:10789] [RE:11163] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5132078_c3_845 2318 6090 729 242 752 1.5e-74 Description pir:[LN:H69334] [AC:H69334] [PN:glutamine transport protein glnQ] [GN:glnQ] [CL:inner membrane protein malK:ATP-binding cassette homology] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649950] [LN:AE001058] [AC:AE001058:AE000782] [PN:glutamine ABC transporter, ATP-binding protein] [GN:AF0680] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 49 of 172 of the complete genome.] [NT:similar to GB:M61017 SP:P27675 PID:142988 percent] [LE:10147] [RE:10875] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5135265_c3_967 2319 6091 504 167 438 2.9e-41 Description gp:[GI:g4982284] [LN:AE001810] [AC:AE001810:AE000512] [PN:conserved hypothetical protein] [GN:TM1707] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 122 of 136 of the complete genome.] [NT:similar to GB:M15183 PID:468267 PID:2293279] [LE:13832] [RE:14302] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5273425_c2_735 2320 6092 1053 350 473 5.6e-45 Description gp:[GI:g4981111] [LN:AE001734] [AC:AE001734:AE000512] [PN:amino acid ABC transporter, permease protein] [GN:TM0592] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 46 of 136 of the complete genome.] [NT:similar to GB:AE000782 percent identity:72.86;] [LE:3214] [RE:3864] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5355250_c1_696 2321 6093 1284 427 1343 3.6e-137 Description sp:[LN:SYY_BACST] [AC:P00952] [GN:TYRS] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:6.1.1.1] [DE:TYROSYL-TRNA SYNTHETASE, (TYROSINE--TRNA LIGASE] [TYRRS)] [SP:P00952] [DB:swissprot] >pir:[LN:SYBSYF] [AC:A01179:I40506] [PN:tyrosine--tRNA ligase, :tyrosyl-tRNA synthetase] [CL:tyrosine--tRNA ligase] [OR:Bacillus stearothermophilus] [EC:6.1.1.1] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_551907_f3_559 2322 6094 708 235 183 3.0e-14 Description gp:[GI:g2897104] [LN:AF020798] [AC:AF020798] [PN:putative host cell surface-exposed lipoprotein] [OR:Streptococcus thermophilus bacteriophage TP-J34] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage lysogeny module, integrase homolog (int), putative host cell surface-exposed lipoprotein, putative metallo-proteinase, repressor, Cro-like regulatory protein, and P1-antirepressor homolog genes, complete cds.] [NT:orf142] [LE:3941] [RE:4369] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_572186_c1_692 2323 6095 1284 427 190 2.4e-11 Description pir:[LN:I51116] [AC:151116] [PN:NF-180] [OR:Petromyzon marinus] [SR:, sea lamprey] [DB:pir2] >gp:[GI:g632549] [LN:PMU19361] [AC:U19361] [PN:NF-180] [OR:Petromyzon marinus] [SR:sea lamprey] [DB:genpept-vrtll [DE:Petromyzon marinus neurofilament subunit NF-180 mRNA, complete cds.] [NT:180 kDa neurofilament subunit] [LE:122] [RE:3454] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_581382_f2_281 2324 6096 183 60 46 0.040 Description sp:[LN:PA2A_PSETE] [AC:P23026] [OR:PSEUDONAJA TEXTILIS] [SR:,EASTERN BROWN SNAKE] [EC:3.1.1.4] [DE:PHOSPHOLIPASE A2 HOMOLOG, TEXTILOTOXIN A CHAIN,] [SP:P23026] [DB:swissprot] >pir:[LN:S29651] [AC:S29651] [PN:textilotoxin chain A] [CL:phospholipase A2] [OR:Pseudonaja textilis] [SR:, eastern brown snake] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5882753_c3_956 2325 6097 273 90 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_5911592_c3_887 2326 6098 924 307 89 0.0048 Description gp:[GI:e1347496:g3877859] [LN:CEF58G6] [AC:Z68217] [GN:F58G6.1] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F58G6, complete sequence.] [NT:Similarity to Chicken amphiphysin (PIR Acc. No.] [LE:4939:5597:5746] [RE:5253:5662:5844] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6070392_c3_911 2327 6099 708 235 458 2.2e-43 Description gp:[GI:g4980760] [LN:AE001708] [AC:AE001708:AE000512] [PN:16S pseudouridylate synthase] [GN:TM0264] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 20 of 136 of the complete genome.] [NT:similar to SP:P33918 PID:405907 GB:U00096] [LE:17059] [RE:1777811 [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6100150_c3_881 2328 6100 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6125262_c2_840 2329 6101 192 63 71 0.022 Description pir:[LN:S72295] [AC:572295] [PN:ribosomal protein S8] [GN:rps8] [OR:plastid Plasmodium falciparum] [DB:pir2] >gp:IIGI:e220199:g1171601] [LN:PFCOMPIRB] [AC:X95276] [GN:rps8] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:P. falciparum complete gene map of plastid-like DNA (IR-B).] [LE:5492] [RE:5878] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6317_c1_687 2330 6102 411 136 267 3.8e-23 Description pir:[LN:G69998] [AC:G69998] [PN:thioredoxin Hi homolog ytpP] [GN:ytpP] [CL:thioredoxin:thioredoxin homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185857:g2635468] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytpP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to thioredoxin H1] [LE:55500] [RE:55823] [DI:complement] >gp:[GI:g2293211] [LN:AF008220] [AC:AF008220] [PN:putative thioredoxin] [GN:ytpP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:124603] [RE:124926] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6689717_c3_849 2331 6103 615 204 72 0.0043 Description gp:[GI:g4105715] [LN:AF050754] [AC:AF050754] [PN:glucose 6-phosphate isomerase] [GN:GPI1] [OR:Giardia intestinalis] [DB:genpept-inv2] [EC:5.3.1.10] [DE:Giardia intestinalis glucose 6-phosphate isomerase (GPI1) gene, complete cds.] [NT:aminating isomerase] [LE:432] [RE:1232] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6828305_f3_438 2332 6104 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6906300_c2_826 2333 6105 1014 337 519 7.5e-50 Description sp:[LN:YTXK_BACSU] [AC:P37876] [GN:YTXK] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 37.4 KD PROTEIN IN ACKA-SSPA INTERGENIC REGION] [SP:P37876] [DB:swissprot] >pir:[LN:G70003] [AC:G70003:A49935] [PN:hypothetical protein ytxK:hypothetical protein (ackA 5′ region)] [GN:ytxK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185821:g2635432] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytxK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:alternate gene name:ythI] [SP:P37876] [LE:17948] [RE:18937] [DI:complement] >gp:[GI:g2293239] [LN:AF008220] [AC:AF008220] [PN:YtxK] [GN:ytxK] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to modification metilase AccI] [LE:161490] [RE:162479] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_6929651_c3_858 2334 6106 366 121 289 1.8e-25 Description pir:[LN:A69828] [AC:A69828] [PN:hypothetical protein yheA] [GN:yheA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e118298l:g2633315] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yheA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] LE:54726] [RE:55079] [DI:direct] >gp:[GI:e324964:g2226157] [LN:BSY14080] [AC:Y14080] [PN:hypothetical protein] [GN:yheA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 75 degrees:sspB upstream of glyB.] [LE:6651] [RE:7004] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_2335 6107 3204 1067 1849 5.1e-212 Description sp:[LN:DP3A_BACSU] [AC:O34623] [GN:DNAE] [OR:BACILLUS SUBTILIS] [EC:2.7.7.7] [DE:DNA POLYMERASE III, ALPHA CHAIN,] [SP:O346231 [DB:swissprot] >pir:[LN:D69617] [AC:D69617] [PN:DNA polymerase III (alpha subunit) dnaE] [GN:dnaE] [CL:DNA-directed DNA polymerase III alpha chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184172:g2635388] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:DNA polymerase III (alpha subunit)] [GN:dnaE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:034623] [LE:195212] [RE:198559] [DI:complement] >gp:[GI:g2293260] [LN:AF008220] [AC:AF008220] [PN:DNA-polymerase III alpha-chain] [GN:dnaE] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:184508] [RE:187855][DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_7244012_c1_723 2336 6108 1287 428 1768 3.3e-182 Description gp:[GI:e320380:g2168132] [LN:BIISOCIT] [AC:Y13358] [PN:isocitrate dehyrogenase] [OR:Bacillus israeli] [DB:genpept-bct1] [DE: Bacillus israeli isocitrate dehydrogenase gene.] [LE:242] [RE:15191 [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_785952_c1_688 2337 6109 459 152 380 4.0e-35 Description pir:[LN:A69999] [AC:A69999] [PN:phenylalanyl-tRNA synthetase (beta subunit) homolog ytpR] [GN:ytpR] [CL:Mycoplasma genitalium hypothetical protein MG449] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185855:g2635466] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytpR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to phenylalanyl-tRNA synthetase (beta] [LE:54055] [RE:54660] [DI:complement] >gp:[GI:g2293213] [LN:AF008220] [AC:AF008220] [PN:YtpR] [GN:ytpR] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to phenylalanine tRNA ligase of E. coli] [LE:125766] [RE:126371] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_803393_c3_947 2338 6110 732 243 536 1.2e-51 Description pir:[LN:H69407] [AC:H69407] [PN:conserved hypothetical protein AF1265] [CL:conserved hypothetical protein MJ1163] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649315] [LN:AE001017] [AC:AE001017:AE000782] [PN:conserved hypothetical protein] [GN:AF1265] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 90 of 172 of the complete genome.] [NT:similar to GB:L77117 PID:1591789 percent identity:] [LE:9248] [RE:9943] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_817555_f2_358 2339 6111 447 148 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_824086_c3_952 2340 6112 882 293 859 7.0e-86 Description pir:[LN:G70001] [AC:G70001] [PN:acetyl-CoA carboxylase homolog yttI] [GN:yttI] [CL:acetyl-CoA carboxylase, carboxyltransferase beta chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184170:g2635386] [LN:BSUB0015] [AC:Z99118:AL009126] [GN:yttI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [NT:similar to acetyl-CoA carboxylase] [LE:192636] [RE:193424] [DI:complement] >gp:[GI:g2293262] [LN:AF008220] [AC:AF008220] [PN:acetyl-CoA carboxylase subunit] [GN:yttI] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:189643] [RE:19043111 [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_82562_f3_523 2341 6113 1110 369 680 6.5e-67 Description pir:[LN:H69758] [AC:H69758] [PN:proline oxidase homolog ycgM] [GN:ycgM] [CL:proline dehydrogenase homolog yusM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182272:g2632606] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ycgM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to 415810.] [NT:similar to proline oxidase] [LE:149473] [RE:150384] [DI:direct] >gp:[GI:d1009589:g1805392] [LN:D50453] [AC:D50453] [GN:ycgM] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing the amyE-srfA region, complete cds.] [LE:23774] [RE:24685] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_867187_c3_851 2342 6114 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_954768_c3_892 2343 6115 1053 350 611 1.3e-59 Description sp:[LN:RIBG_BACSU] [AC:P17618] [GN:RIBG] [OR:BACILLUS SUBTILIS] [EC:3.5.4.—] [DE:RIBOFLAVIN-SPECIFIC DEAMINASE,] [SP:P17618] [DB:swissprot] >pir:[LN:PN0100] [AC:S45543:PN0100:E69692] [PN:riboflavin-specific deaminase ribG] [GN:ribG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g4l0125] [LN:BACDIA] [AC:L09228] [GN:ribG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis spoVA to serA region.] [LE:8266] [RE:9351] [DI:direct] >gp:[GI:g40085] [LN:BSRIB] [AC:X51510] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis riboflavin biosynthesis operon ribG, ribB, ribA, ribH, and ribT genes.] [NT:ribG protein product (AA 1–361)] [SP:P17618] [LE:1212] [RE:2297] [DI:direct] >gp:[GI:e1185597:g2634763] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:riboflavin-specific deaminase] [GN:ribG] [FN:niboflavin biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P17618] [LE:34232] [RE:35317] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_960012_c1_663 2344 6116 450 149 123 6.9e-08 Description gp:[GI:g3283053] [LN:AF054173] [AC:AF054173] [PN:staphylococcal accessory regulator A homolog] [GN:sarA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis staphylococcal accessory regulator Ahomolog (sarA) gene, complete cds.] [LE:887] [RE:1261] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_961562_f3_433 2345 6117 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_9785187_c3_867 2346 6118 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_9845327_c1_648 2347 6119 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000993_9884378_c3_916 2348 6120 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_10240925_c2_505 2349 6121 252 83 65 0.024 Description gp:[GI:d1037669:g4126667] [LN:AB016427] [AC:AB016427] [PN:transmembrane protein] [GN:bacM] [OR:Bacillus licheniformis] [SR:Bacillus licheniformis (strain:ATCC 10716) DNA] [DB:genpept-bct1] [DE:Bacillus licheniformis genes for transmemibrane protein, thioesterase II-like protein and bacitracin synthetase 1 (BA1),complete and partial cds.] [NT:putative] [LE:694] (RE:>1956] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_10553827_c3_663 2350 6122 216 71 132 7.6e-09 Description pir:[LN:F69808] [AC:F69808] [PN:hypothetical protein yfkK] [GN:yfkK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182777:g2633111] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfkK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:58273] [RE:58488] [DI:complement] >gp:[GI:d1024280:g2626823] [LN:D83967] [AC:D83967] [PN:YfkK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 74 degree region.] [LE:9433] [RE:9648] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_11125052_c1_439 2351 6123 1497 498 1715 1.4e-176 Description pir:[LN:D70008] [AC:D70008] [PN:nicotinate phosphoribosyltransferase homolog yueK] [GN:yueK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184252:g2635670] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yueK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to nicotinate phosphoribosyltransferase] [LE:61479] [RE:62951] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_11755317_c3_655 2352 6124 759 252 135 4.4e-07 Description pir:[LN:G70045] [AC:G70045] [PN:hypothetical protein yvqF] [GN:yvqF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249815:g2832819] [LN:BS43KBDNA] [AC:AJ223978] [PN:YvqF protein] [GN:yvqF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7kB DNA fragment from yvsA to yvqA.] [LE:31389] [RE:32114] [DI:direct] >gp:[GI:e1184389:g2635807] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yvqF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] LE:198173] [RE:198898] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_117687_c1_441 2353 6125 1377 458 1704 2.0e-175 Description sp:[LN:PUR8_BACSU] [AC:P12047] [GN:PURB:PURE] [OR:BACILLUS SUBTILIS] [EC:4.3.2.2] [DE:ADENYLOSUCCINATE LYASE, (ADENYLOSUCCINASE) ASL)] [SP:P12047] [DB:swissprot] >pir:[LN:WZBSDS] [AC:C29326:A69684] [PN:adenylosuccinate lyase,] [GN:purB] [CL:fumarate hydratase] [OR:Bacillus subtilis] [EC:4.3.2.2] [DB:pir1] [MP:18 min] >gp:[GI:g143366] [LN:BACPURF] [AC:J02732:K00047] [OR:Bacillus subtilis] [SR:B. subtilis (strain DE1 (prototroph DER. or W168)) DNA, clone pPZ] [DB:genpept-bct1] [DE:B. subtilis pur operon encoding purine biosynthesis enzymes, 12 genes.] [NT:adenylosuccinate lyase (PUR-B)] [LE:2056] [RE:3351] [DI:direct] >gp:[GI:e1182624:g2632958] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:adenylosuccinate lyase] [GN:purB] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.3.2.2] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [SP:P12047] [LE:99038] [RE:100333] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_11959438_c2_534 2354 6126 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1214075_f3_332 2355 6127 507 168 328 1.3e-29 Description gp:[GI:g4981674] [LN:AE001770] [AC:AE001770:AE000512] [PN:ferritin] [GN:TM1128] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 82 of 136 of the complete genome.] [NT:similar to GB:AE000782 percent identity:71.95;] [LE:15936] [RE:16430] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_12142768_f1_9 2356 6128 300 99 110 4.2e-06 Description pir:[LN:D71245] [AC:D71245 ] [PN:hypothetical protein PH0221] [GN:PH0221] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030234:g3256608] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:235aa long hypothetical protein] [GN:PH0221] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [LE:194212] [RE:194919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_12270011_f2_269 2357 6129 180 59 239 3.5e-20 Description gp:[GI:e1311097:g3320009] [LN:SEHLDGN] [AC:Z49220] [GN:agrD] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis hld and agr[A,B,C,D] genes.] [LE:1327] [RE:1467] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_12531558_f3_283 2358 6130 351 116 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_12603166_f3_301 2359 6131 303 100 100 1.9e-05 Description pir:[LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:A5009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1287557_f1_56 2360 6132 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_13678131_f3_393 2361 6133 840 279 299 1.5e-26 Description pir:[LN:E69787] [AC:E69787] [PN:hypothetical protein ydiL] [GN:ydiL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182580:g2632914] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [LE:47946] [RE:48680] [DI:complement] >gp:[GI:d1020504:g1945117] [LN:D88802] [AC:D88802] [GN:ydiL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:transmembrane] [LE:34948] [RE:35682] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1377337_c3_668 2362 6134 840 279 602 1.2e-58 Description gp:[GI:g310603] [LN:STAORFPHI] [AC:L19300] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (library:NCTC 8325) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA sequence encoding three ORFs, complete cds; prophage phi-11 sequence homology, 5′ flank.] [LE:2651] [RE:3100] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_13837927_c2_518 2363 6135 1155 384 621 1.2e-60 Description sp:[LN:TNPA_STAAU] [AC:P06696] [GN:TNPA] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE A (TRANSPOSON TN554)] [SP:P06696] [DB:swissprot] >pir:[LN:A24584] [AC:A24584] [PN:transposition regulatory protein tnpA] [GN:tnpA] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g581277] [LN:ISTN554] [AC:X03216:K02987] [PN:tnpA protein] [GN:tnpA] [OR:Staphylococcus aureus] [DB genpept-bct1] [DE:Staphylococcus aureus transposon Tn554.] [NT:(aa 1-361)] [SP:P06696] [LE:134] [RE:1219] [DI:direct] >gp:[GI:d1046007:g5360831] [LN:D86934] [AC:D86934] [PN:transposaseA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N045; tnpA] [LE:29383] [RE:30468] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_13851088_c3_609 2364 6136 1089 362 185 6.2e-14 Description gp:[GI:g1947171] [LN:CELE03H12] [AC:AF000299] [GN:E03H12.5] [OR:Caenorhabditis elegans] [SR: Caenorhabditis elegans strain=Bristol N2] [DB:genpept-inv2] [DE:Caenorhabditis elegans cosmid E03H12.] [NT:coded for by C. elegans cDNA yk170g3.5] [LE:1043:1176:1733] [RE:1131:1689:1762] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1385927_c1_442 2365 6137 711 236 851 4.9e-85 Description sp:[LN:PCRB_STAAU] [AC:Q53726] [OR:STAPHYLOCOCCUS AUREUS] [DE:PCRB PROTEIN] [SP:Q53726] [DB:swissprot] >pir:[LN:S39922] [AC:S39922:S27666 ] [PN:pcrB protein] [CL:pcrB protein] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g153061] [LN:STAPCRA] [AC:M63176] [GN:pcrA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain SA20) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus helicase required for T181 replication (pcrA) gene, complete cds.] [LE:256] [RE:939] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1410277_f1_15 2366 6138 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1414005_c1_477 2367 6139 579 192 324 3.4e-29 Description pir:[LN:F69815] [AC:F69815] [PN:hypothetical protein ygaC] [GN:ygaC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182857:g2633191] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:ygaC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:135417] [RE:135734] [DI:direct] >gp]GI:e281578:g1673391] [LN:BSZ82044] [AC:Z82044] [PN:hypothetical 12.2 kd protein] [GN:ygaC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [LE:2267] [RE:2584] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14460882_c3_694 2368 6140 240 79 365 1.6e-33 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14460882_f2_232 2369 6141 126 41 99 9.9e-05 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635][PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14581306_f3_377 2370 6142 303 100 160 8.2e-12 Description gp:[GI:g3676415] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf149] [LE:2068] [RE:2484] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14642137_f3_381 2371 6143 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14714077_c1_445 2372 6144 1209 402 715 1.3e-70 Description pir:[LN:G69794] [AC:G69794] [PN:hypothetical protein yerH] [GN:yerH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182643:g2632977] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [LE:122441] [RE:123631] [DI:direct] >gp:[GI:e1167977:g2577966] [LN:BSYERABCD] [AC:Y15254] [PN:YerH protein] [GN:yerH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 13kB DNA fragment, from yerA to sapB gene.] [LE:10086] [RE:11276] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14845336_f1_44 2373 6145 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14849093_c3_686 2374 6146 294 97 133 6.0e-09 Description pir:[LN:F71245] [AC:F71245] [PN:hypothetical protein PHS004] [GN:PHS004] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030236:g3256610] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:A1B009469] [PN:58aa long hypothetical protein] [GN:PHS004] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3] DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [NT:similar to GENPEPT:Z47547 percent identity:50.000] [LE:195255] [RE:195431] DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14883592_c1_429 2375 6147 2076 691 600 2.0e−58 Description pir:[LN:S40098] [AC:S40098] [PN:hypothetical protein] [OR:Clostridium butyricum] [DB:pir2] >gp:[GI:g436133] [LN:CBPYFOLY] [AC:Z29084] [OR:Clostridium butyricum] [DB:genpept-bct1] [DE:C. butyricum transposon containing tbcC gene.] [NT:product is similar to TnpB of transposon Tn554 from] [LE:1088] [RE:3070] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_14900826_c2_587 2376 6148 351 116 188 8.9e−15 Description gp:[GI:g208931] [LN:SYNORFLAC] [AC:M15619] [OR:synthetic construct] [SR:E. coli (strain SE5000) synthetic DNA, clone pKB1] [DB:genpept-syn] [DE:Synthetic E. coli ORF16/lacZ fusion protein, partial cds.] [NT:ORF16-lacZ fusion protein] [LE:29] [RE:>232] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_15033167_c3_671 2377 6149 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_15041430_c2_563 2378 6150 249 82 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_15121077_c1_448 2379 6151 1476 491 1626 3.7e−167 Description pir:[LN:B69795] [AC:B69795] [PN:amidase homolog yerM] [GN:yerM] [CL:indoleacetamide hydrolase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182648:g2632982] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:alternate gene name: yedB; similar to amidase] [LE:127844] [RE:129301] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_16110257_f3_287 2380 6152 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_16209675_c3_674 2381 6153 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_16219007_f3_366 2382 6154 921 306 1319 1.3e−134 Description sp:[LN:BLAC_STAAU] [AC:P00807] [GN:BLAZ] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.5.2.6] [DE:BETA-LACTAMASE PRECURSOR, (PENICILLINASE)] [SP:P00807] [DB:swissprot] >pir:[LN:PNSAP] [AC:A01002:A23600:A90289:S06757:A45789:B45789:D45789::S11784:A60992] [PN:beta-lactamase, precursor:cephalosporinase:penicillinase] [GN:blaZ] [CL:beta-lactamase I] [OR:Staphylococcus aureus] [EC:3.5.2.6] [DB:pir1] >gp:[GI:g551850] [LN:ENEBELAA] [AC:M60253] [PN:beta-lactamase] [GN:blaZ] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis (strain HH22) cDNA to mRNA] [DB:genpept-bct1] [EC:3.5.2.6] [DE:E. faecalis beta-lactamase mRNA, complete cds.] [LE:142] [RE:987] [DI:direct] >gp:[GI:g150717] [LN:PI25BLAZA] [AC:M15526] [PN:beta-lactamase] [GN:blaZ] [OR:Plasmid pI258] [SR:Plasmid pI258 (clone: pWN101) DNA] [DB:genpept-bct1] [EC:3.5.2.6] [DE:Plasmid pI258 (from S. aureus) beta-lactamase (blaZ), complete cds.] [LE:140] [RE:985] [DI:direct] >gp:[GI:g581568] [LN:SAPBLAZ] [AC:X04121] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus PC1 beta-lactamase gene blaZ from plasmid pI258.] [NT:beta-lactamase (aa 1–281)] [SP:P00807] [LE:140] [RE:985] [DI:direct] >gp:[GI:g581590] [LN:SATN552] [AC:X52734] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus Tn552 transposable element.] [NT:blaZ protein (AA 1–281)] [SP:P00807] [LE:5399] [RE:6244] [DI:direct] >gp:[GI:g581591] [LN:SATNBLAZ] [AC:X16471] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus transposon Tn4002 blaZ gene forbeta-lactamase.] [NT:beta-lactamase (AA 1–281)] [SP:P00807] [LE:142] [RE:987] [DI:direct] >gp:[GI:g1575125] [LN:SAU58139] [AC:U58139] [PN:beta-lactamase] [GN:blaZ] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus strain = a53] [DB:genpept-bct1] [DE:Staphylococcus aureus beta-lactamase (blaz) gene, complete cds.] [LE:142] [RE:987] [DI:direct] >gp:[GI:g537336] [LN:STALACBAA] [AC:M25252] [PN:beta-lactamase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus (clone pPC1) beta-lactamase gene, complete cds.] [LE:123] [RE:968] [DI:direct] >gp:[GI:g537337] [LN:STALACBAB] [AC:M25253] [PN:beta-lactamase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus (clone pS1) beta-lactamase gene, complete cds.] [LE:29] [RE:874] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_16677343_c1_412 2383 6155 447 148 111 1.3e−06 Description sp:[LN:Y357_METJA] [AC:Q57803] [GN:MJ0357] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ0357] [SP:Q57803] [DB:swissprot] >pir:[LN:E64344] [AC:E64344] [PN:hypothetical protein MJ0357] [OR:Methanococcus jannaschii] [DB:pir2] [MP:REV326407–325940] >gp:[GI:g1591066] [LN:U67489] [AC:U67489:L77117] [PN:M. jannaschii predicted coding region MJ0357] [GN:MJ0357] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 31 of 150 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:1632] [RE:2099] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_16695300_f3_307 2384 6156 1113 370 586 5.9e−57 Description pir:[LN:H69815] [AC:H69815] [PN:hypothetical protein ygaE] [GN:ygaE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182859:g2633193] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:ygaE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:137853] [RE:138914] [DI:complement] >gp:[GI:e281580:g1673393] [LN:BSZ82044] [AC:Z82044] [PN:hypothetical 40.7 kd protein] [GN:ygaE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [LE:4703] [RE:5764] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_19536693_c3_645 2385 6157 318 105 232 1.9e−19 Description pir:[LN:A69795] [AC:A69795] [PN:conserved hypothetical protein yerL] [GN:yerL] [CL:probable glu-tRNA amidotransferase C chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2589194] [LN:AF008553] [AC:AF008553] [PN:Glu-tRNAGln amidotransferase subunit C] [GN:gatC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis Glu-tRNAGln amidotransferase subunits C (gatC), A (gatA) and B (gatB) genes, complete cds.] [LE:412] [RE:702] [DI:direct] >gp:[GI:g2114425] [LN:BSU92466] [AC:U92466] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis strain JH642 amidase-like protein, partial cds, osmoregulated proline transporter (opuE) gene, complete cds and SapB (sapB) gene, partial cds.] [NT:similar to Synechocystis sp. hypothetical protein,] [LE:278] [RE:568] [DI:complement] >gp:[GI:e1182647:g2632981] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:alternate gene name: yedA; similar to hypothetical] [LE:127538] [RE:127828] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_19570253_f2_152 2386 6158 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1958183_f1_121 2387 6159 648 215 976 2.8e−98 Description gp:[GI:e1311096:g3320008] [LN:SEHLDGN] [AC:Z49220] [GN:agrB] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis hld and agr[A,B,C,D] genes.] [LE:759] [RE:1343] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1972278_f3_306 2388 6160 300 99 316 2.4e−28 Description sp:[LN:GSAB_BACSU] [AC:P71084] [GN:GSAB] [OR:BACILLUS SUBTILIS] [EC:5.4.3.8] [DE:(GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT)] [SP:P71084] [DB:swissprot] >gp:[GI:e281581:g1673394] [LN:BSZ82044] [AC:Z82044] [PN:glutamate-1-semialdehyde aminotransferase] [GN:gsaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [SP:P71084] [LE:5984] [RE:7273] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_1988811_c3_672 2389 6161 1083 360 779 2.1e−77 Description pir:[LN:A69802] [AC:A69802] [PN:A/G-specific adenine glycosylase homolog yfhQ] [GN:yfhQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182852:g2633186] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to A/G-specific adenine glycosylase] [LE:132342] [RE:133451] [DI:direct] >gp:[GI:d1025399:g2804547] [LN:D85082] [AC:D85082] [PN:YfhQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:25233] [RE:26342] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_20100206_f2_137 2390 6162 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_20344411_c2_508 2391 6163 336 111 440 1.8e−41 Description sp:[LN:CH10_STAEP] [AC:P48227] [GN:GROES:HSP10] [OR:STAPHYLOCOCCUS EPIDERMIDIS] [DE:10)] [SP:P48227] [DB:swissprot] >gp:[GI:g535341] [LN:SEU13618] [AC:U13618] [PN:heat shock protein 10] [GN:hsp10] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis 9759 heat shock protein 10 (hsp10) and heat shock protein 60 (hsp60) genes, complete cds.] [LE:105] [RE:389] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_20348427_c2_578 2392 6164 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_2037838_f2_223 2393 6165 249 82 122 8.8e−08 Description pir:[LN:A71136] [AC:A71136] [PN:hypothetical protein PH0853] [GN:PH0853] [CL:isoleucine--tRNA ligase] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030890:g3257264] [LN:AP000003] [AC:AP000003:AB009484:AB009485:AB009486:AB009487:AB009488:AB009489] [PN:134aa long hypothetical protein] [GN:PH0853] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 544001–777000 nt. position(3/7).] [LE:216446] [RE:216850] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_20414052_f1_49 2394 6166 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_20735686_f1_87 2395 6167 957 318 853 3.0e−85 Description sp:[LN:YYBQ_BACSU] [AC:P37487] [GN:YYBQ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 34.0 KD PROTEIN IN COTF-TETB INTERGENIC REGION] [SP:P37487] [DB:swissprot] >pir:[LN:S65980] [AC:S65980:D70088] [PN:conserved hypothetical protein yybQ] [GN:yybQ] [CL:conserved hypothetical protein MJ0608] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005728:g467340] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:16200] [RE:17129] [DI:direct] >gp:[GI:e1184781:g2636602] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yybQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to hypothetical proteins] [SP:P37487] [LE:168132] [RE:169061] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_20881510_c2_510 2396 6168 492 163 216 9.6e−18 Description gp:[GI:g3688823] [LN:AF084104] [AC:AF084104] [PN:hypothetical protein] [OR:Bacillus firmus] [DB:genpept-bct2] [DE:Bacillus firmus AcsA (acsA) gene, partial cds; SspA (sspA), hypothetical protein, maltose transportor ATP-binding protein (malK), leucine-rich protein transcriptional regulator (lrpR), hypothetical proteins, ABC transporter ATP-binding protein (natC), NatA (natA), NatB (natB), and hypothetical protein genes, complete cds; and SpoIIIJ (spoIIIJ) gene, partial cds.] [NT:Orf15; similar to transcription regulator YtrA from] [LE:9870] [RE:10229] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_2125637_f3_294 2397 6169 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_21494536_c3_644 2398 6170 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_21516287_f1_17 2399 6171 135 44 100 1.9e−05 Description pir:[LN:G64564] [AC:G64564] [PN:hypothetical protein HP0359] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313473] [LN:AE000553] [AC:AE000553:AE000511] [PN:H. pylori predicted coding region HP0359] [GN:HP0359] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 31 of 134 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:250] [RE:315] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_21616078_c1_440 2400 6172 192 63 135 3.7e−09 Description pir:[LN:C69792] [AC:C69792] [PN:hypothetical protein yebG] [GN:yebG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2239294] [LN:BSU51115] [AC:U51115] [PN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis CotA (cotA), GabP (gabP), YeaB (yeaB), YeaC (yeaC), YebA (yebA), GMP synthetase (guaA) genes, complete cds, and AIR carboxylase I (purE) gene, partial cds.] [NT:yebG] [LE:15312] [RE:15509] [DI:direct] >gp:[GI:e1182621:g2632955] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yebG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [LE:96901] [RE:97098] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_21676433_c3_634 2401 6173 1137 378 192 3.3e−12 Description gp:[GI:e1292355:g3127839] [LN:SC1A6] [AC:AL023496] [PN:hypothetical protein] [GN:SC1A6.07c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 1A6.] [NT:SC1A6.07c, unknown, len: 813] [LE:7442] [RE:9070] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_22289077_c2_514 2402 6174 546 181 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_22688428_c2_584 2403 6175 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23438461_c1_413 2404 6176 687 228 103 0.029 Description gp:[GI:g5306158] [LN:AF160864] [AC:AF160864] [PN:orf1386] [GN:orf1386] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:Open reading frame ymf77 (CPGN); ATA initiation] [LE:22317] [RE:26477] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23495437_f2_262 2405 6177 1305 434 1004 3.0e−101 Description pir:[LN:JC4864] [AC:JC4864] [PN:aspartate transaminase,] [GN:aspAT] [OR:Bacillus circulans] [EC:2.6.1.1] [DB:pir2] >gp:[GI:e216734:g1147557] [LN:BCASPAMIN] [AC:X94433] [PN:Aspartate aminotransferase] [OR:Bacillus circulans subsp. alkalophilus] [DB:genpept-bct1] [EC:2.6.1.1] [DE:B. circulans aspartate aminotransferase gene.] [LE:367] [RE:1665] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23572125_c2_571 2406 6178 534 177 393 1.7e−36 Description sp:[LN:YKHA_BACSU] [AC:P49851] [GN:YKHA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 20.1 KD PROTEIN IN HMP 5′REGION (ORF1)] [SP:P49851] [DB:swissprot] >gp:[GI:d1011919:g1063246] [LN:BAC168TRP2] [AC:D78189] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis hmp DNA for 7 ORFs, complete cds.] [NT:low homology to P14 protein of Heamophilus] [LE:241] [RE:780] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23595386_c1_484 2407 6179 627 208 271 1.4e−23 Description pir:[LN:H70032] [AC:H70032] [PN:glycerate dehydrogenase homolog yvcT] [GN:yvcT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186156:g2635981] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvcT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to glycerate dehydrogenase] [LE:162076] [RE:163053] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23600175_f2_274 2408 6180 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23629202_c1_433 2409 6181 381 126 598 3.2e−58 Description sp:[LN:BLAI_STAAU] [AC:P18415] [GN:BLAI:PENI] [OR:STAPHYLOCOCCUS AUREUS] [DE:REPRESSOR PROTEIN)] [SP:P18415] [DB:swissprot] >pir:[LN:S11782] [AC:S11782:S34446] [PN:regulatory protein blaI] [GN:blaI] [CL:regulatory protein blaI] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46758] [LN:SATN552] [AC:X52734] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus Tn552 transposable element.] [NT:blaI protein (AA 1–126)] [SP:P18415] [LE:3165] [RE:3545] [DI:complement] >gp:[GI:g152967] [LN:STABLA] [AC:M62650] [GN:blaI] [FN:putative blaZ repressor] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus blaZ gene, 5′ end; blaR1 gene, complete cds; blaI gene, complete cds; and binR gene, 5′ end.] [LE:1903] [RE:2283] [DI:direct] >gp:[GI:g152970] [LN:STABLAIA] [AC:M92376] [PN:beta-lactamase repressor] [GN:BlaI] [FN:represses the production of the blaZ product] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain RN4) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus beta-lactamase repressor (BlaI) gene, complete cds.] [NT:no obvious promoters were found in the region] [LE:16] [RE:396] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23672302_f3_302 2410 6182 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23672562_c1_411 2411 6183 297 98 86 0.0034 Description gp:[GI:e8900:g1335718] [LN:PFRESAR1] [AC:X05182] [PN:ring-infected eryrthrocyte surface antigen] [GN:RESA] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:P. falciparum FC27 Ag46 RESA mRNA for ring-infected eryrthrocyte surface antigen.] [SP:P13830] [LE:<1] [RE:>955] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23727212_f2_175 2412 6184 303 100 87 0.00045 Description pir:[LN:B69818] [AC:B69818] [PN:conserved hypothetical protein yhaH] [GN:yhaH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183002:g2633336] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhaH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to hypothetical proteins from B. subtilis] [LE:73870] [RE:74226] [DI:complement] >gp:[GI:e325179:g2226119] [LN:BSY14077] [AC:Y14077] [PN:Hypothetical protein] [GN:yhaH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 10.6 Kb chromosomal DNA: glyB-prsA region.] [LE:6687] [RE:7043] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23727250_f3_362 2413 6185 1395 464 1167 1.6e−118 Description sp:[LN:DHA2_BACSU] [AC:P39616] [GN:YWDH:IPA-58R] [OR:BACILLUS SUBTILIS] [EC:1.2.1.3] [DE:PROBABLE ALDEHYDE DEHYDROGENASE YWDH,] [SP:P39616] [DB:swissprot] >pir:[LN:S39713] [AC:S39713:C70054] [PN:aldehyde dehydrogenase homolog ywdH:protein ipa-58r] [GN:ywdH] [CL:aldehyde dehydrogenase (NAD+):aldehyde dehydrogenase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413982] [LN:BSGENR] [AC:X73124] [GN:ipa-58r] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39616] [LE:59908] [RE:61281] [DI:complement] >gp:[GI:e1186295:g2636331] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywdH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name: ipa-58r; similar to aldehyde] [SP:P39616] [LE:96681] [RE:98054] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_2379658_f2_144 2414 6186 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_23850907_f1_109 2415 6187 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24017175_f2_202 2416 6188 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24218791_f1_86 2417 6189 588 195 525 1.7e−50 Description pir:[LN:C70008] [AC:C70008] [PN:pyrazinamidase/nicotinamidase homolog yueJ] [GN:yueJ] [CL:hypothetical protein b1011] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184253:g2635671] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yueJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to pyrazinamidase/nicotinamidase] [LE:62967] [RE:63518] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24225632_f2_253 2418 6190 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24257827_c2_511 2419 6191 387 128 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24265676_f1_120 2420 6192 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24350953_f2_151 2421 6193 132 43 72 0.017 Description pir:[LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24353382_c3_608 2422 6194 1623 540 2592 1.6e−269 Description gp:[GI:g535342] [LN:SEU13618] [AC:U13618] [PN:heat shock protein 60] [GN:hsp60] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphylococcus epidermidis 9759 heat shock protein 10 (hsp10) and heat shock protein 60 (hsp60) genes, complete cds.] [LE:445] [RE:2064] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24407787_c1_483 2423 6195 354 117 84 0.029 Description sp:[LN:SERX_YEAST] [AC:P40054] [GN:YER081W] [OR:SACCHAROMYCES CEREVISIAE] [SR:,BAKER'S YEAST] [EC:1.1.1.95] [DE:(PGDH)] [SP:P40054] [DB:swissprot] >pir:[LN:S50584] [AC:S50584] [PN:probable phosphoglycerate dehydrogenase, YER081w] [OR:Saccharomyces cerevisiae] [EC:1.1.1.95] [DB:pir2] [MP:5R] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24415942_c2_516 2424 6196 840 279 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24475252_c2_533 2425 6197 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24475252_f1_2 2426 6198 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_24885938_c3_639 2427 6199 642 213 302 7.4e−27 Description pir:[LN:B69792] [AC:B69792] [PN:hypothetical protein yebF] [GN:yebF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2239293] [LN:BSU51115] [AC:U51115] [PN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis CotA (cotA), GabP (gabP), YeaB (yeaB), YeaC (yeaC), YebA (yebA), GMP synthetase (guaA) genes, complete cds, and AIR carboxylase I (purE) gene, partial cds.] [NT:yebF] [LE:15046] [RE:15312] [DI:direct] >gp:[GI:e1182620:g2632954] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yebF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [LE:96635] [RE:96901] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_25428507_c1_457 2428 6200 576 191 109 0.0063 Description pir:[LN:G71609] [AC:G71609] [PN:hypothetical protein PFB0650w] [GN:PFB0650w] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845240] [LN:AE001408] [AC:AE001408:AE001362] [PN:hypothetical protein] [GN:PFB0650w] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 45 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:4458] [RE:11960] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_25595387_f1_93 2429 6201 432 143 326 2.1e−29 Description gp:[GI:g3676415] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf149] [LE:2068] [RE:2484] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_25603388_f1_122 2430 6202 1293 430 2112 1.2e−218 Description gp:[GI:g2981295] [LN:AF012132] [AC:AF012132] [PN:histidine kinase] [GN:agrC] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis agr system including response regulator(agrA), histidine kinase (agrC), AgrD (agrD), AgrB (agrB) and deltatoxin (hld) genes, complete cds.] [NT:AgrC; similar to S. aureus and S. lugdunensis AgrC] [LE:975] [RE:2264] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_256265_c2_564 2431 6203 1092 363 538 7.3e−52 Description pir:[LN:F70045] [AC:F70045] [PN:two-component sensor histidine kinase homolog yvqE] [GN:yvqE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249816:g2832820] [LN:BS43KBDNA] [AC:AJ223978] [PN:YvqE protein] [GN:yvqE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7 kB DNA fragment from yvsA to yvqA.] [LE:32111] [RE:33193] [DI:direct] >gp:[GI:e1184388:g2635806] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yvqE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to two-component sensor histidine kinase] [LE:197094] [RE:198176] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_25678438_c2_583 2432 6204 474 157 334 3.0e−30 Description pir:[LN:E70344] [AC:E70344] [PN:conserved hypothetical protein aq_495] [GN:aq_495] [CL:bacterioferritin comigratory protein:alkyl hydroperoxidase c22 protein homology] [OR:Aquifex aeolicus] [DB:pir2] >gp:[GI:g2983147] [LN:AE000692] [AC:AE000692:AE000657] [PN:hypothetical protein] [GN:aq_495] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 24 of 109 of the complete genome.] [LE:11182] [RE:11667] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_25781392_f1_54 2433 6205 1029 342 225 5.7e−17 Description pir:[LN:H69815] [AC:H69815] [PN:hypothetical protein ygaE] [GN:ygaE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182859:g2633193] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:ygaE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:137853] [RE:138914] [DI:complement] >gp:[GI:e281580:g1673393] [LN:BSZ82044] [AC:Z82044] [PN:hypothetical 40.7 kd protein] [GN:ygaE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [LE:4703] [RE:5764] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_25790718_c2_541 2434 6206 315 104 349 7.7e−32 Description pir:[LN:B69794] [AC:B69794] [PN:hypothetical protein yerC] [GN:yerC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2465565] [LN:AF011544] [AC:AF011544] [PN:YecD] [GN:yecD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis phosphoribosylaminoimidazole-carboxamideformyltransferase (purH-J) gene, partial cds, phosphoribosylglycinamide synthetase (purD), YecA (yecA), putative adenine deaminase (yecB), YecC (yecC), and YecD (yecD) genes, complete cds, and putative glutamate synthase (yecE) gene, partial cds.] [NT:no apparent homology has been identified] [LE:6547] [RE:6861] [DI:direct] >gp:[GI:e1182638:g2632972] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [LE:115237] [RE:115551] [DI:direct] >gp:[GI:e1167973:g2577962] [LN:BSYERABCD] [AC:Y15254] [PN:YerC protein] [GN:yerC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 13 kB DNA fragment, from yerA to sapB gene.] [LE:2882] [RE:3196] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26177163_c1_466 2435 6207 1272 423 971 9.5e−98 Description sp:[LN:AMPS_BACSU] [AC:P39762] [GN:AMPS] [OR:BACILLUS SUBTILIS] [EC:3.4.11.—] [DE:AMINOPEPTIDASE AMPS,] [SP:P39762] [DB:swissprot] >pir:[LN:C69585] [AC:C69585] [PN:aminopeptidase ampS] [GN:ampS] [CL:Bacillus aminopeptidase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185035:g2633816] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:aminopeptidase] [GN:ampS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.4.11.—] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [SP:P39762] [LE:119612] [RE:120844] [DI:complement] >gp:[GI:g3282130] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:aminopeptidase] [GN:ampS] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to ampS gene with GenBan Accession Number] [LE:20100] [RE:21332] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26205151_f2_147 2436 6208 156 51 117 3.0e−07 Description pir:[LN:B71245] [AC:B71245] [PN:hypothetical protein PH0220] [GN:PH0220] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030232:g3256606] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:171aa long hypothetical protein] [GN:PH0220] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:192864] [RE:193379] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26209510_c1_478 2437 6209 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26209577_f3_358 2438 6210 1068 355 892 2.2e−89 Description pir:[LN:C69811] [AC:C69811] [PN:nitric-oxide synthase homolog yflM] [GN:yflM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182753:g2633087] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yflM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to nitric-oxide synthase] [LE:33422] [RE:34432] [DI:direct] >gp:[GI:d1023169:g2443235] [LN:D86417] [AC:D86417] [PN:YflM] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:14090] [RE:15100] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26212875_c3_616 2439 6211 318 105 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26354787_c2_499 2440 6212 744 247 121 0.00043 Description gp:[GI:g3549261] [LN:AF057019] [AC:AF057019] [PN:interaptin] [GN:abpD] [OR:Dictyostelium discoideum] [DB:genpept-inv2] [DE:Dictyostelium discoideum interaptin (abpD) gene, complete cds.] [LE:1861:2796:7392] [RE:2378:7315:7570] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26369052_f1_91 2441 6213 141 46 101 1.5e−05 Description gp:[GI:g3676415] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf149] [LE:2068] [RE:2484] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26593808_f2_159 2442 6214 981 326 753 1.2e−74 Description pir:[LN:H69801] [AC:H69801] [PN:hypothetical protein yfhP] [GN:yfhP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182851:g2633185] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:131143] [RE:132126] [DI:complement] >gp:[GI:d1025398:g2804546] [LN:D85082] [AC:D85082] [PN:YfhP] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:24034] [RE:25017] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26689703_c3_679 2443 6215 453 150 562 2.1e−54 Description sp:[LN:FUR3_BACSU] [AC:P71086] [GN:YGAG] [OR:BACILLUS SUBTILIS] [DE:FERRIC UPTAKE REGULATION PROTEIN HOMOLOG 3] [SP:P71086] [DB:swissprot] >pir:[LN:B69816] [AC:B69816] [PN:transcription regulator Fur family homolog ygaG] [GN:ygaG] [CL:ferric uptake regulator] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182862:g2633196] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:ygaG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to transcriptional regulator (Fur family)] [SP:P71086] [LE:141173] [RE:141610] [DI:direct] >gp:[GI:e281583:g1673396] [LN:BSZ82044] [AC:Z82044] [PN:hypothetical 16.4 kd protein] [GN:ygaG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [NT:homology to ferric uptake regulation protein] [SP:P71086] [LE:8023] [RE:8460] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26756500_c3_654 2444 6216 777 258 721 2.9e−71 Description pir:[LN:E69810] [AC:E69810] [PN:methionine aminopeptidase homolog yflG] [GN:yflG] [CL:Escherichia coli methionyl aminopeptidase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182759:g2633093] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yflG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to methionine aminopeptidase] [LE:36423] [RE:37172] [DI:complement] >gp:[GI:d1023163:g2443229] [LN:D86417] [AC:D86417] [PN:YflG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:11350] [RE:12099] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_26757312_f3_321 2445 6217 1197 398 577 5.3e−56 Description gp:[GI:e1423916:g4584097] [LN:BAJ10131] [AC:AJ010131] [GN:yfkH] [OR:Bacillus cereus] [DB:genpept-bct1] [DE:Bacillus cereus yfkH gene and partial ykvW, bc333c genes.] [LE:863] [RE:1732] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_285808_f2_146 2446 6218 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_29307187_c3_687 2447 6219 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_29500277_f3_392 2448 6220 171 56 169 9.2e−13 Description gp:[GI:g1196510] [LN:MSGTCWPA] [AC:M15467] [PN:unknown protein] [OR:Mycobacterium tuberculosis] [SR:Mycobacterium tuberculosis (strain Erdman) DNA] [DB:genpept-bct1] [DE:M. tuberculosis 65 kDa antigen (cell wall protein a) gene.] [NT:ORF F175; putative] [LE:242] [RE:769] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_2992943_c1_425 2449 6221 624 207 382 2.5e−35 Description gp:[GI:g4981569] [LN:AE001764] [AC:AE001764:AE000512] [PN:ABC transporter, ATP-binding protein] [GN:TM1028] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 76 of 136 of the complete genome.] [NT:similar to GB:AE000782 percent identity: 60.48;] [LE:5922] [RE:6803] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_30265640_c3_693 2450 6222 1080 359 684 2.4e−67 Description pir:[LN:E71373] [AC:E71373] [PN:probable regulatory protein (pfoS/R)] [GN:TP0038] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322295] [LN:AE001189] [AC:AE001189:AE000520] [PN:regulatory protein (pfoS/R)] [GN:TP0038] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 5 of 87 of the complete genome.] [NT:similar to GP:1354775 percent identity: 100.00;] [LE:1177] [RE:2229] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_30506437_c2_517 2451 6223 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_30677268_c1_419 2452 6224 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_31273377_f1_113 2453 6225 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3128452_c1_438 2454 6226 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_31289637_c2_545 2455 6227 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_31534456_c3_689 2456 6228 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_32037826_c1_451 2457 6229 1476 491 1119 2.0e−113 Description pir:[LN:E69793] [AC:E69793] [PN:RNA methyltransferase homolog yefA] [GN:yefA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182653:g2632987] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yefA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:alternate gene name: yerS; similar to RNA] [LE:136409] [RE:137788] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3251577_c3_642 2458 6230 2190 729 3095 0.0 Description sp:[LN:PCRA_STAAU] [AC:Q53727] [GN:PCRA] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.6.1.—] [DE:ATP-DEPENDENT HELICASE PCRA,] [SP:Q53727] [DB:swissprot] >pir:[LN:S39923] [AC:S39923:S27667] [PN:DNA helicase pcrA] [GN:pcrA] [CL:helicase II] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g153062] [LN:STAPCRA] [AC:M63176] [PN:helicase] [GN:pcrA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain SA20) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus helicase required for T181 replication (pcrA)gene, complete cds.] [LE:943] [RE:2970] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_32634387_f2_133 2459 6231 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_32680_c3_692 2460 6232 936 311 776 4.4e−77 Description sp:[LN:STSP_STAAU] [AC:P04188] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.4.21.19] [DE:PROTEINASE) (V8 PROTEINASE) (ENDOPROTEINASE GLU-C)] [SP:P04188] [DB:swissprot] >pir:[LN:PRSASK] [AC:A26812:A00966] [PN:glutamyl endopeptidase, precursor:staphylococcal serine proteinase] [CL:staphylococcal serine proteinase] [OR:Staphylococcus aureus] [EC:3.4.21.19] [DB:pir1] >gp:[GI:g46687] [LN:SASP] [AC:Y00356] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus V8 serine protease gene.] [NT:preproenzyme (AA −68 to 268)] [SP:P04188] [LE:354] [RE:1364] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_32689162_f3_397 2461 6233 807 268 1384 1.6e−141 Description gp:[GI:g2981299] [LN:AF012132] [AC:AF012132] [PN:unknown] [GN:orf5] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis agr system including response regulator(agrA), histidine kinase (agrC), AgrD (agrD), AgrB (agrB) and deltatoxin (hld) genes, complete cds.] [NT:similar to S. aureus and S. lugdunensis orf5] [LE:3778] [RE:4572] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_32696088_c2_580 2462 6234 1749 582 1899 4.3e−196 Description pir:[LN:G69815] [AC:G69815] [PN:ABC transporter (ATP-binding protein) homolog ygaD] [GN:ygaD] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182858:g2633192] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:ygaD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:136007] [RE:137776] [DI:direct] >gp:[GI:e281579:g1673392] [LN:BSZ82044] [AC:Z82044] [PN:unidentified transporter-ATP binding] [GN:ygaD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [LE:2857] [RE:4626] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_33237786_f3_316 2463 6235 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3330167_f3_398 2464 6236 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_33456965_c2_592 2465 6237 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_33463542_c1_487 2466 6238 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3361326_c2_588 2467 6239 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_33631292_c1_461 2468 6240 414 137 84 0.048 Description gp:[GI:g2182758] [LN:BBU42599] [AC:U42599] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct1] [DE:Borrelia burgdorferi plasmid cp18, OspE (ospE) gene, partial cds.] [NT:OrfE] [LE:1395] [RE:1967] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_33631626_c1_489 2469 6241 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3392952_c1_410 2470 6242 591 196 195 1.6e−15 Description gp:[GI:e247149:g1926347] [LN:LBPHIG1E] [AC:X98106] [GN:Rorf172] [OR:Bacteriophage phigle] [DB:genpept-phg] [DE:Lactobacillus bacteriophage phigle complete genomic DNA.] [LE:29618] [RE:30136] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34023427_c3_651 2471 6243 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34164192_c3_640 2472 6244 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34275325_c2_576 2473 6245 1521 506 238 5.0e−17 Description sp:[LN:TAGH_BACSU] [AC:P42954] [GN:TAGH] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID TRANSLOCATION ATP-BINDING PROTEIN TAGH] [SP:P42954] [DB:swissprot] >pir:[LN:S69203] [AC:S69203:A69721] [PN:teichoic acid translocation ATP-binding protein tagH] [GN:tagH] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g755153] [LN:BSU13832] [AC:U13832] [PN:ATP-binding protein] [GN:tagH] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 highly hydrophobic integral membrane protein(tagG) gene and ATP-binding protein (tagH) gene, complete cds.] [LE:1134] [RE:2717] [DI:direct] >gp:[GI:e1184476:g2636096] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP-binding protein] [GN:tagH] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P42954] [LE:75534] [RE:77117] [DI:complement] >gp:[GI:e1184476:g2636096] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP-binding protein] [GN:tagH] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P42954] [LE:75534] [RE:77117] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34383400_c3_618 2474 6246 582 193 78 0.010 Description gp:[GI:g4726117] [LN:ATAC006436] [AC:AC006436] [GN:F13J11.13] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln2] [DE:Arabidopsis thaliana chromosome II BAC F13J11 genomic sequence, complete sequence.] [NT:unknown protein] [LE:50474] [RE:50725] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34557262_c2_585 2475 6247 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34572177_c2_513 2476 6248 735 244 147 1.5e−08 Description pir:[LN:S42928] [AC:S42928] [PN:probable membrane-spanning protein] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g459263] [LN:SESTPSMP] [AC:Z30586] [PN:membrane spanning protein (putative)] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis (968) genes for potential ABC transporter and potential membrane spanning protein.] [LE:896] [RE:1666] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_34652177_c3_656 2477 6249 648 215 546 1.0e−52 Description pir:[LN:E70045] [AC:E70045] [PN:two-component response regulator [YvqE] homolog yvqC] [GN:yvqC] [CL:regulatory protein comA:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249817:g2832821] [LN:BS43KBDNA] [AC:AJ223978] [PN:YvqC protein] [GN:yvqC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7 kB DNA fragment from yvsA to yvqA.] [LE:33171] [RE:33806] [DI:direct] >gp:[GI:e1184387:g2635805] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yvqC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to two-component response regulator [YvqE]] [LE:196481] [RE:197116] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_35428128_c3_635 2478 6250 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_35443785_c2_562 2479 6251 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_35885_f3_383 2480 6252 504 167 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36119093_c3_643 2481 6253 2001 666 2102 1.3e−217 Description pir:[LN:F69794] [AC:F69794] [PN:DNA ligase (NAD+),] [GN:yerG] [CL:polydeoxyribonucleotide synthase (NAD+)] [OR:Bacillus subtilis] [EC:6.5.1.2] [DB:pir1] >gp:[GI:e1182642:g2632976] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to DNA ligase] [LE:120419] [RE:122425] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36195250_f3_359 2482 6254 822 273 375 1.4e−34 Description sp:[LN:PHEA_METJA] [AC:Q58054] [GN:PHEA:MJ0637] [OR:METHANOCOCCUS JANNASCHII] [EC:4.2.1.51] [DE:PROBABLE PREPHENATE DEHYDRATASE, (PDT)] [SP:Q58054] [DB:swissprot] >pir:[LN:E64379] [AC:E64379] [PN:prephenate dehydratase,] [CL:prephenate dehydratase:prephenate dehydratase homology] [OR:Methanococcus jannaschii] [EC:4.2.1.51] [DB:pir2] [MP:REV567914–567096] >gp:[GI:g1591349] [LN:U67511] [AC:U67511:L77117] [PN:chorismate mutase/prephenate dehydratase (pheA)] [GN:MJ0637] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 53 of 150 of the complete genome.] [NT:similar to SP:P43909 PID:683585 percent identity:] [LE:7667] [RE:8485] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36219692_c3_648 2483 6255 561 186 133 2.0e−08 Description pir:[LN:A36886] [AC:A36886] [PN:surface protein PAg negative regulator par] [GN:par] [OR:Streptococcus sobrinus] [DB:pir2] >gp:[GI:d1003084:g425488] [LN:STRREPRESP] [AC:D13323] [PN:repressor protein] [GN:par] [OR:Streptococcus sobrinus] [SR:Streptococcus sobrinus (strain MT3791) DNA, clone pPG11] [DB:genpept-bct1] [DE:Streptococcus sobrinus gene for repressor protein of surface protein antigen gene (pag), complete cds.] [NT:This ORF2 starts at the GTG codon (position 1162)] [LE:1162] [RE:1773] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36220000_c2_525 2484 6256 1047 348 557 7.0e−54 Description pir:[LN:D69856] [AC:D69856] [PN:conserved hypothetical protein ykgB] [GN:ykgB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181502:g2632022] [LN:BSAJ2571] [AC:AJ002571] [PN:YkgB] [GN:ykgB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:22000] [RE:23049] [DI:complement] >gp:[GI:e1183321:g2633655] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykgB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to hypothetical proteins] [LE:174949] [RE:175998] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36221013_f2_135 2485 6257 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36336012_c3_664 2486 6258 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36367302_c3_600 2487 6259 564 187 122 2.7e−06 Description sp:[LN:Y359_METJA] [AC:Q57805] [GN:MJ0359] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ0359] [SP:Q57805] [DB:swissprot] >pir:[LN:G64344] [AC:G64344] [PN:hypothetical protein MJ0359] [OR:Methanococcus jannaschii] [DB:pir2] [MP:REV327449–326805] >gp:[GI:g1591068] [LN:U67489] [AC:U67489:L77117] [PN:M. jannaschii predicted coding region MJ0359] [GN:MJ0359] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 31 of 150 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:2497] [RE:3141] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36457341_c2_593 2488 6260 135 44 81 0.019 Description pir:[LN:S75730] [AC:S75730:S50064] [PN:8-amino-7-oxononanoate synthase,:7-keto-8-aminopelargonic acid synthetase:protein slr0917:7-keto-8-aminopelargonic acid synthetase:protein slr0917] [GN:bioF] [CL:5-aminolevulinate synthase] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [EC:2.3.1.47] [DB:pir2] >gp:[GI:d1011116:g1673311] [LN:SYCSLLE] [AC:D64003:AB001339] [PN:7-keto-8-aminopelargonic acid synthetase] [GN:bioF] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 22/27, 2755703–2868766.] [NT:ORF_ID:slr0917] [LE:35986] [RE:37299] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_36522175_f1_69 2489 6261 1557 518 2240 3.2e−232 Description gp:[GI:g2565311] [LN:AF024571] [AC:AF024571] [PN:high affinity proline permease] [GN:putP] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus high affinity proline permease (putP) gene, complete cds.] [LE:339] [RE:1832] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_39077_f2_270 2490 6262 717 238 1223 1.9e−124 Description gp:[GI:g2981294] [LN:AF012132] [AC:AF012132] [PN:response regulator] [GN:agrA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis agr system including response regulator (agrA), histidine kinase (agrC), AgrD (agrD), AgrB (agrB) and deltatoxin (hld) genes, complete cds.] [NT:AgrA; similar to S. aureus and S. lugdunensis AgrA] [LE:242] [RE:958] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3939013_c2_573 2491 6263 210 69 109 2.1e−06 Description pir:[LN:C69807] [AC:C69807] [PN:hypothetical protein yfjT] [GN:yfjT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182787:g2633121] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfjT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:65959] [RE:66144] [DI:direct] >gp:[GI:d1024269:g2626812] [LN:D83967] [AC:D83967] [PN:YfjT] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 74 degree region.] [LE:1777] [RE:1962] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_3942015_c1_471 2492 6264 528 175 790 1.4e−78 Description sp:[LN:YLY1_STAAU] [AC:Q53719] [OR:STAPHYLOCOCCUS AUREUS] [DE:HYPOTHETICAL 18.6 KD PROTEIN IN LYTA 3′REGION (ORF1)] [SP:Q53719] [DB:swissprot] >gp:[GI:g310602] [LN:STAORFPHI] [AC:L19300] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (library: NCTC 8325) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA sequence encoding three ORFs, complete cds; prophage phi-11 sequence homology, 5′ flank.] [LE:1798] [RE:2313] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4021888_c3_615 2493 6265 669 222 83 0.0039 Description pir:[LN:D71114] [AC:D71114] [PN:hypothetical protein PH0683] [GN:PH0683] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030717:g3257091] [LN:AP000003] [AC:AP000003:AB009484:AB009485:AB009486:AB009487:AB009488:AB009489] [PN:107aa long hypothetical protein] [GN:PH0683] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 544001–777000 nt. position(3/7).] [LE:63024] [RE:63347] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4062500_c2_507 2494 6266 1401 466 502 3.3e−47 Description gp:[GI:e1314011:g3393011] [LN:SAA224764] [AC:AJ224764] [PN:Clumping factor B] [GN:clfB] [FN:binds fibrinogen] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus strain Newman clumping factor B (clfB) gene.] [LE:28] [RE:2769] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4072936_c1_453 2495 6267 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4093753_f3_387 2496 6268 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4095277_c3_627 2497 6269 1827 608 2760 2.5e−287 Description pir:[LN:S11783] [AC:S11783:S27371:S34445] [PN:bla regulator protein blaR1:probable beta-lactam receptor signal transducer protein] [GN:blaR1] [CL:mecR1 protein:beta-lactamase OXA2 homology] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g152966] [LN:STABLA] [AC:M62650] [GN:blaR1] [FN:putative beta-lactam receptor-signal] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus blaZ gene, 5′ end; blaR1 gene, complete cds; blaI gene, complete cds; and binR gene, 5′ end.] [LE:156] [RE:1913] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_409556_f1_10 2498 6270 135 44 112 2.5e−06 Description pir:[LN:D71245] [AC:D71245] [PN:hypothetical protein PH0221] [GN:PH0221] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030234:g3256608] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:235aa long hypothetical protein] [GN:PH0221] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:194212] [RE:194919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4101517_f1_100 2499 6271 1068 355 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4179637_c3_622 2500 6272 387 128 207 8.6e−17 Description sp:[LN:TRAC_STAAU] [AC:P06698] [GN:TNPC] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR TRANSPOSON TN554] [SP:P06698] [DB:swissprot] >pir:[LN:C24584] [AC:C24584] [PN:transposition regulatory protein tnpC] [GN:tnpC] [CL:transposition regulatory protein tnpC] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g43729] [LN:ISTN554] [AC:X03216:K02987] [PN:pot. tnpC protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus transposon Tn554.] [NT:(aa 1–125)] [SP:P06698] [LE:3115] [RE:3492] [DI:direct] >gp:[GI:d1046009:g5360833] [LN:D86934] [AC:D86934] [PN:transposaseC] [GN:tnpC] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N047] [LE:32364] [RE:32741] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_430325_c1_456 2501 6273 1383 460 649 1.3e−63 Description gp:[GI:g3820539] [LN:AF080002] [AC:AF080002] [PN:UDP-N-acetylmuramyl tripeptide synthetase MurC] [GN:murC] [OR:Heliobacillus mobilis] [DB:genpept-bct2] [DE:Heliobacillus mobilis exopolyphosphatase Ppx (ppx) gene, partial cds; cobyric acid synthase CobQ (cobQ), UDP-N-acetylmuramyltripeptide synthetase MurC (murC), glutamyl tRNA reductase HemA (hemA), photosynthesis gene cluster, complete sequence, stage IIsporulation protein E Sp2E (sp2E), cell cycle protein MesJ (mesJ), and ATP-dependent zinc metallopeptidase FtsH (ftsH) genes, complete cds; and nucleoside diphosphate kinase B NdkB (ndkB) gene, partial cds.] [LE:2000] [RE:3367] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4329635_f2_164 2502 6274 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4689130_f2_272 2503 6275 306 101 81 0.029 Description pir:[LN:A58932] [AC:A58932] [PN:cytochrome C-type biogenesis protein CCMF] [GN:yejR:ccmF] [OR:mitochondrion Cyanidioschyzon merolae] [DB:pir2] >gp:[GI:d1037513:g4115789] [LN:D89861] [AC:D89861] [PN:cytochrome C-type biogenesis protein CCMF] [GN:yejR or ccmF] [OR:Mitochondrion Cyanidioschyzon merolae] [SR:Cyanidioschyzon merolae (strain:10D) mitochondrion DNA] [DB:genpept-pln1] [DE:Cyanidioschyzon merolae mitochondrial DNA, complete sequence.] [LE:16296] [RE:18158] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4722265_c1_472 2504 6276 858 285 416 6.1e−39 Description pir:[LN:H69800] [AC:H69800] [PN:hypothetical protein yfhG] [GN:yfhG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182842:g2633176] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:122320] [RE:123114] [DI:direct] >gp:[GI:d1025389:g2804537] [LN:D85082] [AC:D85082] [PN:YfhG] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:15211] [RE:16005] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4726566_f2_189 2505 6277 582 193 187 3.8e−13 Description gp:[GI:g4981093] [LN:AE001732] [AC:AE001732:AE000512] [PN:DNA polymerase III, alpha subunit] [GN:TM0576] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 44 of 136 of the complete genome.] [NT:similar to GB:M22996 SP:P13267 GB:M33543 GB:S55653] [LE:5720] [RE:9823] [DI:direct] >gp:[GI:g3930535] [LN:AF065313] [AC:AF065313] [PN:DNA polymerase III] [GN:polC] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima DNA polymerase III (polC) gene, complete cds.] [NT:family C DNA polymerase] [LE:235] [RE:4338] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4728377_f2_171 2506 6278 1146 381 544 1.7e−52 Description pir:[LN:F69807] [AC:F69807] [PN:hypothetical protein yfkB] [GN:yfkB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182785:g2633119] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfkB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:64694] [RE:65155] [DI:complement] >gp:[GI:d1024271:g2626814] [LN:D83967] [AC:D83967] [PN:YfkB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 74 degree region.] [LE:2766] [RE:3227] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4876387_f3_376 2507 6279 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4881313_c1_475 2508 6280 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_4900443_c1_449 2509 6281 1440 479 2460 1.5e−255 Description sp:[LN:YZDD_BACSU] [AC:Q45486] [GN:YZDD] [OR:BACILLUS SUBTILIS] [DE:PET112-LIKE PROTEIN] [SP:Q45486] [DB:swissprot] >gp:[GI:g1354211] [LN:BSU49790] [AC:U49790] [PN:PET112-like protein] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis PET112-like protein gene, complete cds.] [LE:433] [RE:1860] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_5133500_f1_48 2510 6282 480 159 358 8.6e−33 Description pir:[LN:E69808] [AC:E69808] [PN:protein-tyrosine phosphatase homolog yfkJ] [GN:yfkJ] [CL:protein-tyrosine-phosphatase, low molecular weight] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182778:g2633112] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfkJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to protein-tyrosine phosphatase] [LE:58691] [RE:59161] [DI:direct] >gp:[GI:d1024279:g2626822] [LN:D83967] [AC:D83967] [PN:YfkJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 74 degree region.] [LE:8760] [RE:9230] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_5167268_c3_649 2511 6283 1080 359 613 8.2e−60 Description sp:[LN:DINP_ECOLI] [AC:Q47155:Q47683] [GN:DINP] [OR:ESCHERICHIA COLI] [DE:DNA-DAMAGE-INDUCIBLE PROTEIN P] [SP:Q47155:Q47683] [DB:swissprot] >pir:[LN:H64747] [AC:H64747] [PN:DNA-damage-inducible protein dinP] [GN:dinP] [CL:umuC protein] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1008174:g984587] [LN:ECODINJ] [AC:D38582] [PN:DinP] [OR:Escherichia coli] [SR:Escherichia coli (sub_strain W3110, strain K-12) (library: Kohara'] [DB:genpept-bct1] [DE:Escherichia coli genes for 'YafH, YafI, YafJ, YafK, YafQ, DinJ, YafL, YafM, FhiA, MbhA, DinP, YafN, YafO and YafP.] [NT:hypothetical; similarity to YLW6_CAEEL (P34409),] [LE:8540] [RE:9595] [DI:direct] >gp:[GI:d1041669:g4902967] [LN:ECOTSF] [AC:D83536] [PN:DNA-damage-inducible protein p.] [GN:dinP] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (4.1–6.1 min).] [NT:ORF_ID:o127#9; similar to PIR Accession Number] [LE:60446] [RE:61501] [DI:direct] >gp:[GI:g1552799] [LN:ECU70214] [AC:U70214] [PN:DinP] [GN:dinP] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli chromosome minutes 4–6.] [LE:81973] [RE:83028] [DI:direct] >gp:[GI:g1786425] [LN:AE000131] [AC:AE000131:U00096] [PN:damage-inducible protein P; putative tRNA] [GN:dinP] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 21 of 400 of the complete genome.] [NT:o351; 100 pct identical to GB: ECODINJ_11] [LE:7487] [RE:8542] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_5269400_f3_291 2512 6284 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_570327_c1_424 2513 6285 171 56 52 0.026 Description pir:[LN:S68156] [AC:S68156] [PN:NADH dehydrogenase (ubiquinone), chain 3] [GN:ND3] [CL:NADH dehydrogenase (ubiquinone) chain 3] [OR:mitochondrion Dictyostelium discoideum] [EC:1.6.5.3] [DB:pir2] >gp:[GI:d1041830:g4958885] [LN:AB000109] [AC:AB000109] [PN:NADH dehydrogenase subunit 3] [GN:nad3] [OR:Mitochondrion Dictyostelium discoideum] [SR:Dictyostelium discoideum (strain:AX3, partially X22 (48172–5151] [DB:genpept-inv1] [EC:1.6.5.3] [DE:Dictyostelium discoideum mitochondrial DNA, complete sequence.] [LE:24783] [RE:25145] [DI:direct] >gp:[GI:d1004450:g699592] [LN:DDID16466] [AC:D16466] [PN:NADH dehydrogenase subunit 3] [GN:nad3] [OR:Mitochondrion Dictyostelium discoideum] [SR:Dictyostelium discoideum (strain:AX3) mitochondrion DNA] [DB:genpept-inv1] [EC:1.6.5.3] [DE:Dictyostelium discoideum mitochondrial DNA.] [LE:7866] [RE:8228] [DI:direct] >gp:[GI:d1004450:g699592] [LN:DDID16466] [AC:D16466] [PN:NADH dehydrogenase subunit 3] [GN:nad3] [OR:Mitochondrion Dictyostelium discoideum] [SR:Dictyostelium discoideum (strain:AX3) mitochondrion DNA] [DB:genpept] [EC:1.6.5.3] [DE:Dictyostelium discoideum mitochondrial DNA.] [LE:7866] [RE:8228] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_5860052_f3_388 2514 6286 435 144 107 3.4e−06 Description pir:[LN:H71190] [AC:H71190] [PN:hypothetical protein PH1800] [GN:PH1800] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031862:g3258236] [LN:AP000007] [AC:AP000007:AB009464:AB009465:AB009521:AB009522:AB009523:AB009524] [PN:133aa long hypothetical protein] [GN:PH1800] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1485001–1738505 nt. position(7/7).] [LE:80658] [RE:81059] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_5913882_f2_167 2515 6287 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_6053308_c2_538 2516 6288 903 300 815 3.2e−81 Description sp:[LN:NADE_ECOLI] [AC:P18843:P78235] [GN:NADE:EFG:NTRL] [OR:ESCHERICHIA COLI] [EC:6.3.5.1] [DE:PROTEIN)] [SP:P18843:P78235] [DB:swissprot] >pir:[LN:D64933] [AC:D64933:A26928] [PN:NAD+ synthase (glutamine-hydrolyzing),:nitrogen-regulatory protein] [GN:nadE] [CL:spore outgrowth factor B] [OR:Escherichia coli] [EC:6.3.5.1] [DB:pir2] [MP:34–39 min] >gp:[GI:d1016252:g1742846] [LN:D90817] [AC:D90817:AB001340] [PN:NH(3)-dependent NAD(+) synthetase (EC 6.3.5.1)] [GN:nadE, efg, ntrL_] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #326(39.1–39.4 min.).] [NT:ORF_ID:o326#9; similar to [SwissProt Accession] [LE:7818] [RE:8645] DI:direct] >gp:[GI:d1016258:g1742853] [LN:D90818] [AC:D90818:AB001340] [PN:NH(3)-dependent NAD(+) synthetase (EC 6.3.5.1)] [GN:nadE, efg, ntrL_] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #327(39.2–39.5 min.).] [NT:ORF_ID:o326#9; similar to [SwissProt Accession] [LE:2186] [RE:3013] [DI:direct] >gp:[GI:g1788036] [LN:AE000269] [AC:AE000269:U00096] [PN:NAD synthetase, prefers NH3 over glutamine] [GN:nadE] [FN:enzyme; Biosynthesis of cofactors, carriers:] [OR:Escherichia coli] [DB:genpept-bct2] [EC:6.3.5.1] [DE:Escherichia coli K-12 MG1655 section 159 of 400 of the complete genome.] [NT:o275; residues 32–274 are 100 pct identical to] [LE:1232] [RE:2059] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_6147252_c1_473 2517 6289 846 281 150 1.6e−08 Description sp:[LN:TAGG_BACSU] [AC:P42953] [GN:TAGG] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID TRANSLOCATION PERMEASE PROTEIN TAGG] [SP:P42953] [DB:swissprot] >pir:[LN:S69202] [AC:S69202:H69720] [PN:teichoic acid permease tagG:integral membrane protein tagG] [GN:tagG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g755152] [LN:BSU13832] [AC:U13832] [PN:highly hydrophobic integral membrane protein] [GN:tagG] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 highly hydrophobic integral membrane protein(tagG) gene and ATP-binding protein (tagH) gene, complete cds.] [LE:287] [RE:1114] [DI:direct] >gp:[GI:e1184477:g2636097] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:permease] [GN:tagG] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P42953] [LE:77137] [RE:77964] [DI:complement] >gp:[GI:e1184477:g2636097] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:permease] [GN:tagG] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P42953] [LE:77137] [RE:77964] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_632661_c2_560 2518 6290 777 258 490 8.8e−47 Description gp:[GI:g3820538] [LN:AF080002] [AC:AF080002] [PN:cobyric acid synthase CobQ] [GN:cobQ] [OR:Heliobacillus mobilis] [DB:genpept-bct2] [DE:Heliobacillus mobilis exopolyphosphatase Ppx (ppx) gene, partial cds; cobyric acid synthase CobQ (cobQ), UDP-N-acetylmuramyltripeptide synthetase MurC (murC), glutamyl tRNA reductase HemA (hemA), photosynthesis gene cluster, complete sequence, stage IIsporulation protein E Sp2E (sp2E), cell cycle protein MesJ (mesJ), and ATP-dependent zinc metallopeptidase FtsH (ftsH) genes, complete cds; and nucleoside diphosphate kinase B NdkB (ndkB) gene, partial cds.] [LE:1238] [RE:1996] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_6682627_c3_604 2519 6291 357 118 123 6.9e−08 Description gp:[GI:g624123] [LN:PBU42580] [AC:U42580:U17055:U32570] [GN:a58L] [OR:Paramecium bursaria Chlorella virus 1] [DB:genpept-vrl] [DE:Paramecium bursaria Chlorella virus 1, complete genome.] [NT:contains Glu-, Gln-rich regions: QVQVV (11X), KEVWE] [LE:31140] [RE:31628] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_6829687_c2_512 2520 6292 618 205 355 1.8e−32 Description pir:[LN:S42925] [AC:S42925] [PN:probable transport protein] [CL:ATP-binding cassette homology] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g459256] [LN:SASTPSMP] [AC:Z30588] [PN:Potential ABC transporter] [GN:stpC] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus (RN4220) genes for potential ABC transporter and potential membrane spanning protein.] [LE:199] [RE:894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_6931261_c1_409 2521 6293 537 178 128 2.0e−08 Description gp:[GI:g2689551] [LN:U93688] [AC:U93688] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst), enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:orf4] [LE:3868] [RE:4395] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_7164087_c2_575 2522 6294 333 110 217 7.5e−18 Description pir:[LN:A69801] [AC:A69801] [PN:hypothetical protein yfhH] [GN:yfhH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182843:g2633177] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [LE:123116] [RE:123430] [DI:direct] >gp:[GI:d1025390:g2804538] [LN:D85082] [AC:D85082] [PN:YfhH] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:16007] [RE:16321] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_7207518_f2_267 2523 6295 375 124 151 7.4e−11 Description pir:[LN:B27059] [AC:B27059] [PN:hypothetical protein 2] [OR:Glycine max] [SR:, soybean] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_789010_c3_620 2524 6296 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_799188_f1_118 2525 6297 468 155 252 9.8e−20 Description gp:[GI:g3929312] [LN:AF100426] [AC:AF100426] [PN:fimbriae-associated protein Fap1] [GN:fap1] [OR:Streptococcus parasanguinis] [DB:genpept-bct2] [DE:Streptococcus parasanguis fimbriae-associated protein Fap1 (fap1) gene, complete cds.] [NT:involved in fimbriae assembly and fimbriae-mediated] [LE:284] [RE:7996] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_815903_c1_423 2526 6298 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_820325_f2_156 2527 6299 948 315 1131 1.1e−114 Description sp:[LN:GSAB_BACSU] [AC:P71084] [GN:GSAB] [OR:BACILLUS SUBTILIS] [EC:5.4.3.8] [DE:(GLUTAMATE-1-SEMIALDEHYDE AMINOTRANSFERASE) (GSA-AT)] [SP:P71084] [DB:swissprot] >gp:[GI:e281581:g1673394] [LN:BSZ82044] [AC:Z82044] [PN:glutamate-1-semialdehyde aminotransferase] [GN:gsaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 25 kb genomic DNA segment (from sspE to katA).] [SP:P71084] [LE:5984] [RE:7273] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_860677_f1_3 2528 6300 177 58 72 0.017 Description gp:[GI:g3845668] [LN:AF021254] [AC:AF021254] [PN:unknown] [GN:RTL5] [OR:avian adenovirus type 8] [DB:genpept-vrl] [DE:Avian adenovirus type 8 strain ATCC A-2A 100 K protein homolog gene, partial cds; RTL10, RTR1, late 33 K protein homolog, pVIII homolog, RTL9, RTR2, fibre homolog, RTL8, RTL7, RTL6, RTL5, and RTR3 genes, complete cds; and RTL4 gene, partial cds.] [LE:8905] [RE:9216] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_885756_c3_662 2529 6301 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_979712_c1_430 2530 6302 1422 473 111 0.023 Description pir:[LN:C71610] [AC:C71610] [PN:probable membrane associated protein PFB0615c] [GN:PFB0615c] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845231] [LN:AE001406] [AC:AE001406:AE001362] [PN:predicted membrane associated protein] [GN:PFB0615c] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 43 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:1921:2496:6961] [RE:2310:6749:8358] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_985678_c3_646 2531 6303 975 324 889 4.6e−89 Description pir:[LN:F69795] [AC:F69795] [PN:conserved hypothetical protein yerQ] [GN:yerQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182652:g2632986] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to hypothetical proteins] [LE:135242] [RE:136153] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000994_9859433_c2_561 2532 6304 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_10580443_c1_140 2533 6305 237 78 246 6.4e−21 Description sp:[LN:YEED_ECOLI] [AC:P33014] [GN:YEED] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 8.1 KD PROTEIN IN SBCB-HISL INTERGENIC REGION] [SP:P33014] [DB:swissprot] >pir:[LN:C64966] [AC:C64966] [PN:yeeD protein] [GN:yeeD] [CL:conserved hypothetical protein HI0721] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1016564:g1736686] [LN:D90839] [AC:D90839:AB001340] [GN:yeeD] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #349(44.6–45.0 min.).] [NT:ORF_ID:o349#3; similar to [SwissProt Accession] [LE:12878] [RE:13105] [DI:complement] >gp:[GI:d1016569:g1736692] [LN:D90840] [AC:D90840:AB001340] [GN:yeeD] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #350(44.9–45.2 min.).] [NT:ORF_ID:o349#3; similar to [SwissProt Accession] [LE:1569] [RE:1796] [DI:complement] >gp:[GI:g405955] [LN:ECOHU43] [AC:U00009] [PN:yeeD] [OR:Escherichia coli] [SR:Escherichia coli K12 BHB2600] [DB:genpept-bct1] [DE:sbcB region of E. coli K12 BHB2600.] [NT:similar to ORF in fliE-amyA intergenic region] [LE:4083] [RE:4310] [DI:complement] >gp:[GI:g1788322] [LN:AE000292] [AC:AE000292:U00096] [PN:orf, hypothetical protein] [GN:yeeD] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 182 of 400 of the complete genome.] [NT:f75; 100 pct identical to YEED_ECOLI SW: P33014] [LE:9541] [RE:9768] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_12142768_f1_32 2534 6306 300 99 110 4.2e−06 Description pir:[LN:D71245] [AC:D71245] [PN:hypothetical protein PH0221] [GN:PH0221] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030234:g3256608] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:235aa long hypothetical protein] [GN:PH0221] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:194212] [RE:194919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_13907566_c1_148 2535 6307 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_14493812_c1_131 2536 6308 465 154 289 1.8e−25 Description pir:[LN:C69786] [AC:C69786] [PN:conserved hypothetical protein ydiB] [GN:ydiB] [CL:hypothetical protein HI0065] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182570:g2632904] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to hypothetical proteins] [LE:40670] [RE:41146] [DI:direct] >gp:[GI:d1020494:g1945107] [LN:D88802] [AC:D88802] [GN:ydiB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:E. coli hypothetical protein; P31805 (267)] [LE:27672] [RE:28148] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_1461637_f2_60 2537 6309 249 82 123 6.9e−08 Description sp:[LN:ILVN_BACSU] [AC:P37252] [GN:ILVN] [OR:BACILLUS SUBTILIS] [EC:4.1.3.18] [DE:(ACETOHYDROXY-ACID SYNTHASE SMALL SUBUNIT) (ALS)] [SP:P37252] [DB:swissprot] >pir:[LN:E69644] [AC:E69644] [PN:acetolactate synthase (small subunit) ilvN] [GN:ilvN] [CL:acetolactate synthase small chain] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143092] [LN:BACILNB] [AC:L03181] [PN:acetolactate synthase small subunit] [GN:ilvN] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis ilvB, ilvN and ilvC genes, complete ilv-leuoperon.] [LE:2438] [RE:2962] [DI:direct] >gp:[GI:e1184079:g2635295] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:acetolactate synthase (acetohydroxy-acid] [GN:ilvN] [FN:valine/isoleucine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.3.18] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P37252] [LE:98696] [RE:99220] [DI:complement] >gp:[GI:e1165365:g1770067] [LN:BSZ75208] [AC:Z75208] [PN:acetolactate synthase small subunit] [GN:ilvN] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.3.18] [DE:B. subtilis genomic sequence 89009 bp.] [NT:acetolactate synthase (acetohydroxy-acid synthase)] [SP:P37252] [LE:70687] [RE:71211] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_14849093_c3_180 2538 6310 294 97 133 6.0e−09 Description pir:[LN:F71245] [AC:F71245] [PN:hypothetical protein PHS004] [GN:PHS004] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030236:g3256610] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:58aa long hypothetical protein] [GN:PHS004] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [NT:similar to GENPEPT:Z47547 percent identity:50.000] [LE:195255] [RE:195431] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_14897837_f1_29 2539 6311 1275 424 1161 4.3e−128 Description sp:[LN:THD1_LACLA] [AC:Q02145] [GN:ILVA] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.2.1.16] [DE:DEAMINASE)] [SP:Q02145] [DB:swissprot] >pir:[LN:S35141] [AC:S35141] [PN:probable threonine dehydratase,] [GN:ilvA] [CL:threonine dehydratase] [OR:Lactococcus lactis subsp. lactis] [EC:4.2.1.16] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_157802_c1_135 2540 6312 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_1702_f2_36 2541 6313 522 173 88 0.0089 Description pir:[LN:T00168] [AC:T00168] [PN:hypothetical protein 33] [OR:Staphylococcus aureus phage phi PVL] [DB:pir3] >gp:[GI:d1032869:g3341942] [LN:AB009866] [AC:AB009866] [OR:bacteriophage phi PVL] [SR:bacteriophage phi PVL (specific_host:Staphylococcus aureus ATC] [DB:genpept-phg] [DE:Bacteriophage phi PVL proviral DNA, complete sequence.] [NT:orf 33] [LE:28172] [RE:28582] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_19564128_c2_172 2542 6314 315 104 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_20422318_f3_73 2543 6315 417 138 105 2.2e−05 Description pir:[LN:D69633] [AC:D69633] [PN:glutamine ABC transporter (glutamine-binding protein) glnH] [GN:glnH] [CL:lysine-arginine-ornithine-binding protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183973:g2635189] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:glutamine ABC transporter (glutamine-binding] [GN:glnH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [LE:202928] [RE:203749] [DI:direct] >gp:[GI:e1183991:g2635207] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:glutamine ABC transporter (glutamine-binding] [GN:glnH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:7248] [RE:8069] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_2114077_c2_166 2544 6316 156 51 115 1.1e−06 Description pir:[LN:D69786] [AC:D69786] [PN:glycoprotein endopeptidase homolog ydiC] [GN:ydiC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182571:g2632905] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to glycoprotein endopeptidase] [LE:41127] [RE:41816] [DI:direct] >gp:[GI:d1020495:g1945108] [LN:D88802] [AC:D88802] [GN:ydiC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:H. influenzae hypothetical protein; P43990 (182)] [LE:28129] [RE:28818] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_2125637_f3_111 2545 6317 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_22441907_f2_58 2546 6318 1869 622 1924 9.7e−199 Description sp:[LN:ILVD_BACSU] [AC:P51785] [GN:ILVD] [OR:BACILLUS SUBTILIS] [EC:4.2.1.9] [DE:110) (VEG110)] [SP:P51785] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_22766502_f1_18 2547 6319 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_23478463_f3_99 2548 6320 1755 584 1667 1.7e−171 Description pir:[LN:B69644] [AC:B69644:I39865] [PN:acetolactate synthase, large chain] [GN:ilvB] [CL:acetolactate synthase large chain:thiamine pyrophosphate-binding domain homology] [OR:Bacillus subtilis] [EC:4.1.3.18] [DB:pir2] >gp:[GI:e1184080:g2635296] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:acetolactate synthase (acetohydroxy-acid] [GN:ilvB] [FN:valine/isoleucine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.3.18] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [LE:99217] [RE:100941] [DI:complement] >gp:[GI:e1165364:g1770066] [LN:BSZ75208] [AC:Z75208] [PN:acetolactate synthase large subunit] [GN:ilvB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.1.3.18] [DE:B. subtilis genomic sequence 89009 bp.] [NT:acetolactate synthase (acetohydroxy-acid synthase)] [LE:68966] [RE:70690] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_23867325_f2_64 2549 6321 570 189 561 2.6e−54 Description sp:[LN:LEUD_LACLA] [AC:Q02144] [GN:LEUD] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.2.1.33] [DE:(ISOPROPYLMALATE ISOMERASE) (ALPHA-IPM ISOMERASE)] [SP:Q02144] [DB:swissprot] >pir:[LN:E36889] [AC:E36889:S35135] [PN:probable 3-isopropylmalate dehydratase, chain leuD] [GN:leuD] [CL:3-isopropylmalate dehydratase small chain] [OR:Lactococcus lactis subsp. lactis] [EC:4.2.1.33] [DB:pir2] >gp:[GI:g2565154] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:LeuD] [GN:leuD] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC) , unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:isopropylmalate dehydratase subunit] [LE:16590] [RE:17165] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_24343813_c1_139 2550 6322 1119 372 1075 9.0e−109 Description sp:[LN:YEEE_ECOLI] [AC:P33015] [GN:YEEE] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 38.1 KD PROTEIN IN SBCB-HISL INTERGENIC REGION] [SP:P33015] [DB:swissprot] >pir:[LN:D64966] [AC:D64966] [PN:membrane protein yeeE] [GN:yeeE] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1016565:g1736687] [LN:D90839] [AC:D90839:AB001340] [GN:yeeE] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #349(44.6–45.0 min.).] [NT:ORF_ID:o349#4; similar to [SwissProt Accession] [LE:13119] [RE:14177] [DI:complement] >gp:[GI:d1016570:g1736693] [LN:D90840] [AC:D90840:AB001340] [GN:yeeE] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E. coli genomic DNA, Kohara clone #350(44.9–45.2 min.).] [NT:ORF_ID:o349#4; similar to [SwissProt Accession] [LE:1810] [RE:2868] [DI:complement] >gp:[GI:g405956] [LN:ECOHU43] [AC:U00009] [PN:yeeE] [OR:Escherichia coli] [SR:Escherichia coli K12 BHB2600] [DB:genpept-bct1] [DE:sbcB region of E. coli K12 BHB2600.] [NT:similar to ORF in fliE-amyA intergenic region] [LE:4324] [RE:5382] [DI:complement] >gp:[GI:g1788323] [LN:AE000292] [AC:AE000292:U00096] [PN:putative transport system permease protein] [GN:yeeE] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 182 of 400 of the complete genome.] [NT:f352; 100 pct identical to YEEE_ECOLI SW: P33015] [LE:9782] [RE:10840] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_24640625_c2_175 2551 6323 960 319 954 6.0e−96 Description sp:[LN:SCRR_STAXY] [AC:P74892] [GN:SCRR] [OR:STAPHYLOCOCCUS XYLOSUS] [DE:SUCROSE OPERON REPRESSOR (SCR OPERON REGULATORY PROTEIN)] [SP:P74892] [DB:swissprot] >gp:[GI:e264641:g949974] [LN:SXSCRBA] [AC:X67744] [PN:sucrose repressor] [GN:scrR] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S. xylosus scrB and scrR genes.] [SP:P74892] [LE:495] [RE:1457] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_24646962_c1_150 2552 6324 210 69 79 0.0032 Description gp:[GI:g2564351] [LN:VCU83795] [AC:U83795] [PN:RstR] [GN:rstR] [FN:repressor of rstA transcription] [OR:Vibrio cholerae] [DB:genpept-bct1] [DE:Vibrio cholerae RstR (rstR), RstA1 (rstA1), RstB1 (rstB1) and RstC (rstC) genes, complete cds.] [LE:496] [RE:834] [DI:complement] >gp:[GI:g2564356] [LN:VCU83796] [AC:U83796] [PN:RstR] [GN:rstR] [FN:repressor of rstA transcription] [OR:Vibrio cholerae] [DB:genpept-bct1] [DE:Vibrio cholerae RstR (rstR), RstA2 (rstA2), and RstB2 (rstB2) genes, complete cds.] [LE:496] [RE:834] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_24814812_f3_90 2553 6325 1950 649 1516 1.7e−155 Description sp:[LN:YDIF_BACSU] [AC:O05519] [GN:YDIF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDIF] [SP:O05519] [DB:swissprot] >pir:[LN:G69786] [AC:G69786] [PN:ABC transporter (ATP-binding protein) homolog ydiF] [GN:ydiF] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182574:g2632908] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to ABC transporter (ATP-binding protein)] [SP:O05519] [LE:43544] [RE:45472] [DI:complement] >gp:[GI:d1020498:g1945111] [LN:D88802] [AC:D88802] [GN:ydiF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:H. influenzae hypothetical ABC transporter; P44808] [LE:30546] [RE:32474] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_24823588_f2_63 2554 6326 1386 461 1633 6.7e−168 Description sp:[LN:LEU2_LACLA] [AC:Q02142] [GN:LEUC] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.2.1.33] [DE:(ISOPROPYLMALATE ISOMERASE) (ALPHA-IPM ISOMERASE) (IPMI)] [SP:Q02142] [DB:swissprot] >pir:[LN:S35134] [AC:S35134] [PN:probable 3-isopropylmalate dehydratase, chain leuC] [GN:leuC] [OR:Lactococcus lactis subsp. lactis] [SR:strain NCDO2118, , strain NCDO2118] [SR:strain NCDO2118,] [EC:4.2.1.33] [DB:pir2] >gp:[GI:g2565153] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:LeuC] [GN:leuC] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:isopropylmalate dehydratase subunit] [LE:15188] [RE:16570] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_25900300_c3_212 2555 6327 330 110 297 2.5e−26 Description gp:[GI:g2689561] [LN:U93688] [AC:U93688] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst), enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:orf14] [LE:10769] [RE:11029] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_26615912_c3_206 2556 6328 1479 492 1943 9.5e−201 Description sp:[LN:SCRB_STAXY] [AC:Q05936] [GN:SCRB] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:3.2.1.26] [DE:SUCROSE-6-PHOSPHATE HYDROLASE, (SUCRASE) (INVERTASE)] [SP:Q05936] [DB:swissprot] >pir:[LN:A47059] [AC:A47059] [PN:sucrase ScrB] [OR:Staphylococcus xylosus] [DB:pir2] >gp:[GI:e264653:g288269] [LN:SXSCRBA] [AC:X67744] [PN:beta-fructofuranosidase] [GN:scrB] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [EC:3.2.1.26] [DE:S. xylosus scrB and scrR genes.] [SP:Q05936] [LE:1541] [RE:3025] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_2866090_f2_35 2557 6329 1254 417 1250 2.6e−127 Description gp:[GI:g2689564] [LN:U93688] [AC:U93688] [PN:integrase] [GN:int] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst), enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:similar to staphylococcal phage integrase] [LE:13871] [RE:15091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_29307312_c3_181 2558 6330 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_31436_f1_15 2559 6331 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_31680342_f3_74 2560 6332 546 181 176 4.6e−12 Description gp:[GI:g1633572] [LN:KSU52064] [AC:U52064] [OR:Kaposi's sarcoma-associated herpesvirus] [SR:Kaposi's sarcoma-associated herpesvirus - Human herpesvirus 8] [DB:genpept-vrl] [DE:Kaposi's sarcoma-associated herpes-like virus ORF73 homolog gene, complete cds.] [NT:Herpesvirus saimiri ORF73 homolog] [LE:1] [RE:3489] [DI:direct] >gp:[GI:g1718329] [LN:KSU75698] [AC:U75698] [OR:Kaposi's sarcoma-associated herpesvirus] [SR:Kaposi's sarcoma-associated herpesvirus - Human herpesvirus 8] [DB:genpept-vrl] [DE:Kaposi's sarcoma-associated herpesvirus long unique region, 80 putative ORF's and kaposin gene, complete cds.] [NT:ORF 73; extensive acidic domains, potential leucine] [LE:123809] [RE:127297] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_33203138_c1_133 2561 6333 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_3361326_c2_151 2562 6334 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_34257878_f2_62 2563 6335 1065 354 894 1.4e−89 Description sp:[LN:LEU3_LACLA] [AC:Q02143] [GN:LEUB] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:1.1.1.85] [DE:(IMDH) (3-IPM-DH)] [SP:Q02143] [DB:swissprot] >pir:[LN:S35133] [AC:S35133:C36889] [PN:3-isopropylmalate dehydrogenase,] [GN:leuB] [CL:3-isopropylmalate dehydrogenase] [OR:Lactococcus lactis subsp. lactis] [SR:strain NCDO2118, , strain NCDO2118] [SR:strain NCDO2118,] [EC:1.1.1.85] [DB:pir2] >gp:[GI:g2565152] [LN:LLU92974] [AC:U92974:M90760:M90761] [PN:LeuB] [GN:leuB] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis unknown gene, partial cds, and HisC (hisC), unknown, HisG (hisG), unknown, HisB (hisB), unknown, HisH (hish), HisA (hisA), HisF (hisF), HisIE (hisIE), unknown, unknown, LeuA (leuA), LeuB (leuB), LeuC (leuC), LeuD (leuD), unknown, IlvD (ilvD), IlvB (ilvB), IlvN, IlvC (ilvC), IlvA (ilvA), AldB (aldB) and aldR (aldR) genes, complete cds.] [NT:isopropylmalate dehydrogenase] [LE:13788] [RE:14825] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_34412750_c3_207 2564 6336 966 321 1031 4.2e−104 Description pir:[LN:S20799] [AC:S58482:S20799] [PN:hypothetical protein 7] [CL:ribokinase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46512] [LN:SAAGRAB] [AC:X52543:M32737] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus agrA, agrB and hld genes.] [NT:orf 7] [LE:4896] [RE:5855] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_35598750_f3_72 2565 6337 849 282 112 3.9e−06 Description gp:[GI:g2897106] [LN:AF020798] [AC:AF020798] [PN:repressor] [OR:Streptococcus thermophilus bacteriophage TP-J34] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage lysogeny module, integrase homolog (int), putative host cell surface-exposed lipoprotein, putative metallo-proteinase, repressor, Cro-like regulatory protein, and P1-antirepressor homolog genes, complete cds.] [NT:CI-like regulatory protein; orf121] [LE:4825] [RE:5190] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_36132937_f2_53 2566 6338 1641 546 273 9.6e−20 Description sp:[LN:HEXA_STRPN] [AC:P10564] [GN:HEXA] [OR:STREPTOCOCCUS PNEUMONIAE] [DE:DNA MISMATCH REPAIR PROTEIN HEXA] [SP:P10564] [DB:swissprot] >pir:[LN:C28667] [AC:C28667] [PN:DNA mismatch repair protein hexA] [GN:hexA] [CL:DNA mismatch repair protein mutS] [OR:Streptococcus pneumoniae] [DB:pir2] >gp:[GI:g153655] [LN:STRHEXA] [AC:M18729] [PN:mismatch repair protein] [GN:hexA] [OR:Streptococcus pneumoniae] [SR:Streptococcus pneumoniae (strain 175) (clone: pLS141.) DNA] [DB:genpept-bct1] [DE:S. pneumoniae mismatch repair protein (hexA) gene, complete cds.] [LE:971] [RE:3505] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_36206502_c3_197 2567 6339 483 160 340 7.0e−31 Description pir:[LN:E69786] [AC:E69786] [PN:ribosomal-protein-alanine N-acetyltransfer homolog ydiD] [GN:ydiD] [CL:Escherichia coli peptide N-acetyltransferase rimI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182572:g2632906] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to ribosomal-protein-alanine] [LE:41826] [RE:42281] [DI:direct] >gp:[GI:d1020496:g1945109] [LN:D88802] [AC:D88802] [GN:ydiD] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:H. influenzae, ribosomal protein alanine] [LE:28828] [RE:29283] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_409556_f1_33 2568 6340 135 44 112 2.5e−06 Description pir:[LN:D71245] [AC:D71245] [PN:hypothetical protein PH0221] [GN:PH0221] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030234:g3256608] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:235aa long hypothetical protein] [GN:PH0221] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:194212] [RE:194919] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_4707506_c2_174 2569 6341 1314 437 1156 2.4e−117 Description sp:[LN:NRGA_BACSU] [AC:Q07429] [GN:NRGA] [OR:BACILLUS SUBTILIS] [DE:PROBABLE AMMONIUM TRANSPORTER (MEMBRANE PROTEIN NRGA)] [SP:Q07429] [DB:swissprot] >pir:[LN:A36865] [AC:A36865:D69667] [PN:ammonium transporter nrgA] [GN:nrgA] [CL:ammonium transporter nrgA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143264] [LN:BACNRGABO] [AC:L03216] [PN:membrane-associated protein] [GN:nrgA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis operon membrane-associated protein (nrgA), and PII-like protein (nrgB) genes, complete cds.] [NT:putative] [LE:126] [RE:1340] [DI:direct] >gp:[GI:e1184557:g2636176] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ammonium transporter] [GN:nrgA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:Q07429] [LE:158754] [RE:159968] [DI:direct] >gp:[GI:e283112:g1684645] [LN:BSZ82987] [AC:Z82987] [PN:unknown] [GN:nrgA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ywo[A,B,C,D,E,F,G,H], nrg[A,B], spoIIID and mb1 genes.] [SP:Q07429] [LE:1335] [RE:2549] [DI:complement] >gp:[GI:e1184557:g2636176] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ammonium transporter] [GN:nrgA] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:Q07429] [LE:158754] [RE:159968] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_4958387_c1_132 2570 6342 537 178 305 3.6e−27 Description pir:[LN:D69786] [AC:D69786] [PN:glycoprotein endopeptidase homolog ydiC] [GN:ydiC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182571:g2632905] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to glycoprotein endopeptidase] [LE:41127] [RE:41816] [DI:direct] >gp:[GI:d1020495:g1945108] [LN:D88802] [AC:D88802] [GN:ydiC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:H. influenzae hypothetical protein; P43990 (182)] [LE:28129] [RE:28818] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_5359438_c2_167 2571 6343 1107 368 1096 5.4e−111 Description sp:[LN:YDIE_BACSU] [AC:005518] [GN:YDIE] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 36.8 KD PROTEIN IN PHOB-GROES INTERGENIC REGION] [SP:O05518] [DB:swissprot] >pir:[LN:F69786] [AC:F69786] [PN:glycoprotein endopeptidase homolog ydiE] [GN:ydiE] [CL:O-sialoglycoprotein endopeptidase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182573:g2632907] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydiE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to glycoprotein endopeptidase] [SP:O05518] [LE:42274] [RE:43314] [DI:direct] >gp:[GI:d1020497:g1945110] [LN:D88802] [AC:D88802] [GN:ydiE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:P. haemolytica o-sialoglycoprotein endopeptidase;] [LE:29276] [RE:30316] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_5909428_c3_203 2572 6344 750 249 582 1.6e−56 Description gp:[GI:d1039124:g4514349] [LN:AB013375] [AC:AB013375] [PN:YdiH] [GN:ydiH] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 ydiH, ydiI, ydij, yhcA and yxaA genes, complete and partial cds.] [LE:235] [RE:870] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_6836010_c2_153 2573 6345 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_860790_f3_101 2574 6346 1593 530 1391 3.0e−142 Description sp:[LN:LEU1_LACLA] [AC:Q02141] [GN:LEUA] [OR:LACTOCOCCUS LACTIS] [SR:,SUBSPLACTIS:STREPTOCOCCUS LACTIS] [EC:4.1.3.12] [DE:SYNTHASE) (ALPHA-IPM SYNTHETASE)] [SP:Q02141] [DB:swissprot] >pir:[LN:S35132] [AC:S35132:B36889] [PN:2-isopropylmalate synthase,:alpha-isopropylmalate synthase] [GN:leuA] [CL:2-isopropylmalate synthase leuA] [OR:Lactococcus lactis subsp. lactis] [EC:4.1.3.12] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_9843800_f1_8 2575 6347 192 63 47 0.020 Description gp:[GI:e236301:g1263146] [LN:MTMCECYTB] [AC:Z70776] [PN:cytochrome b] [OR:Mitochondrion Mugil cephalus] [SR:Mugil cephalus] [DB:genpept-vrt] [DE:M. cephalus mitochondrial cytochrome b gene.] [LE:<1] [RE:>292] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000995_995451_f2_61 2576 6348 1020 339 1139 1.5e−115 Description sp:[LN:ILVC_BACSU] [AC:P37253] [GN:ILVC] [OR:BACILLUS SUBTILIS] [EC:1.1.1.86] [DE:ISOMEROREDUCTASE) (ALPHA-KETO-BETA-HYDROXYLACIL REDUCTOISOMERASE)] [SP:P37253] [DB:swissprot] >pir:[LN:C69644] [AC:C69644] [PN:ketol-acid reductoisomerase ilvC] [GN:ilvC] [CL:Methanococcus ketol-acid reductoisomerase: ketol-acid reductoisomerase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143093] [LN:BACILNB] [AC:L03181] [PN:ketol-acid reductoisomerase] [GN:ilvC] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis ilvB, ilvN and ilvC genes, complete ilv-leuoperon.] [LE:2979] [RE:4007] [DI:direct] >gp:[GI:e1184078:g2635294] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:ketol-acid reductoisomerase (acetohydroxy-acid] [GN:ilvC] [FN:valine/isoleucine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.86] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131 to 3013540.] [SP:P37253] [LE:97651] [RE:98679] [DI:complement] >gp:[GI:e1165366:g1770068] [LN:BSZ75208] [AC:Z75208] [PN:ketol-acid reductoisomerase] [GN:ilvC] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.86] [DE:B. subtilis genomic sequence 89009 bp.] [NT:ketol-acid reductoisomerase (acetohydroxy-acid] [SP:P37253] [LE:71228] [RE:72256] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_10719452_c3_376 2577 6349 684 227 371 3.6e−34 Description sp:[LN:HLY3_BACSU] [AC:P54175] [GN:YPLQ] [OR:BACILLUS SUBTILIS] [DE:HEMOLYSIN III HOMOLOG] [SP:P54175] [DB:swissprot] >pir:[LN:D69938] [AC:D69938] [PN:hemolysin III homolog homolog yplQ] [GN:yplQ] [CL:hemolysin III yplQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256643] [LN:BACYACA] [AC:L77246] [GN:yplQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:20.2% identity with NADH dehydrogenase of the] [LE:25508] [RE:26149] [DI:complement] >gp:[GI:e1183626:g2634599] [LN:BSUB0012] [AC:Z99115:AL009126] [GN:yplQ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:similar to hemolysin III homolog] [SP:P54175] [LE:99003] [RE:99644] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_10734567_f3_197 2578 6350 249 82 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_10752342_c2_327 2579 6351 981 326 773 9.1e−77 Description pir:[LN:D69812] [AC:D69812] [PN:ferrichrome ABC transporter (permease) homolog yfmE] [GN:yfmE] [CL:vitamin B12 transport protein btuC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182740:g2633074] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfmE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to ferrichrome ABC transporter (permease)] [LE:20404] [RE:21405] [DI:complement] >gp:[GI:d1023182:g2443248] [LN:D86417] [AC:D86417] [PN:YfmE] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:27116] [RE:28117] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_10759818_c1_271 2580 6352 1008 335 669 9.5e−66 Description pir:[LN:B69812] [AC:B69812] [PN:ferrichrome ABC transporter (binding prote) homolog yfmC] [GN:yfmC] [CL:iron(III) dicitrate transport protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182742:g2633076] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfmC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to ferrichrome ABC transporter (binding] [LE:22475] [RE:23422] [DI:complement] >gp:[GI:d1023180:g2443246] [LN:D86417] [AC:D86417] [PN:YfmC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:25099] [RE:26046] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_11913877_f1_49 2581 6353 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_11961568_c2_311 2582 6354 945 314 1007 1.5e−101 Description sp:[LN:LACC_STAAU] [AC:P11099] [GN:LACC] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.1.144] [DE:TAGATOSE-6-PHOSPHATE KINASE, (PHOSPHOTAGATOKINASE)] [SP:P11099] [DB:swissprot] >pir:[LN:S04358] [AC:S04358] [PN:lacC protein] [GN:lacC] [CL:6-phosphofructokinase 2] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46605] [LN:SALACCD] [AC:X14827] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus lacC and lacD genes.] [NT:lacC polypeptide (AA 1–310)] [SP:P11099] [LE:55] [RE:987] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_12578885_f2_109 2583 6355 366 121 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_12603166_f2_89 2584 6356 303 100 110 1.6e−06 Description pir:[LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_1287875_f3_173 2585 6357 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_13680468_c2_336 2586 6358 1080 359 1133 6.4e−115 Description sp:[LN:YBAL_BACSU] [AC:P50863] [GN:YBAL:REC233] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 38.6 KD PROTEIN IN CWLD-GERD INTERGENIC REGION] [SP:P50863] [DB:swissprot] >pir:[LN:A69743] [AC:A69743] [PN:ATP-binding Mrp-like protein homolog ybaL] [GN:ybaL] [CL:conserved probable membrane protein YIL003w] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e95614:g1177249] [LN:BSCWLD] [AC:X74737] [GN:rec233] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis cwlD, rec223 and gerD genes.] [SP:P50863] [LE:1376] [RE:2434] [DI:direct] >gp:[GI:e1182087:g2632421] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybaL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name: ybxI; similar to ATP-binding] [LE:157420] [RE:158478] [DI:direct] >gp:[GI:d1011652:g1644213] [LN:D64126] [AC:D64126] [PN:unknown] [GN:orf14] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L13 and S9, putative cell wall hydrolase CwlD, gerD protein, 16S ribosomal RNA and 23S ribosomal RNA.] [LE:6981] [RE:8039] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_13871068_c1_247 2587 6359 666 221 893 1.7e−89 Description gp:[GI:d1039013:g4512410] [LN:AB017508] [AC:AB017508] [GN:rpsC] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, complete cds.] [NT:rpsC homologue (identity of 87% to B. subtilis)] [LE:16781] [RE:17440] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_13886593_c2_318 2588 6360 252 83 96 5.0e−05 Description gp:[GI:g727435] [LN:LLU23376] [AC:U23376] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis N5-(1-carboxyethyl)-L-ornithine synthase (ceo)gene, complete cds.] [NT:putative 6-kDa protein] [LE:165] [RE:353] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_1408450_f2_158 2589 6361 564 187 104 9.8e−06 Description pir:[LN:E71186] [AC:E71186] [PN:hypothetical protein PH1769] [GN:PH1769] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031827:g3258201] [LN:AP000007] [AC:AP000007:AB009464:AB009465:AB009521:AB009522:AB009523:AB009524] [PN:100aa long hypothetical protein] [GN:PH1769] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1485001–1738505 nt. position(7/7).] [LE:59186] [RE:59488] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_1410277_f1_4 2590 6362 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_14277217_c2_297 2591 6363 516 171 626 3.4e−61 Description sp:[LN:RS5_BACSU] [AC:P21467] [GN:RPSE:SPCA] [OR:BACILLUS SUBTILIS] [DE:30S RIBOSOMAL PROTEIN S5 (BS5)] [SP:P21467] [DB:swissprot] >pir:[LN:R3BS5S] [AC:D69699:S12680:S11355] [PN:ribosomal protein S5] [GN:rpsE] [CL:Escherichia coli ribosomal protein S5] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g1044981] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein S5] [GN:rpsE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:3585] [RE:4085] [DI:direct] >gp:[GI:e1182066:g2632400] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein S5] [GN:rpsE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P21467] [LE:143359] [RE:143859] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_14312750_c3_354 2592 6364 492 163 665 2.5e−65 Description sp:[LN:RL13_STACA] [AC:Q00990] [GN:RPLM] [OR:STAPHYLOCOCCUS CARNOSUS] [DE:50S RIBOSOMAL PROTEIN L13] [SP:Q00990] [DB:swissprot] >pir:[LN:S23063] [AC:S23063] [PN:ribosomal protein L13] [GN:rplM] [CL:Escherichia coli ribosomal protein L13] [OR:Staphylococcus carnosus] [DB:pir2] >gp:[GI:g46912] [LN:SCRPLM] [AC:X63912:S79454] [PN:ribosomal protein L13] [GN:rplM] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:S. carnosus rplM gene for ribosomal protein L13.] [SP:Q00990] [LE:309] [RE:746] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_14346067_c2_316 2593 6365 1023 340 561 2.6e−54 Description gp:[GI:g4321580] [LN:AF050114] [AC:AF050114] [PN:alginate lyase] [OR:Pseudomonas sp. W7] [DB:genpept-bct2] [DE:Pseudomonas sp. W7 alginate lyase gene, complete cds.] [LE:1] [RE:1038] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_14531558_f1_53 2594 6366 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_14900826_c3_386 2595 6367 351 116 188 8.9e−15 Description gp:[GI:g208931] [LN:SYNORFLAC] [AC:M15619] [OR:synthetic construct] [SR:E. coli (strain SE5000) synthetic DNA, clone pKB1] [DB:genpept-syn] [DE:Synthetic E. coli ORF16/lacZ fusion protein, partial cds.] [NT:ORF16-lacZ fusion protein] [LE:29] [RE:>232] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_157750_c3_379 2596 6368 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_15879002_f2_96 2597 6369 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_16829627_c2_300 2598 6370 372 123 484 3.8e−46 Description gp:[GI:g1044989] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein S13] [GN:rpsM] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:8197] [RE:8562] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_16835333_c2_288 2599 6371 840 279 1198 8.3e−122 Description gp:[GI:g1165306] [LN:BSU43929] [AC:U43929] [PN:L2] [GN:rplB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ribosomal protein gene cluster, rpsJ, rplC, rplD, rplW, rplB, rpsS, rplV and rpsC genes, complete cds, and rplP gene, partial cds.] [NT:ribosomal protein] [LE:2266] [RE:3099] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_197127_f2_121 2600 6372 1965 654 285 9.0e−22 Description sp:[LN:Y4XN_RHISN] [AC:P55706] [GN:Y4XN] [OR:RHIZOBIUM SP] [SR:NGR234,] [DE:HYPOTHETICAL 71.0 KD PROTEIN Y4XN] [SP:P55706] [DB:swissprot] >gp:[GI:g2182722] [LN:AE000106] [AC:AE000106:U00090] [PN:Y4xN] [GN:y4xN] [OR:Rhizobium sp. NGR234] [DB:genpept-bct2] [DE:Rhizobium sp. NGR234 plasmid pNGR234a, section 43 of 46 of the complete plasmid sequence.] [NT:hypothetical 71 kd protein; similar to Escherichia] [LE:6573] [RE:8459] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_19730052_c1_278 2601 6373 1479 492 990 9.2e−100 Description pir:[LN:F69763] [AC:F69763] [PN:multidrug resistance protein homolog ycnB] [GN:ycnB] [CL:lincomycin-resistance protein lmrB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182351:g2632685] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycnB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:similar to multidrug resistance protein] [LE:32866] [RE:34284] [DI:complement] >gp:[GI:d1009651:g1805454] [LN:D50453] [AC:D50453] [PN:homologue of multidrug resistance protein B,] [GN:ycnB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing the amyE-srfA region, complete cds.] [LE:115269] [RE:116687] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_19822151_c2_302 2602 6374 372 123 433 9.7e−41 Description pir:[LN:F32307] [AC:F32307:C69696] [PN:ribosomal protein L17:ribosomal protein BL15 (rplQ)] [GN:rplQ] [CL:Escherichia coli ribosomal protein L17] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142464] [LN:BACALPHA] [AC:M26414] [PN:ribosomal protein L17] [GN:rplQ] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:B. subtilis initiation factor 1, ribosomal proteins B, S13, S11, L17 and RNA polymerase alpha core protein genes, complete cds.] [LE:2603] [RE:2965] [DI:direct] >gp:[GI:g1044992] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein L17] [GN:rplQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:10177] [RE:10539] [DI:direct] >gp:[GI:e1182077:g2632411] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L17 (BL15)] [GN:rplQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P20277] [LE:149951] [RE:150313] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_20363762_c3_375 2603 6375 1215 404 587 4.7e−57 Description gp:[GI:g5052662] [LN:AF145686] [AC:AF145686] [PN:BcDNA.LD24639] [GN:BcDNA.LD24639] [OR:Drosophila melanogaster] [SR:fruit fly] [DB:genpept-inv2] [DE:Drosophila melanogaster clone LD24639 BcDNA.LD24639 (BcDNA.LD24639)mRNA, complete cds.] [LE:199] [RE:1761] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_2125637_f3_165 2604 6376 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_21516287_f1_6 2605 6377 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_21751063_c1_245 2606 6378 579 192 621 1.2e−60 Description sp:[LN:RL3_BACST] [AC:P28600] [GN:RPLC] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L3] [SP:P28600] [DB:swissprot] >pir:[LN:S24363] [AC:S24363:S36085] [PN:ribosomal protein L3] [GN:rpl3] [CL:Escherichia coli ribosomal protein L3] [OR:Bacillus stearothermophilus] [DB:pir2] >gp:[GI:g40102] [LN:BSRPLCLD] [AC:X67014:S42397] [PN:ribosomal protein L3] [GN:rp1C] [OR:Bacillus stearothermophilus] [DB:genpept-bct1] [DE:B. stearothermophilus genes rplC and rplD for ribosomal proteins L3 and L4, respectively.] [SP:P28600] [LE:52] [RE:693] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_21915941_c1_250 2607 6379 372 123 571 2.3e−55 Description sp:[LN:RL14_BACSU] [AC:P12875] [GN:RPLN] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L14] [SP:P12875] [DB:swissprot] >pir:[LN:R5BS4B] [AC:S05992:H69695] [PN:ribosomal protein L14] [GN:rplN] [CL:Escherichia coli ribosomal protein L14] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g1044974] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein L14] [GN:rplN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:675] [RE:1043] [DI:direct] >gp:[GI:g40150] [LN:BSSPC] [AC:X15664] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis S10/spc operon rpmC, rpsQ, rplN, rplX, rplE, rpsN genes.] [NT:L14 protein (AA 1–122)] [SP:P12875] [LE:840] [RE:1208] [DI:direct] >gp:[GI:e1182059:g2632393] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L14] [GN:rplN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P12875] [LE:140449] [RE:140817] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_22002318_c3_342 2608 6380 330 109 390 3.5e−36 Description sp:[LN:RL24_BACST] [AC:P04455] [GN:RPLX] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L24] [SP:P04455] [DB:swissprot] >pir:[LN:R5BS24] [AC:A02819] [PN:ribosomal protein L24] [CL:Escherichia coli ribosomal protein L24] [OR:Bacillus stearothermophilus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_22455303_f3_190 2609 6381 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_22688428_c3_383 2610 6382 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_22900877_c1_252 2611 6383 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23460931_f2_100 2612 6384 429 142 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23572128_c3_346 2613 6385 183 60 282 9.7e−25 Description sp:[LN:RL30_STAAU] [AC:006444] [GN:RPMD] [OR:STAPHYLOCOCCUS AUREUS] [DE:50S RIBOSOMAL PROTEIN L30] [SP:O06444] [DB:swissprot] >gp:[GI:g2078380] [LN:SAU96620] [AC:U96620] [PN:ribosomal protein L30] [GN:L30] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus NCTC 8325 ribosomal protein L30 (L30),ribosomal protein L15 (L15) and SecY (secY) genes, complete cds.] [LE:65] [RE:244] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23572180_c3_349 2614 6386 222 73 326 2.1e−29 Description pir:[LN:F69644] [AC:F69644] [PN:translation initiation factor IF-1] [GN:infA] [CL:translation initiation factor IF-1] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142459] [LN:BACALPHA] [AC:M26414] [PN:initiation factor 1] [GN:infA] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:B. subtilis initiation factor 1, ribosomal proteins B, S13, S11, L17 and RNA polymerase alpha core protein genes, complete cds.] [LE:235] [RE:453] [DI:direct] >gp:[GI:g1044987] [LN:BACRPLP] [AC:L47971] [PN:initiation factor IF-1] [GN:infA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:7809] [RE:8027] [DI:direct] >gp:[GI:e1182072:g2632406] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:initiation factor IF-I] [GN:infA] [FN:protein synthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P20458] [LE:147583] [RE:147801] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23573587_c2_294 2615 6387 201 66 287 2.9e−25 Description gp:[GI:d1039020:g4512417] [LN:AB017508] [AC:AB017508] [GN:rpsN] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, complete cds.] [NT:rpsN homologue (identity of 92% to B. subtilis)] [LE:19712] [RE:19897] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23603450_c2_317 2616 6388 585 194 85 0.0017 Description pir:[LN:S77761] [AC:S77761] [PN:probable phosphotransferase system enzyme II,:protein MC456:protein-Npi-phosphohistidine--sugar phosphotransferase] [OR:Mycoplasma capricolum] [EC:2.7.1.69] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23632750_c3_365 2617 6389 525 174 726 8.7e−72 Description pir:[LN:JC2527] [AC:JC2527:PC2381] [PN:alkaline shock protein] [GN:asp23] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g894289] [LN:S76213] [AC:S76213] [PN:alkaline shock protein 23] [GN:asp23] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus 912] [DB:genpept-bct1] [DE:asp23 = alkaline shock protein 23 {methicillin resistant} [Staphylococcus aureus, 912, Genomic, 1360 nt].] [NT:Method: conceptual translation with partial peptide] [LE:343] [RE:852] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23634813_c3_355 2618 6390 771 256 970 1.2e−97 Description sp:[LN:LACR_STAAU] [AC:P16644] [GN:LACR] [OR:STAPHYLOCOCCUS AUREUS] [DE:LACTOSE PHOSPHOTRANSFERASE SYSTEM REPRESSOR] [SP:P16644] [DB:swissprot] >pir:[LN:A44506] [AC:A44506] [PN:lactose operon repressor lacR] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g153035] [LN:STALACR] [AC:M32103] [PN:lacR repressor] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain 8325-4) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus lac repressor (lacR) gene, complete cds and lacA repressor (lacA), partial cds.] [LE:1058] [RE:1813] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23642761_f1_22 2619 6391 228 75 80 0.0064 Description gp:[GI:d1000903:g220579] [LN:MUSPRIMP] [AC:D00570:J00614] [OR:Mus musculus] [SR:Mus musculus male cDNA to mRNA] [DB:genpept-rod] [DE:Mus musculus mRNA for ORFs (putative primordial protein), complete cds.] [NT:open reading frame (196 AA)] [LE:584] [RE:1174] [DI:direct] >gp:[GI:d1000903:g220579] [LN:MUSPRIMP] [AC:D00570:J00614] [OR:Mus musculus] [SR:Mus musculus male cDNA to mRNA] [DB:genpept] [DE:Mus musculus mRNA for ORFs (putative primordial protein), complete cds.] [NT:open reading frame (196 AA)] [LE:584] [RE:1174] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23683375_c3_356 2620 6392 507 168 583 1.2e−56 Description sp:[LN:LACA_STRMU] [AC:P26423] [GN:LACA] [OR:STREPTOCOCCUS MUTANS] [EC:5.3.1.26] [DE:GALACTOSE-6-PHOSPHATE ISOMERASE LACA SUBUNIT,] [SP:P26423] [DB:swissprot] >pir:[LN:C43258] [AC:C43258:S27701] [PN:galactoside O-acetyltransferase,] [GN:lacA] [OR:Streptococcus mutans] [EC:2.3.1.18] [DB:pir2] >gp:[GI:g153673] [LN:STRLACOP] [AC:M80797] [PN:galactosidase acetyltransferase] [GN:lacA] [OR:Streptococcus mutans] [SR:Streptococcus mutans (strain PS14) DNA] [DB:genpept-bct1] [EC:2.3.1.18] [DE:Streptococcus mutans lac operon.] [LE:1534] [RE:1962] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_2379658_f2_82 2621 6393 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23882135_c2_303 2622 6394 873 290 665 2.5e−65 Description sp:[LN:YBXA_BACSU] [AC:P40735] [GN:YBXA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBXA] [SP:P40735] [DB:swissprot] >pir:[LN:E69751] [AC:E69751:G32307] [PN:ABC transporter (ATP-binding protein) homolog ybxA] [GN:ybxA] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182078:g2632412] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybxA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name: ybaD; similar to ABC] [SP:P40735] [LE:150441] [RE:151286] [DI:direct] >gp:[GI:d1011641:g1644202] [LN:D64126] [AC:D64126] [PN:unknown] [GN:orf4] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L13 and S9, putative cell wall hydrolase CwlD, gerD protein, 16S ribosomal RNA and 23S ribosomal RNA.] [LE:1] [RE:846] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_23944052_f1_36 2623 6395 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24223787_c1_258 2624 6396 156 51 221 2.8e−18 Description sp:[LN:RPOA_BACSU] [AC:P20429] [GN:RPOA] [OR:BACILLUS SUBTILIS] [EC:2.7.7.6] [DE:ALPHA CHAIN) (RNA POLYMERASE ALPHA SUBUNIT)] [SP:P20429] [DB:swissprot] >pir:[LN:E32307] [AC:E32307:C24972:E69698] [PN:DNA-directed RNA polymerase, alpha chain rpoA:transcriptase alpha chain] [GN:rpoA] [CL:DNA-directed RNA polymerase alpha chain] [OR:Bacillus subtilis] [EC:2.7.7.6] [DB:pir2] >gp:[GI:g142463] [LN:BACALPHA] [AC:M26414] [PN:RNA polymerase alpha-core-subunit] [GN:rpoA] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:B. subtilis initiation factor 1, ribosomal proteins B, S13, S11, L17 and RNA polymerase alpha core protein genes, complete cds.] [LE:1581] [RE:2525] [DI:direct] >gp:[GI:g1044991] [LN:BACRPLP] [AC:L47971] [PN:RNA polymerase alpha-core-subunit] [GN:rpoA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:9155] [RE:10099] [DI:direct] >gp:[GI:e1182076:g2632410] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:RNA polymerase (alpha subunit)] [GN:rpoA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.6] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P20429] [LE:148929] [RE:149873] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24244012_c3_374 2625 6397 546 181 280 1.6e−24 Description pir:[LN:C70048] [AC:C70048] [PN:conserved hypothetical protein yvsG] [GN:yvsG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249789:g2832793] [LN:BS43KBDNA] [AC:AJ223978] [PN:YvsG protein] [GN:yvsG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7 kB DNA fragment from yvsA to yvqA.] [LE:5971] [RE:6453] [DI:complement] >gp:[GI:e1186023:g2635848] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvsG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:21284] [RE:21766] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24252318_c1_256 2626 6398 126 41 191 4.3e−15 Description sp:[LN:RL36_BACST] [AC:P07841] [GN:RPMJ] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:(BL38)] [SP:P07841] [DB:swissprot] >pir:[LN:R5BS36] [AC:S08566:S59066] [PN:ribosomal protein L36:ribosomal protein BL38:ribosomal protein II] [CL:Escherichia coli ribosomal protein L36] [OR:Bacillus stearothermophilus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24328927_f1_39 2627 6399 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24337750_c2_312 2628 6400 981 326 1524 2.4e−156 Description sp:[LN:LACD_STAAU] [AC:P11100] [GN:LACD] [OR:STAPHYLOCOCCUS AUREUS] [EC:4.1.2.40] [DE:ALDOLASE) (D-TAGATOSE-1,6-BISPHOSPHATE ALDOLASE)] [SP:P11100] [DB:swissprot] >pir:[LN:S04359] [AC:S04359] [PN:lacD protein] [GN:lacD] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46606] [LN:SALACCD] [AC:X14827] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus lacC and lacD genes.] [NT:lacD polypeptide (AA 1–326)] [SP:P11100] [LE:991] [RE:1971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24339718_c2_335 2629 6401 483 160 93 0.033 Description gp:[GI:e246715:g1617437] [LN:SGCOM7865] [AC:X98110] [PN:pheromone receptor] [GN:comD2] [OR:Streptococcus gordonii] [DB:genpept-bct1] [DE:S. gordonii tRNA-Arg, comC2, comD2 & comE2 genes.] [NT:histidine kinase] [LE:656] [RE:2014] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24350953_f1_10 2630 6402 132 43 72 0.017 Description pir:[LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24397127_c2_313 2631 6403 1776 591 2460 1.5e−255 Description sp:[LN:PTLB_STAAU] [AC:P11162] [GN:LACE] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.1.69] [DE:(EC 2.7.1.69) (EII-LAC)] [SP:P11162] [DB:swissprot] >pir:[LN:B28474] [AC:B28474] [PN:phosphotransferase system enzyme II,, lactose-specific, factor II] [OR:Staphylococcus aureus] [EC:2.7.1.69] [DB:pir2] >gp:[GI:g153038] [LN:STALACS] [AC:J03479:M17729] [OR:Staphylococcus aureus] [SR:S. aureus (strain 8325-4) DNA, clone pFB34] [DB:genpept-bct1] [DE:S. aureus enzyme III-lac (lacF), enzyme II-lac (lacE), and phospho-beta-galactosidase (lacG) genes, complete cds.] [NT:enzyme II-lac (lacE)] [LE:413] [RE:2131] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24402217_c3_350 2632 6404 405 134 560 3.4e−54 Description sp:[LN:RS11_BACSU] [AC:P04969] [GN:RPSK] [OR:BACILLUS SUBTILIS] [DE:30S RIBOSOMAL PROTEIN S11 (BS11)] [SP:P04969] [DB:swissprot] >pir:[LN:R3BSS1] [AC:D32307:B24972:S11361:B69700] [PN:ribosomal protein S11:ribosomal protein BS11] [GN:rpsK] [CL:Escherichia coli ribosomal protein S11] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g142462] [LN:BACALPHA] [AC:M26414] [PN:ribosomal protein S11] [GN:rpsK] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:B. subtilis initiation factor 1, ribosomal proteins B, S13, S11, L17 and RNA polymerase alpha core protein genes, complete cds.] [LE:1009] [RE:1404] [DI:direct] >gp:[GI:g1044990] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein S11] [GN:rpsK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:8583] [RE:8978] [DI:direct] >gp:[GI:g143451] [LN:BACRPOA] [AC:M13957] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168 Marburg) DNA clone lambda-gt11-11-1] [DB:genpept-bct1] [DE:B. subtilis DNA sequence of the rpsM-rpoA interval.] [NT:ribosomal protein S11] [LE:133] [RE:528] [DI:direct] >gp:[GI:e1182075:g2632409] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein S11 (BS11)] [GN:rpsK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P04969] [LE:148357] [RE:148752] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24641927_c1_273 2633 6405 1380 459 978 1.7e−98 Description sp:[LN:YKAA_BACFI] [AC:P30267] [OR:BACILLUS FIRMUS] [DE:HYPOTHETICAL 50.9 KD PROTEIN IN KATA 3′REGION (ORF A)] [SP:P30267] [DB:swissprot] >pir:[LN:S27491] [AC:S27491] [PN:hypothetical protein A] [OR:Bacillus firmus] [DB:pir2] >gp:[GI:g143121] [LN:BACKATA2] [AC:L02548:M74194] [OR:Bacillus firmus] [SR:Bacillus firmus DNA] [DB:genpept-bct1] [DE:B. firmus ORF A and ORF B, complete cds.] [NT:ORF A; putative] [LE:225] [RE:1616] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24648312_f1_48 2634 6406 747 248 905 9.3e−91 Description gp:[GI:g845686] [LN:STALACR] [AC:M32103] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain 8325-4) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus lac repressor (lacR) gene, complete cds and lacA repressor (lacA), partial cds.] [NT:ORF-27] [LE:76] [RE:807] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24744040_c1_270 2635 6407 1065 354 361 4.1e−33 Description gp:[GI:g4982168] [LN:AE001804] [AC:AE001804:AE000512] [PN:hypothetical protein] [GN:TM1597] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 116 of 136 of the complete genome.] [NT:similar to percent identity: 0.00; identified by] [LE:7299] [RE:8363] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24806662_c1_248 2636 6408 237 78 252 1.5e−21 Description sp:[LN:RL29_BACSU] [AC:P12873] [GN:RPMC] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L29] [SP:P12873] [DB:swissprot] >pir:[LN:R5BS2L] [AC:S05990:E69697] [PN:ribosomal protein L29] [GN:rpmC] [CL:Escherichia coli ribosomal protein L29] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g1044972] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein L29] [GN:rpmC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:142] [RE:342] [DI:direct] >gp:[GI:g40148] [LN:BSSPC] [AC:X15664] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis S10/spc operon rpmC, rpsQ, rplN, rplX, rplE, rpsN genes.] [NT:L29 protein (AA 1–66)] [SP:P12873] [LE:313] [RE:513] [DI:direct] >gp:[GI:e1182057:g2632391] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L29] [GN:rpmC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P12873] [LE:139922] [RE:140122] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_24855303_c3_368 2637 6409 1047 348 784 6.2e−78 Description pir:[LN:C69812] [AC:C69812] [PN:ferrichrome ABC transporter (permease) homolog yfmD] [GN:yfmD] [CL:ferrichrome ABC transporter] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182741:g2633075] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfmD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to ferrichrome ABC transporter (permease)] [LE:21402] [RE:22403] [DI:complement] >gp:[GI:d1023181:g2443247] [LN:D86417] [AC:D86417] [PN:YfmD] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:26118] [RE:27119] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_25908568_c1_253 2638 6410 453 150 706 1.1e−69 Description sp:[LN:RL15_STAAU] [AC:O06445] [GN:RPLO] [OR:STAPHYLOCOCCUS AUREUS] [DE:50S RIBOSOMAL PROTEIN L15] [SP:O06445] [DB:swissprot] >gp:[GI:g2078381] [LN:SAU96620] [AC:U96620] [PN:ribosomal protein L15] [GN:L15] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus NCTC 8325 ribosomal protein L30 (L30), ribosomal protein L15 (L15) and SecY (secY) genes, complete cds.] [LE:261] [RE:701] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_26205151_f2_85 2639 6411 156 51 123 6.9e−08 Description pir:[LN:B71245] [AC:B71245] [PN:hypothetical protein PH0220] [GN:PH0220] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030232:g3256606] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:171aa long hypothetical protein] [GN:PH0220] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [LE:192864] [RE:193379] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_26360036_c3_345 2640 6412 387 128 429 2.6e−40 Description sp:[LN:RL18_BACSU] [AC:P46899:P70969] [GN:RPLR] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L18] [SP:P46899:P70969] [DB:swissprot] >gp:[GI:g1044980] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein L18] [GN:rplR] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:3198] [RE:3560] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_26773450_c1_249 2641 6413 285 94 380 4.0e−35 Description sp:[LN:RS17_BACST] [AC:P23828] [GN:RPSQ] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:30S RIBOSOMAL PROTEIN S17] [SP:P23828] [DB:swissprot] >pir:[LN:S17865] [AC:S17865:S59056] [PN:ribosomal protein S17] [GN:rps17] [CL:Escherichia coli ribosomal protein S17] [OR:Bacillus stearothermophilus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_26776678_c2_290 2642 6414 372 123 431 1.6e−40 Description sp:[LN:RL22_BACST] [AC:P23311] [GN:RPLV] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L22] [SP:P23311] [DB:swissprot] >pir:[LN:S10612] [AC:S10612] [PN:ribosomal protein L22] [CL:Escherichia coli ribosomal protein L22] [OR:Bacillus stearothermophilus] [DB:pir2] >gp:[GI:g40107] [LN:BSRPLS] [AC:X54994] [PN:ribosomal protein L22] [OR:Bacillus stearothermophilus] [DB:genpept-bct1] [DE:B. stearothermophilus gene for ribosomal proteins L2, S19, L22, S3, and L16.] [SP:P23311] [LE:923] [RE:1264] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_2735801_c1_269 2643 6415 1848 615 274 1.3e−20 Description sp:[LN:Y4XN_RHISN] [AC:P55706] [GN:Y4XN] [OR:RHIZOBIUM SP] [SR:NGR234,] [DE:HYPOTHETICAL 71.0 KD PROTEIN Y4XN] [SP:P55706] [DB:swissprot] >gp:[GI:g2182722] [LN:AE000106] [AC:AE000106:U00090] [PN:Y4xN] [GN:y4xN] [OR:Rhizobium sp. NGR234] [DB:genpept-bct2] [DE:Rhizobium sp. NGR234 plasmid pNGR234a, section 43 of 46 of the complete plasmid sequence.] [NT:hypothetical 71 kd protein; similar to Escherichia] [LE:6573] [RE:8459] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_277312_c1_276 2644 6416 1353 450 452 9.4e−43 Description gp:[GI:e1391039:g4467970] [LN:MXEGLBG] [AC:X76640] [PN:hypothetical protein] [FN:transmembrane protein, putative] [OR:Myxococcus xanthus] [DB:genpept-bct1] [DE:Myxococcus xanthus celA gene and ORFX.] [NT:ORFX] [LE:669] [RE:2192] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_285808_f2_84 2645 6417 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_29314381_f2_151 2646 6418 138 45 79 0.0032 Description pir:[LN:QQECR3] [AC:A04439] [PN:hypothetical protein E-116] [OR:Escherichia coli] [DB:pir1] [MP:72 min] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_29328312_c2_289 2647 6419 339 112 431 1.6e−40 Description gp:[GI:g4927744] [LN:AF126059] [AC:AF126059] [PN:RpS19] [GN:rpsS] [OR:Streptococcus pneumoniae] [DB:genpept-bct2] [DE:Streptococcus pneumoniae isolate R6 ribosomal protein operon, partial sequence.] [NT:30S ribosomal protein S19] [LE:934] [RE:1215] [DI:direct] >gp:[GI:g4927753] [LN:AF126060] [AC:AF126060] [PN:RpS19] [GN:rpsS] [OR:Streptococcus pneumoniae] [DB:genpept-bct2] [DE:Streptococcus pneumoniae isolate ZR1 ribosomal protein operon, partial sequence.] [NT:30S ribosomal protein S19] [LE:934] [RE:1215] [DI:direct] >gp:[GI:g4927762] [LN:AF126061] [AC:AF126061] [PN:RpS19] [GN:rpsS] [OR:Streptococcus pneumoniae] [DB:genpept-bct2] [DE:Streptococcus pneumoniae isolate SP#5 ribosomal protein operon, partial sequence.] [NT:30S ribosomal protein S19] [LE:934] [RE:1215] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_29562550_f3_218 2648 6420 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_30742165_c3_347 2649 6421 1323 440 1919 3.3e−198 Description sp:[LN:SECY_STACA] [AC:Q05217] [GN:SECY] [OR:STAPHYLOCOCCUS CARNOSUS] [DE:PREPROTEIN TRANSLOCASE SECY SUBUNIT] [SP:Q05217] [DB:swissprot] >pir:[LN:S30115] [AC:S30115] [PN:preprotein translocase secY] [GN:secY] [CL:preprotein translocase secY] [OR:Staphylococcus carnosus] [DB:pir2] >gp:[GI:g49189] [LN:SCSECY] [AC:X70086:S47913:X68981] [GN:secY] [OR:Staphylococcus carnosus] [DB:genpept-bct1] [DE:S. carnosus secY gene.] [SP:Q05217] [LE:223] [RE:1515] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_3131677_f2_99 2650 6422 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_31377318_c1_246 2651 6423 291 96 297 2.5e−26 Description sp:[LN:RL23_BACSU] [AC:P42924] [GN:RPLW] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L23] [SP:P42924] [DB:swissprot] >pir:[LN:A69697] [AC:A69697] [PN:ribosomal protein L23] [GN:rplW] [CL:Escherichia coli ribosomal protein L23] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:d1009466:g786155] [LN:BACRPL1] [AC:D50302] [PN:Ribosomal Protein L23] [GN:rplW] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L13, L4, L23, L2, S19, L22, S3 and L16, partial and complete cds.] [LE:1140] [RE:1427] [DI:direct] >gp:[GI:e1182051:g2632385] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L23] [GN:rplW] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P42924] [LE:136990] [RE:137277] [DI:direct] >gp:[GI:g1165305] [LN:BSU43929] [AC:U43929] [PN:L23] [GN:rplW] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis ribosomal protein gene cluster, rpsJ, rplC, rplD, rplW, rplB, rpsS, rplV and rpsC genes, complete cds, and rplP gene, partial cds.] [NT:ribosomal protein] [LE:1947] [RE:2234] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_3304562_c3_359 2652 6424 366 121 411 2.1e−38 Description sp:[LN:PTLA_STAAU] [AC:P02909] [GN:LACF] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.1.69] [DE:(EC 2.7.1.69) (EIII-LAC)] [SP:P02909] [DB:swissprot] >gp:[GI:g153037] [LN:STALACS] [AC:J03479:M17729] [OR:Staphylococcus aureus] [SR:S. aureus (strain 8325-4) DNA, clone pFB34] [DB:genpept-bct1] [DE:S. aureus enzyme III-lac (lacF), enzyme II-lac (lacE), and phospho-beta-galactosidase (lacG) genes, complete cds.] [NT:enzyme III-lac (lacF)] [LE:102] [RE:413] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_33437802_c2_299 2653 6425 669 222 772 1.2e−76 Description sp:[LN:KAD_BACSU] [AC:P16304] [GN:ADK] [OR:BACILLUS SUBTILIS] [EC:2.7.4.3] [DE:(SUPEROXIDE-INDUCIBLE PROTEIN 16) (SOI16)] [SP:P16304] [DB:swissprot] >pir:[LN:JS0492] [AC:JS0492:S12684:S08630:E69583] [PN:adenylate kinase,:ATP-AMP transphosphorylase] [GN:adk] [CL:adenylate kinase] [OR:Bacillus subtilis] [EC:2.7.4.3] [DB:pir2] >gp:[GI:g1044985] [LN:BACRPLP] [AC:L47971] [PN:adenylate kinase] [GN:adk] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:6101] [RE:6754] [DI:direct] >gp:[GI:d1000951:g216340] [LN:BACSECY] [AC:D00619] [PN:adenylate kinase] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:207–21) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins, SecY, adenylatekinase and methionine amino peptidase, complete cds.] [LE:2055] [RE:2708] [DI:direct] >gp:[GI:e1182070:g2632404] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:adenylate kinase] [GN:adk] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.4.3] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P16304] [LE:145875] [RE:146528] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_33463542_c2_337 2654 6426 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_34017517_c2_304 2655 6427 828 275 714 1.6e−70 Description pir:[LN:F69742] [AC:F69742] [PN:hypothetical protein ybaF] [GN:ybaF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182080:g2632414] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybaF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [LE:152128] [RE:152925] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_34188213_c2_295 2656 6428 423 140 579 3.3e−56 Description gp:[GI:g1044978] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein S8] [GN:rpsH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:2198] [RE:2596] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_34406562_c1_259 2657 6429 867 288 644 4.2e−63 Description pir:[LN:E69742] [AC:E69742] [PN:ABC transporter (ATP-binding protein) homolog ybaE] [GN:ybaE] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182079:g2632413] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybaE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:151301] [RE:152131] [DI:direct] >gp:[GI:d1011642:g1644203] [LN:D64126] [AC:D64126] [PN:unknown] [GN:orf5] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L13 and S9, putative cell wall hydrolase CwlD, gerD protein, 16S ribosomal RNA and 23S ribosomal RNA.] [LE:861] [RE:1691] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_34557262_c3_384 2658 6430 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_34647177_c2_296 2659 6431 558 185 638 1.8e−62 Description gp:[GI:d1039022:g4512419] [LN:AB017508] [AC:AB017508] [GN:rplF] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, complete cds.] [NT:rplF homologue (identity of 78% to B. subtilis)] [LE:20357] [RE:20893] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_34651577_f2_127 2660 6432 1047 348 502 4.7e−48 Description pir:[LN:D69756] [AC:D69756] [PN:conserved hypothetical protein yceB] [GN:yceB] [CL:ynbW protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1023111:g2415739] [LN:AB000617] [AC:AB000617] [PN:YceB] [GN:yceB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 22 to 25 degree region, complete cds.] [NT:homologue of a hypothetical 36.6 kDa protein in] [LE:23969] [RE:24910] [DI:complement] >gp:[GI:e1182240:g2632574] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yceB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to 415810.] [NT:similar to hypothetical proteins] [LE:115784] [RE:116725] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_35348182_f2_94 2661 6433 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_36135437_c2_287 2662 6434 648 215 676 1.7e−66 Description sp:[LN:RL4_BACST] [AC:P28601] [GN:RPLD] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L4] [SP:P28601] [DB:swissprot] >pir:[LN:S24364] [AC:S24364:S36086] [PN:ribosomal protein L4] [GN:rpl4] [CL:Escherichia coli ribosomal protein L4] [OR:Bacillus stearothermophilus] [DB:pir2] >gp:[GI:g40103] [LN:BSRPLCLD] [AC:X67014:S42397] [PN:ribosomal protein L4] [GN:rp1D] [OR:Bacillus stearothermophilus] [DB:genpept-bct1] [DE:B. stearothermophilus genes rplC and rplD for ribosomal proteins L3 and L4, respectively.] [SP:P28601] [LE:724] [RE:1347] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_36226575_c1_251 2663 6435 558 185 766 5.0e−76 Description sp:[LN:RL5_BACSU] [AC:P12877] [GN:RPLE] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L5 (BL6)] [SP:P12877] [DB:swissprot] >pir:[LN:R5BS5] [AC:S05994:A69695] [PN:ribosomal protein L5:BL6] [GN:rplE] [CL:Escherichia coli ribosomal protein L5] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:g1044976] [LN:BACRPLP] [AC:L47971] [PN:ribosomal protein L5] [GN:rplE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ribosomal protein (rplPNXEFROQ, rpmCDJ, rpsQNHEMK) genes, integral membrane protein (secY) gene, adenylatekinase (adk) gene, methionine aminopeptidase (map) gene, initiation factor 1 (infA) gene, RNA polymerase alpha (rpoA) gene.] [LE:1419] [RE:1958] [DI:direct] >gp:[GI:g40152] [LN:BSSPC] [AC:X15664] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis S10/spc operon rpmC, rpsQ, rplN, rplX, rplE, rpsN genes.] [NT:L5 protein (AA 1–179)] [SP:P12877] [LE:1584] [RE:2123] [DI:direct] >gp:[GI:e1182061:g2632395] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L5 (BL6)] [GN:rplE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P12877] [LE:141193] [RE:141732] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4062510_f3_217 2664 6436 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4100327_f3_181 2665 6437 360 119 133 6.0e−09 Description pir:[LN:D69798] [AC:D69798] [PN:hypothetical protein yetG] [GN:yetG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182694:g2633028] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yetG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [LE:183921] [RE:184298] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4165677_c2_305 2666 6438 807 268 544 1.7e−52 Description sp:[LN:TRUA_BACSU] [AC:P70973] [GN:TRUA] [OR:BACILLUS SUBTILIS] [EC:4.2.1.70] [DE:I) (PSEUDOURIDINE SYNTHASE I) (URACIL HYDROLYASE)] [SP:P70973] [DB:swissprot] >pir:[LN:F69726] [AC:F69726] [PN:pseudouridylate synthase I truA] [GN:truA] [CL:tRNA-pseudouridine synthase I] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182081:g2632415] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:pseudouridylate synthase I] [GN:truA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:4.2.1.70] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name: ybaH] [SP:P70973] [LE:152935] [RE:153678] [DI:direct] >gp:[GI:d1011645:g1644206] [LN:D64126] [AC:D64126] [PN:unknown] [GN:orf8] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L13 and S9, putative cell wall hydrolase CwlD, gerD protein, 16S ribosomal RNA and 23S ribosomal RNA.] [LE:2496] [RE:3239] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4305287_f3_211 2667 6439 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4564036_c3_363 2668 6440 1044 347 898 5.2e−90 Description pir:[LN:A69813] [AC:A69813] [PN:quinone oxidoreductase homolog yfmJ] [GN:yfmJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182735:g2633069] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfmJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to quinone oxidoreductase] [LE:14498] [RE:15517] [DI:complement] >gp:[GI:d1023187:g2443253] [LN:D86417] [AC:D86417] [PN:YfmJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 35.7 kb genomic DNA, 70–73 degree region, complete cds.] [LE:33004] [RE:34023] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4694030_c3_367 2669 6441 1236 411 362 3.2e−33 Description gp:[GI:g5354197] [LN:AF157493] [AC:AF157493] [PN:putative transporter] [GN:ditE] [OR:Zymomonas mobilis] [DB:genpept] [DE:Zymomonas mobilis ZM4 fosmid clone 42D7, complete sequence.] [LE:17549] [RE:18844] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4697262_c2_310 2670 6442 540 179 806 2.9e−80 Description pir:[LN:D43258] [AC:D43258] [PN:galactose-6-phosphate isomerase subunit LacB] [OR:Streptococcus mutans] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4714817_c2_315 2671 6443 879 292 200 1.0e−14 Description gp:[GI:g4206189] [LN:LLU60828] [AC:U60828] [PN:unknown] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis galactose-lactose operon, complete sequence.] [NT:orfx] [LE:12631] [RE:13554] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4886592_c3_341 2672 6444 450 149 614 6.4e−60 Description sp:[LN:RL16_BACSU] [AC:P14577] [GN:RPLP] [OR:BACILLUS SUBTILIS] [DE:50S RIBOSOMAL PROTEIN L16] [SP:P14577] [DB:swissprot] >pir:[LN:B69696] [AC:B69696:S05989] [PN:ribosomal protein L16 (rplP)] [GN:rplP] [CL:Escherichia coli ribosomal protein L16] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182056:g2632390] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein L16] [GN:rplP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [LE:139498] [RE:139932] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4897202_c1_257 2673 6445 768 255 996 2.1e−100 Description sp:[LN:RPOA_BACS5] [AC:O50634] [GN:RPOA] [OR:BACILLUS SP] [SR:C-125,] [EC:2.7.7.6] [DE:ALPHA CHAIN) (RNA POLYMERASE ALPHA SUBUNIT)] [SP:O50634] [DB:swissprot] >gp:[GI:d1025104:g2760185] [LN:AB010082] [AC:AB010082] [PN:RNA polymerase alpha subunit] [GN:rpoA] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 gene for initiation factor IF-I, RNA polymerase alpha subunit and ribosomal proteins, partial and complete cds.] [LE:1701] [RE:2645] [DI:direct] >gp:[GI:d1039034:g4512431] [LN:AB017508] [AC:AB017508] [GN:rpoA] [OR:Bacillus halodurans] [SR:Bacillus halodurans (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus halodurans C-125 genomic DNA, 32 kb fragment, complete cds.] [NT:rpoA homologue (identity of 85% to B. subtilis)] [LE:26934] [RE:27878] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4897253_f3_189 2674 6446 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_4901712_c1_261 2675 6447 408 135 496 2.0e−47 Description pir:[LN:H69699] [AC:H69699:S11359] [PN:ribosomal protein S9 (rpsI):ribosomal protein BS10] [GN:rpsI] [CL:Escherichia coli ribosomal protein S9] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182083:g2632417] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:ribosomal protein S9] [GN:rpsI] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [SP:P21470] [LE:154299] [RE:154691] [DI:direct] >gp:[GI:d1011647:g1644208] [LN:D64126] [AC:D64126] [PN:ribosomal protein S9] [GN:rpsI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genes for ribosomal proteins L13 and S9, putative cell wall hydrolase CwlD, gerD protein, 16S ribosomal RNA and 23S ribosomal RNA.] [LE:3860] [RE:4252] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_5110637_c2_306 2676 6448 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_5189012_f1_55 2677 6449 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_55437_c2_314 2678 6450 1428 475 2439 2.6e−253 Description sp:[LN:LACG_STAAU] [AC:P11175] [GN:LACG] [OR:STAPHYLOCOCCUS AUREUS] [EC:3.2.1.85] [DE:GALACTOHYDROLASE) (PGALASE) (P-BETA-GAL) (PBG)] [SP:P11175] [DB:swissprot] >pir:[LN:A27233] [AC:A27233] [PN:beta-galactosidase,:lactase] [CL:Agrobacterium beta-glucosidase] [OR:Staphylococcus aureus] [EC:3.2.1.23] [DB:pir2] >gp:[GI:g153039] [LN:STALACS] [AC:J03479:M17729] [OR:Staphylococcus aureus] [SR:S. aureus (strain 8325-4) DNA, clone pFB34] [DB:genpept-bct1] [DE:S. aureus enzyme III-lac (lacF), enzyme II-lac (lacE), and phospho-beta-galactosidase (lacG) genes, complete cds.] [NT:phospho-beta-galactosidase (lacG)] [LE:2149] [RE:3561] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_6854675_f1_20 2679 6451 279 92 119 1.8e−07 Description pir:[LN:A69895] [AC:A69895] [PN:hypothetical protein ynzG] [GN:ynzG] [CL:hypothetical protein yolF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183408:g2634133] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ynzG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [LE:99142] [RE:99393] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_797308_f2_112 2680 6452 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_812840_c1_260 2681 6453 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000996_9771907_c2_334 2682 6454 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_10406642_f1_38 2683 6455 342 113 165 2.8e−12 Description sp:[LN:NARQ_BACSU] [AC:P39756] [GN:NARQ:NARAA] [OR:BACILLUS SUBTILIS] [DE:NARQ PROTEIN] [SP:P39756] [DB:swissprot] >pir:[LN:B69665] [AC:B69665] [PN:required for formate dehydrogenase activity narQ] [GN:narQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e276834:g1648855] [LN:BSATPC] [AC:Z81356] [PN:unknown] [GN:narQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis atpC gene.] [SP:P39756] [LE:7048] [RE:7836] [DI:direct] >gp:[GI:g580895] [LN:BSNARAAB] [AC:Z35277] [PN:unknown] [GN:narAA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis (168) narA gene.] [SP:P39756] [LE:490] [RE:1278] [DI:direct] >gp:[GI:e1184577:g2636196] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:narQ] [FN:required for formate dehydrogenase activity] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name: narAA] [SP:P39756] [LE:175331] [RE:176119] [DI:complement] >gp:[GI:e1184577:g2636196] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:narQ] [FN:required for formate dehydrogenase activity] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name: narAA] [SP:P39756] [LE:175331] [RE:176119] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_1054640_f3_189 2684 6456 213 70 170 7.2e−13 Description sp:[LN:NARQ_BACSU] [AC:P39756] [GN:NARQ:NARAA] [OR:BACILLUS SUBTILIS] [DE:NARQ PROTEIN] [SP:P39756] [DB:swissprot] >pir:[LN:B69665] [AC:B69665] [PN:required for formate dehydrogenase activity narQ] [GN:narQ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e276834:g1648855] [LN:BSATPC] [AC:Z81356] [PN:unknown] [GN:narQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis atpC gene.] [SP:P39756] [LE:7048] [RE:7836] [DI:direct] >gp:[GI:g580895] [LN:BSNARAAB] [AC:Z35277] [PN:unknown] [GN:narAA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis (168) narA gene.] [SP:P39756] [LE:490] [RE:1278] [DI:direct] >gp:[GI:e1184577:g2636196] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:narQ] [FN:required for formate dehydrogenase activity] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name: narAA] [SP:P39756] [LE:175331] [RE:176119] [DI:complement] >gp:[GI:e1184577:g2636196] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:narQ] [FN:required for formate dehydrogenase activity] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name: narAA] [SP:P39756] [LE:175331] [RE:176119] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_10580182_f1_9 2685 6457 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_10646887_f1_25 2686 6458 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_11756250_f3_197 2687 6459 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_11767205_f3_213 2688 6460 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_1209800_c2_304 2689 6461 282 93 72 0.0011 Description sp:[LN:LACF_AGRRD] [AC:P29823] [GN:LACF] [OR:AGROBACTERIUM RADIOBACTER] [DE:LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN LACF] [SP:P29823] [DB:swissprot] >pir:[LN:MMAGCF] [AC:S25248:S22740] [PN:membrane protein lacF] [GN:lacF] [CL:inner membrane protein ugpA] [OR:Agrobacterium radiobacter] [DB:pir1] >gp:[GI:g38969] [LN:ARLACOP] [AC:X66596:S40378:S40757] [GN:lacF] [OR:Agrobacterium radiobacter] [DB:genpept-bct1] [DE:A. radiobacter lac operon.] [SP:P29823] [LE:1897] [RE:2793] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_12270176_c2_349 2690 6462 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_12595175_f2_140 2691 6463 498 165 261 1.6e−22 Description sp:[LN:YKKC_BACSU] [AC:P49856] [GN:YKKC] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 11.9 KD PROTEIN IN HMP 3′REGION] [SP:P49856] [DB:swissprot] >pir:[LN:A69857] [AC:A69857] [PN:chaperonin homolog ykkC] [GN:ykkC] [CL:sugE protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1011924:g1063251] [LN:BAC168TRP2] [AC:D78189] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis hmp DNA for 7 ORFs, complete cds.] [NT:unnamed protein product] [LE:4724] [RE:5062] [DI:direct] >gp:[GI:e1181509:g2632029] [LN:BSAJ2571] [AC:AJ002571] [PN:YkkC] [GN:ykkC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [SP:P49856] [LE:28642] [RE:28980] [DI:direct] >gp:[GI:e1183329:g2633663] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykkC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to chaperonin] [SP:P49856] [LE:181591] [RE:181929] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_1375308_c2_341 2692 6464 411 136 103 9.0e−06 Description gp:[GI:g3283053] [LN:AF054173] [AC:AF054173] [PN:staphylococcal accessory regulator A homolog] [GN:sarA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis staphylococcal accessory regulator A homolog (sarA) gene, complete cds.] [LE:887] [RE:1261] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_13849056_c1_251 2693 6465 279 92 79 0.041 Description gp:[GI:e1313955:g3392923] [LN:LLNISG] [AC:AJ000993] [PN:hypothetical protein] [GN:orfD] [OR:Lactococcus lactis] [DB:genpept-bct1] [DE:Lactococcus lactis nisG gene, orfA, orfB, orfC, and orfD.] [LE:3153] [RE:4799] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_1406552_c1_252 2694 6466 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14094002_c2_303 2695 6467 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14097586_f3_201 2696 6468 438 145 470 1.2e−44 Description sp:[LN:URE2_STAXY] [AC:P42874] [GN:UREB] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:3.5.1.5] [DE:UREASE BETA SUBUNIT, (UREA AMIDOHYDROLASE)] [SP:P42874] [DB:swissprot] >pir:[LN:S38484] [AC:S38484] [PN:urease, beta chain] [CL:urease 12K chain:urease 12K chain homology] [OR:Staphylococcus xylosus] [EC:3.5.1.5] [DB:pir1] >gp:[GI:g410515] [LN:SXUREABC] [AC:X74600] [PN:urease beta subunit] [GN:ureB] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S. xylosus gene for ureA, ureB, and ureC genes for urease gamma, beta and alpha subunits.] [SP:P42874] [LE:886] [RE:1299] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14220635_c3_380 2697 6469 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14454632_c2_289 2698 6470 177 58 226 8.4e−19 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14460882_f1_23 2699 6471 189 62 221 2.8e−18 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14501888_f2_129 2700 6472 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14549010_c2_339 2701 6473 666 221 531 4.0e−51 Description gp:[GI:e1429630:g4756162] [LN:A67171] [AC:A67171] [FN:MOBA GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [NT:unnamed protein product] [LE:4821] [RE:5411] [DI:direct] >gp:[GI:g3955208] [LN:AF022796] [AC:AF022796] [PN:MobA] [GN:mobA] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic gene cluster, complete sequence.] [NT:protein similar to MobA of Escherichia coli] [LE:7042] [RE:7632] [DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_14550133_f1_14 2702 6474 543 180 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_15820176_f3_207 2703 6475 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_16129817_f1_68 2704 6476 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_19533567_f2_100 2705 6477 264 87 80 0.0025 Description gp: [GI:g5306165] [LN:AF160864] [AC:AF160864] [PN:orf98] [GN:orf98] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:Open reading frame ymf71 (CPGN); ATT initiation] [LE:37598] [RE:37894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_20112790_c3_399 2706 6478 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_20345067_c3_365 2707 6479 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_2126925_f3_211 2708 6480 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_21611592_f3_236 2709 6481 369 122 89 0.0017 Description pir: [LN:E71805] [AC:E71805] [PN:protein-export membrane protein] [GN:secF] [CL:Escherichia coli preprotein translocase chain secF] [OR:Helicobacter pylori] [SR:strain J99, , strain J99] [SR:strain J99,] [DB:pir2] >gp:[GI:g4156068] [LN:AE001567] [AC:AE001567:AE001439] [PN:PROTEIN-EXPORT MEMBRANE PROTEIN] [GN:secF] [OR:Helicobacter pylori J99] [DB:genpept-bct2] [DE:Helicobacter pylori, strain J99 section 128 of 132 of the complete genome.] [NT:similar to H. pylori 26695 gene HP1549] [LE:9115] [RE:10086] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_21646015_f2_104 2710 6482 210 69 158 1.3e−11 Description gp: [GI:g1022725] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF2] [LE:394] [RE:1083] [DI:complement] >gp: [GI:g295162] [LN:STAMECRA] [AC:L14017] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) geneand unknown ORF, complete cds.] [NT:unknown ORF1; putative] [LE:1492] [RE:2181] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_21675050_f3_230 2711 6483 360 119 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_21681561_f1_74 2712 6484 891 296 776 4.4e−77 Description pir: [LN:D69744] [AC:D69744] [PN:conserved hypothetical protein ybbI] [GN:ybbI] [CL:conserved hypothetical protein b2428] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1182103:g2632437] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybbI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:similar to hypothetical proteins] [LE:192050] [RE:192964] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_21776942_c1_244 2713 6485 642 213 855 1.9e−85 Description sp: [LN:YBXG_BACSU] [AC:P54425:O31438] [GN:YBXG:YBDP] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL TRANSPORT PROTEIN IN NDHF-CSGA INTERGENIC REGION (ORF1)] [SP:P54425:O31438] [DB:swissprot] >pir: [LN:H69751] [AC:H69751:PC6045] [PN:amino acid permease homolog ybxG] [GN:ybxG] [CL:arginine permease] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1034070:g3599629] [LN:AB006424] [AC:AB006424] [GN:ybdP] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23degree.] [LE:29556] [RE:30944] [DI:direct] >gp: [GI:e1182158:g2632492] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ybxG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:alternate gene name: ybdP; similar to amino acid] [SP:P54425] [LE:31905] [RE:33293] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_2211433_f3_205 2714 6486 867 288 534 1.9e−51 Description sp: [LN:URED_BACSB] [AC:Q07400] [GN:URED] [OR:BACILLUS SP] [SR:TB-90,] [DE:UREASE ACCESSORY PROTEIN URED] [SP:Q07400] [DB:swissprot] >pir: [LN:G36950] [AC:G36950] [PN:ureD protein] [OR:Bacillus sp.] [DB:pir2] >gp: [GI:d1003839:g216366] [LN:BACUREA] [AC:D14439] [PN:urease accessory protein] [GN:UreD] [OR:Bacillus sp.] [SR:Bacillus sp. (strain:TB-90) DNA] [DB:genpept-bct1] [DE:Thermophilic Bacillus genes for urease subunits and ureaseaccessory proteins, complete cds.] [LE:4281] [RE:5096] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_22290657_c3_382 2715 6487 387 128 164 3.1e−12 Description gp: [GI:g3283053] [LN:AF054173] [AC:AF054173] [PN:staphylococcal accessory regulator A homolog] [GN:sarA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis staphylococcal accessory regulator Ahomolog (sarA) gene, complete cds.] [LE:887] [RE:1261] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_22455337_f3_217 2716 6488 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_22692177_c1_271 2717 6489 537 178 556 9.0e−54 Description gp: [GI:e1429621:g4756159] [LN:A67171] [AC:A67171] [FN:MOAB GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [NT:unnamed protein product] [LE:1150] [RE:1662] [DI:direct] >gp: [GI:g3955202] [LN:AF022796] [AC:AF022796] [PN:MoaB] [GN:moaB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to MoaB of Escherichia coli] [LE:3371] [RE:3883] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_22734582_c2_293 2718 6490 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_23538332_f1_18 2719 6491 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_23609628_c2_330 2720 6492 975 324 385 1.2e−35 Description gp: [GI:g2645495] [LN:AF017231] [AC:AF017231] [PN:inosine-adenosine-guanosine-nucleoside] [FN:catalyzes the hydrolysis of the N-ribosidic] [OR:Trypanosoma brucei brucei] [DB:genpept-inv1] [DE:Trypanosoma brucei brucei inosine-adenosine-guanosine-nucleosidehydrolase mRNA, complete cds.] [NT:N-ribohydrolase; IAG-nucleoside hydrolase] [LE:187] [RE:1170] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI750300997_23620260_c2_311 2721 6493 1107 368 334 3.0e−30 Description sp: [LN:ODH_ARTSP] [AC:Q44297] [GN:ODH] [OR:ARTHROBACTER SP] [SR:1C,] [EC:l.5.1.28] [DE:OPINE DEHYDROGENASE,] [SP:Q44297] [DB:swissprot] >pir: [LN:I39664] [AC:I39664] [PN:probable D-octopine dehydrogenase,] [OR:Arthrobacter sp.] [EC:1.5.1.11] [DB:pir2] >gp:[GI:d1008736:g1060848] [LN:ARGOD] [AC:D45211] [PN:opine dehydrogenase] [OR:Arthrobacter sp.] [SR:Arthrobacter sp. DNA, clone pODH1] [DB:genpept-bct1] [DE:Arthrobacter sp. gene for opine dehydrogenase, complete cds.] [LE:254] [RE:1333] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_23631551_c3_395 2722 6494 792 263 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_23642167_f3_175 2723 6495 1218 405 611 1.3e−59 Description pir: [LN:B70065] [AC:B70065] [PN:antibiotic resistance protein homolog ywoG] [GN:ywoG] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1184551:g2636170] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywoG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to antibiotic resistance protein] [LE:151451] [RE:152641] [DI:direct] >gp: (GI:e283116:g1684651] [LN:BSZ82987] [AC:Z82987] [PN:unknown similar to quinolon resistance protein] [GN:ywoG] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis ywo[A,B,C,D,E,F,G,H], nrg[A,B], spoIIID and mb1 genes.] [LE:8662] [RE:9852] [DI:complement] >gp: [GI:e1184551:g2636170] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywoG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to antibiotic resistance protein] [LE:151451] [RE:152641] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_23678262_c3_394 2724 6496 573 190 370 4.6e−34 Description pir: [LN:B69832] [AC:B69832] [PN:biotin biosynthesis homolog yhfU] [GN:yhfU] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1183039:g2633373] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhfU] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to biotin biosynthesis] [LE:111897] [RE:112457] [DI:complement] >gp: [GI:e325000:g2226257] [LN:BSY14084] [AC:Y14084] [PN:hypothetical protein] [GN:yhfu] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis chromosomal DNA, region 78–80 degrees: aprE to comK.] [NT:similarity to BioY from Bacillus sphaericus (Swiss] [LE:6325] [RE:6885] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24104677_c2_291 2725 6497 1656 551 1619 2.0e−166 Description sp: [LN:PTIB_BACSU] [AC:P54715] [GN:GLVC:GLVCB:GLV-2] [OR:BACILLUS SUBTILIS] [EC:2.7.1.69] [DE:II, BC COMPONENT),] [SP:P54715] [DB:swissprot] >pir: [LN:G69635] [AC:G69635] [PN:PTS arbutin-like enzyme IIBC component glvC] [GN:glvC] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1182810:g2633144] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:phosphotransferase system (PTS) arbutin-like] [GN:glvC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:alternate gene name: yfiB] [SP:P54715] [LE:88901] [RE:90484] [DI:direct] >gp: [GI:d1009740:g1486243] [LN:D50543] [AC:D50543] [PN:unknown] [GN:glv-2] [FN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168, haplotype:haploid) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 76-degree region, complete cds.] [LE:2577] [RE:4160] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24257012_c1_268 2726 6498 735 244 927 4.4e−93 Description gp: [GI:g3955199] [LN:AF022796] [AC:AF022796] [PN:ModB] [GN:modB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:integral membrane-spanning protein of the] [LE:906] [RE:1577] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24303812_c3_352 2727 6499 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24314818_c2_340 2728 6500 1035 344 1410 2.9e−144 Description gp: [GI:e1429633:g4756163] [LN:A67171] [AC:A67171] [PN:MOPA GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [LE:5470] [RE:6492] [DI:direct] >gp: [GI:g3955209] [LN:AF022796] [AC:AF022796] [PN:MoaA] [GN:moaA] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to MoaA of Escherichia coli] [LE:7691] [RE:8713] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24406502_f2_127 2729 6501 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24406577_c2_346 2730 6502 3156 1051 2317 2.2e−240 Description pir: [LN:E69795] [AC:E69795] [PN:acriflavin resistance protein homolog yerP] [GN:yerP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182651:g2632985] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yerP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to813890.] [NT:similar to acriflavin resistance protein] [LE:131722] [RE:134919] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24431532_c1_277 2731 6503 1254 417 1796 3.6e−185 Description gp: [GI:g4574235] [LN:AF106850] [AC:AF106850] [PN:FmhB] [GN:fmhB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus FmhB (fmhB) gene, complete cds.] [NT:similar to Staphylococcus aureus FemA and FemE] [LE:204] [RE:1469] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24616251_f2_148 2732 6504 696 231 139 2.6e−07 Description gp: [GI:g567887] [LN:STMDNRN] [AC:L37338] [PN:putative repressor] [GN:dnrO] [OR:Streptomyces peucetius] [SR:Streptomyces peucetius ATCC 29050 DNA] [DB:genpept-bct2] [DE:Streptomyces peucetius TDP-D-glucose-4,6-dehydratase (dnrM) gene,3′ end, regulatory protein (dnrN) gene, complete cds, and repressorprotein (dnrO) gene, complete cds.] [NT:putative] [LE:1085] [RE:2107] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24644008_c3_396 2733 6505 792 263 911 2.2e−91 Description gp: [GI:g3955198] [LN:AF022796] [AC:AF022796] [PN:ModA] [GN:modA] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:molybdate-binding lipoprotein of the] [LE:109] [RE:894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24650452_f1_64 2734 6506 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_24804077_c3_358 2735 6507 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_25430317_c1_274 2736 6508 492 163 446 4.1e−42 Description gp: [GI:g3955205] [LN:AF022796] [AC:AF022796] [PN:MobB] [GN:mobB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to MobB of Escherichia coli] [LE:5873] [RE:6355] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_25443838_c2_305 2737 6509 789 262 448 2.5e−42 Description gp: [GI:d1023468:g2506027] [LN:D42078] [AC:D42078] [GN:NAG] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for N-acetyl-glucosaminidase, partialcds.] [LE:<1] [RE:1448] [DI:direct] >gp: [GI:d1023468:g2506027] [LN:D42078] [AC:D42078] [GN:NAG] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept] [DE:Staphylococcus aureus DNA for N-acetyl-glucosaminidase, partialcds.] [LE:<1] [RE:1448] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_25548385_f1_7 2738 6510 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_25554213_f1_49 2739 6511 627 208 943 8.8e−95 Description sp: [LN:UREG_STAXY] [AC:P42877] [GN:UREG] [OR:STAPHYLOCOCCUS XYLOSUS] [DE:UREASE ACCESSORY PROTEIN UREG] [SP:P42877] [DB:swissprot] >gp: [GI:g511070] [LN:SXUREFG] [AC:Z35136] [PN:UreG] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S.xylosus (C2a) UreF and UreG genes.] [SP:P42877] [LE:781] [RE:1395] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_25582885_f1_22 2740 6512 453 150 153 4.6e−11 Description pir: [LN:C70065] [AC:C70065] [PN:transcription regulator MarR family homolog ywoH] [GN:ywoH] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1184550:g2636169] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywoH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to transcriptional regulator (MarR family)] [LE:151016] [RE:151429] [DI:direct] >gp: [GI:e283130:g1684652] [LN:BSZ82987] [AC:Z82987] [PN:unknown, similar to cytolysin SlyA from] [GN:ywoH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis ywo[A,B,C,D,EF,G,HJ, nrg[A,B], spoIIID and mb1 genes.] [LE:9874] [RE:10287] [DI:complement] >gp: [GI:e1184550:g2636169] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywoH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to transcriptional regulator (MarR family)] [LE:151016] [RE:151429] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_25679762_c1_248 2741 6513 831 276 374 1.7e−34 Description sp: [LN:SUHB_BACSU] [AC:Q45499] [GN:SUHB] [OR:BACILLUS SUBTILIS] [DE:EXTRAGENIC SUPPRESSOR PROTEIN SUHB HOMOLOG] [SP:Q45499] [DB:swissprot] >pir: [LN:E69864] [AC:E69864] [PN:myo-inositol-1(or 4)-monophosphatase homolog yktC] [GN:yktC] [CL:suppressor protein suhB] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1185057:g2633838] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:yktC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791to 1603020.] [NT:similar to myo-inositol-1(or 4)-monophosphatase] [SP:Q45499] [LE:142056] [RE:142853] [DI:direct] >gp: [GI:g3282150] [LN:AF012285] [AC:AF0122285:AF012284:U51911] [PN:unknown] [GN:yktC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to E. coli extragenic suppressor protein] [LE:42544] [RE:43341] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_26182800_c1_276 2742 6514 813 270 90 0.045 Description sp: [LN:YCX3_ASTLO] [AC:P34778] [OR:ASTASIA LONGA] [SR:,EUGLENOPHYCEAN ALGA] [DE:HYPOTHETICAL 20.1 KD PROTEIN IN TRNS-RPL20 INTERGENIC REGION (ORF170)] [SP:P34778] [DB:swissprot] >pir: [LN:538600] [AC:538600] [PN:hypothetical protein 170 [rp120 5′ region)] [OR:plastid Astasia longa] [DB:pir2] >gp: [GI:g414866] [LN:ALRIBPTR] [AC:X75653] [GN:orf170] [OR:Chloroplast Astasia longa] [SR:euglenophycean alga] [DB:genpept-pln1] [DE:A.longa plastid genes for ribosomal proteins and tRNAs.] [SP:P34778] [LE:1985] [RE:2497] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_26367127_f1_44 2743 6515 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_26375031_f1_8 2744 6516 195 64 86 0.015 Description pir: [LN:A70387] [AC:A70387] [PN:conserved hypothetical protein aq_1006] [GN:aq_1006] [OR:Aquifex aeolicus] [DB:pir2] >gp: [GI:g2983515] [LN:AE000718] [AC:AE000718:AE000657] [PN:hypothetical protein] [GN:aq_1006] [OR:Aquifex aeolicus] [DB:genpept-bct2] [DE:Aquifex aeolicus section 50 of 109 of the complete genome.] [LE:2797] [RE:5733] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_26758426_c2_316 2745 6517 750 249 121 2.8e−07 Description gp: [GI:g3283053] [LN:AF054173] [AC:AF054173] [PN:staphylococcal accessory regulator A homolog] [GN:sarA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis staphylococcal accessory regulator Ahomolog (sarA) gene, complete cds.] [LE:887] [RE:1261] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_29494067_c3_356 2746 6518 213 70 50 0.031 Description pir: [LN:PC1133] [AC:PC1133:S18087] [PN:hypothetical protein 119 (rmpG 5′ region)] [OR:Lactococcus lactis] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_29697752_c2_302 2747 6519 786 261 499 9.8e−48 Description sp: [LN:LYTR_BACSU] [AC:Q02115] [GN:LYTR] [OR:BACILLUS SUBTILIS] [DE:MEMBRANE-BOUND PROTEIN LYTR] [SP:Q02115] [DB:swissprot] >pir: [LN:A47679] [AC:A47679:H69654] [PN:lyt divergon expression attenuator LytR] [GN:lytR] [CL:Bacillus subtilis probable transcription regulator yvhJ] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:g143156] [LN:BACLYTABCD] [AC:M87645] [PN:membrane bound protein] [GN:lytR] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) DNA] [DB:genpept-bct1] [DE:Bacillus subtillis membrane bound protein (lytA and lytR) ; amidaseenhancer (lytB); and amidase (lytC) genes, complete cds's.) [LE:92] [RE:1012] [DI:complement] >gp: [GI:e1184471:g2636091] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:membrane-bound protein] [GN:lytR] [FN:attenuator role for lytABC and lytR expression] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [SP:Q02115] [LE:65251] [RE:66171] [DI:direct] >gp: [GI:e1184471:g2636091] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:membrane-bound protein] [GN:lytR] [FN:attenuator role for lytABC and lytR expression] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [SP:Q02115] [LE:65251] [RE:66171] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_31284550_f3_237 2748 6520 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_3250075_f3_220 2749 6521 1008 335 705 1.5e−69 Description pir: [LN:A71175] [AC:A71175] [PN:probable dehydrogenase] [GN:PH0597] [OR:Pyrococcus horikoshii] [DB:pir2] >gp: [GI:d1030629:g3257003] [LN:AP000002] [AC:AP000002:AB009475:AB009476:AB009477:AB009478:AB009479:AB009480] [PN:376aa long hypothetical dehydrogenase] [GN:PH0597] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 287001–544000 nt. position (2/7) .] [NT:similar to owl:BSZ9404317 percent identity: 49.821] [LE:248539] [RE:249669] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_33360910_f3_216 2750 6522 549 182 120 1.4e−07 Description pir: [LN:S74932] [AC:S74932] [PN:hypothetical protein slr0686] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp: [GI:d1017705:g1652047] [LN:D90902] [AC:D90902:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 4/27, 402290–524345.] [NT:ORF_ID:slr0686] [LE:27521] [RE:27880] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_33694505_f3_198 2751 6523 162 53 47 0.0063 Description gp: [GI:d1042768:g5103471] [LN:AP000058] [AC:AP000058] [PN:102aa long hypothetical protein] [GN:APE0083] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 1/7.] [LE:56764] [RE:57072] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_3371062_f1_10 2752 6524 333 110 90 0.0034 Description gp: [GI:g1040951] [LN:AOU35271] [AC:U35271] [PN:NADH dehydrogenase subunit 6] [OR:Mitochondrion Anopheles oswaldoi] [SR:Anopheles oswaldoi] [DB:genpept-inv1] [DE:Anopheles oswaldoi NADH dehydrogenase subunit 6 gene, mitochondrialgene encoding mitochondrial product, partial cds.] [LE:<1] [RE:525] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_34192165_f1_63 2753 6525 345 114 264 7.9e−23 Description pir: [LN:B69857] [AC:B69857] [PN:chaperonin homolog ykkD] [GN:ykkD] [CL:sugE protein] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1181510:g2632030] [LN:BSAJ2571] [AC:AJ002571] [PN:YkkD] [GN:ykkD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE: Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:28980] [RE:29297] [DI:direct] >gp: [GI:e1183330:g2633664] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykkD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391to 1411140.] [NT:similar to chaperonin] [LE:181929] [RE:182246] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_34411552_f2_123 2754 6526 1722 573 2703 2.8e−281 Description sp: [LN:URE1_STAXY] [AC:P42873] [GN:UREC] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:3.5.1.5] [DE:UREASE ALPHA SUBUNIT, (UREA AMIDOHYDROLASE)] [SP:P42873] [DB:swissprot] >pir: [LN:S38485] [AC:538485] [PN:urease, 62K chain:urease alpha chain] [GN:ureC] [CL:urease 62K chain:urease 62K chain homology] [OR:Staphylococcus xylosus] [EC:3.5.1.5] [DB:pir2] >gp: [GI:g410516] [LN:SXUREABC] [AC:X74600] [PN:urease alpha subunit] [GN:ureC] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S.xylosus gene for ureA, ureB, and ureC genes for urease gamma,beta and alpha subunits.] [SP:P42873] [LE:1296] [RE:3011] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_34430_f2_96 2755 6527 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_34431300_c2_300 2756 6528 774 257 139 2.8e−09 Description gp: [GI:d1011987:g1402529] [LN:D78257] [AC:D78257] [PN:ORF8] [GN:orf8] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis plasmid:pYI17 DNA] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pYI17 genes for BacA, BacB, ORF3,ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11,partial cds.] [LE:1899] [RE:2261] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_34617187_f2_156 2757 6529 207 68 74 0.00010 Description gp: [GI:g4164553] [LN:AF081828] [AC:AF081828] [PN:NADH dehydrogenase 6] [OR:Mitochondrion Ixodes hexagonus] [SR:Ixodes hexagonus] [DB:genpept-inv2] [DE:Ixodes hexagonus mitochondrial DNA, complete genome.] [LE:9406] [RE:9831] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_35191527_f1_19 2758 6530 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_35319025_f3_200 2759 6531 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_35547892_f3_218 2760 6532 156 51 161 8.5e−12 Description gp: [GI:g2735506] [LN:SCU96107] [AC:U96107] [PN:SceB precursor] [GN:sceB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus N5,N10-methylenetetrahydromethanopterinreductase homolog, SceB precursor (sceB) and putative transmembraneprotein genes, complete cds, and putative Na+/H+ antiporter NhaC(nhaC) gene, partial cds.] [NT:major secreted protein] [LE:1894] [RE:2685] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_35572051_f1_72 2761 6533 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36017151_f2_110 2762 6534 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36113805_c1_245 2763 6535 750 249 775 5.6e−77 Description sp: [LN:YBXG_BACSU] [AC:P54425:O31438] [GN:YBXG:YBDP] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL TRANSPORT PROTEIN IN NDHF-CSGA INTERGENIC REGION (ORF1)] [SP:P54425:O31438] [DB:swissprot] >pir: [LN:H69751] [AC:H69751:PC6045] [PN:amino acid permease homolog ybxG] [GN:ybxG] [CL:arginine permease] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1034070:g3599629] [LN:AB006424] [AC:AB006424] [GN:ybdP] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23degree.] [LE:29556] [RE:30944] [DI:direct] >gp: [GI:e1182158:g2632492] [LN:BSUB0002] [AC:Z99105:AL00912E] [GN:ybxG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:alternate gene name: ybdP; similar to amino acid] [SP:P54425] [LE:31905] [RE:33293] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36132792_c3_402 2764 6536 255 84 218 5.9e−18 Description gp: [GI:e1429627:g4756161] [LN:A67171] [AC:A67171] [PN:MOAD GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [LE:4583] [RE:4816] [DI:direct] >gp: [GI:g3955207] [LN:AF022796] [AC:AF022796] [PN:MoaD] [GN:moaD] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to MoaD of Escherichia coli] [LE:6804] [RE:7037] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36134427_c1_241 2765 6537 657 218 251 1.9e−21 Description sp: [LN:YHCW_BACSU] [AC:P54607] [GN:YHCW] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 24.7 KD PROTEIN IN CSPB-GLPP INTERGENIC REGION] [SP:P54607] [DB:swissprot] >pir: [LN:C69824] [AC:C69824] [PN:phosphoglycolate phosphatase homolog yhcW] [GN:yhcW] [CL:hypothetical protein b2690] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e233881:g1239999] [LN:BS75DGREG] [AC:X96983] [PN:hypothetical protein] [GN:yhcW] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis chromosomal DNA (region 75 degrees: cspB upstream ofglpPFKD operon) .] [NT:similarity to phosphoglycolate phosphatase from] [SP:P54607] [LE:18604] [RE:19266] [DI:direct] >gp: [GI:e1l82913:g2633247] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:similar to phosphoglycolate phosphatase] [SP:P546071 [LE:194410] [RE:195072] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36209660_f2_116 2766 6538 378 125 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36225625_f1_56 2767 6539 795 264 1034 2.0e−104 Description gp: [GI:e244971:g1340128] [LN:SA1234] [AC:X97985] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S.aureus orfs 1,2,3 & 4.] [NT:ORF1] [LE:537] [RE:1304] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_36615903_c2_329 2768 6540 1164 387 1007 1.5e−101 Description pir: [LN:H69771] [AC:H69771] [PN:butyryl-CoA dehydrogenase homolog ydbM] [GN:ydbM] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1020042:g188l262] [LN:AB001488] [AC:AB001488] [GN:ydbM] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:SIMILAR TO ACYL-COA DEHYDROGENASE.] [LE:38215] [RE:39360] [DI:direct] >gp: [GI:e1182418:g2632752] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydbM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE: Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [NT:similar to butyryl-CoA dehydrogenase] [LE:101959] [RE:103104] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_3943752_f2_128 2769 6541 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_3947153_f3_204 2770 6542 456 151 482 6.2e−46 Description sp: [LN:UREE_BACSB] [AC:Q07401] [GN:UREE] [OR:BACILLUS SP] [SR:TB-90,] [DE:UREASE ACCESSORY PROTEIN UP.EE] [SP:Q07401] [DB:swissprot] >pir: [LN:D36950] [AC:D36950] [PN:ureE protein] [OR:Bacillus sp.] [DB:pir2] >gp: [GI:d1003836:g393297] [LN:BACUREA] [AC:D14439] [PN:urease accessory protein] [GN:UreE] [OR:Bacillus sp.] [SR:Bacillus sp. (strain:TB-90) DNA] [DB:genpept-bct1] [DE:Thermophilic Bacillus genes for urease subunits and ureaseaccessory proteins, complete cds.] [LE:2521] [RE:2967] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_3991557_f1_55 2771 6543 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4042327_c3_390 2772 6544 918 305 309 1.3e−27 Description gp: [GI:g1322222] [LN:HSU35735] [AC:U35735] [PN:RACH1] [GN:RACH1] [OR:Homo sapiens] [SR:human] [DB:genpept-pri2] [DE:Human RACH1 (RACH1) mRNA, complete cds.] [LE:169] [RE:1338] [DI:direct]. ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4086568_c3_381 2773 6545 1983 660 130 1.8e−07 Description sp: [LN:SOXS_ECOLI] [AC:P22539] [GN:SOXS] [OR:ESCHERICHIA COLI] [DE:REGULATORY PROTEIN SOXS] [SP:P22539] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_42500_f1_24 2774 6546 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4459380_f1_84 2775 6547 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_44595905_c2_343 2776 6548 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4486693_f2_92 2777 6549 804 267 976 2.8e−98 Description gp: [GI:e324856:g2226002] [LN:SXY14043] [AC:Y14043] [PN:glucose-1-dehydrogenase] [GN:gdh] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:Staphylococcus xylosus glcU and gdh genes.] [LE:1222] [RE:2013] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4491450_f2_150 2778 6550 873 290 310 1.0e−27 Description gp: [GI:g4980827] [LN:AE001714] [AC:AE001714:AE000512] [PN:transcriptional regulator, RpiR family] [GN:TM0326] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 26 of 136 of the complete genome.] [NT:similar to SP:P46118 PID:881368 GB:U00096] [LE:3706] [RE:4548] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4547163_f1_48 2779 6551 699 232 741 2.2e−73 Description sp: [LN:UREF_STAXY] [AC:P42876] [GN:UREF] [OR:STAPHYLOCOCCUS XYLOSUS] [DE:UREASE ACCESSORY PROTEIN UREF] [SP:P42876] [DB:swissprot] >gp: [GI:g511069] [LN:SXUREFG] [AC:Z35136] [PN:UreF] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S.xylosus (C2a) UreF and UreG genes.] [SP:P42876] [LE:79] [RE:648] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4569012_f1_79 2780 6552 588 195 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4720290_f2_145 2781 6553 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4720928_f1_11 2782 6554 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4726550_f2_143 2783 6555 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4800202_c1_269 2784 6556 621 206 694 2.1e−68 Description gp: [GI:g3955200] [LN:AF022796] [AC:AF022796] [PN:ModC] [GN:modC] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:ATP-binding protein of the molybdate-specific ABC] [LE:1578] [RE:2186] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4804153_f1_33 2785 6557 690 229 618 2.4e−60 Description gp: [GI:e1429636:g4756164] [LN:A67171] [AC:A67171] [FN:MOAC GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [NT:unnamed protein product] [LE:1846] [RE:2331] [DI:complement] >gp: [GI:g3955203] [LN:AF022796] [AC:AF022796] [PN:MoaC] [GN:moaC] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to MoaC of Escherichia coli] [LE:4067] [RE:4552] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4876675_f2_122 2786 6558 399 132 430 2.0e−40 Description sp: [LN:URE3_STAXY] [AC:P42875] [GN:UREA] [OR:STAPHYLOCOCCUS XYLOSUS] [EC:3.5.1.5] [DE:UREASE GAMMA SUBUNIT, (UREA AMIDOHYDROLASE)] [SP:P42875] [DB:swissprot] >pir: [LN:538483] [AC:538483] [PN:urease, 11K chain:urease gamma chain] [CL:urease 11K chain:urease 11K chain homology] [OR:Staphylococcus xylosus] [EC:3.5.1.5] [DB:pir2] >gp: [GI:g581787] [LN:SXUREABC] [AC:X74600] [PN:urease gamma subunit] [GN:ureA] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:S.xylosus gene for ureA, ureB, and ureC genes for urease gamma,beta and alpha subunits.] [SP:P42875] [LE:568] [RE:870] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4884662_c3_367 2787 6559 1128 375 333 1.0e−32 Description gp: [GI:e1393931:g4490992] [LN:5CE29] [AC:AL035707] [PN:putative salicylate hydroxylase] [GN:5CE29.14c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid E29.] [NT:5CE29.14c, possible salicylate hydroxylase, len:] [LE:19076] [RE:20338] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_4976687_c1_281 2788 6560 924 307 232 1.9e−19 Description gp: [GI:g4980727] [LN:AE001707] [AC:AE001707:AE000512] [PN:conserved hypothetical protein] [GN:TM0229] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 19 of 136 of the complete genome.] [NT:similar to GB:L77117 PID:1591686 percent identity:] [LE:5630] [RE:6487] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_5082812_c2_310 2789 6561 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_5087556_c2_335 2790 6562 849 282 990 9.2e−100 Description gp: [GI:el429618:g4756158] [LN:A67171] [AC:A67171] [FN:MOEB GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [NT:unnamed protein product] [LE:117] [RE:1118] [DI:direct] >gp: [GI:g395520l] [LN:AF022796] [AC:AF022796] [PN:MoeB] [GN:moeB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to the molybdopterin synthase] [LE:2338] [RE:3339] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_5113550_f2_149 2791 6563 1089 362 269 2.3e−23 Description pir: [LN:C70217] [AC:C70217] [PN:outer surface protein homolog] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp: [GI:g2689897] [LN:AE000792] [AC:AE000792] [PN:outer surface protein, putative] [GN:BBB07] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi plasmid cp26, complete plasmid sequence.] [NT:similar to GB:M88764 SP:Q09090 PID:469166] [LE:4769] [RE:5866] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_5266018_f2_160 2792 6564 771 256 415 7.8e−39 Description sp: [LN:YFIA_BACSU] [AC:P547l7] [GN:YFIA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 29.3 KD PROTEIN IN GLVG-GLVBC INTERGENIC REGION] [SP:P54717] [DB:swissprot] >pir: [LN:D69802] [AC:D69802] [PN:conserved hypothetical protein yfiA] [GN:yfiA] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1l82809:g2633l43] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfiA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:similar to hypothetical proteins] [SP:P54717] [LE:88122] [RE:88886] [DI:direct] >gp: [GI:d1009739:g1486242] [LN:D50543] [AC:D50543] [PN:unknown] [GN:yfiA] [FN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168, haplotype:haploid) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 76-degree region, complete cds.] [LE:1798] [RE:2562] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_5898328_f2_91 2793 6565 864 287 1102 1.2e−111 Description gp: [GI:e324855:g2226001] [LN:SXY14043] [AC:Y14043] [PN:glucose uptake protein] [GN:glcU] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:Staphylococcus xylosus glcU and gdh genes.] [LE:306] [RE:1172] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_6050010_c3_404 2794 6566 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_6757755_f2_121 2795 6567 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_6929676_c1_255 2796 6568 342 113 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_7031318_f2_153 2797 6569 339 112 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_7086677_c3_364 2798 6570 243 80 78 0.019 Description sp: [LN:LY4F_MOUSE] [AC:Q60653] [GN:LY49F:LY-49F:LY49-F] [OR:MUS MUSCULUS] [SR:,MOUSE] [DE:T-CELL SURFACE GLYCOPROTEIN LY-49F (LY49-F ANTIGEN)] [SP:Q60653] [DB:swissprot] >pir: [LN:149051] [AC:149051] [PN:Ly-49F-GE antigen] [OR:Mus musculus] [SR:, house mouse] [DB:pir2] >gp: [GI:g533492] [LN:MMU10092] [AC:U10092] [PN:Ly-49F-GE antigen] [OR:Mus musculus] [SR:house mouse] (DB:genpept-rod] [DE:Mus musculus C57BL/6 Ly-49F-GE antigen mRNA, complete cds.] [LE:81] [RE:881] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_818812_c2_337 2799 6571 1287 428 1560 3.6e−160 Description gp: [GI:e1429624:g4756160] [LN:A67171] [AC:A67171] [FN:MOEA GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [NT:unnamed protein product] [LE:2396] [RE:3655] [DI:direct] >gp: [GI:g3955204] [LN:AF022796] [AC:AF022796] [PN:MoeA] [GN:moeA] [OR:Staphylococcus carnosus] [DB genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to MoeA of Escherichia coli] [LE:4617] [RE:5876] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_829761_c1_288 2800 6572 2172 723 1751 2.1e−180 Description pir: [LN:H69724] [AC:H69724] [PN:DNA topoisomerase III topB] [GN:topB] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1020016:g1881236] [LN:AB001488] [AC:AB001488] [PN:PROBABLE DNA TOPOISOMERASE III] [GN:topB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [EC:5.99.1.2] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [LE:9617] [RE:11800] [DI:direct] >gp: [GI:e1182392:g2632726] [LN:BSUB0003] [AC:Z99106:AL009126] [PN:DNA topoisomerase III] [GN:topB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:5.99.1.2] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [LE:73361] [RE:75544] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_834686_c2_290 2801 6573 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_959427_f1_62 2802 6574 417 138 241 2.2e−20 Description gp: [GI:g2735506] [LN:5CU96107] [AC:U96107] [PN:SceB precursor] [GN:sceB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus N5,N10-methylenetetrahydromethanopterinreductase homolog, SceB precursor (sceB) and putative transmembraneprotein genes, complete cds, and putative Na+/H+ antiporter NhaC(nhaC) gene, partial cds.] [NT:major secreted protein] [LE:1894] [RE:2685] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_964077_c1_275 2803 6575 453 150 659 1.1e−64 Description gp: [GI:g3955206] [LN:AF022796] [AC:AF022796] [PN:MoaE] [GN:moaE] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] ENT:protein similar to MoaE of Escherichia coli] [LE:6352] [RE:6804] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_975061_c3_377 2804 6576 1455 484 916 6.4e−92 Description sp: [LN:YB07_HAEIN] [AC:Q57007:P96339] [GN:H11107] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL NA+/H+ ANTIPORTER H11107] [SP:Q57007:P96339] [DB:swissprot] >pir: [LN:164182] [AC:I64182] [PN:Na+/H+-exchanging protein homolog:Na+/H+ antiporter] [CL:Na+/H+-exchanging protein] [OR:Haemophilus influenzae] [DB:pir2] >gp: [GI:g1574661] [LN:U32790] [AC:U32790:L42023] [PN:Na+/H+ antiporter (nhaC)] [GN:H11107] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 105 of 163 of the completegenome.] [NT:similar to GB:M73530 SP:P27611 PID:143245] [LE:7526] [RE: 8932] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_9845631_f3_222 2805 6577 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_9928188_f1_39 2806 6578 132 43 95 0.00025 Description sp: [LN:NARQ_BACSU] [AC:P39756] [GN:NARQ:NARAA] [OR:BACILLUS SUBTILIS] [DE:NARQ PROTEIN] [SP:P39756] [DB:swissprot] >pir: [LN:B69665] [AC:B69665] [PN:required for formate dehydrogenase activity narQ] [GN:narQ] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e276834:g1648855] [LN:BSATPC] [AC:Z81356] [PN:unknown] [GN:narQ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis atpC gene.] [SP:P39756] [LE:7048] [RE:7836] [DI:direct] >gp: [GI:g580895] [LN:BSNAPAAB] [AC:Z352773 [PN:unknown] [GN:narAA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis (168) narA gene.] [SP:P39756] [LE:490] [RE:1278] [DI:direct] >gp: [GI:e1184577:g2636196] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:narQ] [FN:required for formate dehydrogenase activity] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: narAA] [SP:P39756] [LE:175331] [RE:176119] [DI:complement] >gp: [GI:e1184577:g2636196] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:narQ] [FN:required for formate dehydrogenase activity] [OR:Bacillus subtilis] EDB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: narAA] [SP:P39756] [LE:175331] [RE:176119] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_9928500_c1_270 2807 6579 261 86 286 3.7e−25 Description gp: [GI:e1429618:g4756158] [LN:A67171] [AC:A67171] [FN:MOEB GENE] [OR:Staphylococcus carnosus] [DB:genpept-pat] [DE:Sequence 11 from Patent EP0805205.] [NT:unnamed protein product] [LE:117] [RE:1118] [DI:direct] >gp: [GI:g3955201] [LN:AF022796] [AC:AF022796] [PN:MoeB] [GN:moeB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus molybdenum cofactor biosynthetic genecluster, complete sequence.] [NT:protein similar to the molybdopterin synthase] [LE:2338] [RE:3339] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000997_9977318_f1_75 2808 6580 1437 478 700 4.9e−69 Description pir: [LN:D65017] [AC:D65017] [PN:hypothetical protein b2429] [CL:phosphotransferase system sucrose-specific enzyme II, factor II] [OR:Escherichia coli] [DB:pir2] >gp: [GI:d1017042:g1799859] [LN:D90872] [AC:D90872:AB001340] [PN:PTS SYSTEM, SUCROSE-SPECIFIC IIBC COMPONENT] [GN:IPA-49D] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E.coli genomic DNA, Kohara clone #419(54.7–55.1 min.).] [NT:similar to [SwissProt Accession Number P05306] ] [LE:9801] [RE:11225] [DI:direct] >gp: [GI:d1017045:g1799863] [LN:D90873] [AC:D90873:AB001340] [PN:PTS SYSTEM, SUCROSE-SPECIFIC IIBC COMPONENT] [GN:IPA-49D] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E.coli genomic DNA, Kohara clone #420(54.9–55.2 min.).] [NT:similar to [SwissProt Accession Number P05306] ] [LE:611] [RE:2035] [DI:direct] >gp: [GI:g1788769] [LN:AE000330] [AC:AE000330:U00096] [PN:putative PTS enzyme II] [GN:b2429] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 220 of 400 of the completegenome.] [NT:o474; 33 pct identical (29 gaps) to 436 residues] [LE:5237] [RE:6661] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_10159760_f1_50 2809 6581 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_10312805_f3_197 2810 6582 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_10646950_c1_238 2811 6583 1221 406 1151 8.0e−117 Description pir: [LN:A69974] [AC:A69974] [PN:cystathionine gamma-synthase homolog yrhB] [GN:yrhB] [CL:O-succinylhomoserine (thiol)-lyase] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:g1934606] [LN:BSU93874] [AC:U93874] [PN:cystathionine gamma-lyase] [GN:yrhB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis cysteine synthase (yrhA), cystathioninegamma-lyase (yrhB), YrhC (yrhC), YrhD (yrhD), formate dehydrogenasechain A (yrhE), YrhF (yrhF), formate dehydrogenase (yrhG), YrhH(yrhH), regulatory protein (yrhI), cytochrome P450 102 (yrhJ), YrhK(yrhK), hypothetical protein YrhL (yrhL), putative anti-SigV factor(yrhM), RNA polymerase sigma factor SigV (sigV) and YrhO (yrhO)genes, complete cds, and YrhP (yrhP) gene, partial cds.] [NT:similar to Rattus norvegicus cystathionine] [LE:986] [RE:2125] [DI:direct] >gp: [GI:e1183955:g2635171] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrhB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451to 2812870.] [NT:similar to cystathionine gamma-synthase] [LE:184821] [RE:185960] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_10723177_f1_59 2812 6584 255 84 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7303000998_11213532_c3_351 2813 6585 246 81 90 0.00022 Description gp: [GI:g208931] [LN:SYNORFLAC] [AC:M15619] [OR:synthetic construct] [SR:E.coli (strain SE5000) synthetic DNA, clone pKB1] [DB:genpept-syn] [DE:Synthetic E.coli ORF16/lacZ fusion protein, partial cds.] [NT:ORF16-lacZ fusion protein] [LE:29] [RE:>232] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_1178785_c3_323 2814 6586 939 312 731 2.6e−72 Description pir: [LN:H69973] [AC:H69973] [PN:cysteine synthase homolog yrhA] [GN:yrhA] [CL:threonine dehydratase] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:g1934605] [LN:BSU93874] [AC:U93874] [PN:cysteine synthase] [GN:yrhA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis cysteine synthase (yrhA), cystathioninegamma-lyase (yrhB) , YrhC (yrhC) , YrhD (yrhD) , formate dehydrogenasechain A (yrhE) , YrhF (yrhF) , formate dehydrogenase (yrhG) , YrhH(yrhH) , regulatory protein (yrhI) , cytochrome P450 102 (yrhJ) , YrhK(yrhK) , hypothetical protein YrhL (yrhL) , putative anti-SigV factor(yrhM) , RNA polymerase sigma factor SigV (sigV) and YrhO (yrhO)genes, complete cds, and YrhP (yrhP) gene, partial cds.] [NT:similar to cysteine synthase from Spinacia] [LE:61] [RE:984] [DI:direct] >gp: [GI:e1183956:g2635172] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrhA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451to 2812870.] [NT:similar to cysteine synthase] [LE:185962] [RE:186885] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_11931540_f2_96 2815 6587 825 274 786 3.8e−78 Description sp: [LN:YLAC_STAXY] [AC:033812] [OR:STAPHYLOCOCCUS XYLOSUS] [DE:HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN LACR 5′REGION (FRAGMENT)] [SP:033812] [DB:swissprot] >gp: [G1:e352090:g2462703] [LN:SXLACRPH] [AC:Y14599] [PN:transcriptional regulator from the LysR-type] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:Staphylococcus xylosus lacR, lacP, lacH genes and 2 ORF's.] [NT:ORF1] [SP:033812] [LE:<1] [RE:814] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_1256387_c2_297 2816 6588 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_12603166_f2_86 2817 6589 303 100 100 1.9e−05 Description pir: [LN:G7l244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp: [GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN: 106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7) .] [LE:191072] [RE:191392] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_126068_f1_46 2818 6590 555 184 164 3.4e−11 Description pir: [LN:A71661] [AC:A71661] [PN:hypothetical protein RP563] [GN:RP563] [OR:Rickettsia prowazekii] [DB:pir2] >gp: [GI:e1342855:g3861111] [LN:RPXX03] [AC:AJ235272:AJ235269] [PN:unknown] [GN:RP563] [OR:Rickettsia prowazekii] [DB:genpept-bct1] [DE:Rickettsia prowazekii strain Madrid E, complete genome; segment3/4.] [LE:110476] [RE:112242] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_13089052_f3_214 2819 6591 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_13678300_c2_267 2820 6592 1233 410 1393 1.8e−142 Description pir: [LN:B69760] [AC:B69760] [PN:conserved hypothetical protein yciC] [GN:yciC] [CL:conserved hypothetical protein yciC] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1182288:g2632622] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:yciC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:similar to hypothetical proteins] [LE:170984] [RE:172177] [DI:direct] >gp: [GI:d1009605:g1805408] [LN:D50453] [AC:D50453] [PN:homologues to nitrile hydratase region] [GN:yciC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:45287] [RE:46480] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_13912712_c3_312 2821 6593 150 49 52 0.015 Description sp: [LN:IMM1_ECOLI] [AC:P02985] [GN:IMM] [OR:ESCHERICHIA COLI] [DE:COLICIN E1 IMMUNITY PROTEIN (IMME1) (MICROCIN E1 IMMUNITY PROTEIN)] [SP:P02985] [DB:swissprot] >gp: [GI:g455140] [LN:CE1CEA] [AC:M12543] [OR:Plasmid ColE1] [SR:Plasmid ColE1 (a colicin-producing derivative strain from E.col] [DB:genpept-bct1] [DE:Plasmid ColE1 cea (3′ end), imm and lys genes (complete cds) .] [NT:immunity protein] [LE:32] [RE:373] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_13923427_f3_196 2822 6594 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_14218805_c2_301 2823 6595 129 42 80 0.0095 Description sp: [LN:TRER_BACSU] [AC:P39796] [GN:TRER] [OR:BACILLUS SUBTILIS] [DE:TREHALOSE OPERON TRANSCRIPTIONAL REPRESSOR] [SP:P39796] [DB:swissprot] >pir: [LN:JC5038] [AC:JC5038:567931:D69725:I40499:567866] [PN:transcription repressor of trehalose operon treR] [GN:treR] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:g1000453] [LN:BSTREAPR] [AC:Z54245] [PN:TreR] [GN:treR] [FN:repressor of the trehalose operon] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis treA, treP and treR genes.] [NT:position 3684 corresponds to position 2543 of] [SP:P39796] [LE:3352] [RE:4068] [DI:direct] >gp: [GI:e1182772:g2633106] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:transcriptional regulator (GntR family)] [GN:treR] [FN:negative regulation of the trehalose operon] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to1011250.] [NT:alternate gene name: yfxA] [SP:P39796] [LE:50243] [RE:50959] [DI:direct] >gp: [GI:d1024286:g2626829] [LN:D83967] [AC:D83967] [PN:TreR] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 74 degree region.] [LE:16962] [RE:17678] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_14271068_f1_51 2824 6596 261 86 68 0.018 Description sp: [LN:PROP_ECOLI] [AC:P30848] [GN:PROP] [OR:ESCHERICHIA COLI] [DE:PROLINE/BETAINE TRANSPORTER (PROLINE PORTER II) (PPII)] [SP:P30848] [DB:swissprot] >pir: [LN:532331] [AC:S32331:S56339:F65220] [PN:proline/betaine transport protein:proline permease II:proline porter II] [GN:proP] [CL:citrate utilization determinant] [OR:Escherichia coli] [DB:pir2] [MP:93 min] >gp: [GI:g147357] [LN:ECOPROBETT] [AC:M83089] [PN:a proline/betaine transporter] [GN:proP] [FN:active uptake of proline or betaine] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E. coli proline/betaine transporter (proP) gene, complete cds.] [NT:Evidence that this open reading frame encodes a] [LE:433] [RE:1935] [DI:direct] >gp: [GI:g536955] [LN:ECOUW93] [AC:U14003] [GN:proP] [FN:active uptake of proline or betaine] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [NT:CG Site No. 361] [LE:21331] [RE:22833] [DI:direct] >gp: [GI:g1790550] [LN:AE000483] [AC:AE000483:U00096] [PN:low-affinity transport system; proline permease] [GN:proP] [FN:transport; Transport of small molecules: Amino] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 373 of 400 of the completegenome.] [NT:o500; 100 pct identical to PROP_ECOLI SW: P30848;] [LE:5301] [RE:6803] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_14460882_c1_217 2825 6597 1695 564 1304 4.9e−133 Description gp: [GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, completecds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_14485686_c2_287 2826 6598 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_15022153_f1_73 2827 6599 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_15900305_f3_177 2828 6600 789 262 78 0.019 Description gp: [GI:g453517] [LN:TETRRTRNA] [AC:L28677] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Mitochondrion Tetrahymena pyriformis (strain ST, organell] (DB:genpept-inv1] [DE:Tetrahymena pyriformis ribosomal RNA; tRNA-Trp; ORF 1–4; tRNA-Glu;cytochrome oxidase subunit 1; NADH dehydrogenase; ribosomal proteinLl4.] [NT:ORF3] [LE:4384] [RE:4680] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_16196963_f2_133 2829 6601 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_16257665_f1_37 2830 6602 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_16281286_c3_322 2831 6603 1359 452 1059 4.5e−107 Description pir: [LN:F69825] [AC:F69825] [PN:sodium-dependent transporter homolog yhdH] [GN:yhdH] [CL:gamma-aminobutyric acid transporter] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1l82948:g2633282] [LN:BSUBQ0006] [AC:Z99109:AL009126] [GN:yhdH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to1209940.] [NT:similar to sodium-dependent transporter] [LE:24845] [RE:26200] [DI:direct] >gp: [GI:e1191879:g2226203] [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees: spoVRto sspB.] [NT:Similarity to sodium dependent transporters;] [LE:11493] [RE:12848] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_19712762_c3_347 2832 6604 600 199 813 5.2e−81 Description sp: [LN:RECR_BACSU] [AC:P24277] [GN:RECR:RECM:RECD] [OR:BACILLUS SUBTILIS] [DE:RECOMBINATION PROTEIN RECR] [SP:P24277] [DB:swissprot] >pir: [LN:B69691] [AC:B69691:S13788:S66051] [PN:DNA repair and genetic recombination recR:recM protein] [GN:recR] [CL:recR protein] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:dl005799:g467411] [LN:BAC180K] [AC:D26185] [PN:recombination protein] [GN:recR] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:92467] [RE:93063] [DI:direct] >gp: [GI:g453239] [LN:BSRECM] [AC:X17014] [GN:recR] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis dnaZX and recR genes and two unidentified readingframes.] [SP:P24277] [LE:2314] [RE:2910] [DI:direct] >gp: [GI:e1181954:g2632288] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:recR] [FN:DNA repair and genetic recombination] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: recM] [SP:P24277] [LE:28865] [RE:29461] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_19960162_c1_232 2833 6605 2631 876 1785 5.2e−184 Description pir: [LN:E69745] [AC:E69745] [PN:hypothetical protein ybcD] [GN:ybcD] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1182118:g2632452] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybcD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [LE:207166] [RE:209430] [DI:direct] >gp: [GI:e1182136:g2632470] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ybcD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [LE:12516] [RE:14780] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_20093_c3_311 2834 6606 306 101 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_20314005_c3_335 2835 6607 4590 1529 4186 0.0 Description sp: [LN:GLTB_BACSU] [AC:P39812] [GN:GLTB:GLTA] [OR:BACILLUS SUBTILIS] [EC:1.4.1.13] [DE:GLUTAMATE SYNTHASE [NADPH] LARGE CHAIN, (NADPH-GOGAT)] [SP:P39812] [DB:swissprot] >pir: [LN:G69634] [AC:G69634] [PN:glutamate synthase (large subunit) gltA] [GN:gltA] [CL:glutamate synthase (NADPH)] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1183503:g2634228] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:glutamate synthase (large subunit)] [GN:gltA] [FN:glutamate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.4.1.13] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201to 2014980.] [SP:P39812] [LE:228126] [RE:232688] [DI:complement] >gp: [GI:e1185318:g2634239] [LN:BSUB0011] [AC:Z99114:AL009126] [PN:glutamate synthase (large subunit)] [GN:gltA] [FN:glutamate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.4.1.13] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [SP:P39812] [LE:9156] [RE:13718] [DI: complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_203886_f2_137 2836 6608 159 52 116 2.8e−06 Description gp: [GI:g2689564] [LN:U93688] [AC:U93688] [PN:integrase] [GN:int] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst) ,enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:similar to staphylococcal phage integrase] [LE:13871] [RE:15091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_20602262_c2_303 2837 6609 543 180 105 0.00015 Description sp: [LN:YHBS_ECOLI] [AC:P45473] [GN:YHBS] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 18.5 KD PROTEIN IN SOHA-MTR INTERGENIC REGION (F167)] [SP:P45473] [DB:swissprot] >pir: [LN:H65105] [AC:H65105] [PN:hypothetical protein b3156] [OR:Escherichia coli] [DB:pir2] >gp: [GI:g606096] [LN:ECOUW67] [AC:U18997] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes.] [NT:ORF_f167; end overlaps end of o100 by 14 bases;] [LE:81007] [RE:81510] [DI:complement] >gp: [GI:g1789546] [LN:AE000396] [AC:AE000396:U00096] [PN:orf, hypothetical protein] [GN:yhbS] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 286 of 400 of the completegenome.] [NT:f167; f167; end overlaps end of 0100 by 14] [LE:6918] [RE:7421] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_20602263_c2_270 2838 6610 1512 503 1414 1.1e−144 Description sp: [LN:NDHF_BACSU] [AC:P39755] [GN:NDHF] [OR:BACILLUS SUBTILIS] [EC:1.6.5.3] [DE:OXIDOREDUCTASE CHAIN 5)] [SP:P39755] [DB:swissprot] >pir: [LN:C69666] [AC:C69666] [PN:NADH dehydrogenase (subunit 5) ndhF] [GN:ndhF] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1034042:g3599601] [LN:AB006424] [AC:AB006424] [PN:NADH DEHYDROGENASE SUBUNIT 5] [GN:ndhF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23degree.] [LE:8378] [RE:9895] [DI:direct] >gp: [GI:g903587] [LN:BSU28323] [AC:U28323] [PN:NADH dehydrogenase subunit 5] [GN:ndhF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis NADH dehydrogenase subunit 5 (ndhF) gene,complete cds.] [LE:519] [RE:2036] [DI:direct] >gp: [GI:e1182116:g2632450] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:NADH dehydrogenase (subunit 5)] [GN:ndhF] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.6.5.3] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: ybxE] [SP:P39755] [LE:205395] [RE:206912] [DI:direct] >gp: [GI:e1182134:g2632468] [LN:BSUB0002] [AC:Z99105:AL009126] [PN:NADH dehydrogenase (subunit 5)] [GN:ndhF] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.6.5.3] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [NT:alternate gene name: ybxE] [SP:P39755] [LE:10745] [RE:12262] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_2142316_f3_207 2839 6611 213 70 52 0.040 Description gp: [GI:e1287275:g3063696] [LN:ATF4D11] [AC:AL022537] [PN:putative protein] [GN:F4D11.60] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln1] [DE:Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAIIproject) .] [NT:contains EST gb:W43721] [LE:21418:21729:22060] [RE:21537:22004:22174] (DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_21516287_f1_2 2840 6612 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_2195338_c3_342 2841 6613 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_22305342_f3_205 2842 6614 543 180 162 8.7e−11 Description gp: [GI:g4019275] [LN:AF083424] [AC:AF083424] [OR:Ateline herpesvirus 3] [DB:genpept-vr1] [DE:Ateline herpesvirus 3 complete genome.] [NT:orf 48] [LE:62159] [RE:64537] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_22437751_c3_307 2843 6615 489 162 160 5.5e−11 Description pir: [LN:T03492] [AC:T03492] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:pir2] [MP:1] >gp: [GI:g3128293] [LN:AF010496] [AC:AF010496] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:genpept-bct2] [DE:Rhodobacter capsulatus strain SB1003, partial genome.] [LE:54291] [RE:55613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_22459802_f2_135 2844 6616 156 51 117 1.0e−06 Description gp: [GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, completecds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_22688428_c3_348 2845 6617 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_23484678_c2_304 2846 6618 1731 576 1263 1.1e−128 Description pir: [LN:S13786] [AC:S13786:S00745:S66049:B69618] [PN:DNA-directed DNA polymerase, III chain dnaX:DNA polymerase III (gamma and tau subunits) dnax] [GN:dnaX:dnaZX] [OR:Bacillus subtilis] [EC:2.7.7.7] [DB:pir2] >gp: [GI:dl005797:g467409] [LN:BAC180K] [AC:D26185] [PN:DNA polymerase III subunit] [GN:dnaH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:90414] [RE:92105] [DI:direct] >gp: [GI:g580914] [LN:BSRECM] [AC:X17014] [GN:dnaZX] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis dnaZX and recR genes and two unidentified readingframes.] [SP:P09122] [LE:261] [RE:1952] [DI:direct] >gp: [GI:e1181952:g2632286] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:DNA polymerase III (gamma and tau subunits)] [GN:dnaX] [FN:DNA synthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.7.7] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [NT:alternate gene name: dnaH, dna-8132] [SP:P09122] [LE:26812] [RE:28503] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_23556500_f1_33 2847 6619 282 93 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_2359675_c3_329 2848 6620 141 46 68 0.047 Description pir: [LN:S72295] [AC:S72295] [PN:ribosomal protein S8] [GN:rps8] [OR:plastid Plasmodium falciparum] LDB:pir2] >gp: [GI:e220199:g1171601] [LN:PFCOMPIRB] [AC:X95276] [GN:rps8] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:P.falciparum complete gene map of plastid-like DNA (IR-B) .] [LE:5492] [RE:5878] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_23631262_f2_94 2849 6621 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_23994687_f1_45 2850 6622 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24016916_c3_341 2851 6623 1044 347 396 8.1e−37 Description sp: [LN:YEIH_ECOLI] [AC:P33019] [GN:YEIH] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 36.9 KD PROTEIN IN LYSP-NFO INTERGENIC REGION] [SP:P33019] [DB:swissprot] >pir: [LN:E64984] [AC:E64984] [PN:hypothetical 36.9 kD protein in lysP-nfo intergenic region] [GN:yeiH] [OR:Escherichia coli] [DB:pir2] >gp: [GI:g405879] [LN:ECOHU47] [AC:U00007] [PN:yeiH] [OR:Escherichia coli] [SR:Escherichia coli K12 BHB2600] [DB:genpept-bct1] [DE:47 to 48 centisome region of E.coli K12 BHB2600.] [LE:57462] [RE:58511] [DI:direct] >gp: [GI:g1788482] [LN:AE000305] [AC:AE000305:U00096] [PN:orf, hypothetical protein] [GN:yeiH] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 195 of 400 of the completegenome.] [NT:o349; 100 pct identical to YEIH_ECOLI SW: P33019] [LE:2831] [RE:3880] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24220967_c1_228 2852 6624 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24227192_c3_343 2853 6625 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24235626_c1_257 2854 6626 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24272337_f3_204 2855 6627 432 143 96 0.0025 Description pir: [LN:D69633] [AC:D69633] [PN:glutamine ABC transporter (glutamine-binding protein) ginH] [GN:glnH] [CL:lysine-arginine-ornithine-binding protein] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1183973:g2635189] [LN:BSUB0014] [AC:Z99117:AL009126] [PN:glutamine ABC transporter (glutamine-binding] [GN:glnH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21) from 2599451to 2812870.] [LE:202928] [RE:203749] [DI:direct] >gp: [GI:e1183991:g2635207] [LN:BSUB0015] [AC:Z99118:AL009126] [PN:glutamine ABC transporter (glutamine-binding] [GN:glnH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 15 of 21): from 2795131to 3013540.] [LE:7248] [RE:8069] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24350953_f1_6 2856 6628 132 43 72 0.017 Description pir: [LN:G71244] [AC:G71244] [PN:hypothetical protein PH0217] [GN:PH0217] [OR:Pyrococcus horikoshii] [DB:pir2] >gp: [GI:d1030229:g3256603] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:106aa long hypothetical protein] [GN:PH0217] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7) .] [LE:191072] [RE:191392] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24390937_f3_198 2857 6629 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24391885_f3_178 2858 6630 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24475252_f3_213 2859 6631 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_24664802_c1_234 2860 6632 747 248 380 4.0e−35 Description pir: [LN:H70027] [AC:H70027] [PN:carboxylesterase homolog yvaK] [GN:yvaK] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1186050:g2635875] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvaK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551to 3609060.] [NT:similar to carboxylesterase] [LE:53733] [RE: 54479] [DI: complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_25422288_c2_277 2861 6633 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_25442803_c2_306 2862 6634 261 86 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_25586693_c3_346 2863 6635 333 110 374 1.7e−34 Description sp: [LN:YAAK_BACSU] [AC:P24281] [GN:YAAK] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 11.8 KD PROTEIN IN DNAZ-RECR INTERGENIC REGION] [SP:P24281] [DB:swissprot] >pir: [LN:S13787] [AC:S13787:S66050:C69737] [PN:conserved hypothetical protein yaaK] [GN:yaaK] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1005798:g467410] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:92129] [RE:92452] [DI:direct] >gp: [GI:g40073] [LN:BSRECM] [AC:X17014] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis dnaZX and recR genes and two unidentified readingframes.] [NT:ORF107] [SP:P24281] [LE:1976] [RE:2299] [DI:direct] >gp: [GI:e1181953:g2632287] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:yaaK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 t0213080.] [NT:similar to hypothetical proteins] [SP:P24281] [LE:28527] [RE:28850] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_256468_c2_294 2864 6636 330 109 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_26460887_f1_34 2865 6637 1524 507 366 6.4e−32 Description sp: [LN:TAGE_BACSU] [AC:P13484] [GN:TAGE:RODD:GTAA] [OR:BACILLUS SUBTILIS] [EC:2.4.1.52] [DE:(EC 2.4.1.52) (TEICHOIC ACID BIOSYNTHESIS PROTEIN E)] [SP:P13484] [DB:swissprot] >pir: [LN:506048] [AC:506048:F69720] [PN:poly(glycerol-phosphate) alpha-glucosyltransferase, tagE:probable rodD protein:UDP-glucose- -polyglycerol phosphate glucosyltransferase tagE] [GN:tagE:rodD] [OR:Bacillus subtilis] [EC: 2.4.1.52] [DB:pir2] [MP:310 degrees] >gp: [GI:g580920] [LN:BSRODC] [AC:X15200] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis rodC operon.] [NT:rodD (gtaA) polypeptide (AA 1–673)] [SP:P13484] [LE:157] [RE:2178] [DI:direct] >gp: [GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] >gp: [GI:e1184479:g2636099] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:UDP-glucose:polyglycerol phosphate] [GN:tagE] [FN:teichoic acid biosynthesis] [OR:Bacillus subtilis] [DB:genpept] (EC:2.4.1.52] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:alternate gene name: rodD, gtaA, gtaD] [SP:P13484] [LE:80369] [RE:82390] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_26776562_c3_317 2866 6638 399 132 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_2769816_f3_206 2867 6639 135 44 135 2.5e−08 Description gp: [GI:g2689564] [LN:U93688] [AC:U93688] [PN:integrase] [GN:int] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst) ,enterotoxin Cent), and integrase (int) genes, complete cds.] [NT:similar to staphylococcal phage integrase] [LE:13871] [RE:15091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_30265952_c2_291 2868 6640 387 128 118 2.3e−07 Description pir: [LN:H69029] [AC:H69029] [PN:mutator MutT related protein] [GN:MTH122] [CL:mutT domain homology] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp: [GI:g2621161] [LN:AE000801] [AC:AE000801:AE000666] [PN:mutator MutT related protein] [GN:MTH122] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct1] [DE:Methanobacterium thermoautotrophicum from bases 68653 to 79584 (section 7 of 148) of the complete genome.] [NT:Function Code:10.09 - Metabolism of Macromolecules,] [LE:9193] [RE:9660] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_30682802_c3_321 2869 6641 261 86 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_33399055_c2_273 2870 6642 393 130 419 3.0e−39 Description pir: [LN:H69745] [AC:H69745] [PN:hypothetical protein ybcI] [GN:ybcI] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1034047:g3599606] [LN:AB006424] [AC:AB006424] [GN:ybcI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA, 70 kb region between 17 and 23degree.] [LE:13549] [RE:13923] [DI:direct] >gp: [GI:e1182121:g2632455] [LN:BSUB0001] [AC:Z99104:AL009126] [GN:ybcI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to213080.] [LE:210558] [RE:210932] [DI:direct] >gp: [GI:e1182139:g2632473] [LN:BSUB0002] [AC:Z99105:AL009126] [GN:ybcI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 2 of 21): from 194651 to415810.] [LE:15908] [RE:16282] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_33756432_f1_7 2871 6643 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_34407625_c3_309 2872 6644 354 117 587 4.7e−57 Description gp: [GI:g1658281] [LN:SLU74623] [AC:U74623] [PN:CadX] [FN:cadmium resistance] [OR:Staphylococcus lugdunensis] [DB:genpept-bct1] [DE:Staphylococcus lugdunensis strain 995 cadmium resistance plasmidpLUG10, complete sequence.] [LE:2624] [RE:2971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_34557262_c3_349 2873 6645 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_35431657_f2_114 2874 6646 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_36227142_c1_240 2875 6647 993 330 409 3.4e−38 Description sp: [LN:LYTE_BACSU] [AC:P54421] [GN:LYTE:PAPQ] [OR:BACILLUS SUBTILIS] [DE:PAPQ PRECURSOR) (CELL WALL-ASSOCIATED POLYPEPTIDE CWBP33)] [SP:P54421] [DB:swissprot] >gp: [GI:g1488662] [LN:BSU38819] [AC:U38819] [PN:phosphatase-associated protein] [GN: lytE] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis phosphatase-associated protein (lytE) gene,complete cds.] [NT:Muralytic when cloned in E.coli; Iap60 homolog;] [LE:443] [RE:1447] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_36568828_c2_266 2876 6648 1050 349 984 4.0e−99 Description pir: [LN:A43577] [AC:A43577] [PN:regulatory protein pfoR] [OR:Clostridium perfringens] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_36593802_c2_282 2877 6649 867 288 454 5.8e−43 Description sp: [LN:PLPA_PASHA] [AC:Q08868:Q07363] [GN:PLPA] [OR:PASTEURELLA HABMOLYTICA] [DE:OUTER MEMBRANE LIPOPROTEIN 1 PRECURSOR (PLP1)] [SP:Q08868:Q07363] [DB:swissprot] >pir: [LN:JN0751] [AC:JN0751] [PN:Outer membrane 30K protein:ORF1] [CL:lipoprotein-28] [OR:Pasteurella haemolytica] [DB:pir2] >gp: [GI:g349530] [LN:PASLIPOPR] [AC:L11037] [PN:lipoprotein] [OR:Pasteurella haemolytica] [SR:Pasteurella haemolytica (strain A1) DNA] [DB:genpept-bct1] [DE:Pasteurella haemolytica lipoprotein gene, complete cds.] [NT:precursor] [LE:171] [RE:1004] [DI:direct] >gp: [GI:g150508] [LN:PASLIPOPRO] [AC:M91072] [PN:lipoprotein] [OR:Pasteurella haemolytica] [SR:Pasteurella haemolytica (strain A1) (library: pUCl9 of R. Craven e] [DB:genpept-bct1] [DE:Pasteurella haemolytica (clones pGEB2830,pBRES2830) lipoproteingene, complete cds.] [LE:136] [RE:969] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_3944143_c3_308 2878 6650 627 208 971 9.5e−98 Description gp: [GI:g1916729] [LN:AF134905] [AC:AF134905:U76550] [PN:CadD] [GN:cadD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pRW001 CadD (cadD) gene, completecds.] [NT:confers low level cadmium resistance] [LE:2328] [RE:2957] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_3945253_f3_203 2879 6651 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_3954385_f1_32 2880 6652 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4064818_c1_239 2881 6653 675 224 533 2.5e−51 Description sp: [LN:YAEE_ECOLI] [AC:P31547] [GN:YAEE] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YAEE] [SP:P31547] [DB:swissprot] >pir: [LN:F64744] [AC:F64744] [PN:probable transport protein yaeE] [GN:yaeE] [CL:probable transport protein yaeE] [OR:Escherichia coli] [DB:pir2] >gp: [GI:d1041643:g4902941] [LN:ECOTSF] [AC:D83536] [PN:Hypothetical 23.3 kd protein in rcsF-abc] [GN:yaeE] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (4.1–6.1 min) .] [NT:ORF_ID:o124#1; similar to SwissProt Accession] [LE:30521] [RE:31174] [DI:complement] >gp: [GI:g1552774] [LN:ECU70214] [AC:U70214] [GN:yaeE] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli chromosome minutes 4–6.] [NT:hypothetical] [LE:52043] [RE:52696] [DI:complement] >gp: [GI:g1786397] [LN:AE000129] [AC:AE000129:U00096] [PN:putative transport system permease protein] [GN:yaeE] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 19 of 400 of the completegenome.] [NT:f218; 100 pct identical to YAEE_ECOLI SW: P31547] [LE:944] [RE:1597] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4082828_c3_320 2882 6654 702 233 211 3.3e−17 Description pir: [LN:F71886] [AC:F71886] [PN:hypothetical protein jhp0787] [GN:jhp0787] [OR:Helicobacter pylori] [SR:strain J99, , strain J99] [SR:strain J99,] [DB:pir2] >gp: [GI:g4155367] [LN:AE001509] [AC:AE001509:AE001439] [PN:putative] [GN:jhp0787] [OR:Helicobacter pylori J99] [DB:genpept-bct2] [DE:Helicobacter pylori, strain J99 section 70 of 132 of the completegenome.] [NT:similar to H. pylori 26695 gene HP0851] [LE:2708] [RE:3394] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4101525_f1_60 2883 6655 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4328468_c2_298 2884 6656 1473 490 1279 2.2e−130 Description pir: [LN:H69634] [AC:H69634] [PN:glutamate synthase (small subunit) gltB] [GN:gltB] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1183502:g2634227] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:glutamate synthase (small subunit)] [GN:gltB] [FN:glutamate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.4.1.13] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201to 2014980.] [LE:226628] [RE:228109] [DI:complement] >gp: [GI:e1185317:g2634238] [LN:BSUB0011] [AC:Z99114:AL009126] [PN:glutamate synthase (small subunit)] [GN:gltB] [FN:glutamate biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.4.1.13] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [LE:7658] [RE:9139] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4335766_c1_261 2885 6657 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4344011_f3_152 2886 6658 252 83 60 0.023 Description gp: [GI:d1036760:g4062561] [LN:D90737] [AC:D90737:AB001340] [PN:4-hydroxyphenylacetate 3-monooxygenase (EC] [GN nmoB] [OR:Escherichia coli] [SR:Escherichia coli(strain:K12) DNA, clone:Kohara clone #227] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (22.8–23.1 min) .] [NT:ORF_ID:o228#5; similar to PIR Accession Number] [LE:15357] [RE:15932] [DI:complement] >gp: [GI:d1036770:g4062570] [LN:D90738] [AC:D90738:AB001340] [PN:4-hydroxyphenylacetate 3-monooxygenase (EC] [GN:nmoB] [OR:Escherichia coli] [SR:Escherichia coli(strain:K12) DNA, clone:Kohara clone #228] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (23.0–23.4 min) .] [NT:ORF_ID:o228#5; similar to PIR Accession Number] [LE:3821] [RE:4396] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4485682_f3_159 2887 6659 264 87 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4580132_f1_72 2888 6660 171 56 161 3.6e−11 Description gp: [GI:g2689564] [LN:U93688] [AC:U93688] [PN:integrase] [GN:int] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus toxic shock syndrome toxin-1 (tst),enterotoxin (ent), and integrase (int) genes, complete cds.] [NT:similar to staphylococcal phage integrase] [LE:13871] [RE:15091] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4703167_f1_44 2889 6661 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_4703512_c3_315 2890 6662 486 161 335 2.4e−30 Description pir: [LN:A70068] [AC:A70068 ] [PN:conserved hypothetical protein ywqN] [GN:ywqN] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1184521:g2636140] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywqN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to hypothetical proteins] [LE:124753] [RE:125298] [DI:complement] >gp: [GI:e308071:g1894752] [LN:BSZ92952] [AC:Z92952] [PN:unknown] [GN:ywqN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis ywq[A,B,C,D,E,F,G,H,I,J,K,L,M,N,O] genes.] [LE:13028] [RE:13573] [DI:direct] >gp: [GI:e1184521:g2636140] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywqN] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [NT:similar to hypothetical proteins] [LE:124753] [RE:125298] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_47343_c1_219 2891 6663 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_5265643_f1_30 2892 6664 1122 373 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_5343760_f2_129 2893 6665 267 88 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_5860927_f2_138 2894 6666 189 62 75 0.023 Description gp: [GI:e1283542:g4455153] [LN:ATF6I18] [AC:ALO22198] [PN:putative protein] [GN:F6I18.10] [OR:Arabidopsis thaliana] [SR:thale cress] [DB:genpept-pln1] [DE:Arabidopsis thaliana DNA chromosome 4, BAC clone F6118 (ESSAIIproject) .] [NT:contains EST gb:T22575, T22317] [LE:>199:404:631] [RE:347:548:921] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6052175_f1_65 2895 6667 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6053437_c3_310 2896 6668 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6251262_f3_146 2897 6669 189 62 75 0.0084 Description gp: [GI:d1044717:g5105618] [LN:AP000062] [AC:AP000062] [PN:121aa long hypothetical protein] [GN:APE1925] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 5/7.] [NT:similar to OWL:AB00947213 percent identity:62.500] [LE:233017] [RE:233382] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_657678_f3_208 2898 6670 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6698526_c2_264 2899 6671 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6743788_c2_272 2900 6672 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6760887_f3_174 2901 6673 924 307 333 3.8e−30 Description sp: [LN:GLTC_BACSU] [AC:P20668] [GN:GLTC] [OR:BACILLUS SUBTILIS] [DE:TRANSCRIPTIONAL REGULATORY PROTEIN GLTC] [SP:P20668] [DB:swissprot] >pir: [LN:A69635] [AC:A69635:A33951:A61642] [PN:transcription activator of glutamate synthase operon gltC:regulatory protein gltC] [GN:gltC] [CL:probable transcription regulator lsyR] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1183504:g2634229] [LN:BSUB0010] [AC:Z99113:AL009126] [PN:transcriptional regulator (LysR family)] [GN:gltC] [FN:positive regulation of the glutamate synthase] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201to 2014980.] [SP:P20668] [LE:232835] [RE:233737] [DI:direct] >gp: [GI:e1185319:g2634240] [LN:BSUB0011] [AC:Z99114:AL009126] [PN:transcriptional regulator (LysR family)] [GN:gltC] [FN:positive regulation of the glutamate synthase] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [SP:P20668] [LE:13865] [RE:14767] [DI:direct] >gp: [GI:g457514] [LN:M28509] [AC:M28509] [GN:gltC] [FN:positive transcriptional regulator] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (gltC) gene, complete cds and glutamate synthase,large subunit (gltA) gene, partial cds. gene.] [LE:34] [RE:936] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_6832950_c1_218 2902 6674 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_956312_f2_139 2903 6675 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000998_984703_c2_281 2904 6676 1026 341 763 1.0e−75 Description sp: [LN:ABC_ECOLI] [AC:P30750:P77517] [GN:ABC] [OR:ESCHERICHIA COLI] [DE:ATP-BINDING PROTEIN ABC] [SP:P30750:P77517] [DB:swissprot] >pir: [LN:G64744] [AC:G64744:141113] [PN:probable ABC-type transport protein abc] [GN:abc] [CL:unassigned ATP-binding cassette proteins: ATP-binding cassette homology] [OR:Escherichia coli] [DB:pir2] >gp: [GI:g1552775] [LN:ECU70214] [AC:U70214] [PN:ATP-binding protein] [GN:abc] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli chromosome minutes 4–6.] [LE:52689] [RE:53720] [DI:complement] >gp: [GI:g1786398] [LN:AE000129] [AC:AE000129:U00096] [PN:ATP-binding component of a transporter] [GN:abc] [FN:transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 19 of 400 of the completegenome.] [NT:f343; 98 pct identical to fragment (231] [LE:1590] [RE:2621] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10191427_c1_745 2905 6677 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10320337_c3_1119 2906 6678 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10359688_f3_633 2907 6679 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10546925_c3_1155 2908 6680 978 325 1246 6.8e−127 Description sp: [LN:DNAA_STAAU] [AC:P49994] [GN:DNAA] [OR:STAPHYLOCOCCUS AUREUS] [DE:CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA] [SP:P49994] [DB:swissprot] >pir: [LN:JC5607] [AC:JC5607] [PN:replication initiation protein dnaA] [GN:dnaA] [CL:replication initiation protein dnaA] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:d1014451:g1694677] [LN:D89066] [AC:D89066] [PN:DnaA] [GN:dnaA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus DNA for DnaA, complete cds.] [LE:456] [RE:1817] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10556300_f2_428 2909 6681 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10556712_c3_1187 2910 6682 990 329 1667 1.7e−171 Description gp: [GI:g1408063] [LN:STAMECRA] [AC:L14017] [PN:methicillin-resistance protein] [GN:mecR] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) geneand unknown ORF, complete cds.] [NT:putative] [LE:125] [RE:1111] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10582782_f3_549 2911 6683 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10629385_f1_185 2912 6684 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10634800_c1_819 2913 6685 966 321 143 2.4e−07 Description pir: [LN:D69900] [AC:D69900] [PN:conserved hypothetical protein yobV] [GN:yobV] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:g2619048] [LN:AF027868] [AC:AF027868] [PN:transcription regulator] [GN:yobV] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosome region between terC and odhAB.] [NT:similar to Mycobacterium tuberculosis hypothetical] [LE:63061] [RE:64002] [DI:complement] >gp: [GI:e1185382:g2634303] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yobV] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] ]DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [NT:similar to hypothetical proteins] [LE:82152] [RE:83 093] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1071002_f3_616 2914 6686 411 136 71 0.026 Description gp: [G1:g142964] [LN:BACGERD] [AC:M27259] [OR:Bacillus subtilis] [SR:B.subtilis (strain 168) DNA, clone lambda-EMBL-3-2H] [DB:genpept-bct1] [DE:B.subtilis gerD gene, complete cds.] [NT:unknown ORF] [LE:<1] [RE:282] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10727217_f1_212 2915 6687 270 89 212 2.5e−17 Description pir: [LN:B69770] [AC:B69770] [PN:conserved hypothetical protein ydaS] [GN:ydaS] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1020027:g1881247] [LN:AB001488] [AC:AB001488] [GN:ydaS] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:25711] [RE:25968] [DI:complement] >gp: [GI:e1182403:g2632737] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydaS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [NT:similar to hypothetical proteins from B. subtilis] [LE:89455] [RE:89712] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10928_c2_1083 2916 6688 1242 413 240 8.2e−18 Description pir: [LN:T03492] [AC:T03492] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:pir2] [MP:1] >gp: [GI:g3128293] [LN:AF010496] [AC:AF010496] [PN: hypothetical protein] [OR:Rhodobacter capsulatus] [DB genpept-bct2] [DE:Rhodobacter capsulatus strain SB1003, partial genome.] [LE:54291] [RE:55613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_10928_f1_226 2917 6689 1017 338 175 1.3e−10 Description pir: [LN:T03492] [AC:T03492] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:pir2] [MP:1] >gp: [GI:g3128293] [LN:AF010496] [AC:AF010496] [PN:hypothetical protein] [OR:Rhodobacter capsulatus] [DB:genpept-bct2] [DE:Rhodobacter capsulatus strain SB1003, partial genome.] [LE:54291] [RE:55613] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_111500_c3_1239 2918 6690 546 181 101 1.9e−05 Description gp: [GI:g940735] [LN:LMIAP1270] [AC:X85869] [PN:invasive associated protein] [GN:iap] [OR:Listeria monocytogenes] [DB:genpept-bct1] [DE:L.monocytogenes type 1 partial iap gene (strain 12705/89) .] [NT:invades nonprofessional phagocytic cells] [LE:<1] [RE:>260] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_111592_c2_931 2919 6691 243 80 83 0.0083 Description gp: [GI:e1349691:g3880163] [LN:CET24A11] [AC:Z49072] [GN:T24A11.2] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid T24A11, complete sequence.] [LE:22751:23187:23506] [RE:23145:23464:23646] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_115627_f2_344 2920 6692 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1205000_f1_183 2921 6693 555 184 314 4.0e−28 Description pir: [LN:F69768] [AC:F69768] [PN:acetyltransferase homolog ydaF] [GN:ydaF] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1020012:g1881232] [LN:AB001488] [AC:AB001488] [GN:ydaF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:PROBABLE ACETYLTRANSFERASE.] [LE:6233] [RE:6784] [DI:direct] >gp: [GI:e1182387:g2632721] [LN:BSUB0003] [AC:Z99106:AL00912G] [GN:ydaF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 toG11850.] [NT:similar to acetyltransferase] [LE:69977] [RE:70528] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_12536337_f2_405 2922 6694 327 108 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_12588250_c1_671 2923 6695 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1259387_f2_250 2924 6696 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1261078_f1_223 2925 6697 579 192 471 9.1e−45 Description sp: [LN:XPT_BACSU] [AC:P42085] [GN:XPT] [OR:BACILLUS SUBTILIS] [EC:2.4.2.—] [DE:XANTHINE PHOSPHORIBOSYLTRANSFERASE,] [SP:P42085] [DB:swissprot] >pir: [LN:S51309] [AC:S51309:E69734] [PN:xanthine phosphoribosyltransferase xpt] [GN:xpt] [OR:Bacillus subtilis] [DB:pir2] >gp: p8 GI:g1256617] [LN:BACYACA] [AC:L77246] [PN:adenine phosphoribosyltransferase] [GN:xpt] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.2.7] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA andkdg loci.] [NT:27% identity with E.coli adenine] [LE:1426] [RE:2010] [DI:direct] >gp: [GI:e1183653:g2634626] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:xanthine phosphoribosyltransferase] [GN:xpt] [FN:purine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.4.2.7] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541to 2409220.] [SP:P42085] [LE:123142] [RE:123726] [DI:complement] >gp: [GI:g633169] [LN:BSXPTPBUX] [AC:X83878] [PN:xanthine phosphoribosyltransferase] [GN:xpt] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis xpt and pbuX genes.] [SP:P42085] [LE:357] [RE:941] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1301_f3_471 2926 6698 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_13089052_f1_2 2927 6699 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_134677_f2_417 2928 6700 1101 366 1373 2.4e−140 Description sp: [LN:YYAF_BACSU] [AC:P37518] [GN:YYAF] [OR:BACILLUS SUBTILIS] [DE:REGION] [SP:P37518] [DB:swissprot] >pir: [LN:S66016] [AC:S66016:E70084] [PN:probable GTP-binding protein yyaF] [GN:yyaF] [CL:yeast probable purine nucleotide-binding protein YBRO25c] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1005764:g467376] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:47839] [RE:48939] [DI:complement] >gp: [GI:e1184818:g2636639] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yyaF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281to 4214814.] [NT:similar to hypothetical proteins] [SP:P37518] [LE:199771] [RE:200871] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_13704191_c1_811 2929 6701 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_13750258_f1_41 2930 6702 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1379132_c1_806 2931 6703 564 187 589 2.9e−57 Description gp: [GI:d1045999:g5360823] [LN:D86934] [AC:D86934] [PN:IS150-like transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N028; putative] [LE:<20180] [RE:20578] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_13828575_f1_31 2932 6704 444 147 617 3.1e−60 Description sp: [LN:ARSC_STAAU] [AC:P30330] [GN:ARSC] [OR:STAPHYLOCOCCUS AUREUS] [DE:ARSENATE REDUCTASE (ARSENICAL PUMP MODIFIER)] [SP:P30330] [DB:swissprot] >pir:[LN:D41903] [AC:D41903] [PN:arsenate reductase,] [GN:arsC] [CL:protein-tyrosine-phosphatase, low molecular weight] [OR:Staphylococcus aureus] [EC:1.—.—.—] [DB:pir1] >gp:[GI:g150729] [LN:PI2ARSRBC] [AC:M86824] [PN:arsenate reductase] [GN:arsC] [FN:Reduction of arsenate to arsenite] [OR:Plasmid p1258] [SR:Plasmid p1258 DNA] [DB:genpept-bct1] [DE:Plasmid p1258 arsenic resistance operon (arsRBC) genes, completecds.] [LE:1894] [RE:2289] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1384628_f2_290 2933 6705 1278 425 251 4.3e−19 Description pir: [LN:H64514] [AC:H64514] [PN:hypothetical protein MJECL41] [OR:Methanococcus jannaschii] [DB:pir2] [MP:ECLREV53908-52610] >gp:[GI:g1522674] [LN:MII2CG] [AC:L77118] [PN:M. jannaschii predicted coding region MJECL41] [GN:MJECL41] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii large extra-chromosomal element, completesequence.] [NT:identified by GeneMark; putative] [LE:52610] [RE:53908] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_13864680_c2_1056 2934 6706 384 127 247 5.0e−21 Description sp: [LN:YQCJ_BACSU] [AC:P45949] [GN:YQCJ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 12.3 KD PROTEIN IN CWLA-CISA INTERGENIC REGION] [SP:P45949] [DB:swissprot] >pir: [LN:H69949] [AC:H69949] [PN:transcription regulator ArsR family homolog yqcJ] [GN:yqcJ] [CL:arsenical resistance operon repressor] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1013110:g1303775] [LN:BACJH642] [AC:D84432:D82370] [PN:YqcJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheAl) ) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:61977] [RE:62294] [DI:direct] >gp: [GI:d1007542:g1217882] [LN:BACSKIN] [AC:D32216] [PN:ORF3] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642 (trpC2 pheA1) ) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 48 kb region including a skin element which islocated between spoIVCB and spoIIIC.] [NT:similarity to arsenical resistance operon] [LE:43732] [RE:44049] [DI:direct] >gp: [GI:e1183810:g2635026] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yqcJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451to 2812870.] [NT:similar to transcriptional regulator (ArsR family)] [SP:P45949] [LE:57136] [RE:57453] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_13912551_c1_827 2935 6707 1695 564 156 6.7e−08 Description gp: [GI:g4530172] [LN:AF085222] [AC:AF085222] [PN:putative primase] [OR:Streptococcus thermophilus bacteriophage DT1] [DB:genpept-phg] [DE:Streptococcus thermophilus bacteriophage DT1, complete genome.] [NT:Orf3G] [LE:28549] [RE:30063] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14111687_f3_529 2936 6708 225 74 104 3.3e−05 Description sp: [LN:Y4IQ_RHISN] [AC:P55500] [GN:Y4IQ,Y4ND,Y4SD] [OR:RHIZOBIUM SP] [SR:NGR234,] [DE:PUTATIVE INSERTION SEQUENCE ATP-BINDING PROTEIN Y4IQ/Y4ND/Y4SD] [SP:P55500] [DB:swissprot] >gp: [GI:g2182455] [LN:AE000079] [AC:AE000079:U00090] [PN:Y4iQ]][GN:y4iQ] [OR:Rhizobium sp. NGR234] [DB:genpept-bct2] [DE:Rhizobium sp. NGR234 plasmid pNGR234a, section 16 of 46 of thecomplete plasmid sequence.] [NT:putative insertion sequence ATP-binding protein;] [LE:1883] [RE:2779] [DI:complement] >gp: [GI:g2182539] [LN:AE000086] [AC:AE000086:U00090] [PN:Y4nD] [GN:y4nD] [OR:Rhizobium sp. NGR234] [DB:genpept-bct2] [DE:Rhizobium sp. NGR234 plasmid pNGR234a, section 23 of 46 of thecomplete plasmid sequence.] [NT:putative insertion sequence ATP-binding protein;] [LE:8640] [RE:9536] [DI:complement] >gp: [GI:g2182618] [LN:AE000095] [AC:AE000095:U00090] [PN:Y4sD] [GN:y4sD] [OR:Rhizobium sp. NGR234] [DB:genpept-bct2] [DE:Rhizobium sp. NGR234 plasmid pNGR234a, section 32 of 46 of thecomplete plasmid sequence.] [NT:putative insertion sequence ATP-binding protein;] [LE:7675] [RE:8571] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14220027_f3_618 2937 6709 1143 380 190 3.0e−12 Description gp: [GI:d1025733:g2879913] [LN:D85752] [AC:D85752] [GN:bacG] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis plasmid:pPD1 DNA] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pPD1 bacA, bacB, bacC, bacD, bacE,bacF, bacG, bacH and bad genes, complete cds.] [LE:5832] [RE:7055] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14460882_c3_1296 2938 6710 342 114 484 3.8e−46 Description gp: [GI:g1022726] [LN:5HU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain = Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, completecds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14532058_c3_1228 2939 6711 273 90 452 9.4e−43 Description sp: [LN:TRA1_STAAU] [AC:P14506] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS257 IN TRANSPOSON TN4003] [SP:P14506] [DB:swissprot] >pir: [LN:504l62] [AC:S04162] [PN:transposase 1] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:g46748] [LN:SATN4003] [AC:X13290] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus multi-resistance plasmid pSK1 DNA containingtransposon Tn4003.] [NT:transposase (AA 1–224)] [SP:P14506] [LE:89] [RE:763] [DI:complement] >gp: [GI:g46753] [LN:SATN4003] [AC:X13290] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus multi-resistance plasmid pSK1 DNA containingtransposon Tn4003.] [NT:transposase (AA 1–224)] [SP:P14506] [LE:4017] [RE:4691] [DI:complement] >gp: [GI:g1762092] [LN:5EU40381] [AC:U40381] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK697 insertion sequenceIS257(697A) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp: [GI:g1762098] [LN:SEU40384] [AC:U40384] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK818 insertion sequenceIS257(818A) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp: [GI:g3676405] [LN:AF051916] [AC:AF051916] [PN:putative transposase TnpC] [GN:tnpC] [OR:Staphylococcus aureus] [DB genpept-bct2] [DE:Staphylococcus aureus plasmid pJE1 remnant of replication proteinRep (rep), trimethoprim resistance protein DfrA (dfrA), thymidylatesynthetase ThyE (thyE), and putative transposase Tnp (tnp) genes,complete cds; and unknown gene.] [LE:65] [RE:739] [DI:direct] >gp: [GI:g3676411] [LN:AF051916] [AC:AF051916] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pJE1 remnant of replication proteinRep (rep), trimethoprim resistance protein DfrA (dfrA), thymidylatesynthetase ThyE (thyE), and putative transposase Tnp (tnp) genes,complete cds; and unknown gene.] [LE:4409] [RE:5083] [DI:direct] >gp: [GI:g3676433] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpC] [GN:tnpC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41. complete sequence.] LE:22981] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14578382_f1_27 2940 6712 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14625031_f3_489 2941 6713 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14719827_c3_1275 2942 6714 330 109 85 0.0070 Description gp: [GI:g4049891] [LN:AF063866] [AC:AF063866] [PN:ORF MSV019 hypothetical protein] [GN:MSV019] [OR:Melanoplus sanguinipes entomopoxvirus] [DB:genpept-vr1] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:21761] [RE:23074] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14728382_f1_210 2943 6715 300 99 336 1.8e−30 Description sp: [LN:RSG_BACSU] [AC:P21468] [GN:RPSF] [OR:BACILLUS SUBTILIS] [DE:30S RIBOSOMAL PROTEIN SG (BS9)] [SP:P21468] [DB:swissprot] >pir: [LN:S66015] [AC:S66015:S11356:E69699] [PN:ribosomal protein S6 (BS9) rpsF:ribosomal protein BS9] [GN:rpsF] [CL:Escherichia coli ribosomal protein S6] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1005763:g467375] [LN:BAC180K] [AC:D26185] [PN:ribosomal protein 56] [GN:rpsF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:47441] [RE:47728] [DI:complement] >gp: [GI:e1184817:g2636638] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:ribosomal protein SG (BS9)] [GN:rpsF] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281to 4214814.] [SP:P21468] [LE:199373] [RE:199660] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_14881552_f1_187 2944 6716 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15033181_c3_1093 2945 6717 444 147 90 0.0071 Description gp: [GI:g4176374] [LN:AC004953] [AC:AC004953] [GN:WUGSC:H_DJ1059M17.2] [OR:Homo sapiens] [SR:INFORMATION] [DB:genpept-pri3] [DE:Homo sapiens PAC clone DJ1059M17 from 7q21–q31.1, completesequence.] [NT:myosin regulatory light chain 2; similar to S22715] [LE:67137:67324:69882] [RE:67235:67372:69960] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15052318_f2_391 2946 6718 1395 464 1606 4.9e−165 Description sp: [LN:THDF_BACSU] [AC:P25811] [GN:THDF] [OR:BACILLUS SUBTILIS] [DE:POSSIBLE THIOPHENE AND FURAN OXIDATION PROTEIN THDF] [SP:P25811] [DB:swissprot] >pir: [LN:JQ1215] [AC:140439:S66026:C69722:JQ1215:S18075] [PN:thiophen / furan oxidation protein thdF:50K protein homolog] [GN:thdF] [CL:thiophen / furan oxidation protein:translation elongation factor Tu homology] [OR:Bacillus subtilis] DB:pir2] >gp: [GI:d1005774:g467386] [LN:BAC180K] [AC:D26185] [PN:thiophen and furan oxidation] [GN:tdhF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:59506] [RE:60885] [DI:complement] >gp: [GI:g40025] [LN:BSORIGS] [AC:X62539] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B.subtilis genes rpmH, rnpA, 50kd, gidA and gidB.] [NT:homologous to E.coli 50K] [SP:P25811] [LE:2515] [RE:3894] [DI:direct] >gp: [GI:e1184828:g2636649] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:thdF] [FN:thiophen and furan oxidation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281to 4214814.] [SP:P25811] [LE:211438] [RE:212817] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15055313_c3_1183 2947 6719 444 147 753 1.2e−74 Description gp: [GI:d1046028:g5360852] [LN:D86934] [AC:D86934] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF CN038] [LE:45523] [RE:>45966] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15632952_c1_833 2948 6720 489 162 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_157500_c1_771 2949 6721 729 242 253 1.2e−21 Description sp: [LN:YD31_HELPY] [AC:O25889] [GN:HP1331] [OR:HELICOBACTER PYLORI] [SR:,CANPYLOBACTER PYLORI] [DE:HYPOTHETICAL PROTEIN HP1331] [SP:025889] [DB:swissprot] >pir: [LN:C64686] [AC:C64686] [PN:conserved hypothetical integral membrane protein HP1331] [CL:hypothetical protein b2682] [OR:Helicobacter pylori] [DB:pir2] >gp: [GI:g2314496] [LN:AE000634] [AC:AE000634:AE000511] [PN:conserved hypothetical integral membrane] [GN:HP1331] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 112 of 134 of the completegenome.] [NT:similar to GB:L42023 SP:P44302 PID:1008819] [LE:10600] [RE:11286] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15752213_f1_167 2950 6722 270 89 74 0.034 Description gp: [GI:g2645365] [LN:SHU83823] [AC:U83823] [PN:NADH dehydrogenase subunit 4] [GN:ND4] [OR:Mitochondrion Sigmodon hispidus] [SR:Sigmodon hispidus] [DB:genpept-rod] [DE:Sigmodon hispidus NADH dehydrogenase subunit 3 (ND3) and NADHdehydrogenase subunit 4L (ND4L) genes, complete cds, NADHdehydrogenase subunit 4 (ND4) gene, partial cds, and tRNA-Arg gene,complete sequence, mitochondrial genes encoding mitochondrialproducts.] [LE:709] [RE:>1332] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15788276_f3_494 2951 6723 198 65 56 0.028 Description gp: [GI:g452394] [LN:BMFLC3] [AC:Z26886] [PN:Nd-sD mutant fibroin light chain] [OR:Bombyx mori] [SR:domestic silkworm] [DB:genpept-inv1] [DE:B.mori gene for Nd-sD mutant fibroin light chain.] [LE:<1:1275:1732] [RE:125:1447:2074] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_15893843_f2_246 2952 6724 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_161661_f3_507 2953 6725 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16222092_f1_44 2954 6726 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_162812_c2_1058 2955 6727 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16432963_c1_709 2956 6728 1116 371 972 7.4e−98 Description pir: [LN:A69847] [AC:A69847] [PN:cystathionine gamma-synthase homolog yjcI] [GN:yjcI] [CL:O-succinylhomoserine (thiol)-lyase] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1l83207:g2633541] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjcI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391to 1411140.] [NT:similar to cystathionine gamma-synthase] [LE:63573] [RE:64694] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16601512_c1_834 2957 6729 510 169 98 0.0027 Description gp: [GI:e1346924:g3877219] [LN:CEF4GF3] [AC:Z81085] [GN:F46F3.3] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid F46F3, complete sequence.] [LE:12629:13473:14592:14734] [RE:12740:13771:14687:14877] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16688_c2_1062 2958 6730 216 71 95 6.4e−05 Description gp: [GI:g5230679] [LN:AF036485] [AC:AF036485:AF036486:AF036487:U93364] [PN:hypothetical protein] [OR:Plasmid pNZ4000] [DB:genpept] [DE:Plasmid pNZ4000, complete sequence.] [NT:Orf-100] [LE:42675:1] [RE:42810:167] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16695311_f2_259 2959 6731 693 230 1184 2.5e−120 Description sp: [LN:TRA2_STAAU] [AC:P19380] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE-LIKE ELEMENT IS431MEC] [SP:P19380] [DB:swissprot] >pir: [LN:512093] [AC:S12093:JU0116] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:g46602] [LN:SAIS431M] [AC:X53818:M18438] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus IS431mec gene associated with methicillin resistance.] [NT:putative transposase (AA 1–224)] [SP:P19380] [LE:272] [RE:946] [DI:direct] >gp: [GI:e1237900:g2791991] [LN:SANECAR1I] [AC:Y14051] [PN:putative transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus mecA, mecR1, med genes and ORF168, ORF142,ORF44, ORF145 and ORF224.] [NT:ORF224] [LE:8096] [RE:8770] [DI:direct] >gp: [GI:d1046034:g5360858] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N062] [LE:48054] [RE:48728] [DI:direct] >gp: [GI:dl046044:g5360868] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N070] [LE:53400] [RE:54074] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16695311_f2_282 2960 6732 693 230 1191 4.6e−121 Description sp: [LN:TRA2_STAAU] [AC:P19380] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE-LIKE ELEMENT IS431MEC] [SP:P19380] [DB:swissprot] >pir: [LN:512093] [AC:S12093:JU0116] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:g46602] [LN:SAIS431M] [AC:X53818:M18438] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus IS431mec gene associated with methicillin resistance.] [NT:putative transposase (AA 1–224)] [SP:P19380] [LE:272] [RE:946] [DI:direct] >gp: [GI:e1237900:g2791991] [LN:SANECAR1I] [AC:Y14051] [PN:putative transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus mecA, mecR1, mecI genes and ORF168, ORF142,ORF44, ORF145 and ORF224.] [NT:ORF224] [LE:8096] [RE:8770] [DI:direct] >gp: [GI:d1046034:g5360858] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N062] [LE:48054] [RE:48728] [DI:direct] >gp: [GI:d1046044:g5360868] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N070] [LE:53400] [RE:54074] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_16975082_c1_860 2961 6733 306 101 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_17004551_f1_11 2962 6734 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_193812_c1_810 2963 6735 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19531308_c1_778 2964 6736 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19548192_c3_1120 2965 6737 765 254 68 0.00074 Description pir: [LN:S44477] [AC:S44477:558747] [PN:NADH dehydrogenase (ubiquinone), chain 4L] [GN:ND4L] [CL:NADH dehydrogenase (ubiquinone) chain 4L] [OR:mitochondrion Hansenula wingei] [EC:1.6.5.3] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_1960300_f1_181 2966 6738 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19613436_f2_338 2967 6739 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19647213_c3_1213 2968 6740 342 113 157 1.7e−11 Description pir: [LN:C69774] [AC:C69774] [PN:transcription regulator phage-related homolog ydcN] [GN:ydcN] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:d1020073:g1881293] [LN:AB001488] [AC:AB001488] [GN:ydcN] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the regionbetween 35 and 47 degree.] [NT:PROBABLE REPRESSOR PROTEIN.] [LE:64366] [RE:64749] [DI:complement] >gp: [GI:e1182448:g2632782] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydcN] [FN:unknown][[OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to611850.] [NT:similar to transcriptional regulator] [LE:128111] [RE:128494] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19719812_c1_877 2969 6741 474 157 803 6.0e−80 Description sp: [LN:TRA1_STAAU] [AC:P14506] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS257 IN TRANSPOSON TN4003] [SP:P14506] [DB:swissprot] >pir: [LN:S04162] [AC:504162] [PN:transposase 1] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:g46748] [LN:SATN4003] [AC:X13290] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus multi-resistance plasmid pSK1 DNA containingtransposon Tn4003.] [NT:transposase (AA 1–224)] [SP:P14506] [LE:89] [RE:763] [DI:complement] >gp: [GI:g46753] [LN:SATN4003] [AC:X13290] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus multi-resistance plasmid pSK1 DNA containingtransposon Tn4003.] [NT:transposase (AA 1–224)] [SP:P14506] [LE:4017] [RE:4691] [DI:complement] >gp: [GI:g1762092] [LN:SEU40381] [AC:U40381] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK697 insertion sequenceIS257(697A) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp: [GI:g1762098] [LN:SEU40384] [AC:U40384] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK818 insertion sequenceIS257(818A) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp:[GI:g3676405] [LN:AF051916] [AC:AF051916] [PN:putative transposase TnpC] [GN:tnpC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pJE1 remnant of replication proteinRep (rep), trimethoprim resistance protein DfrA (dfrA), thymidylatesynthetase ThyE (thyE), and putative transposase Tnp (tnp) genes,complete cds; and unknown gene.] [LE:65] [RE:739] [DI:direct] >gp: [GI:g3676411] [LN:AF051916] [AC:AF051916] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pJE1 remnant of replication proteinRep (rep), trimethoprim resistance protein DfrA (dfrA), thymidylatesynthetase ThyE (thyE), and putative transposase Tnp (tnp) genes,complete cds; and unknown gene.] [LE:4409] [RE:5083] [DI:direct] >gp: [GI:g3676433] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpC] [GN:tnpC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:22981] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19720462_f2_314 2970 6742 1203 400 370 4.6e−34 Description sp: [LN:YJIJ_ECOLI] [AC:P39381] [GN:YJIJ] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 41.4 KD PROTEIN IN IADA-MCRD INTERGENIC REGION (F392)] [SP:P39381] [DB:swissprot] >pir: [LN:S56557] [AC:556557:F65247] [PN:hypothetical 41.4K protein (iadA-mcrD intergenic region):hypothetical protein f392] [GN:yjiJ] [OR:Escherichia coli] [DB:pir2] >gp: [GI:g537173] [LN:ECOUW93] [AC:U14003] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [NT:ORF_f392] [LE:252329] [RE:253507] [DI:complement] >gp: [GI:g1790788] [LN:AE000503] [AC:AE000503:U00096] [PN:putative transport protein] [GN:yjiJ] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 393 of 400 of the completegenome.] [NT:f392; 100 pct identical amino acid sequence and] [LE:10037] [RE:11215] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19767150_c3_1177 2971 6743 567 188 746 6.6e−74 Description gp: [GI:d1046049:g5360873] [LN:D86934] [AC:D86934] [PN:orfX] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF CN051] [LE:56338] [RE:>56817] [DI:complement] >gp: [GI:d1046058:g5391439] [LN:AB014440] [AC:AB014440] [PN:orfX] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:NCTC8325) DNA] [DB:genpept] [DE:Staphylococcus aureus genes for orf1, orfX, orf2, orf3, partial andcomplete cds.] [NT:integration site of mecDNA was predicted to locate] [LE:1396] [RE:1875] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_19803150_f2_421 2972 6744 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20194532_c1_732 2973 6745 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20329376_f1_94 2974 6746 174 57 57 0.013 Description pir: [LN:D70158] [AC:D70158] [PN:lipoprotein signal peptidase,] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [EC:3.4.23.36] [DB:pir2] >gp: [GI:g2688373] [LN:AE001151] [AC:AE001151:AE000783] [PN:signal peptidase II (1sp)] [GN:BB0469] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 37 of 70) of the complete genome.] [NT:similar to GB:X78084 PID:459545 SP:Q59835 percent] [LE:10907] [RE:11419] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20359682_f1_169 2975 6747 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20517318_f1_193 2976 6748 1200 399 1171 6.1e−119 Description gp: [GI:e281310:g1667356] [LN:CTZ82038] [AC:Z82038] [PN:acetyl coenzyme A acetyltransferase (thiolase)] [GN:thlA] [OR:Thermoanaerobacterium thermosaccharolyticum] [DB:genpept-bct1] [EC:2.3.1.9] [DE:C.thermosaccharolyticum etfB, etfA, hbd, thlA and actA genes.] [LE:2642] [RE:3820] [DI:direct] >gp: [GI:e308220:g1903332] [LN:TTBCSOPRN] [AC:Z92974] [PN:acetyl coenzyme A acetyltransferase (thiolase)] [GN:thl] [OR:Thermoanaerobacterium thermosaccharolyticum] [DB genpept-bct1] [EC:2.3.1.9] [DE:T.thermosaccharolyticum BCS operon DNA.] [LE:4835] [RE:6013] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20523253_c3_1227 2977 6749 252 83 447 3.2e−42 Description sp: [LN:TRA1_STAAU] [AC:P14506] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS257 IN TRANSPOSON TN4003] [SP:P14506] [DB:swissprot] >pir: [LN:S04162] [AC:504162] [PN:transposase 1] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:g46748] [LN:SATN4003] [AC:X13290] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus multi-resistance plasmid pSK1 DNA containingtransposon Tn4003.] [NT:transposase (AA 1–224)] [SP:P14506] [LE:89] [RE:763] [DI:complement] >gp: [GI:g46753] [LN:SATN4003] [AC:X13290] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus multi-resistance plasmid pSK1 DNA containingtransposon Tn4003.] [NT:transposase (AA 1–224)] [SP:P14506] [LE:4017] [RE:4691] [DI:complement] >gp: [GI:g1762092] [LN:SEU40381] [AC:U40381] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK697 insertion sequenceIS257(697A) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp: [GI:g1762098] [LN:5EU40384] [AC:U40384] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK818 insertion sequenceIS257(818A) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp: [GI:g3676405] [LN:AF051916] [AC:AF051916] [PN:putative transposase TnpC] [GN:tnpC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pJE1 remnant of replication proteinRep (rep), trimethoprim resistance protein DfrA (dfrA), thymidylatesynthetase ThyE (thyE), and putative transposase Tnp (tnp) genes,complete cds; and unknown gene.] [LE:65] [RE:739] [DI:direct] >gp: [GI:g3676411] [LN:AF051916] [AC:AF051916] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pJE1 remnant of replication proteinRep (rep), trimethoprim resistance protein DfrA (dfrA), thymidylatesynthetase ThyE (thyE), and putative transposase Tnp (tnp) genes,complete cds; and unknown gene.] [LE:4409] [RE:5083] [DI:direct] >gp: [GI:g3676433] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpC] [GN:tnpC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:22981] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20585963_c3_1206 2978 6750 348 115 478 1.7e−45 Description gp: [GI:d1045998:g5360822] [LN:D86934] [AC:D86934] [PN:IS150-like transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N311 [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N027; putative] [LE:19826] [RE:20179] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20585963_c3_1283 2979 6751 906 301 647 2.0e−63 Description gp: [GI:g929972] [LN:BAU30714] [AC:U30714] [OR:Bacillus anthracis] [SR:plasmid pXO1] [DB:genpept-bct1] [DE:Bacillus anthracis Weybridge A toxin plasmid pXO1 right invertedrepeat element (WeyAR) bordering the toxin-encoding region, ORFAand ORFB genes, complete cds.] [NT:ORFB; similar to B. anthracis SterneL element ORFB;] [LE:512] [RE:1336] [DI:direct] >gp: [GI:g929975] [LN:BAU30715] [AC:U30715] [OR:Bacillus anthracis] [SR:plasmid pXO1] [DB:genpept-bct1] [DE:Bacillus anthracis Sterne toxin plasmid pXO1 left inverted repeatelement (SterneL) bordering the toxin-encoding region, ORFB andtruncated ORFA genes, complete cds.] [NT:ORFB; similar to B. anthracis WeyAR element ORFB;] [LE:458] [RE:1282] [DI:direct] >gp: [GI:g4894312] [LN:AF065404] [AC:AF065404] [PN:pXO1–96] [OR:Bacillus anthracis] [DB:genpept-bct2] [DE:Bacillus anthracis virulence plasmid PXO1, complete sequence.] [LE:116307] [RE:117131] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_20964212_c3_1232 2980 6752 1692 563 652 6.0e−64 Description gp: [GI:d1046002:g5360826] [LN:D86934] [AC:D86934] [PN:site-specific recombinase] [GN:ccrB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N037; cassette chromosome recombinase B] [LE:25508] [RE:27136] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2116643_f3_472 2981 6753 189 62 47 0.0062 Description sp: [LN:TYB4_MOUSE] [AC:P20065] [GN:TMSB4:PTMB4] [OR:MUS MUSCULUS] [SR:,MOUSE] [DE:THYMOSIN BETA-4] [SP:P20065] [DB:swissprot] >pir: [LN:A37217] [AC:A37217:508074:512884] [PN:thymosin beta-4] [CL:thymosin beta] [OR:Mus musculus] [SR:, house mouse] [DB:pir2] >gpKGI:g54794] [LN:MMTHYB4] [AC:X16053:M38039:M54991] [OR:Mus musculus] [SR:house mouse] [DB:genpept-rod] [DE:Mouse mRNA for thymosin beta-4.] [NT:thymosin beta-4a (AA 1–50)] [SP:P20065] [LE:140] [RE:292] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2120265_c3_1214 2982 6754 870 289 151 6.1e−08 Description pir: [LN:S76167] [AC:S76167] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp: [GI:d1019159:g1653513] [LN:D90914] [AC:D90914:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 16/27, 1991550–2137258.] [NT:ORF_ID:slr0959] [LE:37283] [RE:38872] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2128400_f1_188 2983 6755 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2148468_f2_400 2984 6756 2073 690 1718 6.6e−177 Description gp: [GI:g3789932] [LN:AF090142] [AC:AF090142] [PN:lipase precursor] [GN:gehD] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [EC:3.1.1.3] [DE:Staphylococcus epidermidis lipase precursor (gehD) gene, completecds.] [NT:GehD] [LE:293] [RE:2224] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_21506575_c1_702 2985 6757 897 298 331 6.2e−30 Description pir: [LN:JC5911] [AC:JC5911] [PN:lysin] [GN:lys] [OR:Lactobacillus phage phi-gle] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_21521878_c1_795 2986 6758 354 117 181 1.2e−12 Description pir: [LN:F64114] [AC:F64114] [PN:type I site-specific deoxyribonuclease, chain hsdR] [GN:hsdR] [CL:DEAD/H box helicase homology] [OR:Haemophilus influenzae] [EC:3.1.21.3] [DB:pir2] >gp: [GI:g1574743] [LN:U32808] [AC:U32808:L42023] [PN:type I restriction enzyme (hsdR)] [GN:H11285] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 123 of 163 of the completegenome.] [NT:similar to PID:1685100 percent identity: 59.01;] [LE:5702] [RE:8869] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_21532937_f2_349 2987 6759 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_21644175_c3_1179 2988 6760 273 90 439 2.2e−41 Description gp: [GI:d1046045:g5360869] [LN:D86934] [AC:D86934] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF CN049] [LE:54106] [RE:>54378] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_21660805_f1_145 2989 6761 1017 338 867 9.9e−87 Description gp: [GI:g3044072] [LN:AF055713] [AC:AF055713] [PN:beta-hemolysin] [GN:hlb] [OR:Staphylococcus schleiferi] [DB:genpept-bct2] [DE:Staphylococcus schleiferi beta-hemolysin (hib) gene, partial cds.] [LE:1] [RE:>987] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_21736277_f2_365 2990 6762 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22078331_f2_355 2991 6763 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2209675_f1_61 2992 6764 1470 489 465 3.9e−44 Description sp: [LN:TYD2_PETCR] [AC:Q06086] [GN:TYRDC-2] [OR:PETROSELINtJM CRISPUM] [SR:,PARSLEY:PETROSELINUM HORTENSE] [EC:4.1.1.25] [DE:TYROSINE DECARBOXYLASE 2,] [SP:Q06086] [DB:swissprot] >pir: [LN:A44405] [AC:A44405] [PN:tyrosine decarboxylase,] [GN:tyrCD] [CL:aromatic-L-amino-acid decarboxylase:animal histidine decarboxylase homology] [OR:Petroselinum crispum] [SR:, parsley] [EC:4.1.1.25] [DB:pir2] >gp: [GI:g169671] [LN:PUMTRYDC2X] [AC:M96070] [PN:tyrosine decarboxylase] [GN:TryDC-2] [OR:Petroselinum crispum] [SR:Petroselinum crispum (library: lambda gt11) cDNA to mRNA] [DB:genpept-pln1] [EC:4.1.1.25] [DE:Parsley tyrosine decarboxylase (TryDC-2) mRNA, complete cds.] [LE:4] [RE:1548] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2214217_c2_984 2993 6765 1845 614 2888 6.9e−301 Description gp: [GI:g5114231] [LN:AF136709] [AC:AF136709] [PN:histidine kinase YycG] [GN:yycG] [OR:Staphylococcus aureus] [DB:genpept] [DE:Staphylococcus aureus response regulator YycF (yycF) and histidinekinase YycG (yycG) genes, complete cds.] [LE:1363] [RE:3189] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22275082_f2_264 2994 6766 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22291327_c2_908 2995 6767 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22383437_f2_293 2996 6768 321 106 80 0.0091 Description pir: [LN:529577] [AC:151043:529577] [PN:Ig light chain] [GN:IgL] [OR:Oncorhynchus mykiss] [SR:, rainbow trout] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22475037_c3_1209 2997 6769 126 41 114 2.3e−06 Description gp: [GI:g2605928] [LN:AF029727] [AC:AF029727] [OR:Enterococcus faecium] [DB:genpept-bct2] [DE:Enterococcus faecium insertion sequence IS1485, complete sequence.] [NT:putative; orfB] [LE:402] [RE:1238] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22537563_c1_840 2998 6770 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22679825_f1_84 2999 6771 168 55 111 7.6e−06 Description pir: [LN:B69978] [AC:B69978] [PN:2-nitropropane dioxygenase homolog yrpB] [GN:yrpB] [OR:Bacillus subtilis] [DB:pir2] >gp:g1934639] [LN:BSU93875] [AC:U93875] [PN:2-nitropropane dioxygenase] [GN:yrpB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis alcohol dehydrogenase (adhB) gene, partial cds,hypothetical spore coat protein (yraF), hypothetical spore coatprotein (yraG), YraH (yraH), YraI (yraI), YraJ (yraJ), YraK (yraK) ,YraL (yraL), chitosanase precursor (csn), YraM (yraM), LysR-familytranscription regulator (yraN), YraO (yraO), YrpG (yrpG), RNApolymerase sigma factor SigZ (sigZ), YrpE (yrpE), YrpD (yrpD), YrpC(yrpC) and 2-nitropropane dioxygenase (yrpB) genes, complete cds,and aminoglycoside 6-adenylyltransferase (aadK) gene, partial cds.] [NT:similar to 2-nitropropane dioxigenase of Williopsis] [LE:16473] [RE:17516] [DI:complement] >gp: [GI:e1183909:g2635125] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrpB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451to 2812870.] [NT:similar to 2-nitropropane dioxygenase] [LE:136734] [RE:137777] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22900337_c2_906 3000 6772 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_22902302_c1_767 3001 6773 1407 468 2010 7.5e−208 Description sp: [LN:SYS_STAAU] [AC:P95689] [GN:SERS] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.1.1.11] [DE:SERYL-TRNA SYNTHETASE, (SERINE--TRNA LIGASE) (SERRS)] [SP:P95689] [DB:swissprot] >gp: [GI:e291101:g1835218] [LN:SASERS] [AC:Y09924] [PN:seryl-trna synthetase] [GN:serS] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:6.1.1.11] [DE:S.aureus serS gene.] [SP:P95689] [LE:1] [RE:1287] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23437803_f3_452 3002 6774 714 237 129 7.7e−07 Description gp: [GI:g4981720] [LN:AE001774] [AC:AE001774:AE000512] [PN:transcriptional regulator, crp family] [GN:TM1171] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 86 of 136 of the complete genome.] [NT:similar to GB:Z26044 SP:P47200 PID:398391 percent] [LE:5164] [RE:5769] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23438301_f1_87 3003 6775 255 84 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23438876_f3_528 3004 6776 258 85 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23439193_c3_1263 3005 6777 495 164 453 7.4e−43 Description pir: [LN:G69784] [AC:G69784] [PN:hypothetical protein ydhK] [GN:ydhK] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1182558:g2632892] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:ydhK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to813890.] [LE:23509] [RE:24126] [DI:direct] >gp: [GI:d1020482:g1945095] [LN:D88802] [AC:D88802] [GN:ydhK] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub species:Marburg, strain:168, isolate:JH642] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for phoB-rrnE-groESL region, complete cds.] [NT:membrane protein] [LE:10511] [RE:11128] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2345025_c2_913 3006 6778 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23462762_c3_1097 3007 6779 1527 508 2298 2.3e−238 Description sp: [LN:AHPF_STAAU] [AC:O05204] [GN:AHPF] [OR:STAPHYLOCOCCUS AUREUS] [EC:1.6.4.—] [DE:ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F,] [SP:O05204] [DB:swissprot] >gp: [GI:g1916317] [LN:SAU92441] [AC:U92441:X85029] [PN:alkyl hydroperoxide reductase subunit F] [GN:ahpF] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus alkyl hydroperoxide reductase subunit C(aphC) and subunit F (aphF) genes, complete cds.] [NT:AhpF] [LE:1376] [RE:2899] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23468762_f3_521 3008 6780 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23507_c1_765 3009 6781 2709 902 3998 0.0 Description gp: [GI:d1001842:g540542] [LN:STAGYRABA] [AC:D10489] [PN:DNA gyrase A] [GN:gyrA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:ATCC12600) DNA]. [DB:genpept-bct1] [EC:5.99.1.3] [DE:Staphylococcus aureus genes for DNA gyrase A and B, complete cds.] [LE:2152] [RE:4815] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23537785_f2_233 3010 6782 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23538427_c2_887 3011 6783 309 102 132 8.3e−09 Description pir: [N:F71456] [AC:F71456] [PN:hypothetical protein PH0308] [GN:PH0308] [OR:Pyrococcus horikoshii] [DB:pir2] >gp: [GI:d1030324:g3256698] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:215aa long hypothetical protein] [GN:PH0308] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1–287000 nt. position (1/7).] [NT:motif = prokaryotic membrane lipoprotein lipid] [LE:271764] [RE:272411] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23556577_f1_99 3012 6784 324 107 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23563500_c1_706 3013 6785 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_235678_f2_239 3014 6786 216 71 203 2.3e−16 Description pir: [LN:F69903] [AC:F69903] [PN:D-alanyl-D-alanine carboxypeptidase homolog yodJ] [GN:yodJ] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:g2415396] [LN:AF015775] [AC:AF015775] [PN:carboxypeptidase] [GN:yodJ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis YodA (yodA), YodB (yodB), YodC (yodC), YodD(yodD), ABC-transporter (yodE), permease (yodF), proteinase (ctpA) ,YodH (yodH), YodI (yodI), carboxypeptidase (yodJ), purinenucleoside phosphorylase (deoD), YodL (yodL), YodM (yodM), YodN(yodN), YodO (yodO), YodP (yodP), acetylornitine deacetylase(argE), butirate-acetoacetate CoA transferase (yodR), butyrateacetoacetate-CoA transferase (yodS), YodT (yodT), CgeE (cgeE), CgeD(cgeD), CgeC (cgeC), CgeA (cgeA), CgeB (cgeB), YzxA (yzxA),UDP-glucose epimerase (yodU), YodV (yodV), and YodW (yodW) genes,complete cds; and YodZ (yodZ) gene, partial cds.] [NT:similar to Enterococcus faecium D-alanil-D-alanine] [LE:8510] [RE:9331] [DI:complement] >gp: [GI:e1185433:g2634354] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yodJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171to 2207900.] [NT:similar to D-alanyl-D-alanine carboxypeptidase] [LE:133640] [RE:134461] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23610885_c1_820 3015 6787 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23610952_c2_1082 3016 6788 855 284 305 3.6e−27 Description pir: [LN:H69468] [AC:H69468] [PN:lysophospholipase homolog] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp: [GI:g2648798] [LN:AE000982] [AC:AE000982:AE000782] [PN:lysophospholipase] [GN:AF1753] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 125 of 172 of the complete genome.] [NT:similar to GP:1763011 percent identity: 33.46;] [LE:10776] [RE:11576] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23612907_c1_696 3017 6789 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23631512_c3_1178 3018 6790 1323 440 2289 2.0e−237 Description gp: [GI:d1046046:g5360870] [LN:D86934] [AC:D86934] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF CN050] [LE:54760] [RE:>56082] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23632883_c1_844 3019 6791 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23634682_c2_1013 3020 6792 375 124 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23634786_f3_619 3021 6793 1200 399 692 3.5e−68 Description gp: [GI:d1025735:g2879915] [LN:D85752] [AC:D85752] [GN:bacI] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis plasmid:pPD1 DNA] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pPD1 bacA, bacB, bacC, bacD, bacE,bacF, bacG, bacH and bad genes, complete cds.] [LE:7732] [RE:8931] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23635302_c1_867 3022 6794 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23635931_c1_854 3023 6795 375 124 637 2.3e−62 Description sp: [LN:MERT_STAAU] [AC:P08656] [GN:MERT] [OR:STAPHYLOCOCCUS AUREUS] [DE:MERCURIC TRANSPORT PROTEIN (MERCURY ION TRANSPORT PROTEIN)] [SP:P08656] [DB:swissprot] >pir: [LN:D29504] [AC:D29504] [PN:hypothetical 14K protein (mer operon)] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:g459906] [LN:L29436] [AC:L29436:M15048:N00048] [GN:mert] [OR:Plasmid p1258] [SR:Plasmid p1258 DNA] [DB:genpept-bct1] [DE:Plasmid p1258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transportprotein (merT), complete cds.] [LE:2704] [RE:3090] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23679765_f3_449 3024 6796 1269 422 1274 7.4e−130 Description gp: [GI:e1299582:g3687416] [LN:BLY17554] [AC:Y17554] [PN:arginine deiminase] [GN:arcA] [OR:Bacillus licheniformis] [DB:genpept-bct1] [EC:3.5.3.G] [DE:Bacillus licheniformis arcA, arcB, arcC and arcD genes.] [LE:248] [RE:1489] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23703175_c3_1103 3025 6797 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23704502_f1_158 3026 6798 267 88 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23834461_f3_588 3027 6799 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23860812_f2_403 3028 6800 603 200 540 4.5e−52 Description gp: [GI:g4l85302] [LN:AF089862] [AC:AF089862] [PN:type-I signal peptidase SipB] [GN:sipB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus type-I signal peptidase SipA (sipA) andtype-I signal peptidase SipB (sipB) genes, complete cds; andunknown gene.] [NT:leader peptidase] [LE:1502] [RE:2071] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23866566_c2_1067 3029 6801 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23959802_c1_787 3030 6802 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23959802_c3_1250 3031 6803 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23959802_c3_1261 3032 6804 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23959802_f2_313 3033 6805 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_23959802_f3_447 3034 6806 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24016062_f1_168 3035 6807 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24023300_c2_964 3036 6808 516 171 760 2.2e−75 Description sp: [LN:DNAA_STAAU] [AC:P49994] [GN:DNAA] [OR:STAPHYLOCOCCUS AUREUS] [DE:CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA] [SP:P49994] [DB:swissprot] >pir: [LN:JC5607] [AC:JC5607] [PN:replication initiation protein dnaA] [GN:dnaA] [CL:replication initiation protein dnaA] [OR:Staphylococcus aureus] [DB:pir2] >gp: [GI:d1014451:g1694677] [LN:D89066] [AC:D89066] [PN:DnaA] [GN:dnaA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus DNA] [DB genpept-bct1] [DE:Staphylococcus aureus DNA for DnaA, complete cds.] [LE:456] [RE:1817] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24101587_f3_455 3037 6809 339 112 79 0.0098 Description pir: [LN:542040] [AC:542040] [PN:hypothetical protein 3] [OR:Leuconostoc oenos] [DB:pir2] >gp: [GI:g515739] [LN:LEUORF15X] [AC:L28806] [FN:unknown] [OR:Oenococcus oeni] [DB:genpept-bct1] [DE:Leuconostoc oenos complete ORF1–ORF5.] [NT:ORF3; putative] [LE:2571] [RE:2975] [DI:direct] >gp: [GI:g454968] [LN:LOPLORFG] [AC:Z29976] [OR:Oenococcus oeni] [DB:genpept-bct1] [DE:L.oenos plasmid p4028 ORF1, ORF2, ORF3, ORF4, ORF5 genes.] [NT:ORF3] [LE:2571] [RE:2975] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24110635_c3_1231 3038 6810 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24220062_c3_1104 3039 6811 285 94 68 0.045 Description gp: [GI:g4731269] [LN:AF110706] [AC:AF110706] [PN:cytochrome oxidase I] [OR:Mitochoridrion Bemisia tabaci] [SR:sweet potato whitefly] [DB:genpept-inv2] [DE:Bemisia tabaci cytochrome oxidase I gene, partial cds;mitochondrial gene for mitochondrial product.] [NT:premature stop codon.] [LE:<1] [RE:330] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24234562_c2_890 3040 6812 222 73 64 0.026 Description gp: [GI:g4808591] [LN:AF093829] [AC:AF093829] [PN:alpha-1,2-fucosyltransferase long form] [OR:Helicobacter pylori] [DB:genpept-bct2] [DE:Helicobacter pylori strain UA1182 alpha-1,2-fucosyltransferasegene, alternative products, complete cds.] [NT:ribosomal slippage] [LE:141:573] [RE:573:1042] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24250010_c3_1271 3041 6813 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24255312_f1_128 3042 6814 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24256437_c1_717 3043 6815 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24273442_f1_22 3044 6816 384 127 144 4.1e−10 Description pir: [LN:C70043] [AC:C70043] [PN:hypothetical protein yvlA] [GN:yvlA] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1186201:g2636026] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvlA] [FN:unknown] OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551to 3609060.] [LE:207957] [RE:208283] [DI:complement] >gp: [GI:e1184419:g2636039] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:10417] [RE:10743] [DI:complement] >gp: [GI:g2618844] [LN:AF017113] [AC:AF017113] [PN:YvlA] [GN:yvlA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:19550] [RE:19876] [DI:direct] >gp: [GI:e1184419:g2636039] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:10417] [RE:10743] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24273442_f1_85 3045 6817 384 127 142 6.7e−10 Description pir: [LN:C70043] [AC:C70043] [PN:hypothetical protein yvlA] [GN:yvlA] [OR:Bacillus subtilis] [DB:pir2] >gp: [GI:e1186201:g2636026] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551to 3609060.] [LE:207957] [RE:208283] [DI:complement] >gp: [GI:e1184419:g2636039] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:10417] [RE:10743] [DI:complement] >gp: [GI:g2618844] [LN:AF017113] [AC:AF017113] [PN:YvlA] [GN:yvlA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:19550] [RE:19876] [DI:direct] >gp: [GI:e1184419:g2636039] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvlA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091to 3809700.] [LE:10417] [RE:10743] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24297050_c2_904 3046 6818 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24299037_c3_1238 3047 6819 255 84 68 0.045 Description gp: [GI:g4049677] [LN:AF063866] [AC:AF063866] [PN:ORF MSV084 hypothetical protein] [GN:MSVO84] [OR:Melanoplus sanguinipes entomopoxvirus] [DB:genpept-vrl] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:80206] [RE:80577] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24329192_c2_986 3048 6820 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24332641_c1_768 3049 6821 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24401712_c1_826 3050 6822 1125 374 117 0.0014 Description pir: [LN:C70168] [AC:C70168] [PN:DNA polymerase I (polA) homolog] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp: [GI:g2688462] [LN:AE001156] [AC:AE00115G:AE000783] [PN:DNA polymerase I (polA)] [GN:BB0548] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 42 of 70) of the complete genome.] [NT:similar to GB:L42023 SP:P43741 PID:1005915] [LE:6171] [RE:8897] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24406311_c3_1111 3051 6823 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24406338_c3_1122 3052 6824 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24407313_c2_880 3053 6825 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24407812_c3_1182 3054 6826 771 256 1062 2.2e−107 Description gp: [GI:d1046030:g5360854] [LN:D86934] [AC:D86934] [PN:glycerophosphoryldiester phosphodiesterase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N039; putative] [LE:46160] [RE:>46792] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24407828_c3_1230 3055 6827 2013 670 157 2.1e−07 Description gp: [GI:g4049717] [LN:AF063866] [AC:AF063866] [PN:ORF MSV156 hypothetical protein] [GN:MSV156] [OR:Melanoplus sanguinipes entomopoxvirus] [DB:genpept-vrl] [DE:Melanoplus sanguinipes entomopoxvirus, complete genome.] [LE:140126] [RE:143509] [DI:direct]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24409452_c3_1294 3056 6828 432 143 132 7.6e−09 Description sp:[LN:Y577_METJA] [AC:Q57997] [GN:MJ0577] [OR:METHANOCOCCUS JANNASCHII] [DE:PROTEIN MJ0577] [SP:Q57997] [DB:swissprot] >pir:[LN:A64372] [AC:A64372] [PN:hypothetical protein homolog MJ0577] [CL:Escherichia coli ybdQ protein] [OR:Methanococcus jannaschii] [DB:pir2] [MP:F0R512975–513463] >gp:[GI:g1591284] [LN:U67506] [AC:U67506:L77117] [PN:conserved hypothetical protein] [GN:MJ0577] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 48 of 150 of the complete genome.] [NT:similar to SP:P42297 PID:603780 PID:849027] [LE:8204] [RE:8692] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24411262_f1_37 3057 6829 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24412507_f2_339 3058 6830 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24414680_c1_843 3059 6831 1287 428 141 1.3e−05 Description gp:[GI:g1041785] [LN:PYU36927] [AC:U36927] [PN:rhoptry protein] [FN:erythrocyte invasion and possible binding] [OR:Plasmodium yoelii] [DB:genpept-inv1] [DE:Plasmodium yoelii rhoptry protein gene, partial cds.] [LE:<1] [RE:7206] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24414818_f3_516 3060 6832 441 146 94 0.00083 Description sp:[LN:PHNB_(—) ECOLI] [AC:P16681] [GN:PHNB] [OR:ESCHERICHIA COLI] [DE:PHNB PROTEIN] [SP:P16681] [DB:swissprot] >pir:[LN:C35718] [AC:C35718:S56335:B65220] [PN:phnB protein] [GN:phnB] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g147195] [LN:ECOPHNAQ] [AC:J05260] [OR:Escherichia coli] [SR:E.coli (strain B) DNA] [DB:genpept-bct1] [DE:E.coli psiD locus containing alkylphosphonate uptake (phn) genes Athrough Q, complete cds.] [NT:phnB protein] [LE:3767] [RE:4210] [DI:direct] >gp:[GI:g536951] [LN:ECOUW93] [AC:U14003] [GN:phnB] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [LE:16226] [RE:16669] [DI:complement] >gp:[GI:g1790546] [LN:AE000483] [AC:AE000483:U00096] [PN:orf, hypothetical protein] [GN:phnB] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 373 of 400 of the complete genome.] [NT:f147; 100 pct identical amino acid sequence and] [LE:97] [RE:540] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24424092_c2_1017 3061 6833 522 173 104 0.00027 Description gp:[GI:e1488089:g5051453] [LN:NME242841] [AC:AJ242841] [PN:hypothetical protein] [OR:Neisseria meningitidis] [DB:genpept-bct1] [DE:Neisseria meningitidis DNA for opcA region, strain Z2491.] [NT:ORFA] [LE:10162] [RE:10707] [DI:direct] >gp:[GI:e1488089:g5051453] [LN:NME242841] [AC:AJ242841] [PN:hypothetical protein] [OR:Neisseria meningitidis] [DB:genpept] [DE:Neisseria meningitidis DNA for opcA region, strain Z2491.] [NT:orfA] [LE:10162] [RE:10707] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24430392_c1_856 3062 6834 681 226 1116 4.1e−113 Description sp:[LN:MERB_STAAU] [AC:P08653] [GN:MERB] [OR:STAPHYLOCOCCUS AUREUS] [EC:4.99.1.2] [DE:ALKYLMERCURY LYASE, (ORGANOMERCURIAL LYASE)] [SP:P08653] [DB:swissprot] >pir: [LN:F29504] [AC:F29504] [PN:alkylmercury lyase,] [CL:alkylmercury lyase] [OR:Staphylococcus aureus] [EC:4.99.1.2] [DB:pir2] >gp:[GI:g459908] [LN:L29436] [AC:L29436:M15048:N00048] [PN:organomercurial lyase] [GN:merB] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [LE:4873] [RE:5523] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24431502_c3_1121 3063 6835 846 281 347 1.3e−31 Description gp:[GI:g3818562] [LN:AF076529] [AC:AF076529] [PN:ATP binding protein BviA] [GN:bviA] [OR:Butyrivibrio fibrisolvens] [DB:genpept-bct2] [DE:Butyrivibrio fibrisolvens response regulator homolog gene, partial cds; histidine kinase homolog, butyrivibriocin AR10 operon, complete sequence; and unknown gene.] [LE:2342] [RE:3187] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24432662_c2_1052 3064 6836 969 322 301 2.3e−47 Description sp:[LN:YACK_(—) ECOLI] [AC:P36649:P75655] [GN:YACK] [OR:ESCHERICHIA COLI] [DE:PROBABLE 53.4 KD BLUE-COPPER PROTEIN YACQ PRECURSOR] [SP:P36649:P75655] [DB:swissprot] >pir:[LN:C64735] [AC:C64735:S45200] [PN:probable copper-binding protein yacK] [GN:yacK] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1786314] [LN:AE000121] [AC:AE000121:U00096] [PN:orf, hypothetical protein] [GN:yacK] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 11 of 400 of the completegenome.] [NT:o516; 100 pct identical to 463 residues] [LE:9364] [RE:10914] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24475252_f1_1 3065 6837 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24486008_c2_1059 3066 6838 978 325 136 1.6e−06 Description gp:[GI:g4378164] [LN:AF102543] [AC:AF102543] [PN:unknown] [OR:Zymomonas mobilis] [DB:genpept-bct2] [DE:Zymomonas mobilis 5,10-methylenetetrahydrofolate reductase (metF)gene, partial cds; lipoprotein precursor (vacJ), ferredoxin-NADP+reductase (fpr), succinic semialdehyde dehydrogenase (gabD), thymidylate synthetase (thyA), gluconate permease (gntP), UTP-glucose-1-phosphate uridyltransferase, diaminopimelatedecarboxylase (lysA), arginosuccinate lyase (argH), NADH-dependent butanol dehydrogenase (yugJ), and morphine 6-dehydrogenase (mdh)genes, complete cds; tRNA-Ala gene, complete sequence; aminopeptidase N (pepN) gene, complete cds; and unknown genes.] [NT:zm4orf2] [LE:12502] [RE:13458] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24641941_f3_456 3067 6839 510 169 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24645817_c2_979 3068 6840 453 150 461 1.0e−43 Description gp:[GI:g143421] [LN:BACRGC] [AC:M57623:J05723] [PN:ribosomal protein L9] [GN:ribosomal protein L9] [OR:Bacillus stearothermophilus] [SR:B. stearothermophilus DNA] [DB:genpept-bct1] [DE:B. stearothermophilus ribosomal protein L9 gene, complete cds.] [LE:1] [RE:450] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24647142_c2_930 3069 6841 645 214 575 8.7e−56 Description gp:[GI:e352094:g2462707] [LN:SXLACRPH] [AC:Y14599] [PN:hypothetical protein] [GN:orf5] [OR:Staphylococcus xylosus] [DB:genpept-bct1] [DE:Staphylococcus xylosus lacR, lacP, lacH genes and 2 ORF's.] [LE:6476] [RE:7105] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24647292_f3_668 3070 6842 1275 424 1180 6.7e−120 Description sp:[LN:PBUX_BACSU] [AC:P42086] [GN:PBUX] [OR:BACILLUS SUBTILIS] [DE:XANTHINE PERMEASE] [SP:P42086] [DB:swissprot] >pir:[LN:S51310] [AC:S51310:E69673] [PN:xanthine permease pbuX] [GN:pbuX] [CL:xanthine permease pbuX] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1256618] [LN:BACYACA] [AC:L77246] [PN:transport protein] [GN:ypaQ] [FN:pyrimidine salvage] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis (YAC10-9 clone) DNA region between the serA and kdg loci.] [NT:26% of identity to the Bacillus caldolyticus uracil] [LE:2007] [RE:3323] [DI:direct] >gp:[GI:e1183652:g2634625] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:xanthine permease] [GN:pbuX] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 12 of 21): from 2195541 to 2409220.] [NT:alternate gene name:ypaQ] [SP:P42086] [LE:121829] [RE:123145] [DI:complement] >gp:[GI:g633170] [LN:BSXPTPBUX] [AC:X83878] [PN:xanthine permease] [GN:pbuX] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis xpt and pbuX genes.] [SP:P42086] [LE:938] [RE:2254] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24650427_f3_493 3071 6843 3126 1041 1653 2.3e−220 Description pir:[LN:F64114] [AC:F64114] [PN:type I site-specific deoxyribonuclease, chain hsdR] [GN:hsdR] [CL:DEAD/H box helicase homology] [OR:Haemophilus influenzae] [EC:3.1.21.3] [DB:pir2] >gp:(GI:g1574743] [LN:U32808] [AC:U32808:L42023] [PN:type I restriction enzyme (hsdR)] [GN:HI1285] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 123 of 163 of the completegenome.] [NT:similar to PID:1685100 percent identity:59.01;] [LE:5702] [RE:8869] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24783462_c2_1016 3072 6844 339 112 77 0.0086 Description gp:[GI:g2772544] [LN:STREMM40G] [AC:L46817] [PN:M-40 protein] [GN:emm40] [FN:antiphagocytic] [OR:Streptococcus pyogenes] [DB:genpept-bct2] [DE:Streptococcus pyogenes M-40 protein (emm40) gene, partial cds.] [LE:<1] [RE:>341] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24797126_f1_88 3073 6845 249 82 69 0.036 Description gp:[GI:g2772603] [LN:DMU85764] [AC:U85764] [PN:accessory gland protein Acp32CD] [GN:Acp32CD] [FN:responsible for physiological and behavioral] [OR:Drosophila melanogaster] [SR:fruit fly] [DB:genpept-inv1] [DE:Drosophila melanogaster accessory gland protein Acp32CD (Acp32CD) gene, partial cds.] [LE:74] [RE:>377] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24800412_c2_981 3074 6846 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24812927_f2_227 3075 6847 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24817142_c1_764 3076 6848 1947 648 3147 0.0 Description pir:[LN:A40585] [AC:A40585:A35406:S54711:A42295:S36024] [PN:DNA topoisomerase (ATP-hydrolyzing), chain B] [GN:gyrB] [CL:DNA topoisomerase (ATP-hydrolyzing) chain B] [OR:Staphylococcus aureus] [EC:5.99.1.3] [DB:pir1] >gp:[GI:g296395] [LN:SAGYRREC] [AC:X71437] [PN:DNA gyrase] [GN:gyrB] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S.aureus genes gyrB, gyrA and recF (partial).] [SP:P20832] [LE:282] [RE:2216] [DI:direct] >gp:[GI:d1001841:g540541] [LN:STAGYRABA] [AC:D10489] [PN:DNA gyrase B] [GN:gyrB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus [strain:ATCC12600) DNA] [DB:genpept-bct1] [EC:5.99.1.3] [DE:Staphylococcus aureus genes for DNA gyrase A and B, complete cds.] [LE:181] [RE:2115] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24847250_f2_320 3077 6849 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_24848452_c3_1175 3078 6850 792 263 223 1.7e−18 Description pir:[LN:H70089] [AC:H70089] [PN:hypothetical protein yycI] [GN:yycI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1011959:g1064811] [LN:BACGNTZA] [AC:D78193] [GN:yycI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 36kb sequence between gntZ and trnY genes encoding 34 ORFs.] [LE:31210] [RE:32052] [DI:complement] >gp:[GI:e1184764:g2636585] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yycI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [LE:149594] [RE:150436] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_254527_c2_1038 3079 6851 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25548452_f1_207 3080 6852 915 304 354 2.3e−32 Description pir:[LN:A69867] [AC:A69867] [PN:conserved hypothetical protein ykuT] [GN:ykuT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181925:g2632241] [LN:BS16829KB] [AC:AJ222587] [PN:YkuT protein] [GN:ykuT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 29kB DNA fragment from ykwC gene to cse15 gene.] [LE:25580] [RE:26383] [DI:complement] >gp:[GI:e1185011:g2633792] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykuT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:95836] [RE:96639] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25554012_c2_912 3081 6853 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25554675_c3_1094 3082 6854 927 308 179 2.5e−11 Description sp:[LN:SR40_YEAST] [AC:P32583] [GN:SRP40:YKR092C:YKR412A] [OR:SACCHAROMYCES CEREVISIAE] [SR:,BAKER'S YEAST] [DE:SUPPRESSOR PROTEIN SRP40] [SP:P32583] [DB:swissprot] >pir:[LN:538170] [AC:S38170:S40645:S37702] [PN:SRP40 protein:protein YKR092c:protein YKR412a] [GN:SRP40] [OR:Saccharomyces cerevisiae] [DB:pir2] [MP:11R] >gp:[GI:g450552] [LN:SCDNACHXI] [AC:X73541] [OR:Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [DE:S.cerevisiae DNA of chromosome XI, right arm.] [NT:ORF YKR412] [SP:P32583] [LE:1952] [RE:3172] [DI:complement] >gp:[GI:g486581] [LN:SCYKR092C] [AC:Z28317:Y13137] [GN:SRP40] [OR:Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [DE:S.cerevisiae chromosome XI reading frame ORF YKR092c.] [NT:ORF YKR092c] [SP:P32583] [LE:400] [RE:1620] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25565637_f2_257 3083 6855 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25583568_f1_12 3084 6856 363 120 71 0.022 Description pir:[LN:T03326] [AC:T03326] [PN:gene 119 protein] [GN:119] [OR:Lactococcus phage bIL170] [DB:pir2] >gp:[GI:g3282279] [LN:AF009630] [AC:AF009630] [PN:119] [GN:119] [OR:bacteriophage bIL170] [DB:genpept-phg] [DE:Bacteriophage bIL170, complete genome.] [LE:15351] [RE:15644] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25587802_c1_809 3085 6857 777 258 114 0.00010 Description sp:[LN:FLIZ_BORBU] [AC:Q44904:Q44764] [GN:FLIZ:BB0276] [OR:BORRELIA BURGDORFERI] [SR:,LYME DISEASE SPIROCHETE] [DE:FLAGELLAR PROTEIN FLIZ] [SP:Q44904:Q44764] [DB:swissprot] >pir:[LN:D70134] [AC:D70134] [PN:flagellar biosynthesis protein (fliZ) homolog] [OR:Borrelia burgdorferi] [SR:,Lyme disease spirochete] [DB:pir2] >gp:[GI:g1165261] [LN:BBU43739] [AC:U43739] [PN:FliZ] [GN:fliZ] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete strain=B31] [DB:genpept-bct1] [DE:Borrelia burgdorferi fesmid clone 31, complete sequence.] [NT:flagellar protein required for flagella formation] [LE:9847] [RE:10473] [DI:complement] >gp:[GI:g2688190] [LN:AE001137] [AC:AE001137:AE000783] [PN:flagellar biosynthesis protein (fliZ)] [GN:BB0276] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 23 of 70) of the complete genome.] [NT:similar to PID:1165261 PID:1185058 SP:Q44904] [LE:15237] [RE:15863] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25642038_f3_481 3086 6858 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25660880_c2_975 3087 6859 177 58/ Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25667767_c3_1114 3088 6860 1191 396 907 5.7e−91 Description pir:[LN:B69847] [AC:B69847] [PN:cystathionine beta-lyase homolog yjcJ] [GN:yjcJ] [CL:O-succinylhomoserine (thiol)-lyase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183208:g2633542] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjcJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to cystathionine beta-lyase] [LE:64687] [RE:65859] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25679712_f3_626 3089 6861 660 219 153 2.0e−09 Description gp:[GI:e1315386:g3417427] [LN:SPBC30B4] [AC:AL031262] [PN:hypothetical protein] [GN:SPBC30B4.01c] [OR:Schizosaccharomyces pombe] [SR:fission yeast] [DB:genpept-pln1] [DE:S. pombe chromosome II cosmid c30B4.] [NT:SPBC30B4.01c, len:344aa, similarity, YNL283C,] [LE:<1] [RE:1034] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25792911_c1_777 3090 6862 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_25831512_c3_1105 3091 6863 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26172675_f1_124 3092 6864 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26181512_c2_1003 3093 6865 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26198535_c3_1116 3094 6866 765 254 136 5.4e−07 Description pir:[LN:D70817] [AC:D70817] [PN:hypothetical protein Rv1716] [GN:Rv1716] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e1299966:g3261548] [LN:MTV048] [AC:AL022003:AL123456] [PN:hypothetical protein Rv1716] [GN:Rv1716] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 77/162.] [NT:Rv1716, (MTV048.03,MTCY04C12.01) len:276. Unknown] [LE:1750] [RE:2580] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26214002_f3_647 3095 6867 870 289 627 2.7e−61 Description sp:[LN:SPOJ_BACSU] [AC:P26497] [GN:SPO0J] [OR:BACILLUS SUBTILIS] [DE:STAGE 0 SPORULATION PROTEIN J] [SP:P26497] [DB:swissprot] >pir:[LN:A38536] [AC:I40445:A38536:S66020:E69710:S18081] [PN:Soj antagonist/chromosome positioning and transport protein spo0J:spo0J93 protein:stage 0 sporulation protein J93] [GN:spo0J:spo0J93] [CL:Bacillus subtilis transport protein spo0J] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005768:g467380] [LN:BAC180K] [AC:D26185] [PN:stage 0 sporultion] [GN:spo0J] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:53552] [RE:54400] [DI:complement] >gp:[GI:g40031] [LN:BSORIGS] [AC:X62539] [GN:spoOJ93] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genes rpmH, rnpA, 50kd, gidA and gidB.] [SP:P26497] [LE:9000] [RE:9848] [DI:direct] >gp:[GI:e1184822:g2636643] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:antagonist of Soj] [GN:spo0J] [FN:involved in positionning part of the chromosome] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P26497] [LE:205484] [RE:206332] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26261512_f2_275 3096 6868 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26351510_f2_375 3097 6869 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26365911_f1_165 3098 6870 561 186 203 2.3e−16 Description pir:[LN:E69779] [AC:E69779] [PN:transcription regulator TetR/AcrR family homolog ydeS] [GN:ydeS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020119:g1881339] [LN:AB001488] [AC:AB001488] [GN:ydeS] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE TRANSCRIPTIONAL REGULATOR, SIMILAR TO] [LE:111555] [RE:112151] [DI:direct] >gp:[GI:e1182498:g2632832] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydeS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:similar to transcriptional regulator (TetR/AcrR] [LE:175301] [RE:175897] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26597010_f3_530 3099 6871 186 61 103 2.9e−05 Description sp:[LN:Y4UH_RHISN] [AC:Q53200] [GN:Y4UH] [OR:RHIZOBIUM SP] [SR:NGR234,] [DE:PUTATIVE INSERTION SEQUENCE ATP-BINDING PROTEIN Y4UH] [SP:Q53200] [DB:swissprot] >gp:[GI:e213893:g1486429] [LN:RSPNGR234] [AC:Z68203] [PN:transposase homologue] [GN:orf10] [OR:Rhizobium sp.] [SR:Rhizobium sp] [DB:genpept-bct1] [DE:Rhizobium sp. plasmid NGR234a DNA.] [NT:putative] [SP:Q53200] [LE:13370] [RE:14116] [DI:complement] >gp:[GI:g2182658] [LN:AE000099] [AC:AE000099:U00090] [PN:Y4uH] [GN:y4uH] [OR:Rhizobium sp. NGR234] [DB:genpept-bct2] [DE:Rhizobium sp. NGR234 plasmid pNGR234a, section 36 of 46 of the complete plasmid sequence.] [NT:putative insertion sequence ATP-binding protein] [LE:8181] [RE:8927] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_266000015_f1_162 3100 6872 354 117 280 1.6e−24 Description sp:[LN:RNPA_BACSU] [AC:P25814] [GN:RNPA] [OR:BACILLUS SUBTILIS] [EC:3.1.26.5] [DE:RIBONUCLEASE P PROTEIN COMPONENT, (PROTEIN C5) (RNASE P)] [SP:P25814] [DB:swissprot] >pir:[LN:S66029] [AC:S66029:D69693] [PN:ribonuclease P protein component rnpA] [GN:rnpA] [CL:ribonuclease P, protein component] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005777:g467389] [LN:BAC180K] [AC:D26185] [PN:protein component of ribonuclease P] [GN:rnpA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:62749] [RE:63099] [DI:complement] >gp:[GI:e1184831:g2636652] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:ribonuclease P (protein component)] [GN:rnpA] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.1.26.5] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P25814] [LE:214681] [RE:215031] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26604502_f2_390 3101 6873 159 52 205 1.4e−16 Description sp:[LN:RL34_BACST] [AC:P23376] [GN:RPMH] [OR:BACILLUS STEAROTHERMOPHILUS] [DE:50S RIBOSOMAL PROTEIN L34] [SP:P23376] [DB:swissprot] >pir:[LN:C48396] [AC:C48396] [PN:ribosomal protein L34] [CL:Escherichia coli ribosomal protein L34] [OR:Bacillus stearothermophilus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26615636_f1_194 3102 6874 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26756660_c2_950 3103 6875 651 216 19 0.00035 Description pir:[LN:B69858] [AC:B69858] [PN:hypothetical protein yknW] [GN:yknW] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185024:g2633805] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:yknW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:108197] [RE:108892] [DI:direct] >gp:[GI:g3282118] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:YknW] [GN:yknW] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [LE:8685] [RE:9380] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_26759707_c1_830 3104 6876 450 149 504 2.9e−48 Description gp:[GI:d1046006:g5360830] [LN:D86934] [AC:D86934] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N044] [LE:28947] [RE:29264] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_270890_c3_1162 3105 6877 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2745462_c1_691 3106 6878 642 213 116 0.00066 Description gp:[GI:e1407824:g4493894] [LN:PFMAL3P2] [AC:AL034558] [GN:MAL3P2.16] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P2, complete sequence.] [NT:predicted using hexExon; MAL3P2.16 (PF0235w),] [LE:73132:73647] [RE:73149:77270] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2782563_c3_1129 3107 6879 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2819632_f1_105 3108 6880 387 128 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2867812_c2_1060 3109 6881 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2921941_c1_680 3110 6882 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2925292_f2_325 3111 6883 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2931557_c3_1158 3112 6884 1119 372 1692 3.7e−174 Description sp:[LN:RECF_STAAU] [AC:P29232] [GN:RECF] [OR:STAPHYLOCOCCUS AUREUS] [DE:RECF PROTEIN] [SP:P29232] [DB:swissprot] >pir:[LN:C40585] [AC:S54710:C40585:C42295:S36023] [PN:recF protein] [CL:recF protein] [OR:Staphylococcus aureus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_29320127_c3_1181 3113 6885 390 129 677 1.4e−66 Description gp:[GI:d1046033:g5360857] [LN:D86934] [AC:D86934] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF CN041] [LE:47629] [RE:>48018] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_2946092_c2_1006 3114 6886 435 144 97 0.00051 Description pir:[LN:F71224] [AC:F71224] [PN:hypothetical protein PH0057] [GN:PH0057] [CL:protein kinase C inhibitor:histidine triad homology] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030068:g3256442] [LN:AP000001] [AC:AP000001:AB009465:AB009464:AB009466:AB009467:AB009468:AB009469] [PN:168aa long hypothetical protein] [GN:PH0057] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).] [NT:similar to owl:HPAE00058613 percent identity:] [LE:49752] [RE:50258] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_29532926_c3_1128 3115 6887 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_29860902_c3_1115 3116 6888 2277 758 1816 2.7e−187 Description pir:[LN:C69657] [AC:C69657] [PN:cobalamin-independent methionine synthase metC] [GN:metC] [CL:cobalamin-independent methionine synthase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181518:g2632038] [LN:BSAJ2571] [AC:AJ002571] [PN:MetC] [GN:metC] [FN:involved in methionine metabolism] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [SP:P80877] [LE:35445] [RE:37733] [DI:complement] >gp:[GI:e1183338:g2633672] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:cobalamin-independent methionine synthase] [GN:metC] [FN:methionine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [SP:P80877] [LE:188394] [RE:190682] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3007887_f1_113 3117 6889 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_30080255_f1_172 3118 6890 384 127 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_30084637_f3_567 3119 6891 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_30086682_c2_1041 3120 6892 732 243 1134 5.1e−115 Description pir:[LN:C29504] [AC:C29504] [PN:hypothetical 24K protein (mer operon)] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g459905] [LN:L29436] [AC:L29436:M15048:N00048] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [NT:ORF4] [LE:1936] [RE:2616] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_30111718_c2_1051 3121 6893 2124 707 1980 7.5e−211 Description sp:[LN:COPB_ENTHR] [AC:P05425] [GN:COPB] [OR:ENTEROCOCCUS HIRAE] [EC:3.6.1.36] [DE:COPPER/POTASSIUM-TRANSPORTING ATPASE B,] [SP:P05425] [DB:swissprot] >pir:[LN:B45995] [AC:B45995] [PN:copper-transporting ATPase, copB] [GN:copB] [CL:Enterococcus copper-transporting ATPase copB: ATPase nucleotide-binding domain homology:ATPase transduction domain homology] [OR:Enterococcus hirae] [EC:3.6.1.-] [DB:pir1] >gp:(GI:g290643] [LN:ENECOPPUMP] [AC:L13292:J02729] [PN:ATPase] [GN:copB] [FN:copper pump] [OR:Enterococcus hirae] [SR:Enterococcus hirae DNA] [DB:genpept-bct1] [DE:Enterococcus hirae ATPase (copA) gene, complete cds; ATPase (copB)gene, complete cds.] [NT:putative] [LE:2273] [RE:4510] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_30516552_f1_160 3122 6894 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_31267125_c3_1216 3123 6895 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_31443827_f2_419 3124 6896 510 169 563 1.6e−54 Description sp:[LN:SSB_BACSU] [AC:P37455] [GN:SSB] [OR:BACILLUS SUBTILIS] [DE:SINGLE-STRAND BINDING PROTEIN (SSB) (HELIX-DESTABILIZING PROTEIN)] [SP:P37455] [DB:swissprot] >pir:[LN:S66014] [AC:S66014:F69718] [PN:single strand DNA binding protein ssb] [GN:ssb] [CL:single-stranded DNA-binding protein: single-stranded DNA-binding protein homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005762:g467374] [LN:BAC180K] [AC:D26185] [PN:single strand DNA binding protein] [GN:ssb] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:46882] [RE:47400] [DI:complement] >gp:[GI:e1184816:g2636637] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:single-strand DNA-binding protein] [GN:ssb] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P37455] [LE:198814] [RE:199332] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_31535626_f3_569 3125 6897 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3158177_f2_232 3126 6898 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_32062762_c2_954 3127 6899 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_32226577_c3_1254 3128 6900 354 117 596 5.2e−58 Description pir:[LN:B29504] [AC:B29504] [PN:hypothetical 18K protein (mer operon)] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g459904] [LN:L29436] [AC:L29436:M15048:N00048] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [NT:ORF3] [LE:1454] [RE:1939] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_32423410_c1_718 3129 6901 210 69 167 1.5e−12 Description sp:[LN:YG27_ARCFU] [AC:O28646] [GN:AF1627] [OR:ARCHAEOGLOBUS FULGIDUS] [DE:HYPOTHETICAL TRANSCRIPTIONAL REGULATOR AF1627] [SP:O28646] [DB:swissprot] >pir:[LN:B69453] [AC:B69453] [PN:repressor protein homolog] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2648932] [LN:AE000990] [AC:AE000990:AE000782] [PN:repressor protein] [GN:AF1627] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 117 of 172 of the complete genome.] [NT:similar to GB:L77117 PID:1590997 percent identity:] [LE:7667] [RE:7882] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_32577_f3_495 3130 6902 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3320317_f3_648 3131 6903 237 78 150 9.5e−11 Description gp:[GI:g2109447] [LN:SPDNAARG] [AC:AF000658] [FN:unknown] [OR:Streptococcus pneumoniae] [DB:genpept-bct2] [DE:Streptococcus pneumoniae R801 tRNA-Arg gene, partial sequence, and putative serine protease (sphtra), SPSpoJ (spspoJ), initiator protein (spdnaa) and beta subunit of DNA polymerase III (spdnan)genes, complete cds.] [NT:ORFX] [LE:5708] [RE:5902] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33228180_f1_192 3132 6904 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33244187_c3_1168 3133 6905 1989 662 1592 1.5e−163 Description sp:[LN:YYBT_BACSU] [AC:P37484] [GN:YYBT] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 74.3 KD PROTEIN IN RPLI-COTF INTERGENIC REGION] [SP:P37484] [DB:swissprot] >pir:[LN:S65976] [AC:S65976:G70088] [PN:hypothetical protein yybT] [GN:yybT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005724:g467336] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:11639] [RE:13618] [DI:complement] >gp:[GI:e1184777:g2636598] [LN:BSUB0021) [AC:Z99124:AL009126] [GN:yybT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P37484] [LE:163571] [RE:165550] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33261588_c2_1004 3134 6906 690 229 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33261637_c3_1237 3135 6907 543 180 79 0.0068 Description gp:[GI:g765070] [LN:STAATL] [AC:L41499] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain 8325/4) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus ORF1, partial cds, ORF2, ORF3, autolysin(at1) genes, complete cds.] [NT:ORF1] [LE:<1] [RE:249] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33337760_c2_983 3136 6908 705 234 1191 4.6e−121 Description gp:[GI:g5114230] [LN:AF136709] [AC:AF136709] [PN:response regulator YycF] [GN:yycF] [OR:Staphylococcus aureus] [DB:genpept] [DE:Staphylococcus aureus response regulator YycF (yycF) and histidinekinase YycG (yycG) genes, complete cds.] [LE:649] [RE:1350] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33720053_c1_808 3137 6908 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33790702_f3_612 3138 6910 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33867212_f3_548 3139 6911 339 112 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_33994126_f3_633 3140 6912 144 47 47 0.045 Description gp:[GI:g1204027] [LN:UREUREASEA] [AC:L40489] [OR:Ureaplasma urealyticum] [SR:Ureaplasma urealyticum (strain 7) DNA] [B:genpept-bct1] [DE:Ureaplasma urealyticum strain 7 urease operon encoding ORF1, ureA, ureB, ureC, ureE, ureF, and ureG, complete cds, and ureD genes, 5′ end of cds.] [NT:ORF1; Protein sequence is in conflict with the] [LE:136] [RE:468] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34016880_f2_333 3141 6913 2028 675 3474 0.0 Description pir:[LN:JQ0774] [AC:JQ0774] [PN:penicillin-binding protein mecA, low-affinity:penicillin-binding protein 2′] [GN:mecA] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g46994] [LN:SEMECAPB] [AC:X52592] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis mecA gene for PBP2′ (penicillin binding protein 2′).] [NT:PBP2′ (AA1–668)] [LE:141] [RE:2147] [DI:direct] >gp:[GI:d1046026:g5360850] [LN:D86934] [AC:D86934] [PN:penicillin binding protein 2] [GN:mecA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N058] [LE:43471] [RE:45477] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3401887_f1_225 3142 6914 1485 494 1969 1.7e−203 Description pir:[LN:DEBSMP] [AC:S66039:S12623:D69638] [PN:IMP dehydrogenase,:inositol-monophosphate dehydrogenase guaB] [GN:guaB] [CL:IMP dehydrogenase:CBS homology] [OR:Bacillus subtilis] [EC:1.1.1.205] [DB:pir1] >gp:[GI:d1005787:g467399] [LN:BAC180K] [AC:D26185] [PN:IMP dehydrogenase] [GN:guaB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:79515] [RE:80981] [DI:direct] >gp:[GI:e1181942:g2632276] [LN:BSUB0001] [AC:Z99104:AL009126] [PN:inositol-monophosphate dehydrogenase] [GN:guaB] [FN:GMP biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.205] [DE:Bacillus subtilis complete genome (section 1 of 21): from 1 to 213080.] [NT:alternate gene name:guaA] [SP:P21879] [LE:15913] [RE:17379] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34023251_f2_389 3143 6915 198 65 68 0.045 Description gp:[GI:g205733] [(LN:RATNKBNT4] [AC:M21187:J03185:M18622] [OR:Rattus norvegicus] [SR:Rat testis DNA, clone rNT19] [DB:genpept-rod] [DE:Rat neurotensin/neuromedin N gene, exon 4.] [NT:preproneurotensin/neuromedin N] [LE:M21218.1:8:11] [RE:232:163] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34160260_f2_322 3144 6916 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34178401_f3_462 3145 6917 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34179761_c2_903 3146 6918 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34180340_f2_398 3147 6919 711 236 609 2.2e−59 Description gp:[GI:d1025734:g2879914] [LN:D85752] [AC:D85752] [GN:bacH] [OR:Enterococcus faecalis] [SR:Enterococcus faecalis plasmid:pPD1 DNA] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pPD1 bacA, bacB, bacC, bacD, bacE, bacF, bacG, bacH and bacI genes, complete cds.] [LE:7148] [RE:7735] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34182952_f3_625 3148 6920 402 133 88 0.013 Description pir:[LN:G69850] [AC:G69850] [PN:hypothetical protein yjhA] [GN:yjhA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183238:g2633572] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjhA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [LE:94377] [RE:95018] [DI:direct] >gp:[GI:g2612890] [LN:AF015825] [AC:AF015825] [PN:putative lipoprotein] [GN:yjhA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 168 cotT-rapA region sequence.] [LE:8537] [RE:9178] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34266582_c2_965 3149 6921 1158 385 1796 3.6e−185 Description sp:[LN:DP3B_STAAU] [AC:P50029] [GN:DNAN] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.7.7.7] [DE:DNA POLYMERASE III, BETA CHAIN,] [SP:P50029] [DB:swissprot] >pir:[LN:S54708] [AC:S54708] [PN:DNA-directed DNA polymerase, III beta chain:dnaN] [GN:dnaN] [CL:DNA-directed DNA polymerase III beta chain] [OR:Staphylococcus aureus] [EC:2.7.7.7] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34414012_f1_211 3150 6922 273 90 336 1.8e−30 Description pir:[LN:S66013] [AC:S66013:S11368:A69701] [PN:ribosomal protein S18 (rpsR):ribosomal protein BS21] [GN:rpsR] [CL:Escherichia coli ribosomal protein S18] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005761:g467373] [LN:BAC180K] [AC:D26185] [PN:ribosomal protein S18] [GN:rpsR] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:46599] [RE:46844] [DI:complement] >gp:[GI:e1184815:g2636636] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:ribosomal protein S18] [GN:rpsR] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P21475] [LE:198531] [RE:198776] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34414187_c1_692 3151 6923 399 132 152 5.8e−11 Description pir:[LN:B69778] [AC:B69778] [PN:hypothetical protein ydeH] [GN:ydeH] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020108:g1881328] [LN:AB001488] [AC:AB001488] [GN:ydeH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:FUNCTION UNKNOWN.] [LE:100881] [RE:101327] [DI:direct] >gp:[GI:e1182486:g2632820] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydeH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [LE:164626] [RE:165072] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34417552_f3_615 3152 6924 381 126 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34417813_c2_985 3153 6925 807 268 851 4.9e−85 Description pir:[LN:A70090] [AC:A70090] [PN:hypothetical protein yycJ] [GN:yycJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1011958:g1064810] [LN:BACGNTZA] [AC:D78193] [GN:yycJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 36kb sequence between gntZ and trnY genes encoding 34 ORFs.] [LE:30382] [RE:31188] [DI:complement] >gp:[GI:e1184763:g2636584] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yycJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [LE:148766] [RE:149572] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34580342_c1_730 3154 6926 771 256 802 7.7e−80 Description pir:[LN:A70001] [AC:A70001] [PN:ABC transporter (ATP-binding protein) homolog ytsC] [GN:ytsC] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185911:g2635522] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:112638] [RE:113399] [DI:complement] >gp:[GI:g2293177] [LN:AF008220] [AC:AF008220] [PN:transporter] [GN:ytsC] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:67028] [RE:67789] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34631527_f1_20 3155 6927 834 277 609 2.2e−59 Description gp:[GI:d1045999:g5360823] [LN:D86934] [AC:D86934] [PN:IS150-like transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N028; putative] [LE:<20180] [RE:20578] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34643751_c1_688 3156 6928 591 196 910 2.8e−91 Description gp:[GI:g1916316] [LN:SAU92441] [AC:U92441:X85029] [PN:alkyl hydroperoxide reductase subunit C] [GN:ahpC] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus alkyl hydroperoxide reductase subunit C(aphC) and subunit F (aphF) genes, complete cds.] [NT:AhpC] [LE:791] [RE:1360] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_34664700_f2_393 3157 6929 861 286 617 3.1e−60 Description sp:[LN:YYAA_BACSU] [AC:P37524] [GN:YYAA] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 32.8 KD PROTEIN IN SPO0J-GIDB INTERGENIC REGION] [SP:P37524] [DB:swissprot] >pir:[LN:I40442] [AC:I40442:S66023:H70083:S18078] [PN:DNA-binding protein Spo0J-like homolog yyaA:probable DNA binding protein (replication origin region)] [GN:yyaA] [CL:Bacillus subtilis transport protein spo0J] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005771:g467383] [LN:BAC180K] [AC:D26185] [PN:DNA binding protein (probable)] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:55893] [RE:56744] [DI:complement] >gp:[GI:g40028] [LN:BSORIGS] [AC:X62539] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genes rpmH, rnpA, 50kd, gidA and gidB.] [NT:unnamed protein product] [SP:P37524] [LE:6656] [RE:7507] [DI:direct] >gp:[GI:e1184825:g2636646] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yyaA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to DNA-binding protein Spo0J-like] [SP:P37524] [LE:207825] [RE:208676] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35157813_f2_244 3158 6930 519 172 473 5.6e−45 Description sp:[LN:ATDA_ECOLI] [AC:P37354] [GN:SPEG] [OR: ESCHERICHIA COLI] [EC:2.3.1.57] [DE:ACETYLTRANSFERASE) (SAT)] [SP:P37354] [DB:swissprot] >gp:[GI:d1016007:g1742583] [LN:D90799] [AC:D90799:AB001340] [PN:Spermidine N1-acetyltransferase (EC 2.3.1.57)] [GN:speG] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E.coli genomic DNA, Kohara clone #308(35.3–35.7 min).] [NT:ORF_ID:o309#16; similar to [SwissProt Accession] [LE:<18154] [RE:18711] [DI:direct] >gp:[GI:d1016029:g1742606] [LN:D90800] [AC:D90800:AB001340] [PN:Spermidine N1-acetyltransferase (EC 2.3.1.57)] [GN:speG] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E.coli genomic DNA, Kohara clone #309(35.4–35.7 min.).] [ENT:ORF_ID:o309#16; similar to [SwissProt Accession] [LE:<14930] [RE:15487] [DI:direct] >gp:[GI:d1016031:g1742609] [LN:D90801] [AC:D90801:AB001340] [PN:Spermidine N1-acetyltransferase (EC 2.3.1.57)] [GN:speG] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone_lib:Kohara lambda minise] [DB:genpept-bct1] [DE:E.coli genomic DNA, Kohara clone #310(35.7–36.0 min.).] [NT:ORF_ID:o309#16; similar to [SwissProt Accession] [LE:<814] [RE:1371] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35324092_c1_772 3159 6931 987 328 219 9.3e−28 Description sp:[LN:MET2_YEAST] [AC:P08465] [GN:MET2:YNL277W:N0615] [OR:SACCHAROMYCES CEREVISIAE] [SR:,BAKER'S YEAST] [EC:2.3.1.31] [DE:ACETYLASE)] [SP:P08465] [DB:swissprot] >pir:[LN:S63251] [AC:S63251:A27163] [PN:homoserine O-acetyltransferase,:protein N0615:protein YNL277w] [GN:MET2] [CL:homoserine acetyltransferase] [OR:Saccharomyces cerevisiae] [EC:2.3.1.31] [DB:pir2] [MP:14L] >gp:[GI:e239735:g1302344] [LN:SCYNL277W] [AC:Z71553:Y13139] [GN:MET2] [OR:Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [DE:S.cerevisiae chromosome XIV reading frame ORF YNL277w.] [NT:ORF YNL277w] [SP:P08465] [LE:896] [RE:2356] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35334686_f2_331 3160 6932 1659 552 1253 1.2e−127 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35343807_f1_220 3161 6933 237 78 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35369052_c1_774 3162 6934 1404 467 1261 1.8e−128 Description gp:[GI:g4416322] [LN:AF106032] [AC:AF106032] [PN:replicative helicase] [GN:dnaB] [OR:Bacillus stearothermophilus] [DB:genpept-bct2] [DE:Bacillus stearothermophilus replicative helicase (dnaB) gene, complete cds.] [NT:5′- 3′ helicase; similar to Bacillus subtilis DnaC;] [LE:1] [RE:1365] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35554635_c2_1001 3163 6935 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35944052_c1_682 3164 6936 690 229 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35978127_f3_661 3165 6937 777 258 559 4.3e−54 Description sp:[LN:YWCG_BACSU] [AC:P39605] [GN:YWCG:IPA-43D] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 28.3 KD PROTEIN IN QOXD-VPR INTERGENIC REGION] [SP:P39605] [DB:swissprot] >pir:[LN:S39698] [AC:S39698:B70053] [PN:NADPH-flavin oxidoreductase homolog ywcG:protein ipa-43d] [GN:ywcG] [CL:NADPH-flavin oxidoreductase homolog] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g413967] [LN:BSGENR] [AC:X73124] [GN:ipa-43d] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic region (325 to 333).] [SP:P39605] [LE:45340] [RE:46089] [DI:direct] >gp:[GI:e1186310:g2636346] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywcG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:alternate gene name:ipa-43d; similar to] [SP:P39605] [LE:111873] [RE:112622] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35984430_f2_444 3166 6938 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_35991677_c2_973 3167 6939 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36135952_f2_327 3168 6940 1650 549 2777 4.0e−289 Description gp:[GI:d1046002:g5360826] [LN:D86934] [AC:D86934] [PN:site-specific recombinase] [GN:ccrB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N037; cassette chromosome recombinase B] [LE:25508] [RE:27136] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36147301_f3_670 3169 6941 237 78 78 0.0090 Description sp:[LN:COTE_BACSU] [AC:P14016] [GN:COTE] [OR:BACILLUS SUBTILIS] [DE:SPORE COAT PROTEIN E] [SP:P14016] [DB:swissprot] >pir:[LN:A31245] [AC:A31245:B69605] [PN:outer spore coat protein cotE] [GN:cotE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1200225] [LN:BSCOTE] [AC:X13009] [PN:coat protein] [GN:cotE] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis cotE gene for 21kD coat protein.] [SP:P14016] [LE:390] [RE:935] [DI:direct] >gp:[GI:e1185294:g2634075] [LN:BSUB0009] [AC:Z99112:AL009126] [PN:morphogenic protein] [GN:cotE] [FN:outer coat assembly] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 9 of 21): from 1598421 to 1807200.] [SP:P14016] [LE:176015] [RE:176560] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36211052_c1_855 3170 6942 1662 553 2755 8.5e−287 Description sp:[LN:MERA_STAAU] [AC:P08663] [GN:MERA] [OR:STAPHYLOCOCCUS AUREUS] [EC:1.16.1.1] [DE:MERCURIC REDUCTASE, (HG(II) REDUCTASE)] [SP:P08663] [DB:swissprot] >pir:[LN:E29504] [AC:E29504] [PN:mercury(II) reductase,:Hg(II) reductase:mercuric reductase] [GN:merA] [CL:Bacillus mercury(II) reductase:dihydrolipoamide dehydrogenase homology:heavy-metal-associated homology] [OR:Staphylococcus aureus] [EC:1.16.1.1] [DB:pir2] >gp:[GI:g459907] [LN:L29436] [AC:L29436:M15048:N00048] [PN:mercuric reductase] [GN:merA] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [LE:3148] [RE:4791] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36225427_f2_319 3171 6943 615 204 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36226501_c2_1018 3172 6944 891 296 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36228126_f2_392 3173 6945 1896 631 2407 6.42−250 Description sp:[LN:GIDA_BACSU] [AC:P25812] [GN:GIDA] [OR:BACILLUS SUBTILIS] [DE:GLUCOSE INHIBITED DIVISION PROTEIN A] [SP:P25812] [DB:swissprot] >pir:[LN:BWBSGA] [AC:I40440:566025:G69631:JQ1216:S18076] [PN:glucose-inhibited division protein gidA] [GN:gidA] [CL:gidA protein] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:d1005773:g467385] [LN:BAC180K] [AC:D26185] [PN:unknown] [GN:gidA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:57599] [RE:59485] [DI:complement] >gp:[GI:g40026] [LN:BSORIGS] [AC:X62539] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genes rpmH, rnpA, 50kd, gidA and gidB.] [NT:homologous to E.coli gidA] [SP:P25812] [LE:3915] [RE:5801] [DI:direct] >gp:[GI:e1184827:g2636648] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:glucose-inhibited division protein] [GN:gidA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P25812] [LE:209531] [RE:211417] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36359761_f3_604 3174 6946 840 279 581 2.0e−56 Description sp:[LN:YFOL_STRTR] [AC:P96051] [OR:STREPTOCOCCUS THERMOPHILUS] [DE:(ORF1091)] [SP:P96051] [DB:swissprot] >gp:[GI:g1685111] [LN:STU58210] [AC:U58210] [OR:Streptococcus thermophilus] [SR:Streptococcus thermophilus strain=Sfi6] [DB:genpept-bct2] [DE:Streptococcus thermophilus tetrahydrofolate dehydrogenase/cyclohydrolase (folD), penicillin-binding protein 2b(pbp2b) and DNA repair and recombination protein (recM) genes, complete cds.] [NT:orf1091] [LE:1091] [RE:1927] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36522507_f1_163 3175 6947 741 246 740 2.9e−73 Description sp:[LN:GIDB_BACSU] [AC:P25813] [GN:GIDB] [OR:BACILLUS SUBTILIS] [DE:GLUCOSE INHIBITED DIVISION PROTEIN B] [SP:P25813] [DB:swissprot] >pir:[LN:BWBSGB] [AC:I40441:S66024:H69631:JQ1217:S18077] [PN:glucose-inhibited division protein gidB] [GN:gidB] [CL:gidB protein] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:d1005772:g467384] [LN:BAC180K] [AC:D26185] [PN:unknown] [GN:gidB] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:56866] [RE:57585] [DI:complement] >gp:[GI:g40027] [LN:BSORIGS] [AC:X62539] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genes rpmH, rnpA, 50kd, gidA and gidB.] [NT:homologous to E.coli gidB] [SP:P25813] [LE:5815] [RE:6534] [DI:direct] >gp:[GI:e1184826:g2636647] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:glucose-inhibited division protein] [GN:gidB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P25813] [LE:208798] [RE:209517] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_36584652_c1_805 3176 6948 339 112 380 4.0e−35 Description gp:[GI:d1045996:g5360820] [LN:D86934] [AC:D86934] [PN:transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N026; putative] [LE:19527] [RE:19751] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_37892_f1_217 3177 6949 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3906578_f1_8 3178 6950 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3913137_f2_262 3179 6951 570 189 982 6.5e−99 Description gp:[GI:g459909] [LN:L29436] [AC:L29436:M15048:N00048] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [NT:ORF1] [LE:5718] [RE:6266] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3937713_c3_1215 3180 6952 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3938802_f2_326 3181 6953 1383 460 2306 3.2e−239 Description gp:[GI:d1046000:g5360824] [LN:D86934] [AC:D86934] [PN:site-specific recombinase] [GN:ccrA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N034; cassette chromosome recombinase A] [LE:24137] [RE:25486] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_3954450_c3_1101 3182 6954 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4016887_f1_6 3183 6955 174 57 157 2.6e−10 Description sp:[LN:CADA_LISMO] [AC:Q60048] [GN:CADA] [OR:LISTERIA MONOCYTOGENES] [EC:3.6.1.-] [DE:ATPASE)] [SP:Q60048] [DB:swissprot] >gp:[GI:g495646) [LN:LISCADTNP] [AC:L28104] [PN:ATPase] [GN:cadA] [FN:cadmium resistance] [OR:Transposon Tn5422] [SR:Listeria monocytogenes (individual_isolate Lm74) DNA; Transposo] [DB:genpept-una] [DE:Listeria monocytogenes ATPase (cadA) gene; accessory protein (cadC)gene; resolvase (tnpR) gene and transposase (tnpA) gene.] [LE:158] [RE:2293] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4022952_f1_64 3184 6956 1515 504 1186 3.9e−140 Description pir:[LN:C70880] [AC:C70880] [PN:probable hsdM protein] [GN:hsdM] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:(GI:e1173886:g2624278] [LN:MTV002] [AC:AL008967:AL123456] [PN:hsdM] [GN:hsdM] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 122/162.] [NT:Rv2756c, (MTV002.21c), len:540 aa. hsdM, type I] [LE:19902] [RE:21524] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4025302_f3_464 3185 6957 1293 430 1892 2.4e−195 Description sp:[LN:ARSB_STAAU] [AC:P30329] [GN:ARSB] [OR:STAPHYLOCOCCUS AUREUS] [DE:ARSENICAL PUMP MEMBRANE PROTEIN] [SP:P30329] [DB:swissprot] >pir:[LN:C41903] [AC:C41903] [PN:arsenical pump membrane protein] [GN:arsB] [CL:arsenical pump membrane protein] [OR:Staphylococcus aureus] [DB:pir1] >gp:[GI:g150728] [LN:PI2ARSRBC] [AC:M86824] [PN:arsenic efflux pump protein] [GN:arsB] [FN:arsenic efflux pump component (membrane] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 arsenic resistance operon (arsRBC) genes, complete cds.] [LE:587] [RE:1876] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4093937_c3_1172 3186 6958 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4098518_c2_1040 3187 6959 417 318 682 4.0e−67 Description sp:[LN:MERR_STAAU] [AC:P22874] [GN:MERR] [OR:STAPHYLOCOCCUS AUREUS] [DE:MERCURIC RESISTANCE OPERON REGULATORY PROTEIN] [SP:P22874] [DB:swissprot] >pir:[LN:A29504] [AC:A29504] [PN:hypothetical 16K protein (mer operon)] [CL:transcription repressor glnR] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g459903] [LN:L29436] [AC:L29436:M15048:N00048] [OR:Plasmid pI258] [SR:Plasmid pI258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S.aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [NT:ORF2] [LE:1030] [RE:1437] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4120462_f2_235 3188 6960 945 314 791 1.1e−78 Description sp:[LN:ARCL_(—) ECOLI] [AC:Q46807] [GN:YQEA] [OR:ESCHERICHIA COLI] [DE:CARBAMATE KINASE-LIKE PROTEIN 1] [SP:Q46807] [DB:swissprot] >pir:[LN:B65071] [AC:B65071] [PN:hypothetical protein b2874] [CL:carbamate kinase] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g887824] [LN:ECU28375] [AC:U28375] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 genome; approximately 64 to 65 minutes.] [NT:ORF_o310] [LE:21276] [RE:22208] [DI:direct] >gp:[GI:g1789238] [LN:AE000370] [AC:AE000370:U00096] [PN:putative kinase] [GN:yqeA] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 260 of 400 of the complete genome.] [NT:o310; This 310 aa ORF is 45 pct identical (21 gaps)] [LE:11360] [RE:12292] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_41265_c3_1170 3189 6961 1365 454 1593 1.2e−163 Description pir:[LN:A42280] [AC:S65968:A42280:H69683] [PN:adenylosuccinate synthase, purA:IMP--aspartate ligase] [GN:purA] [CL:adenylosuccinate synthase] [OR:Bacillus subtilis] [EC:6.3.4.4] [DB:pir2] >gp:[GI:d1005716:g467328) [LN:BAC180K] [AC:D26185] [PN:adenylosuccinate synthetase] [GN:purA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:3429] [RE:4721] [DI:complement] >gp:[GI:e1184768:g2636589] [LN:BSUB0021] [AC:Z99124:AL009126] [PN:adenylosuccinate synthetase] [GN:purA] [FN:AMP biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.4.4] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P29726] [LE:155361] [RE:156653] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4179680_c2_977 3190 6962 936 311 214 1.7e−16 Description sp:[LN:YYBS_BACSU] [AC:P37485] [GN:YYBS] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 34.5 KD PROTEIN IN RPLI-COTF INTERGENIC REGION] [SP:P37485] [DB:swissprot] >pir:[LN:S65977] [AC:S65977:F70088] [PN:hypothetical protein yybS] [GN:yybS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1005725:g467337] [LN:BAC180K] [AC:D26185] [PN:unknown] [OR:Bacillus subtilis] [SR:Bacillus subtilis (sub_species:Marburg, strain:168) DNA] [DB:genpept-bct1] [DE:B. subtilis DNA, 180 kilobase region of replication origin.] [LE:13655] [RE:14584] [DI:complement] >gp:[GI:e1184778:g2636599] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yybS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [SP:P37485] [LE:165587] [RE:166516] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4196051_f1_29 3191 6963 333 110 424 8.7e−40 Description pir:[LN:A41902] [AC:A41902] [PN:arsenical resistance operon repressor] [GN:arsR] [CL:arsenical resistance operon repressor] [OR:Staphylococcus xylosus] [DB:pir1] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_42162_c3_1124 3192 6964 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4305342_f2_445 3193 6965 1557 518 2015 2.2e−208 Description sp:[LN:GUAA_BACSU] [AC:P29727:O34531] [GN:GUAA] [OR:BACILLUS SUBTILIS] [EC:6.3.5.2] [DE:AMIDOTRANSFERASE] [GMP SYNTHETASE)] [SP:P29727:O34531] [DB:swissprot] >pir:[LN:C69638] [AC:C69638:B42280] [PN:GMP synthase (glutamine-hydrolyzing), guaA] [GN:guaA] [CL:GMP synthase (glutamine-hydrolyzing):trpG homology] [OR:Bacillus subtilis] [EC:6.3.5.2] [DB:pir2] >gp:[GI:g2239288] [LN:BSU51115] [AC:U51115] [PN:GMP synthetase] [GN:guaA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis CotA (cotA), GabP (gabP), YeaB (yeaB), YeaC(yeaC), YebA (yebA), GMP synthetase (guaA) genes, complete cds, and AIR carboxylase I (purE) gene, partial cds.] [LE:9970] [RE:11511] [DI:direct] >gp:[GI:e1182615:g2632949] [LN:BSUB0004] [AC:Z99107:AL009126] [PN:GMP synthetase] [GN:guaA] [FN:GMP biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.3.5.2] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:alternate gene name: guaB] [SP:P29727] [LE:91559] [RE:93100] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4335750_f1_166 3194 6966 600 199 158 2.0e−11 Description pir[LN:I40868] [AC:I40868] [PN:hypothetical protein 3] [OR:Clostridium perfringens] [DB:pir2] >gp:[GI:g853809] [LN:CPNANH] [AC:X87369] [OR:Clostridium perfringens] [DB:genpept-bct1] [DE:C.perfringens nanH gene & ORF1, 2, 3 & 4.] [NT:ORF3] [LE:4957] [RE:5754] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4453165_c1_862 3195 6967 537 178 202 1.8e−15 Description gp:[GI:d1006123:g473790] [LN:ECO82K] [AC:D26562] [PN:'ORF'] [OR:Escherichia coli] [SR:Escherichia coli (sub_strain W3110, strain K-12) (library: Kohara′] [DB:genpept-bct1] [DE:Escherichia coli genome, 2.4–4.1 min region (110, 917–193, 643 bp from 0 min).] [NT:'copper resistance protein copA homology'] [LE:25693] [RE:27117] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_446062_c3_1126 3196 6968 159 52 231 2.5e−19 Description pir:[LN:A60634] [AC:A60634:C30471:S26349] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46597] [LN:SAI52571] [AC:X53952] [PN:transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S.aureus plasmid pSH6 DNA for insertion sequences IS257-1 and IS256.] [LE:188] [RE:862] [DI:direct] >gp:[GI:g3676452] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:40946] [RE:41620] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4475050_f2_341 3197 6969 162 53 68 0.045 Description pir:[LN:F71007] [AC:F71007] [PN:hypothetical protein PH1356] [GN:PH1356] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031405:g3257779] [LN:AP000006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:111aa long hypothetical protein] [GN:PH1356] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001-1485000 nt. position(6/7).] [LE:56557] [RE:56892] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4485937_f1_10 3198 6970 1044 347 1060 3.5e−107 Description sp:[LN:OTCC_HAEIN] [AC:P44770] [GN:ARCB:HI0596] [OR:HAEMOPHILUS INFLUENZAE] [EC:2.1.3.3] [DE:ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC, (OTCASE)] [SP:P44770] [DB:swissprot] >pir:[LN:H64079] [AC:H64079] [PN:ornithine carbamoyltransferase,] [CL:ornithine carbamoyltransferase: aspartate/ornithine carbamoyltransferase homology] [OR:Haemophilus influenzae] [EC:2.1.3.3] [DB:pir2] >gp:[GI:g1573585] [LN:U32741] [AC:U32741:L42023] [PN:ornithine carbamoyltransferase (arcB)] [GN:HI0596] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 56 of 163 of the complete genome.] [NT:similar to GB:X05637 SP:P08308 PID:45288 percent] [LE:3467] [RE:4471] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_448785_f3_518 3199 6971 927 308 408 4.3e−38 Description sp:[LN:SOXR_ARTSP] [AC:Q44311] [GN:SOXR] [OR:ARTHROBACTER SP] [SR:TE1826,] [DE:TRANSCRIPTIONAL REGULATOR SOXR] [SP:Q44311] [DB:swissprot] >gp:[GI:d1026865:g3116220] [LN:AB007122] [AC:AB007122] [PN:negative regulator] [OR:Arthrobacter sp.] [SR:Arthrobacter sp. (strain:TE1826) DNA] [DB:genpept-bct1] [DE:Arthrobacter sp. gene for negative regulator, sarcosine oxidase, transporter, creatinase, creatininase and transporter, complete cds.] [LE:321] [RE:1190] [DI:complement] >gp:[GI:d1010363:g1333651] [LN:ARGTE1826] [AC:D63413] [PN:regulator] [GN:soxR] [OR:Arthrobacter sp.] [SR:Arthrobacter sp. (strain:TE1826) DNA] [DB:genpept-bct1] [DE:Arthrobacter sp. gene for sarcosine oxidase, complete cds.] [LE:1539] [RE:2408] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4694677_c1_832 3200 6972 324 107 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4697337_f3_519 3201 6972 549 182 255 7.1e−22 Description pir:[LN:B69978] [AC:B69978] [PN:2-nitropropane dioxygenase homolog yrpB] [GN:yrpB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1934639] [LN:BSU93875] [AC:U93875] [PN:2-nitropropane dioxygenase] [GN:yrpB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis alcohol dehydrogenase (adhB) gene, partial cds, hypothetical spore coat protein (yraF), hypothetical spore coat protein (yraG), YraH (yraH), YraI (yraI), YraJ (yraJ), YraK (yraK), YraL (yraL), chitosanase precursor (csn), YraM (yraM), LysR-family transcription regulator (yraN), YraO (yraO), YrpG (yrpG), RNA polymerase sigma factor SigZ (sigZ), YrpE (yrpE), YrpD (yrpD), YrpC (yrpC) and 2-nitropropane dioxygenase (yrpB) genes, complete cds, and aminoglycoside 6-adenylyltransferase (aadK) gene, partial cds.] [NT:similar to 2-nitropropane dioxigenase of Williopsis] [LE:16473] [RE:17516] [DI:complement] >gp:[GI:e1183909:g2635125] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrpB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to 2-nitropropane dioxygenase] [LE:136734] [RE:137777] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4714062_c1_759 3202 6974 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4722338_c3_1233 3203 6975 234 77 57 0.047 Description gp:[GI:g1354131] [LN:EHU48386] [AC:U48386] [PN:pEhS4] [GN:EhS4] [OR:Entamoeba histolytica] [DB:genpept-inv2] [DE:Entamoeba histolytica putative serine/threonine protein kinase(EhS4) gene, complete cds.] [NT:putative serine/threonine protein kinase] [LE:243:510] [RE:463:1791] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4725385_f1_213 3204 6976 675 224 366 1.2e−33 Description sp:[LN:YRHP_BACSU] [AC:O05406] [GN:YRHP] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 23.4 KD PROTEIN IN AAPA-SIGV INTERGENIC REGION] [SP:O05406) [DB:swissprot] >pir:[LN:F69975] [AC:F69975] [PN:dihydrodipicolinate reductase homolog yrhP] [GN:yrhP] [CL:hypothetical protein b1798] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183940:g2635156] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrhP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to dihydrodipicolinate reductase] [SP:O05406] [LE:167862] [RE:168494] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4726555_f2_234 3205 6977 474 157 203 2.3e−16 Description gp:[GI:g4980875] [LN:AE001717] [AC:AE001717:AE000512] [PN:arginine repressor] [GN:TM0371] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 29 of 136 of the complete genome.] [NT:similar to GB:M27869 SP:P17893 PID:142450] [LE:2550] [RE:3008] [DI:direct] >gp:[GI:e1489641:g5102818] [LN:TMA132286] [AC:AJ132286] [PN:arginine repressor] [GN:argR] [FN:regulation of arginine biosynthesis genes] [OR:Thermotoga maritima] [DB:genpept] [DE:Thermotoga maritima argR gene, strain MSB8.] [LE:1] [RE:459] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4766933_f3_490 3206 6978 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4770028_c1_740 3207 6979 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_48412_f2_258 3208 6980 159 52 124 1.8e−07 Description pir:[LN:H65154] [AC:H65154:S47779:S01252] [PN:probable transposase, 33.3K:hypothetical protein o283:probable transposase B] [GN:yi5B] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1789981] [LN:AE000433] [AC:AE000433:U00096] [PN:IS150 putative transposase] [GN:t150] [FN:IS, phage, Tn; Transposon-related functions] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 323 of 400 of the complete genome.] [NT:o283; 99 pct identical amino acid sequence and] [LE:1897] [RE:2748] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4866425_f2_315 3209 6981 465 154 305 3.6e−27 Description pir:[LN:B69978] [AC:B69978] [PN:2-nitropropane dioxygenase homolog yrpB] [GN:yrpB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1934639] [LN:BSU93875] [AC:U93875] [PN:2-nitropropane dioxygenase] [GN:yrpB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis alcohol dehydrogenase (adhB) gene, partial cds, hypothetical spore coat protein (yraF), hypothetical spore coat protein (yraG), YraH (yraH), YraI (yraI), YraJ (yraJ), YraK (yraK), YraL (yraL), chitosanase precursor (csn), YraM (yraM), LysR-family transcription regulator (yraN), YraO (yraO), YrpG (yrpG), RNA polymerase sigma factor SigZ (sigZ), YrpE (yrpE), YrpD (yrpD), YrpC (yrpC) and 2-nitropropane dioxygenase (yrpB) genes, complete cds, and aminoglycoside 6-adenylyltransferase (aadK) gene, partial cds.] [NT:similar to 2-nitropropane dioxigenase of Williopsis] [LE:16473] [RE:17516] [DI:complement] >gp:(GI:e1183909:g2635125] [LN:BSUB0014] [AC:Z99117:AL009126] [GN:yrpB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 14 of 21): from 2599451 to 2812870.] [NT:similar to 2-nitropropane dioxygenase] [LE:136734] [RE:137777] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4867343_c3_1210 3210 6982 2739 912 234 6.2e−16 Description pir:[LN:G70178] [AC:G70178] [PN:exodeoxyribonuclease V, alpha chain (recD) homolog] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2688552] [LN:AE001164] [AC:AE001164:AE000783] [PN:exodeoxyribonuclease V, alpha chain (recD)] [GN:BB0632] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 50 of 70) of the complete genome.] [NT:similar to SP:P04993 GB:X04581 GB:X04582 PID:42683] [LE:9371] [RE:11203] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4895250_f3_627 3211 6983 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_492086_f3_540 3212 6984 1824 607 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4957943_f3_655 3213 6985 600 199 205 7.3e−16 Description sp:[LN:F26_CAEEL] [AC:Q21122] [GN:K02B2.1] [OR:CAENORHABDITIS ELEGANS] [EC:2.7.1.105:3.1.3.46] [DE:BISPHOSPHATASE,] [SP:Q21122] [DB:swissprot] >gp:[GI:g1118103] [LN:CELKO2B2] [AC:U41558] [GN:K02B2.1] [OR:Caenorhabditis elegans] [DB:genpept-inv2] [DE:Caenorhabditis elegans cosmid K02B2.] [NT:Contains similarity to Pfam domain:PF00300 (PGAM),] [LE:5652:5766:6320:6579] [RE:5700:5991:6527:6830] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_4971051_c2_1028 3214 6986 825 274 196 1.3e−15 Description gp:[GI:g1405404] [LN:LLU60336] [AC:U60336] [PN:AbiGi] [GN:abiGi] [FN:with AbiGii, causes abortive infection of phage] [OR:Lactococcus lactis subsp. cremoris] [DB:genpept-bct1] [DE:Lactococcus lactis cremoris abortive infection proteins (abiGi and abiGii) genes, complete cds.] [LE:4376] [RE:5125] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_5133462_f3_538 3215 6987 1530 509 146 1.2e−06 Description pir:[LN:G71620] [AC:G71620] [PN:hypothetical protein PFB0195c] [GN:PFB0195c] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845121] [LN:AE001380] [AC:AE001380:AE001362] [PN:hypothetical protein] [GN:PFB0195c] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 17 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:1011] [RE:3101] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_5190938_c3_1167 3216 6988 471 156 77 0.031 Description sp:[LN:YH37_HAEIN] [AC:P44301] [GN:HI1737] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI1737] [SP:P44301] [DB:swissprot] >pir:[LN:E64041] [AC:E64041] [PN:branched-chain amino acid transport protein azlD homolog HI1737] [CL:branched-chain amino acid transport protein azlD] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1574595] [LN:U32846] [AC:U32846:L42023] [PN:conserved hypothetical protein] [GN:HI17371 [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 161 of 163 of the complete genome.] [NT:similar to GB:AL009126 percent identity: 53.70;] [LE:9500] [RE:9829] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_5275393_f1_18 3217 6989 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_5292300_c2_1002 3218 6990 342 113 83 0.029 Description pir:[LN:A71655] [AC:A71655] [PN:hypothetical protein RP5111] [GN:RP511] [OR:Rickettsia prowazekii] [DB:pir2] >gp:[GI:e1342807:g3861063] [LN:RPXX03] [AC:AJ235272:AJ235269] [PN:unknown] [GN:RP511] [OR:Rickettsia prowazekii] [DB:genpept-bct1] [DE:Rickettsia prowazekii strain Madrid E, complete genome; segment3/4.] [LE:35291] [RE:38143] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_5313316_c2_936 3219 6991 1413 470 245 8.3e−38 Description pir:[LN:S74046] [AC:S74046] [PN:probable sugar transport protein c0110] [OR:Sulfolobus solfataricus] [DB:pir2] >gp:[GI:e283949:g1707740] [LN:SS100KBFR] [AC:Y08256] [PN:sugar transporter] [GN:orf c01010] [OR:Sulfolobus solfataricus] [DB:genpept-bct1] [DE:S. solfataricus 100 kbp DNA fragment.] [LE:71310] [RE:72581] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_5367337_c3_1274 3220 6992 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_57217_c1_735 3221 6993 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_582777_c2_892 3222 6994 1476 491 1405 9.7e−144 Description sp:[LN:YHCL_BACSU] [AC:P54596] [GN:YHCL] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 49.0 KD PROTEIN IN CSPB-GLPP INTERGENIC REGION] [SP:P54596] [DB:swissprot] >pir:[LN:H69822] [AC:H69822] [PN:sodium-glutamate symporter homolog yhcL] [GN:yhcL] [CL:Bacillus subtilis sodium-glutamate symporter homolog yhcL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e233874:g1239988] [LN:BS75DGREG] [AC:X96983] [PN:hypothetical protein] [GN:yhcL] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 75 degrees: cspB upstream of glpPFKD operon).] [NT:similarity to the proton/sodium-glutamate symport] [SP:P54596] [LE:7868] [RE:9259] [DI:direct] >gp:(GI:e1182902:g2633236] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to sodium-glutamate symporter] [SP:P54596] [LE:183674] [RE:185065] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_595937_f2_394 3223 6995 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6016063_f3_662 3224 6996 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6054512_f3_600 3225 6997 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6095000_f2_425 3226 6998 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_649141_f2_330 3227 6999 567 188 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6521882_f1_32 3228 7000 195 64 81 0.0019 Description gp:[GI:g5306165] [LN:AF160864] [AC:AF160864] [PN:orf98] [GN:orf98] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:Open reading frame ymf71 (CPGN); ATT initiation] [LE:37598] [RE:37894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6643751_c1_859 3229 7001 270 89 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6644537_f1_178 3230 7002 258 85 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6650267_f3_611 3231 7003 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6715_c3_1123 3232 7004 510 169 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6728178_f1_176 3233 7005 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6728578_c2_942 3234 7006 1893 630 678 1.1e−66 Description pir:[LN:B70001] [AC:B70001] [PN:ABC transporter (permease) homolog ytsD] [GN:ytsD] [OR:Bacillus subtilis] [DB:pir2] >gp:(GI:e1185910:g2635521] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to ABC transporter (permease)] [LE:110708] [RE:112648] [DI:complement] >gp:(GI:g2293178] [LN:AF008220] [AC:AF008220] [PN:YtsD] [GN:ytsD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to NADH dehydrogenase] [LE:67779] [RE:69719] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6819462_f1_9 3235 7007 1491 496 1508 1.2e−154 Description gp:[GI:e1299584:g3687418] [LN:BLY17554] [AC:Y17554] [PN:permease] [GN:arcD] [OR:Bacillus licheniformis] [DB:genpept-bct1] [DE:Bacillus licheniformis arcA, arcB, arcC and arcD genes.] [LE:2579] [RE:3985] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6828125_c1_788 3236 7008 252 83 398 5.0e−37 Description gp:[GI:d1046032:g5360856] [LN:D86934] [AC:D86934] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF CN040] [LE:47301] [RE:>47552] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6834501_c1_828 3237 7009 231 76 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6929627_c2_1064 3238 7010 1146 381 756 5.7e−75 Description pir:[LN:F70903] [AC:F70903] [PN:probable adhE protein] [GN:adhE] [CL:long-chain alcohol dehydrogenase homology] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e322878:g2213499] [LN:MTCI28] [AC:Z97050:AL123456] [PN:adhE] [GN:adhE] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 10/162.] [NT:Rv0162c, (MTCI28.02c), len:383, adhE, alcohol] [LE:1482] [RE:2633] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6929642_f1_14 3239 7011 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6929686_c1_1081 3240 7012 264 87 368 7.5e−34 Description pir:[LN:A60634] [AC:A60634:C30471:S26349] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46597] [LN:SAIS52571] [AC:X53952] [PN:transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pSH6 DNA for insertion sequences IS257-1 and IS256.] [LE:188] [RE:862] [DI:direct] >gp:[GI:g3676452] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:40946] [RE:41620] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_6929686_f1_111 3241 7013 693 230 1195 1.7e−121 Description sp:[LN:TRA2_STAAU] [AC:P19380] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE-LIKE ELEMENT IS431MEC] [SP:P19380] [DB:swissprot] >pir:[LN:S12093] [AC:S12093:JU0116] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46602] [LN:SAIS431M] [AC:X53818:M18438] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus IS431mec gene associated with methicillin resistance.] [NT:putative transposase (AA1–224)] [SP:P19380] [LE:272] [RE:946] [DI:direct] >gp:[GI:e1237900:g2791991] [LN:SAMECAR1I] [AC:Y14051] [PN:putative transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus mecA, mecR1, mecI genes and ORF168, ORF142, ORF44, ORF145 and ORF224.] [NT:ORF224] [LE:8096] [RE:8770] [DI:direct] >gp:[GI:d1046034:g5360858] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N062] [LE:48054] [RE:48728] [DI:direct] >gp:[GI:d1046044:g5360868] [LN:D86934] [AC:D86934] [PN:transposase for insertion sequence-like element] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:N315) DNA, clone_lib:library of N31] [DB:genpept] [DE:Staphylococcus aureus genes, mec region, partial and complete cds.] [NT:ORF N070] [LE:53400] [RE:54074] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_7031563_c1_763 3242 7014 243 80 358 8.6e−33 Description pir:[LN:S54709] [AC:S54709] [PN:hypothetical protein 81] [OR:Staphylococcus aureus] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_7223587_c3_1174 3243 7015 1401 466 218 4.9e−15 Description gp:[GI:d1011960:g1064812] [LN:BACGNTZA] [AC:D78193] [GN:yycH] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis 36kb sequence between gntZ and trnY genes encoding 34 ORFs.] [LE:32039] [RE:33415] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_7297338_f1_190 3244 7016 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_791307_c3_1273 3245 7017 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_862927_c3_1289 3246 7018 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_87562_f3_550 3247 7019 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_892142_f2_249 3248 7020 198 65 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_898550_f3_629 3249 7021 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_917550_c1_869 3250 7022 216 71 143 5.2e−10 Description gp:[GI:g929968] [LN:BAU30713] [AC:U30713] [OR:Bacillus anthracis] [SR:plasmid pXO1] [DB:genpept-bct1] [DE:Bacillus anthracis Sterne toxin plasmid pXO1 right inverted repeat element (SterneR) bordering the toxin-encoding region, ORFA and truncated ORFB genes, complete cds.] [NT:ORFA; similar to B. anthracis WeyAR element ORFA;] [LE:171] [RE:491] [DI:direct] >gp:[GI:g929971] [LN:BAU30714] [AC:U30714] [OR:Bacillus anthracis] [SR:plasmid pXO1] [DB:genpept-bct1] [DE:Bacillus anthracis Weybridge A toxin plasmid pXO1 right inverted repeat element (WeyAR) bordering the toxin-encoding region, ORFA and ORFB genes, complete cds.] [NT:ORFA; similar to B. anthracis SterneR element ORFA;] [LE:171] [RE:491] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_969050_c2_1031 3251 7023 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_970077_c3_1098 3252 7024 135 44 52 0.040 Description gp:[GI:e264333:g1050454] [LN:CHRFBFPGE] [AC:X91081] [GN:rfbP] [OR:Campylobacter hyoilei] [DB:genpept-bct1] [DE:C.hyoilei rfbF and rfbP genes.] [LE:1896] [RE:2498] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_970250_c2_1057 3253 7025 912 303 446 4.1e−42 Description pir:[LN:E69219] [AC:E69219] [PN:conserved hypothetical protein MTH894] [GN:MTH894] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2621989] [LN:AE000865] [AC:AE000865:AE000666] [PN:conserved protein] [GN:MTH894] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct1] [DE:Methanobacterium thermoautotrophicum from bases 808939 to 820180 (section 71 of 148) of the complete genome.] [NT:Function Code:14.01 - Unknown, Conserved protein;] [LE:4427] [RE:5410] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_970386_f1_60 3254 7026 333 110 270 5.2e−23 Description pir:[LN:D70073] [AC:D70073] [PN:metabolite transport protein homolog yxcC] [GN:yxcC] [CL:glucose transport protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184706:g2636527] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxcC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21): from 3999281 to 4214814.] [NT:similar to metabolite transport protein] [LE:87516] [RE:88901] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_9765951_c1_816 3255 7027 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_9773385_c1_687 3256 7028 816 271 303 5.8e−27 Description gp:[GI:g757830] [LN:EC4HPADNA] [AC:Z37980] [PN:2-oxo-hept-3-ene-1,7-dioate hydratase] [GN:hpaH] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E.coli hpa[G, R, E, D, F, H, I, X, A, B, C] genes.] [LE:4957] [RE:5760] [DI:direct] >gp:[GI:g2695682] [LN:AF036583] [AC:AF036583] [PN:2-oxo-hept-4-ene-1,7-dioate hydratase] [GN:hpcG] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli 2-oxo-hept-4-ene-1,7-dioate hydratase (hpcG) gene, complete cds.] [NT:OHED hydratase] [LE:1] [RE:804] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_979178_c3_1277 3257 7029 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_9792842_c1_711 3258 7030 1851 616 1480 1.1e−151 Description pir:[LN:C69840] [AC:C69840] [PN:conserved hypothetical protein yitJ] [GN:yitJ] [OR:Bacillus subtilis] [DB:pir2] >gp:(GI:e1183103:g2633437] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yitJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21): from 999501 to 1209940.] [NT:similar to hypothetical proteins] [LE:178731] [RE:180569] [DI:complement] >gp:[GI:e1173535:g2145402] [LN:BSY09476] [AC:Y09476] [PN:YitJ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis 54kb genomic DNA fragment.] [NT:putative - Some homology with MetH2 (S. cerevisae)] [LE:35957] [RE:37795] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_980000_c3_1090 3259 7031 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_9806332_f3_491 3260 7032 450 149 237 9.3e−20 Description pir:[LN:A71175] [AC:A71175] [PN:probable dehydrogenase] [GN:PH0597] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030629:g3257003] [LN:AP000002] [AC:AP000002:AB009475:AB009476:AB009477:AB009478:AB009479:AB009480] [PN:376aa long hypothetical dehydrogenase] [GN:PH0597] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 287001–544000 nt. position(2/7).] [NT:similar to owl:BSZ9404317 percent identity: 49.821] [LE:248539] [RE:249669] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_9806692_c3_1251 3261 7033 1374 457 907 5.7e−91 Description sp:[LN:YMER_STAAU] [AC:P08655] [OR:STAPHYLOCOCCUS AUREUS] [DE:HYPOTHETICAL 19.7 KD PROTEIN IN MERCURIC RESISTANCE OPERON] [SP:P08655] [DB:swissprot] >pir:[LN:G29504] [AC:G29504] [PN:hypothetical 20K protein (mer regulatory region)] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g459902] [LN:L29436] [AC:L29436:M15048:N00048] [PN:regulatory protein] [GN:merR] [OR:Plasmid pI258] [SR:Plasmid p1258 DNA] [DB:genpept-bct1] [DE:Plasmid pI258 (from S. aureus strain RN23 8325) mercury resistance(mer) operon encoding mercuric reductase (merA), organomercuriallyase (merB), regulatory protein (merR) and membrane transport protein (merT), complete cds.] [LE:188] [RE:730] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_9847811_c1_698 3262 7034 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503000999_991500_f1_182 3263 7035 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_11955055_c1_45 3264 7036 192 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_1214635_c2_48 3265 7037 387 128 469 1.5e−44 Description gp:[GI:d1036080:g4001724] [LN:AB015981] [AC:AB015981] [PN:OrfA] [GN:orfA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:302] [RE:685] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_13089052_c2_46 3266 7038 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_1378550_f3_34 3267 7039 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_14460932_f2_21 3268 7040 294 97 451 1.2e−42 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_14500036_c3_66 3269 7041 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_15041078_f2_13 3270 7042 279 92 319 1.2e−28 Description pir:[LN:G70012] [AC:G70012] [PN:conserved hypothetical protein yuiF] [GN:yuiF] [CL:conserved integral membrane protein HP0758] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184283:g2635701] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yuiF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:96999] [RE:98327] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_21646015_f3_36 3271 7043 201 66 198 7.8e−16 Description gp:[GI:g1022725] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF2] [LE:394] [RE:1083] [DI:complement] >gp:[GI:g295162] [LN:STAMECRA] [AC:L14017] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain COL) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus methicillin-resistance protein (mecR) gene and unknown ORF, complete cds.] [NT:unknown ORF1; putative] [LE:1492] [RE:2181] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_22136087_c2_53 3272 7044 1512 503 2102 1.3e−217 Description gp:[GI:d1036084:g4001728] [LN:AB015981] [AC:AB015981] [PN:MnhD] [GN:mnhD] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:3976] [RE:5472] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_22457312_f1_9 3273 7045 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_23456932_f3_26 3274 7046 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_23859843_f1_10 3275 7047 393 130 212 2.5e−17 Description sp:[LN:GS13_BACSU] [AC:P80870:O05238] [GN:YUGI] [OR:BACILLUS SUBTILIS] [DE:GENERAL STRESS PROTEIN 13 (GSP13)] [SP:P80870:O05238] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_23947132_f3_23 3276 7048 378 125 269 2.3e−23 Description gp:[GI:e291128:g1834379] [LN:BLCOMAB] [AC:Y10551] [GN:ComAB] [FN:positive activator of lichenysin synthetase] [OR:Bacillus licheniformis] [DB:genpept-bct1] [DE:B. licheniformis comAB gene.] [LE:617] [RE:>963] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_24644702_c1_41 3277 7049 435 144 647 2.0e−63 Description gp:[GI:d1036082:g4001726] [LN:AB015981] [AC:AB015981] [PN:MnhB] [GN:mnhB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:3214] [RE:3642] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_26756252_c3_61 3278 7050 2427 808 3318 0.0 Description gp:[GI:d1036081:g4001725] [LN:AB015981] [AC:AB015981] [PN:MnhA] [GN:mnhA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:816] [RE:3221] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_29742890_f2_22 3279 7051 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_32689812_c2_54 3280 7052 312 103 386 9.3e−36 Description gp:[GI:d1036086:g4001730] [LN:AB015981] [AC:AB015981] [PN:MnhF] [GN:mnhF] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:5953] [RE:6246] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_33397338_c3_64 3281 7053 492 163 635 3.8e−62 Description gp:[GI:d1036085:g4001729] [LN:AB015981] [AC:AB015981] [PN:MnhE] [GN:mnhE] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:5474] [RE:5953] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_34384380_c1_42 3282 7054 333 110 468 1.9e−44 Description gp:[GI:d1036083:g4001727] [LN:AB015981] [AC:AB015981] [PN:MnhC] [GN:mnhC] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:3642] [RE:3983] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_34617286_f2_19 3283 7055 612 203 304 3.9e−35 Description sp:[LN:YDJ3_SCHPO] [AC:P87051] [GN:SPAC57A10.03] [OR:SCHIZOSACCHAROMYCES POMBE] [SR:,FISSION YEAST] [EC:5.2.1.8] [DE:PROBABLE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C57A10.03,] [SP:P87051] [DB:swissprot] >gp:[GI:e313994:g2058370] [LN:SPAC57A10] [AC:Z94864] [PN:peptidyl-prolyl cis-trans isomerase] [GN:SPAC57A10.03] [OR:Schizosaccharomyces pombe] [SR:fission yeast] [DB:genpept-pln1] [DE:S. pombe chromosome I cosmid c57A10.] [NT:SPAC57A10.03, len:155, SIMILARITY:Caenorhabditis] [SP:P87051] [LE:5344:5414:5521:5779] [RE:5373:5455:5574:5858] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_36604587_c1_44 3284 7056 1173 390 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_4017050_c3_59 3285 7057 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_5114680_c3_65 3286 7058 363 120 463 6.4e−44 Description gp:[GI:d1036087:g4001731] [LN:AB015981] [AC:AB015981] [PN:MnhG] [GN:mnhG] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:6224] [RE:6580] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_6672886_f3_35 3287 7059 1173 390 914 1.0e−91 Description sp:[LN:YQIG_BACSU] [AC:P54524] [GN:YQIG] [OR:BACILLUS SUBTILIS] [EC:1.-.-.-] [DE:PROBABLE NADH-DEPENDENT FLAVIN OXIDOREDUCTASE YQIG,] [SP:P54524] [DB:swissprot] >pir:[LN:C69961] [AC:C69961] [PN:NADH-dependent flavin oxidoreductase homolog yqiG] [GN:yqiG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013261:g1303926] [LN:BACJH642] [AC:D84432:D82370] [PN:YqiG] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:202096] [RE:203214] [DI:complement] >gp:[GI:e1185689:g2634855] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqiG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:similar to NADH-dependent flavin oxidoreductase] [SP:P54524] [LE:120407] [RE:121525] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001000_783125_c3_56 3288 7060 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10000312_c3_1340 3289 7061 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10006340_f2_492 3290 7062 501 166 85 0.0011 Description gp:[GI:g160616] [LN:PFAR45B] [AC:M83791] [PN:trophozoite antigen] [GN:R45] [OR:Plasmodium falciparum] [SR:Plasmodium falciparum (strain Tak 9.96) (library:lambda-gt11] [DB:genpept-inv1] [DE:Plasmodium falciparum trophozoite antigen gene (repeat region), partial cds.] [LE:<1] [RE:>327] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10265677_f2_556 3291 7063 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10267016_c2_1133 3292 7064 789 262 210 4.1e−17 Description sp:[LN:TIPA_STRLI] [AC:P32184] [GN:TIPA] [OR:STREPTOMYCES LIVIDANS] [DE:TRANSCRIPTIONAL ACTIVATOR TIPA] [SP:P32184] [DB:swissprot] >pir:[LN:S35354] [AC:S35354:A45923] [PN:tipA protein] [GN:tipA] [CL:tipA protein] [OR:Streptomyces lividans] [DB:pir2] >gp:[GI:g408223] [LN:S64314] [AC:S64314] [PN:TipAL–AS] [GN:tipA] [OR:Streptomyces lividans] [DB:genpept-bct1] [DE:tipAL–AS complex:tipA=TipAL–AS [Streptomyces lividans, Genomic, 1146 nt].] [NT:thiostrepton-specific recognition protein; Method:] [LE:120] [RE:881] [DI:direct] >gp:[GI:e1453008:g4808352] [LN:SCE9] [AC:AL049841] [PN:transcriptional regulator] [GN:SCE9.20] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid E9.] [NT:SCE9.20c, tipA, transcriptional regulator, len:253] [LE:21108] [RE:21869] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10268818_f3_803 3293 7065 234 77 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10343756_f3_840 3294 7066 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10439005_f1_44 3295 7067 516 171 157 1.7e−11 Description gp:[GI:d1044366:g5105267] [LN:AP000062] [AC:AP000062] [PN:114aa long hypothetical protein] [GN:APE1580] [OR:Aeropyrum pernix] [SR:Aeropyrum pernix (strain:K1) DNA] [DB:genpept] [DE:Aeropyrum pernix genomic DNA, section 5/7.] [NT:similar to OWL:AB00946832 percent identity:37.500] [LE:13911] [RE:14255] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI75030010001_10548187_f3_766 3296 7068 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10581693_f2_490 3297 7069 684 227 842 4.4e−84 Description pir:[LN:A69868] [AC:A69868] [PN:ykvJ protein] [GN:ykvJ] [CL:conserved hypothetical protein HI1191] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184962:g2633743] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:44124] [RE:44783] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10589818_f2_358 3298 7070 201 66 58 0.0051 Description gp:[GI:e321942:g2664263] [LN:EFAS48C] [AC:Y12234] [PN:hypothetical protein] [OR:Enterococcus faecalis] [DB:genpept-bct1] [DE:E. faecalis plasmid DNA containing gene cluster involved in production and immunity to peptide antibiotic AS-48.] [NT:ORF6] [LE:4556] [RE:5065] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10667002_c3_1423 3299 7071 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10667002_c3_1504 3300 7072 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10737818_f1_230 3301 7073 471 156 233 1.7e−18 Description sp:[LN:YP17_LISMO] [AC:P52309] [OR:LISTERIA MONOCYTOGENES] [DE:HYPOTHETICAL 17.1 KD PROTEIN IN DNAG/DNAE 5′REGION (P17)] [SP:P52309] [DB:swissprot] >gp:[GI:g664754] [LN:LMU13165] [AC:U13165] [PN:P17] [OR:Listeria monocytogenes] [DB:genpept-bct2] [DE:Listeria monocytogenes P17 (orfP17), DNA primase (dnaG) and sigma43 subunit of RNA polymerase (rpoD) genes, complete cds.] [NT:orfP17] [LE:196] [RE:645] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_10976387_c3_1503 3302 7074 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_11023402_f3_781 3303 7075 273 90 127 2.6e−08 Description pir:[LN:A71007] [AC:A71007] [PN:hypothetical protein PH1351] [GN:PH1351] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031400:g3257774] [LN:AP000006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:101aa long hypothetical protein] [GN:PH1351] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001–1485000 nt. position(6/7).] [LE:50986] [RE:51291] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_110275_f2_577 3304 7076 276 91 292 8.5e−26 Description gp:[GI:e255528:g1617429] [LN:SEABCTS] [AC:X99127] [PN:membrane protein] [FN:iron repressible ABC transport system] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis gene encoding ABC transport system.] [LE:878] [RE:1624] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_11152176_c1_967 3305 7077 1029 342 1111 1.4e−112 Description pir:[LN:A69855] [AC:A69855] [PN:low-affinity inorganic phosphate transport homolog ykaB] [GN:ykaB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181485:g2632005] [LN:BSAJ2571] [AC:AJ002571] [PN:YkaB] [GN:ykaB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [NT:homologous to low affinity phosphate transporter] [LE:1614] [RE:2600] [DI:complement] >gp:[GI:e1183304:g2633638] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykaB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:similar to low-affinity inorganic phosphate] [LE:154563] [RE:155549] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_112561_f1_99 3306 7078 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_116383_f2_590 3307 7079 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_11728376_c2_1327 3308 7080 249 82 241 2.2e−20 Description pir:[LN:A70026] [AC:A70026] [PN:hypothetical protein yuzB] [GN:yuzB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184298:g2635716] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yuzB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:110425] [RE:110661] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_11831433_f2_602 3309 7081 159 52 48 0.031 Description gp:[GI:g554799] [LN:HIVB54CH] [AC:M96497] [PN:envelope protein] [GN:env] [OR:Human immunodeficiency virus type 1] [SR:Human immunodeficiency virus type 1 (individual_isolate) RNA] [DB:genpept-vr1] [DE:Human immunodeficiency virus type 1 (clone B5-4) V1 & V2 regions of the envelope protein (env) gene, partial cds.] [NT:hypervariable regions V1 and V2; putative] [LE:<1] [RE:>296] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_11883557_f1_292 3310 7082 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1199063_f1_135 3311 7083 510 169 165 5.3e−12 Description sp:[LN:YJJP_HAEIN] [AC:P44520] [GN:HI0108] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI0108] [SP:P44520] [DB:swissprot] >pir:[LN:I64142] [AC:I64142] [PN:hypothetical protein HI0108] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1573061] [LN:U32696] [AC:U32696:L42023] [PN:conserved hypothetical protein] [GN:HI0108] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 11 of 163 of the complete genome.] [NT:similar to GB:U14003 SP:P39402 PID:537207 GB:U00096] [LE:4095] [RE:4988] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1214688_f1_146 3312 7084 939 312 526 1.4e−50 Description sp:[LN:MURB_BACSU] [AC:P18579:P16669:P37581] [GN:MURB] [OR:BACILLUS SUBTILIS] [EC:1.1.1.158] [DE:ACETYLMURAMATE DEHYDROGENASE)] [SP:P18579:P16669:P37581] [DB:swissprot] >pir:[LN:A43727] [AC:S26500:PC1128:A43727:B69662] [PN:UDP-N-acetylenolpyruvoylglucosamine reductase murB:hypothetical protein (murG 3′ region)] [GN:murB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g142833] [LN:BACDDSA] [AC:M31827] [OR:Bacillus subtilis] [SR:Bacillus subtilis (clone:lambda-BS1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis (clone lambda-BS1) cell division and sporulation protein (dds) gene, complete cds.] [NT:ORF2] [LE:479] [RE:1390] [DI:direct] >gp:(GI:e1185113:g2633894] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:UDP-N-acetylenolpyruvoylglucosamine reductase] [GN:murB] [FN:peptidoglycan biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:1.1.1.158] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [NT:alternate gene name: ylxC] [SP:P18579] [LE:197268] [RE:198179] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_12616018_f2_357 3313 7085 270 89 84 0.0027 Description gp:[GI:g48992] [LN:ECINCI2] [AC:X62169:S47694] [GN:pilU] [OR:Escherichia coli] [DB:genpept-bct1] [DE:E.coli IncI2 plasmid R721 pilU, plV, shf, rci genes.] [LE:29] [RE:664] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_12617827_c1_1083 3314 7086 762 253 1160 8.9e−118 Description gp:[GI:e1393156:g4490615] [LN:SAU133520] [AC:AJ133520] [PN:triosephosphate isomerase] [GN:tpi] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus gap operon (gapR, gap, pgk and tpi genes).] [LE:4307] [RE:5068] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_12789077_c3_1469 3315 7087 1107 368 1311 8.9e−134 Description sp:[LN:UVRA_BACSU] [AC:O34863] [GN:UVRA] [OR:BACILLUS SUBTILIS] [DE:EXCINUCLEASE ABC SUBUNIT A] [SP:O34863] [DB:swissprot] >pir:[LN:F69729] [AC:F69729] [PN:excinuclease ABC chain A:excision endonuclease ABC,, chain A:uvrA protein] [GN:uvrA] [CL:excinuclease ABC chain A:ATP-binding cassette homology] [OR:Bacillus subtilis] [EC:3.1.-.-] [DB:pir2] >gp:[GI:e1184422:g2636042] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:excinuclease ABC (subunit A)] [GN:uvrA] [FN:excision of ultraviolet light-induced] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:O34863] [LE:12034] [RE:14907] [DI:complement] >gp:[GI:g2618842] [LN:AF017113] [AC:AF017113] [PN:excinuclease ABC subunit A] [GN:uvrA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:15386] [RE:18259] [DI:direct] >gp:[GI:e1184422:g2636042] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:excinuclease ABC (subunit A)] [GN:uvrA] [FN:excision of ultraviolet light-induced] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:O34863] [LE:12034] [RE:14907] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_12929631_f2_529 3316 7088 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_12948336_c3_1475 3317 7089 273 90 316 2.4e−28 Description sp:[LN:CLPP_BACSU] [AC:P80244:O08433] [GN:CLPP] [OR:BACILLUS SUBTILIS] [EC:3.4.21.92] [DE:(ENDOPEPTIDASE CLP) (CASEINOLYTIC PROTEASE) (PROTEASE TI)] [SP:P80244:O08433] [DB:swissprot] >pir:[LN:B69601] [AC:B69601:A47683] [PN:ATP-dependent clp proteinase, chain P:stress protein G7] [GN:clpP] [CL:ATP-dependent Clp proteinase chain P] [OR:Bacillus subtilis] [EC:3.4.21.-] [DB:pir2] >gp:[GI:e1186142:g2635967] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:ATP-dependent Clp protease proteolytic subunit] [GN:clpP] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.4.21.92] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:alternate gene name:yvdN] [SP:P80244] [LE:145744] [RE:146337] [DI:direct] >gp:[GI:e313044:g1945673] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvdN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:similar to CLPP_(—) ECOLI ATP-dependent clp protease] [SP:P80244] [LE:35334] [RE:35927] [DI:complement] >gp:[GI:g2668494] [LN:BSU59754] [AC:U59754] [PN:ClpP] [GN:clpP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis Clp protease proteolytic component (clpP) gene, complete cds.] [NT:proteolytic component of Clp protease] [LE:140] [RE:733] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1351533_c2_1261 3318 7090 2571 856 3966 0.0 Description sp:[LN:SECA_STAAU] [AC:O06446] [GN:SECA] [OR:STAPHYLOCOCCUS AUREUS] [DE:PREPROTEIN TRANSLOCASE SECA SUBUNIT] [SP:O06446] [DB:swissprot] >gp:[GI:g2078390] [LN:SAU97062] [AC:U97062] [PN:SecA] [GN:secA] [FN:secretion] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus NCTC 8325 SecA (secA) gene, complete cds.] [LE:440] [RE:2971] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1362705_c1_960 3319 7091 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1366018_f3_723 3320 7092 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13710887_c2_1298 3321 7093 753 250 315 3.1e−28 Description pir[LN:I39522] [AC:I39522] [PN:3-dehydroquinate dehydratase,, catabolic] [GN:quiB] [CL:3-dehydroquinate dehydratase:3-dehydroquinate dehydratase homology] [OR:Acinetobacter calcoaceticus] [EC:4.2.1.10] [DB:pir2] >gp:(GI:g3172120] [LN:ACCPCAOP] [AC:L05770:U04359:M33798:U20284:U11554:L13114:L03407] [PN:catabolic dehydroquinate dehydratase] [GN:quiB] [FN:dehydration of dehydroquinate to] [OR:Acinetobacter sp. ADP1] [DB:genpept-bct2] [DE:Acinetobacter sp. ADP1 pca-qui-pob supraoperonic cluster, complete sequence.] [LE:10923] [RE:11795] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13714193_c3_1456 3322 7094 582 193 583 1.2e−56 Description sp:[LN:YSEA_STACA] [AC:P47995] [OR:STAPHYLOCOCCUS CARNOSUS] [DE:HYPOTHETICAL PROTEIN IN SECA 5′REGION (ORF1) (FRAGMENT)] [SP:P47995] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13727318_f1_246 3323 7095 813 270 348 9.9e−32 Description gp:[GI:g2735506] [LN:SCU96107] [AC:U96107] [PN:SceB precursor] [GN:sceB] [OR:Staphylococcus carnosus] [DB:genpept-bct2] [DE:Staphylococcus carnosus N5,N10-methylenetetrahydromethanopterinreductase homolog, SceB precursor (sceB) and putative transmembrane protein genes, complete cds, and putative Na+/H+ antiporter NhaC(nhaC) gene, partial cds.] [NT:major secreted protein] [LE:1894] [RE:2685] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1376577_f2_374 3324 7096 675 224 77 0.0044 Description pir:[LN:F70141] [AC:F70141] [PN:probable oligopeptide transport ATP-binding protein oppF] [GN:oppF] [CL:inner membrane protein malK:ATP-binding cassette homology] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2688242] [LN:AE001140] [AC:AE001140:AE000783] [PN:oligopeptide ABC transporter, ATP-binding] [GN:BB0335] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi (section 26 of 70) of the complete genome.] [NT:similar to SP:P24137 percent identity: 56.81;] [LE:3216] [RE:4187] [DI:direct] >gp:[GI:g2281463] [LN:AF000366] [AC:AF000366] [PN:oligopeptide permease homolog F] [GN:oppF] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi oligopeptide permease homologs AI (oppAI), AII(oppAII), AIII (oppAIII), B (oppB), C (oppC), D (oppD), and F(oppF), P26 (p26) and enolase homolog (eno) genes, complete cds.] [NT:OppF] [LE:9017] [RE:9988] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13803167_f2_373 3325 7097 552 183 157 8.0e−11 Description pir:[LN:A69774] [AC:A69774] [PN:integrase homolog ydcL] [GN:ydcL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020071:g1881291] [LN:AB001488] [AC:AB001488] [GN:ydcL] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE INTEGRASE.] [LE:62741] [RE:63847] [DI:complement] >gp:[GI:e1182446:g2632780] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydcL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:similar to integrase] [LE:126486] [RE:127592] [DI :complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13834425_c2_1291 3326 7098 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13921942_c3_1483 3327 7099 1554 517 1690 6.1e−174 Description pir:[LN:D69675] [AC:D69675:I40024] [PN:phosphoglycerate mutase,, 2, 3-diphosphoglycerate-independent] [GN:pgm] [CL:phosphoglycerate mutase, 2, 3-bisphosphoglycerate-independent] [OR:Bacillus subtilis] [EC:5.4.2.1] [DB:pir2] >gp:[GI:e1186079:g2635904] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:phosphoglycerate mutase] [GN:pgm] [FN:glycolysis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:5.4.2.1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [SP:P39773] [LE:77390] [RE:78925] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_13931527_c3_1337 3328 7100 723 240 87 0.011 Description pir:[LN:S49604] [AC:S49604] [PN:hypothetical protein 126 (rps12 3′ region)] [OR:plastid Astasia longa] [DB:pir2] >gp:[GI:e156256:g1334340] [LN:ALRPS12] [AC:X82630] [GN:orf126] [OR:Chloroplast Astasia longa] [SR:euglenophycean alga] [DB:genpept-pln1] [DE:A. longa plastid rps12, orf126 and orf288 genes.] [NT:ata start] [LE:<1424] [RE:1801] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1408438_f1_283 3329 7101 948 315 110 8.1e−06 Description sp:[LN:YDCZ_ECOLI] [AC:P76111] [GN:YDCZ] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 15.9 KD PROTEIN IN TEHB-ANSP INTERGENIC REGION] [SP:P76111] [DB:swissprot] >pir:[LN:B64897] [AC:B64897] [PN:probable membrane protein b1447] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1787718] [LN:AE000241] [AC:AE000241:U00096] [PN:orf, hypothetical protein] [GN:b1447] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 131 of 400 of the complete genome.] [NT:f149; This 149 aa ORF is 31 pct identical (11 gaps)] [LE:9124] [RE:9573] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14097163_f1_50 3330 7102 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14120465_f1_56 3331 7103 513 170 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14454632_f1_194 3332 7104 177 58 225 1.1e−18 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14460882_c1_1104 3333 7105 177 58 234 1.2e−19 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14460882_f3_776 3334 7106 183 60 128 6.0e−08 Description gp:[GI:g1022726] [LN:SHU35635] [AC:U35635] [PN:unknown] [OR:Staphylococcus haemolyticus] [SR:Staphylococcus haemolyticus strain=Y176] [DB:genpept-bct1] [DE:Staphylococcus haemolyticus IS1272 ORF1 and ORF2 genes, complete cds.] [NT:ORF1] [LE:1101] [RE:1922] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14478377_c3_1383 3335 7107 1149 382 637 2.3e−62 Description sp:[LN:HMPA_BACSU] [AC:P49852] [GN:HMP:ANE3] [OR:BACILLUS SUBTILIS] [DE:FLAVOHEMOPROTEIN (HAEMOGLOBIN-LIKE PROTEIN] [FLAVOHEMOGLOBIN)] [SP:P49852] [DB:swissprot] >pir:[LN:B69642] [AC:B69642] [PN:flavohemoglobin hmp] [GN:hmp] [CL:flavohemoglobin:cytochrome-b5 reductase homology:globin homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1011920:g1063247] [LN:BAC168TRP2] [AC:D781891 [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis hmp DNA for 7 ORFs, complete cds.] [NT:high homology to flavohemoprotein (Haemoglobin-like] [LE:999] [RE:2198] [DI:direct] >gp:[GI:e1181505:g2632025] [LN:BSAJ2571] [AC:AJ002571] [PN:YkiA] [GN:ykiA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [NT:Flavohemoprotein] [SP:P49852] [LE:24916] [RE:26115] [DI:direct] >gp:[GI:e1183324:g2633658] [LN:BSUB0007] [AC:Z99110:AL009126] [PN:flavohemoglobin] [GN:hmp] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21): from 1194391 to 1411140.] [NT:alternate gene name:ykiA] [SP:P49852] [LE:177865] [RE:179064] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14494461_c2_1178 3336 7108 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14500052_f1_64 3337 7109 204 67 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14538202_c3_1510 3338 7110 762 253 1034 2.0e−104 Description sp:[LN:V296_BACSU] [AC:P80866] [GN:YURI] [OR:BACILLUS SUBTILIS] [DE:VEGETATIVE PROTEIN 296 (VEG296)] [SP:P80866] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14564005_f2_456 3339 7111 249 82 87 0.0016 Description pir:[LN:B69341] [AC:B69341] [PN:cobalt transport protein (cbiQ-1) homolog] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2649885] [LN:AE001054] [AC:AE001054:AE000782] [PN:cobalt transport protein (cbiQ-1)] [GN:AF0730] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 53 of 172 of the complete genome.] [NT:similar to GP:1419077 percent identity:32.61;] [LE:978] [RE:1700] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14642203_c3_1363 3340 7112 834 277 772 1.2e−76 Description pir:[LN:G70080] [AC:G70080] [PN:conserved hypothetical protein yxkD] [GN:yxkD] [CL:conserved hypothetical protein yitT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186383:g2636419] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:yxkD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [NT:similar to hypothetical proteins] [LE:188319] [RE:189155] [DI:complement] >gp:[GI:d1012387:g1783243] [LN:D83026] [AC:D83026:D45911] [GN:yxkD] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence covering lic-cel region.] [NT:homologous to jojC gene product (B. subtilis;] [LE:35310] [RE:36146] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14648452_c3_1464 3341 7113 801 266 346 1.6e−31 Description gp:[GI:e244971:g1340128] [LN:SA1234] [AC:X97985] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S.aureus orfs 1, 2, 3 & 4.] [NT:ORF1] [LE:537] [RE:1304] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14875890_c3_1412 3342 7114 846 281 734 1.2e−72 Description gp:[GI:e1359127:g4007669] [LN:SC4B5] [AC:AL034443] [PN:putative oxidoreductase] [GN:SC4B5.01c] [OR:Streptomyces coelicolor] [DB:genpept-bct1] [DE:Streptomyces coelicolor cosmid 4B5.] [NT:SC4B5.01c, probable oxidoreductase, len; 277aa,] [LE:52] [RE:885] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14878807_f2_599 3343 7115 960 162 2.8e−09 Description gp:[GI:e321943:g2664264] [LN:EFAS48C] [AC:Y12234] [PN:hypothetical protein] [OR:Enterococcus faecalis] [DB:genpept-bct1] [DE:E. faecalis plasmid DNA containing gene cluster involved in production and immunity to peptide antibiotic AS-48.] [NT:ORF7] [LE:5043] [RE:6266] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14886052_c3_1386 3344 7116 495 164 307 2.2e−27 Description sp:[LN:YQGC_BACSU] [AC:P54486] [GN:YQGC] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 17.3 KD PROTEIN IN CCCA-SODA INTERGENIC REGION] [SP:P54486] [DB:swissprot] >pir:[LN:G69955] [AC:G69955] [PN:hypothetical protein yqgC] [GN:yqgC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1013185:g1303850] [LN:BACJH642] [AC:D84432:D82370] [PN:YqgC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheA1)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:132903] [RE:133385] [DI:direct] >gp:[GI:e1185770:g2634936] [LN:BSUB0013] [AC:Z99116:AL009126] [GN:yqgC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [SP:P54486] [LE:190236] [RE:190718] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_14970251_f3_623 3345 7117 294 97 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_15057762_c2_1198 3346 7118 1575 524 1194 2.2e−121 Description sp:[LN:MEMP_ALCEU] [AC:Q07252] [OR:ALCALIGENES EUTROPHUS] [DE:MEMBRANE PROTEIN] [SP:Q07252] [DB:swissprot] >pir:[LN:I39534] [AC:I39534:S33452] [PN:hypothetical protein] [OR:Alcaligenes eutrophus] [DB:pir2] >gp:[GI:g311309] [LN:AELACDEH] [AC:Z22737] [PN:putative membrane-bound protein with four times] [OR:Ralstonia eutropha] [DB:genpept-bct1] [DE:A. eutrophus genes for lactate dehydrogenase, putative membrane-bound protein with four times repitition of Pro-Ser-Ala at the N-terminus (function unknown) and transglycosidase (partial).] [SP:Q07252] [LE:962] [RE:2503] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_1561_c1_1025 3347 7119 1944 647 1406 7.6e−144 Description pir:[LN:A69814] [AC:A69814] [PN:ABC transporter (ATP-binding protein) homolog yfmR] [GN:yfmR] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182716:g2633050] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yfmR] [FN:unknown] [OR:Bacillus subtilis] (DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:208365] [RE:210254] [DI:direct] >gp:[GI:e1182727:g2633061] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfmR] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:6245] [RE:8134] [DI:direct] >gp:[GI:d1020922:g2116756] [LN:D86418] [AC:D86418] [PN:YfmR] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 69–70 degree region, partial sequence.] [LE:2937] [RE:4826] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_15661088_c2_1162 3348 7120 513 170 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_15751312_f1_164 3349 7121 2136 711 1980 1.1e−204 Description sp:[LN:ADH2_ENTHI] [AC:Q24803:Q27649] [GN:ADH2] [OR:ENTAMOEBA HISTOLYTICA] [EC:1.1.1.1:1.2.1.10] [DE:DEHYDROGENASE, (ACDH)] [SP:Q24803:Q27649] [DB:swissprot] >gp:[GI:g488430] [LN:EHU04863] [AC:U04863] [PN:alcohol dehydrogenase 2] [OR:Entamoeba histolytica] [DB:genpept-inv1] [DE Entamoeba histolytica HM1:IMSS alcohol dehydrogenase 2 (EhADH2)mRNA, complete cds.] [NT:The derived amino acid sequence of EhADH2 is] [LE:3] [RE:2615] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_15752262_f3_666 3350 7122 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_15756542_c2_1195 3351 7123 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_157767_c3_1366 3352 7124 1077 358 534 1.9e−51 Description gp:[GI:d1045428:g5106360] [LN:AB028629] [AC:AB028629] [PN:lipase] [GN:lipA] [OR:Clostridium perfringens] [SR:Clostridium perfringens (strain:13) DNA, clone:pSB235] [DB:genpept] [DE:Clostridium perfringens metB, cysK, ygaG, lipA genes for cystathionine beta-synthase, cysteine synthase, hypothetical protein, lipase, partial and complete cds.] [NT:esterase] [LE:3248] [RE:4183] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_15781336_c2_1131 3353 7125 471 156 150 9.5e−11 Description pir:[LN:C70059] [AC:C70059] [PN:hypothetical protein ywiB] [GN:ywiB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186235:g2636271] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:ywiB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21): from 3798401 to 4010550.] [LE:35970] [RE:36398] [DI:complement] >gp:[GI:e324352:g2224755] [LN:BSZ97024] [AC:Z97024] [GN:ywiB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ywiA, sbo, ywiB, argS and narK genes.] [LE:1255] [RE:1683] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_16522890_f1_189 3354 7126 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_16603207_f3_710 3355 7127 378 125 217 7.5e−18 Description pir:[LN:S72776] [AC:S72776] [PN:B1496_F1_41 protein] [OR:Mycobacterium leprae] [DB:pir2] >gp:[GI:g466873] [LN:U00013] [AC:U00013] [PN:B1496_F1_41] [OR:Mycobacterium leprae] [DB:genpept-bct1] [DE:Mycobacterium leprae cosmid B1496.] [LE:29815] [RE:30312] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_166062_c2_1287 3356 7128 123 40 50 0.030 Description pir:[LN:573871] [AC:S73871] [PN:type I restriction enzyme ecokI specificity protein homolog:hypothetical protein H10_orf145L:hypothetical protein H10_orf145L] [OR:Mycoplasma pneumoniae] [SR:ATCC 29342, , ATCC 29342] [SR:ATCC 29342,] [DB:pir2] >gp:[GI:g1674242] [LN:MPAE000053] [AC:AE000053:U00089] [GN:H10_orf145L] [OR:Mycoplasma pneumoniae] [DB:genpept-bct2] [DE:Mycoplasma pneumoniae section 53 of 63 of the complete genome.] [NT:type I restriction enzyme ecokI specificity protein] [LE:3554] [RE:3991] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_166713_c2_1263 3357 7129 2001 666 2697 1.2e−280 Description sp:[LN:UVRB_BACSU] [AC:P37954:O34455] [GN:UVRB:DINA:UVR] [OR:BACILLUS SUBTILIS] [DE:EXCINUCLEASE ABC SUBUNIT B (DINA PROTEIN)] [SP:P37954:O34455] [DB:swissprot] >pir:(LN:G69729] [AC:G69729:I39817:B37317] [PN:excinuclease ABC chain B:DNA repair protein DinA:excision endonuclease ABC,, chain B:hypothetical protein (DNA damage-inducible A76 promoter 3′ region):UrvB homolog DinA] [GN:uvrB:uvr:dinA] [CL:excinuclease ABC chain B:DEAD/H box helicase homology] [OR:Bacillus subtilis] [EC:3.1.-.-] [DB:pir2] >gp:[GI:e1184423:g2636043] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:excinuclease ABC (subunit B)] [GN:uvrB] [FN:excision of ultraviolet light-induced] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name: dinA, uvrA] [SP:P37954] [LE:14915] [RE:16900] [DI:complement] >gp:[GI:g2618841] [LN:AF017113] [AC:AF017113] [PN:excinuclease ABC subunit B] [GN:uvrB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:13393] [RE:15378] [DI:direct] >gp:[GI:e1184423:g2636043] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:excinuclease ABC (subunit B)] [GN:uvrB] [FN:excision of ultraviolet light-induced] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [NT:alternate gene name:dinA, uvrA] [SP:P37954] [LE:14915] [RE:16900] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_16677343_c1_925 3358 7130 447 148 107 3.4e−06 Description sp:[LN:Y357_METJA] [AC:Q57803] [GN:MJ0357] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ0357] [SP:Q57803] [DB:swissprot] >pir:[LN:E64344] [AC:E64344] [PN:hypothetical protein MJ0357] [OR:Methanococcus jannaschii] [DB:pir2] [MP:REV326407–325940] >gp:[GI:g1591066] [LN:U67489] [AC:U67489:L77117] [PN:M. jannaschii predicted coding region MJ0357] [GN:MJ0357] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 31 of 150 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:1632] [RE:2099] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_16834512_c3_1401 3359 7131 1380 459 661 6.7e−65 Description sp:[LN:PHR_BACFI] [AC:Q04449] [GN:PHR] [OR:BACILLUS FIRMUS] [EC:4.1.99.3] [DE:(PHOTOREACTIVATING ENZYME] [FRAGMENT)] [SP:Q04449] [DB:swissprot] >gp:[GI:g142783] [LN:BACCTA] [AC:M94110] [PN:DNA photolyase] [GN:phr] [OR:Bacillus firmus] [SR:Bacillus firmus (strain OF4) DNA] [DB:genpept-bct1] [EC:4.1.99.3] [DE:Bacillus firmus DNA photolyase (phr) gene, 3′ end, and cytochromeoxidase (cta) operon.] [NT:putative] [LE:1] [RE:1020] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_16850303_c1_1090 3360 7132 477 158 510 6.7e−49 Description sp:[LN:SMPB_BACSU] [AC:O32230] [GN:SMPB] [OR:BACILLUS SUBTILIS] [DE:SMALL PROTEIN B HOMOLOG] [SP:O32230] [DB:swissprot] >pir:[LN:F70027] [AC:F70027] [PN:conserved hypothetical protein yvaI] [GN:yvaI] [CL:small protein smpB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186048:g2635873] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvaI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [SP:O32230] [LE:50760] [RE:51230] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_17011562_c3_1354 3361 7133 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_181500_c3_1353 3362 7134 798 265 415 7.8e−39 Description sp:[LN:TAGA_BACSU] [AC:P27620] [GN:TAGA] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID BIOSYNTHESIS PROTEIN A] [SP:P27620] [DB:swissprot] >pir:[LN:B49757] [AC:B49757:B69720] [PN:polyglycerol phosphate techoic acid biosynthesis protein tagA] [GN:tagA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143724] [LN:BACTAGABCD] [AC:M57497] [GN:tagA] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) DNA] [DB:genpept-bct1] [DE:B. subtilis tagA, tagB, tagC and tagD genes, complete cds.] [NT:putative] [LE:800] [RE:1570] [DI:direct] >gp:[GI:e1184481:g2636101] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:tagA] [FN:polyglycerol phosphate assembly and export] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P27620] [LE:83340] [RE:84110] [DI:direct] >gp:[GI:e1184481:g2636101] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:tagA] [FN:polyglycerol phosphate assembly and export] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P27620] [LE:83340] [RE:84110] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_187568_c2_1149 3363 7135 327 108 178 1.0e−13 Description pir:[LN:F70008] [AC:F70008] [PN:hypothetical protein yufC] [GN:yufC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184242:g2635660] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yufC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:53800] [RE:54084] [DI:direct] >gp:[GI:e311513:g1934775] [LN:BSZ93932] [AC:Z93932] [PN:unknown] [GN:yufC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment from yufA to yufE.] [LE:7444] [RE:7728] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_187916_c2_1189 3364 7136 612 203 344 2.6e−31 Description gp:[GI:e1314177:g3395518] [LN:PMAJ84] [AC:AJ000084] [PN:putative acetyl transferase] [GN:pat] [OR:Proteus mirabilis] [DB:genpept-bct1] [DE:Proteus mirabilis ccm and pat genes and partial ygbA gene.] [LE:949] [RE:1506] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_189187_c1_1040 3365 7137 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19532277_c1_1120 3366 7138 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19537812_c2_1293 3367 7139 150 49 39 0.0042 Description pir:[LN:A70221] [AC:A70221] [PN:conserved hypothetical protein BBC08] [OR:Borrelia burgdorferi] [SR:, Lyme disease spirochete] [DB:pir2] >gp:[GI:g2689920] [LN:AE000791] [AC:AE000791] [PN:conserved hypothetical protein] [GN:BBC08] [OR:Borrelia burgdorferi] [SR:Lyme disease spirochete] [DB:genpept-bct2] [DE:Borrelia burgdorferi plasmid cp9, complete plasmid sequence.] [NT:similar to GB:U03641 PID:458212 percent identity:] [LE:5534] [RE:5980] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19547783_f2_493 3368 7140 771 256 448 2.5e−42 Description gp:[GI:g4481749] [LN:AF007865] [AC:AF007865] [PN:BacR] [GN:bacR] [OR:Bacillus licheniformis] [DB:genpept-bct2] [DE:Bacillus licheniformis bacitracin synthetase operon, complete sequence; BacS (bacS), BcrA (bcrA), BcrB (bcrB), and BcrC (bcrC) genes, complete cds.] [NT:44488] [LE:44497] [RE:45213] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_195885_f2_436 3369 7141 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19589187_f3_689 3370 7142 207 68 57 0.019 Description pir:[LN:F71027] [AC:F71027] [PN:hypothetical protein PH1514] [GN:PH1514] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031565:g3257939] [LN:AP000006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:310aa long hypothetical protein] [GN:PH1514] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001–1485000 nt. position(6/7).] [LE:183119] [RE:184051] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19696951_c3_1486 3371 7143 183 60 193 2.6e−15 Description pir:[LN:A70028] [AC:A70028] [PN:hypothetical protein yvaL] [GN:yvaL] [CL:protein-export protein secG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186051:g2635876] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvaL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [LE:54605] [RE:54835] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19704062_f2_528 3372 7144 183 60 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_197127_c3_1411 3373 7145 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19714012_c1_939 3374 7146 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_197152_c3_1343 3375 7147 348 115 257 4.3e−22 Description gp:[GI:d1036083:g4001727] [LN:AB015981] [AC:AB015981] [PN:MnhC] [GN:mnhC] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:3642] [RE:3983] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19726575_c1_942 3376 7148 155 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19765965_c1_1098 3377 7149 249 82 323 4.4e−29 Description gp:[GI:g2226349] [LN:AF003593] [AC:AF003593] [PN:CspC] [GN:cspC] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus CspC (cspC) gene, complete cds.] [NT:similar to major cold-shock protein] [LE:444] [RE:644] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19766886_f1_59 3378 7150 435 144 167 1.9e−12 Description gp:[GI:e1294701:g3171734] [LN:BTPGI2XX] [AC:X13481] [OR:Bacillus thuringiensis] [DB:genpept-bct1] [DE:Bacillus thuringiensis plasmid pGI2 with transposon Tn4430.] [NT:ORF 2] [LE:6037] [RE:6849] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19804502_f2_364 3379 7151 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19814387_c1_966 3380 7152 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_19929556_f2_545 3381 7153 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2007677_f2_513 3382 7154 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2007767_c2_1199 3383 7155 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20110186_f3_688 3384 7156 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20322153_c2_1212 3385 7157 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20350875_c3_1515 3386 7158 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20485663_f2_563 3387 7159 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20491385_f1_252 3388 7160 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20604832_f3_692 3389 7161 558 185 106 0.012 Description gp:[GI:g552163] [LN:PFA10B] [AC:J03986] [OR:Plasmodium falciparum] [SR:P. falciparum (strain IMTM22) asexual erythrocytic form DNA, clon] [DB:genpept-inv1] [DE:P. falciparum 10b antigen gene, partial cds.] [NT:10b antigen] [LE:<1] [RE:>1124] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20707877_c3_1457 3390 7162 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20734387_f3_640 3391 7163 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20830417_c3_1332 3392 7164 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20893828_c1_974 3393 7165 219 72 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_20900017_c2_1239 3394 7166 2169 722 3396 0.0 Description gp:[GI:e1393150:g4490609] [LN:SAU133495] [AC:AJ133495] [PN:ribonucelotide reductase major subunit] [GN:rir1] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus ribonucleotide reductase operon.] [LE:4481] [RE:2604] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_209452_f1_276 3395 7167 648 215 754 9.4e−75 Description gp:[GI:e255528:g1617429] [LN:SEABCTS] [AC:X99127] [PN:membrane protein] [FN:iron repressible ABC transport system] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis gene encoding ABC transport system.] [LE:878] [RE:1624] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_209627_c3_1444 3396 7168 1032 343 1571 2.5e−161 Description gp:[GI:e1393151:g4490610] [LN:SAU133495] [AC:AJ133495] [PN:ribonucleotide reductase minor subunit] [GN:rir2] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus ribonucleotide reductase operon.] [LE:2722] [RE:3693] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21490925_c1_1005 3397 7169 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21509430_c1_962 3398 7170 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21525061_c1_1016 3399 7171 681 226 110 0.00014 Description sp:[LN:YB69_HAEIN] [AC:P44118] [GN:HI1169] [OR:HAEMOPHILUS INFLUENZAE] [DE:HYPOTHETICAL PROTEIN HI1169] [SP:P44118] [DB:swissprot] >pir:[LN:A64021] [AC:A64021] [PN:hypothetical protein HI1169] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1574096] [LN:U32797] [AC:U32797:L42023] [PN:H. influenzae predicted coding region HI1169] [GN:HI1169] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 112 of 163 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:511] [RE:1077] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21537811_c1_1007 3400 7172 1137 378 925 7.1e−93 Description sp:[LN:CSBB_BACSU] [AC:Q45539] [GN:CSBB] [OR:BACILLUS SUBTILIS] [DE:CSBB PROTEIN] [SP:Q45539] [DB:swissprot] >pir:[LN:JC5173] [AC:JC5173:G69607] [PN:stress response protein csbB] [GN:csbB] [CL:stress response protein csbB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g1387979] [LN:BACCSBB] [AC:L77099] [GN:csbB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis csbB gene, complete cds.] [NT:similar to hypothetical protein from Synechocystis] [LE:310] [RE:1299] [DI:direct] >gp:[GI:e1182849:g2633183] [LN:BSUB0005] [AC:Z99108:AL009126] [PN:stress response protein] [GN:csbB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:alternate gene name: yfhN] [SP:Q45539] [LE:127505] [RE:128494] [DI:direct] >gp:[GI:d1025396:g2804544] [LN:D85082] [AC:D85082] [PN:YfhN] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:20396] [RE:21385] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21617215_f1_36 3401 7173 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21726510_f2_612 3402 7174 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21751287_f3_684 3403 7175 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21883512_c3_1512 3404 7176 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21897308_f2_541 3405 7177 261 86 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_21963877_c2_1273 3406 7178 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22265936_c3_1452 3407 7179 1128 375 1557 7.6e−160 Description pir:[LN:A55856] [AC:A55856] [PN:11m protein] [GN:11m] [CL:lipophilic protein lim] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:d1023388:g4433370] [LN:STASRM551A] [AC:D21131] [PN:lipophilic protein which affects bacterial lysis] [GN:11m] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:SRM551) DNA, clone_lib:lambda ZapII] [DB:genpept-bct1] [DE:Staphylococcus aureus gene for a participant in homogeneous expression of high-level methicillin resistance, complete cds.] [LE:148] [RE:1203] [DI direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22381693_c3_1472 3408 7180 852 283 1187 1.2e−120 Description sp:[LN:LGT_STAAU] [AC:P52282] [GN:LGT] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.4.99.-] [DE:PROLIPOPROTEIN DIACYLGLYCERYL TRANSFERASE,] [SP:P52282] [DB:swissprot] >gp:[GI:g1016770] [LN:SAU35773] [AC:U35773] [PN:prolipoprotein diacylglyceryl transferase] [GN:lgt] [FN:transfer of diglyceride moiety to SH Group of] [OR:Staphylococcus aureus] [DB genpept-bct1] [DE:Staphylococcus aureus prolipoprotein diacylglyceryl transferase(lgt) gene, complete cds.] [LE:297] [RE:1136] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22391068_c1_1046 3409 7181 1056 351 1284 6.4e−131 Description gp:[GI:e1330455:g3724158] [LN:SAA005352] [AC:AJ005352] [PN:lipoprotein] [GN:sstD] [FN:iron transporter] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus, Sst putative iron transport operon.] [LE:3066] [RE:4095] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22446053_c2_1132 3410 7182 726 241 335 2.4e−30 Description pir[LN:A64479] [AC:A64479] [PN:DNA-(apurinic or apyrimidinic site) lyase,:endonuclease III] [CL:Methanococcus jannaschii conserved DNA-(apurinic or apyrimidinic site) lyase] [OR:Methanococcus jannaschii] [EC:4.2.99.18] [DB:pir2] [MP:F0R1403656–1404318] >gp:[GI:g1592082] [LN:U67584] [AC:U67584:L77117] [PN:endonuclease III, putative (nth2)] [GN:MJ1434] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 126 of 150 of the complete genome.] [NT:similar to GB:U11289 SP:P39788 PID:533099] [LE:7078] [RE:7740] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22462926_c1_1122 3411 7183 783 260 669 9.5e−66 Description pir:[LN:H70023] [AC:H70023] [PN:N-acetyl-glucosamine catabolism homolog yutF] [GN:yutF] [CL:nagD protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184308:g2635726] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yutF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to N-acetyl-glucosamine catabolism] [LE:120087] [RE:120857] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22687900_c3_1369 3412 7184 681 226 685 1.9e−67 Description pir:[LN:G70000] [AC:G70000] [PN:two-component response regulator [YtsB] homolog ytsA] [GN:ytsA] [CL:ompR protein:response regulator homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185913:g2635524] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to two-component response regulator [YtsB] [LE:114498] [RE:115193] [DI:complement] >gp:[GI:g2293175] [LN:AF008220] [AC:AF008220] [PN:signal transduction regulator] [GN:ytsA) [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:65234] [RE:65929] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22776938_c2_1323 3413 7185 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_22895400_f3_753 3414 7186 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23427750_c1_938 3415 7187 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23438461_c1_926 3416 7188 687 228 103 0.029 Description gp:[GI:g5306158] [LN:AF160864] [AC:AF160864] [PN:orf1386] [GN:orf1386] [OR:Mitochondrion Tetrahymena pyriformis] [SR:Tetrahymena pyriformis] [DB:genpept] [DE:Tetrahymena pyriformis mitochondrial DNA, complete genome.] [NT:Open reading frame ymf77 (CPGN); ATA initiation] [LE:22317] [RE:26477] [DI complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23439005_f1_6 3417 7189 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23429061_c1_984 3418 7190 531 176 258 3.4e−22 Description pir:[LN:F69927] [AC:F69927] [PN:hypothetical protein yosT] [GN:yosT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185472:g2634393] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yosT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [LE:157797] [RE:158246] [DI:complement] >gp:[GI:g3025644] [LN:AF020713] [AC:AF020713] [PN:unknown] [GN:yosT] [OR:Bacteriophage SPBc2] [DB:genpept-phg] [DE:Bacteriophage SPBc2 complete genome.] [LE:127274] [RE:127723] [DI:direct] >gp:[GI:g2522410] [LN:AF012906] [AC:AF012906:U80600] [PN:unknown] [GN:yojV] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis yojP gene, partial cds; yojQ/S, yojR, yojT, yojU, yojV, yojW, yojX, yojY, yojZ, and yokA genes, complete cds.] [LE:4921] [RE:5370] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23444838_c2_1267 3419 7191 264 87 373 2.2e−34 Description gp:[GI:e1387399:g4379428] [LN:SAAJ3781] [AC:AJ223781] [PN:thioredoxin reductase] [GN:trxB] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:1.6.4.5] [DE:Staphylococcus aureus trxB gene.] [LE:1262] [RE:2197] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23445175_f3_674 3420 7192 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23445890_c2_1177 3421 7193 492 163 333 3.8e−30 Description pir:[LN:S74709] [AC:S74709] [PN:hypothetical protein s111188] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1017593:g1651934] [LN:D90901] [AC:D90901:AB001339] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 3/27, 271600–402289.] [NT:ORF_ID:s111188] [LE:42106] [RE:42600] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23446912_f2_597 3422 7194 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2345062_f3_639 3423 7195 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23450_c3_1490 3424 7196 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23469552_c1_923 3425 7197 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23475892_c1_1121 3426 7198 1362 453 707 9.0e−70 Description pir:[LN:G70015] [AC:G70015] [PN:conserved hypothetical protein yunD] [GN:yunD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184316:g2635734] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yunD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:125728] [RE:127116] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23476517_c2_1259 3427 7199 1296 431 638 1.8e−62 Description sp:[LN:CMF1_BACSU] [AC:P39145] [GN:COMFA:COMF1] [OR:BACILLUS SUBTILIS] [DE:COMF OPERON PROTEIN 1] [SP:P39145] [DB:swissprot] >pir:[LN:G69602) [AC:G69602:S77620:S35011:I40387:S28597] [PN:late competence protein required for DNA uptake comFA:ATP-dependent DNA helicase/translocase comF1] [GN:comFA:comF1] [CL:DEAD/H box helicase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g580841] [LN:BSCOMFG] [AC:Z18629] [PN:F1] [GN:comForf1] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis comF gene.] [SP:P39145] [LE:952] [RE:2343] [DI:direct] >gp:[GI:e1184453:g2636073] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:late competence protein] [GN:comFA] [FN:required for DNA uptake (competence)] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P39145] [LE:44137] [RE:45528] [DI:complement] >gp:[GI:g1762332] [LN:BSU56901] [AC:U56901] [GN:comFA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis putative transcriptional regulator (yvhJ), Ycr59c/YigZ homolog (yvhK), histidine kinase (degS), transcriptional regulator of degradation enzyme (degU), (degV), (comFA), (comFB), (comFC), flagellar protein (yviB), negative regulator of flagellin(flgM), flagellar protein (yviC), flagellar-hook associated protein1 (flgK), flagellar-hook associated protein 3 (flgL), (yviE), transmembrane protein (yviF), (csrA), flagellin (hag), flagellar protein (yviH), flagellar hook-associated protein 2 (fliD), flagellar protein (fliS), flagellar protein (fliT), sigma-54modulator homolog (yviI), and (secA) genes, complete cds.] [NT:involved in transformation] [LE:5065] [RE:6456] [DI:direct] >gp:[GI:e1184453:g2636073] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:late competence protein] [GN:comFA] [FN:required for DNA uptake (competence)] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P39145] [LE:44137] [RE:45528] [DI:complement]

ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23492127_f2_368 3428 7200 453 150 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23494051_f2_444 3429 7201 1101 366 336 1.8e−30 Description sp:[LN:YHCK_BACSU] [AC:P54595] [GN:YHCK] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 40.7 KD PROTEIN IN CSPB-GLPP INTERGENIC REGION] [SP:P54595] [DB:swissprot] >pir:[LN:G69822] [AC:G69822] [PN:conserved hypothetical protein yhcK] [GN:yhcK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e233892:g1239987] [LN:BS75DGREG] [AC:X96983] [PN:hypothetical protein] [GN:yhcK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis chromosomal DNA (region 75 degrees:cspB upstream of glpPFKD operon).] [NT:similarity to hypothetical proteins from] [SP:P54595] [LE:6616] [RE:7695] [DI:complement] >gp:[GI:e1182901:g2633235] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yhcK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21): from 802821 to 1011250.] [NT:similar to hypothetical proteins] [SP:P54595] [LE:182422] [RE:183501] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_235042_c1_1064 3430 7202 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2352140_f3_902 3431 7203 156 51 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23523326_c3_1385 3432 7204 1242 413 416 6.1e−39 Description sp:[LN:YICK_ECOLI] [AC:P31436] [GN:YICK] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 43.5 KD PROTEIN IN SELC-NLPA INTERGENIC REGION] [SP:P31436] [DB:swissprot] >pir:[LN:D65167] [AC:D65167] [PN:probable membrane protein yicK] [GN:yicK] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g290508] [LN:ECOUW82] [AC:L10328] [GN:o394] [FN:unknown] [OR:Escherichia coli] [SR:Escherichia coli K12 strain MG1655; lambda clones EC14–52] [DB:genpept-bct1] [DE:E. coli; the region from 81.5 to 84.5 minutes.] [NT:similar to unidentified ORF near 47 minutes] [LE:26345] [RE:27529] [DI:direct] >gp:[GI:g1790091] [LN:AE000443] [AC:AE000443:U00096] [PN:two-module transport protein] [GN:yicK] [FN:putative transport; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 333 of 400 of the complete genome.] [NT:o394; 100 pct identical to YICK_ECOLI SW:] [LE:8286] [RE:9470] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23572177_c3_1482 3433 7205 1194 397 1792 9.5e−185 Description gp:[GI:e1393155:g4490614] [LN:SAU133520] [AC:AJ133520] [PN:phosphoglycerate kinase] [GN:pgk] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus gap operon (gapR, gap, pgk and tpi genes).] [LE:2995] [RE:4185] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23600175_f2_616 3434 7206 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23617338_f1_66 3435 7207 528 175 215 1.2e−24 Description sp:[LN:YAGU_ECOLI] [AC:P77262] [GN:YAGU] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 23.0 KD PROTEIN IN INTF-EAEH INTERGENIC REGION] [SP:P77262] [DB:swissprot] >pir:[LN:G64754] [AC:G64754] [PN:probable membrane protein yagU] [GN:yagU] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1657488] [LN:ECU73857] [AC:U73857] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli chromosome minutes 6–8.] [NT:hypothetical protein] [LE:10789] [RE:11403] [DI:direct] >gp:[GI:g1786481] [LN:AE000136] [AC:AE000136:U00096] [PN:orf, hypothetical protein] [GN:yagU] [FN:orf; Unknown] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 26 of 400 of the complete genome.] [NT:o204; 26 pct identical to 46 residues of approx.] [LE:7372] [RE:7986] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23621010_c1_971 3436 7208 843 280 167 1.5e−10 Description pir:[LN:E69777] [AC:E69777] [PN:transcription regulator AraC/XylS family homolog ydeC] [GN:ydeC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020103:g1881323] [LN:AB001488] [AC:AB001488] [GN:ydeC] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE HTH_ARAC_FAMILY OF TRANSCRIPTIONAL] [LE:94733] [RE:95608] [DI:complement] >gp:[GI:e1182481:g2632815] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydeC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to transcriptional regulator [AraC/XylS] [LE:158478] [RE:159353] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23626000_f2_582 3437 7209 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23629040_c2_1318 3438 7210 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23631928_f2_520 3439 7211 228 75 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23634651_c1_964 3440 7212 1044 347 549 5.0e−53 Description pir:[LN:H70000] [AC:H70000] [PN:two-component sensor histidine kinase homolog ytsB] [GN:ytsB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185912:g2635523] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to two-component sensor histidine kinase] [LE:113501] [RE:114505] [DI:complement] >gp:[GI:g2293176] [LN:AF008220] [AC:AF008220] [PN:signal transduction protein kinase] [GN:ytsB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:65922] [RE:66926] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23672137_c2_1196 3441 7213 957 318 260 6.6e−32 Description pir:[LN:S76964] [AC:S76964] [PN:hypothetical protein] [OR:Synechocystis sp.] [SR:PCC 6803, , PCC 6803] [SR:PCC 6803,] [DB:pir2] >gp:[GI:d1019609:g1653966] [LN:D90917] [AC:D90917:AB001339] [PN:47 kD protein] [OR:Synechocystis sp.] [SR:Synechocystis sp. (strain:PCC6803) DNA] [DB:genpept-bct1] [DE:Synechocystis sp. PCC6803 complete genome, 27/27, 3418852–3573470.] [NT:ORF_ID:slr0609] [LE:151573] [RE:152724] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23672562_c1_924 3442 7214 297 98 86 0.0034 Description gp:[GI:e8900:g1335718] [LN:PFRESAR1] [AC:X05182] [PN:ring-infected eryrthrocyte surface antigen] [GN:RESA] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:P. falciparum FC27 Ag46 RESA mRNA for ring-infected eryrthrocyte surface antigen.] [SP:P13830] [LE:<1] [RE:>955] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23703750_c1_1095 3443 7215 639 212 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23728412_c3_1509 3444 7216 699 232 726 8.7e−72 Description pir:[LN:C70020] [AC:C70020] [PN:conserved hypothetical protein yusB] [GN:yusB] [CL:probable transport protein yaeE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184352:g2635770] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:164664] [RE:165332] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23844575_c2_1274 3445 7217 1062 353 1442 1.2e−147 Description gp:[GI:e1393153:g4490612] [LN:SAU133520] [AC:AJ133520] [PN:gap regulator] [GN:gapR] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus gap operon (gapR, gap, pgk and tpi genes).] [LE:779] [RE:1792] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23984775_f1_83 3446 7218 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_23989061_f2_399 3447 7219 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2401430_c3_1473 3448 7220 762 253 1076 7.1e−109 Description gp:[GI:e1387399:g4379428] [LN:SAAJ3781] [AC:AJ223781] [PN:thioredoxin reductase] [GN:trxB] [OR:Staphylococcus aureus] [DB:genpept-bct1] [EC:1.6.4.5] [DE:Staphylococcus aureus trxB gene.] [LE:1262] [RE:2197] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24022582_f2_316 3449 7221 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24033567_c2_1316 3450 7222 450 149 207 8.6e−17 Description pir:[LN:G70023] [AC:G70023] [PN:hypothetical protein yutE] [GN:yutE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184309:g2635727] [LN:BSUB0017] EAC:Z99120:AL009126] [GN:yutE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:120886] [RE:121320] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24218785_c2_1275 3451 7223 1047 348 1597 4.4e−164 Description gp:[GI:e1393154:g4490613] [LN:SAU133520] [AC:AJ133520] [PN:glyceraldehyde-3-phosphate dehydrogenase] [GN:gap] [FN:transferrin binding protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus gap operon (gapR, gap, pgk and tpi genes).] [NT:putative] [LE:1845] [RE:2855] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24230001_f2_362 3452 7224 258 85 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24240888_f1_281 3453 7225 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24242285_c3_1516 3454 7226 1056 351 439 2.2e−41 Description gp:[GI:g4981378] [LN:AE001751] [AC:AE001751:AE000512] [PN:hemolysin-related protein] [GN:TM0845] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 63 of 136 of the complete genome.] [NT:similar to GB:AE000783 percent identity:61.61;] [LE:5310] [RE:6677] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24251500_f2_416 3455 7227 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24253153_f1_150 3456 7228 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24256287_c2_1260 3457 7229 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24258388_c3_1405 3458 7230 507 168 102 0.0053 Description gp:[GI:e1407794:g4493938] [LN:PFMAL3P5] [AC:AL034556] [GN:MAL3P5.10] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P5, complete sequence.] [NT:predicted using hexExon; MAL3P5.10 (PFC0620w),] [LE:46925] [RE:48919] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24259762_f3_679 3459 7231 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24266888_c3_1413 3460 7232 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24272125_c2_1292 3461 7233 261 86 72 0.024 Description gp:[GI:g942589] [LN:MIU29676] [AC:U29676:X55271] [PN:unknown] [OR:Mycoplasma iowae] [DB:genpept-bct2] [DE:Mycoplasma iowae 16S rRNA gene, complete sequence, and 23S rRNA gene, partial sequence.] [LE:<1] [RE:438] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24297000_f2_548 3462 7234 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24329053_c1_979 3463 7235 444 147 142 2.8e−09 Description gp:[GI:g3329623] [LN:CELF36H12] [AC:AF078790] [GN:F36H12.3] [OR:Caenorhabditis elegans] [DB:genpept-inv2] [DE:Caenorhabditis elegans cosmid F36H12.] [NT:coded for by C. elegans cDNA CEMSF30F] [LE:21606:21872:22500:22677] [RE:21701:22454:22629:22875] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24335801_c2_1326 3464 7236 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24345257_f3_652 3465 7237 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24347175_c3_1416 3466 7238 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24391937_c1_1068 3467 7239 759 252 105 0.0062 Description pir:[LN:E70031] [AC:E70031] [PN:hypothetical protein yvcD] [GN:yvcD] [CL:tetratricopeptide repeat homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186169:g2635994] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvcD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [LE:175675] [RE:177129] [DI:complement] >gp:[GI:e313021:g1945645] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvcD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [LE:4542] [RE:5996] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24397952_c1_1067 3468 7240 681 226 119 0.00011 Description pir:[LN:E70031] [AC:E70031] [PN:hypothetical protein yvcD] [GN:yvcD] [CL:tetratricopeptide repeat homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186169:g2635994] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvcD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [LE:175675] [RE:177129] [DI:complement] >gp:[GI:e313021:g1945645] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvcD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [LE:4542] [RE:5996] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24406577_c3_1415 3469 7241 390 129 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24407637_f1_57 3470 7242 243 80 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24415930_f2_310 3471 7243 1068 355 977 2.2e−98 Description pir:[LN:D70024] [AC:D70024] [PN:NADH dehydrogenase homolog yutJ] [GN:yutJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184299:g2635717] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yutJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to NADH dehydrogenase] [LE:110924] [RE:111916] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24429650_c3_1408 3472 7244 1197 398 848 1.0e−84 Description sp:[LN:NAGA_BACSU] [AC:O34450] [GN:NAGA] [OR:BACILLUS SUBTILIS] [EC:3.5.1.25] [DE:DEACETYLASE)] [SP:O34450] [DB:swissprot] >pir:[LN:A69664] [AC:A69664] [PN:N-acetylglucosamine-6-phosphate deacetylase nagA] [GN:nagA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186189:g2636014] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:N-acetylglucosamine-G-phosphate deacetylase] [GN:nagA] [FN:N-acetyl glucosamine utilization] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.5.1.25] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [SP:O34450] [LE:194866] [RE:196056] [DI:direct] >gp:[GI:g2618856] [LN:AF017113] [AC:AF017113] [PN:N-acetylglucosamine 6-P deacetylase] [GN:nagA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:31777] [RE:32967] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24479842_c1_1106 3473 7245 558 185 256 5.5e−22 Description pir:[LN:D69800] [AC:D69800] [PN:conserved hypothetical protein yfhC] [GN:yfhC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182838:g2633172] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to hypothetical proteins] [LE:120274] [RE:120858] [DI:direct] >gp:[GI:d1025385:g2804533] [LN:D85082] [AC:D85082] [PN:YfhC] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:13165] [RE:13749] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24490676_c2_1179 3474 7246 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24506712_c2_1240 3475 7247 975 324 879 5.3e−88 Description gp:[GI:e1330453:g3724156] [LN:SAA005352] [AC:AJ005352] [PN:membrane protein] [GN:sstB] [FN:iron transport] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus, Sst putative iron transport operon.] [LE:1451] [RE:2132] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24507932_c1_1027 3476 7248 600 199 322 5.6e−29 Description pir:[LN:D699241] [AC:D69924] [PN:hypothetical protein yorS] [GN:yorS] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185499:g2634420] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yorS] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21): from 2000171 to 2207900.] [LE:172005] [RE:172523] [DI:complement] >gp:[GI:g3025618] [LN:AF020713] [AC:AF020713] [PN:unknown] [GN:yorS] [OR:Bacteriophage SPBc2] [DB:genpept-phg] [DE:Bacteriophage SPBc2 complete genome.] [LE:112997] [RE:113515] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24611512_c2_1139 3477 7249 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24616050_f2_445 3478 7250 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24640828_c2_1138 3479 7251 516 171 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24642632_f3_765 3480 7252 1245 414 1245 8.7e−127 Description sp:[LN:PEPT_BACSU] [AC:P55179] [GN:PEPT] [OR:BACILLUS SUBTILIS] [EC:3.4.11.—] [DE:PEPTIDASE T, (AMINOTRIPEPTIDASE) (TRIPEPTIDASE)] [SP:P55179] [DB:swissprot] >pir:[LN:H69674] [AC:H69674] [PN:aminotripeptidase,:peptidase T] [GN:pepT] [OR:Bacillus subtilis] [EC:3.4.11.—] [DB:pir2] >gp:[GI:e254163:g1429259] [LN:BSGALE] [AC:X99339] [GN:pepT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis orfs 1,2,3,4, pepT and galE genes.] [SP:P55179] [LE:5267] [RE:6499] [DI:direct] >gp:[GI:e1186391:g2636427] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:peptidase T (tripeptidase)] [GN:pepT] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.4.11.—] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [SP:P55179] [LE:195467] [RE:196699] [DI:direct] >gp:[GI:d1012379:g1783235] [LN:D83026] [AC:D83026:D45911] [GN:pepT] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence covering lic-cel region.] [NT:highly homologous to tripeptidases (peptidase T)] [LE:27766] [RE:28998] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24650427_f2_349 3481 7253 330 109 331 6.2e−30 Description pir:[LN:C69772] [AC:C69772] [PN:thioredoxin homolog ydbP] [GN:ydbP] [CL:thioredoxin:thioredoxin homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1020045:g1881265] [LN:AB001488] [AC:AB001488] [GN:ydbP] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence, 148 kb sequence of the region between 35 and 47 degree.] [NT:PROBABLE THIOREDOXIN.] [LE:40816] [RE:41136] [DI:complement] >gp:[GI:e1182421:g2632755] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ydbP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21): from 402751 to 611850.] [NT:similar to thioredoxin] [LE:104560] [RE:104880] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24650462_c1_944 3482 7254 1515 504 848 1.0e−84 Description pir:[LN:G70008] [AC:G70008] [PN:NADH dehydrogenase (ubiquinone) homolog yufD] [GN:yufD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184241:g2635659] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yufD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to NADH dehydrogenase (ubiquinone)] [LE:51840] [RE:53282] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24664840_c2_1203 3483 7255 1968 655 1694 2.3e−174 Description pir:[LN:H69626] [AC:H69626] [PN:PTS fructose-specific enzyme IIBC component fruA] [GN:fruA] [CL:phosphotransferase system enzyme II, fructose-specific:phosphotransferase system mannitol-specific enzyme II factor III homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185030:g2633811] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:phosphotransferase system (PTS)] [GN:fruA] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21): from 1394791 to 1603020.] [LE:113871] [RE:115778] [DI:direct] >gp:[GI:g3282125] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:fructose PTS IIABC] [GN:fruA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to fructose-specific PTS system IIBC] [LE:14359] [RE:16266] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24796927_f1_61 3484 7256 789 262 325 2.7e−29 Description pir:[LN:E69883] [AC:E69883] [PN:phage-related replication protein homolog ymaC] [GN:ymaC] [CL:phage-related replication protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183386:g2634111] [LN:BSUB0010] [AC:Z99113:AL009126] [GN:ymaC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 10 of 21): from 1781201 to 2014980.] [NT:similar to phage-related protein] [LE:81490] [RE:82197] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24803125_c1_993 3485 7257 978 325 982 6.5e−99 Description sp:[LN:MDH_BACIS] [AC:Q59202] [GN:MDH] [OR:BACILLUS ISRAELI] [EC:1.1.1.37] [DE:MALATE DEHYDROGENASE,] [SP:Q59202] [DB:swissprot] >pir:[LN:S61213] [AC:S61213] [PN:malate dehydrogenase,] [CL:L-lactate dehydrogenase] [OR:Bacillus israeli] [EC:1.1.1.37] [DB:pir2] >gp:[GI:g963019] [LN:BIDNAMD] [AC:X90527] [PN:malate dehydrogenase] [OR:Bacillus israeli] [DB:genpept-bct1] [EC:1.1.1.37] [DE:B. israeli DNA for malate dehydrogenase gene.] [SP:Q59202] [LE:291] [RE:1229] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_24803332_c2_1305 3486 7258 840 279 712 2.6e−70 Description pir:[LN:B70020] [AC:B70020] [PN:conserved hypothetical protein yusA] [GN:yusA] [CL:lipoprotein-28] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184351:g2635769] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:163826] [RE:164650] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2531500_c3_1360 3487 7259 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25401377_c1_1045 3488 7260 852 283 939 2.3e−94 Description gp:[GI:e1330454:g3724157] [LN:SAA005352] [AC:AJ005352] [PN:ATP binding protein] [GN:SstC] [FN:iron transport] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus, Sst putative iron transport operon.] [LE:2186] [RE:2947] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25401675_c2_1319 3489 7261 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25415802_c1_1102 3490 7262 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25473782_c3_1498 3491 7263 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25492312_f1_302 3492 7264 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25572180_c1_956 3493 7265 1272 423 895 1.1e−89 Description sp:[LN:YXJA_BACSU] [AC:P42312] [GN:YXJA:N15HR] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 43.7 KD PROTEIN IN KATB 3′REGION] [SP:P42312] [DB:swissprot] >pir:[LN:G70078] [AC:G70078] [PN:pyrimidine nucleoside transport homolog yxjA] [GN:yxjA] [CL:pyrimidine nucleoside transport protein nupC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186401:g2636437] [LN:BSUB0020] [AC:Z99123:AL009126] [GN:yxjA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [NT:similar to pyrimidine nucleoside transport] [SP:P42312] [LE:206141] [RE:207334] [DI:direct] >gp:[GI:e1184627:g2636448] [LN:BSUB0021] [AC:Z99124:AL009126] [GN:yxjA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 21 of 21):from 3999281 to 4214814.] [NT:similar to pyrimidine nucleoside transport] [SP:P42312] [LE:5261] [RE:6454] [DI:direct] >gp:[GI:d1012369:g665999] [LN:D83026] [AC:D83026:D45911] [GN:yxjA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:BGSC 1A1) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome sequence covering lic-cel region.] [NT:homologous to pyrimidine nucleoside transport] [LE:17131] [RE:18324] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25585891_c2_1218 3494 7266 1980 659 1949 2.2e−201 Description pir:[LN:D69815] [AC:D69815] [PN:conserved hypothetical protein yfnI] [GN:yfnI] [CL:Bacillus subtilis probable anion-binding protein yflE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182705:g2633039] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yfnI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21): from 600701 to 813890.] [NT:alternate gene name:yetP; similar to hypothetical] [LE:195080] [RE:197041] [DI:direct] >gp:[GI:d1020933:g2116767] [LN:D86418] [AC:D86418] [PN:YfnI] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:AC327) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genomic DNA 69–70 degree region, partial sequence.] [LE:16150] [RE:18111] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_25806300_f1_275 3495 7267 750 249 1270 2.0e−129 Description gp:[GI:e255626:g1617428] [LN:SEABCTS] [AC:X99127] [PN:ATP binding protein] [FN:iron repressible ABC transport system] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis gene encoding ABC transport system.] [LE:41] [RE:787] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26171927_c2_1246 3496 7268 342 113 221 2.8e−18 Description sp:[LN:YTXJ_BACSU] [AC:P39914] [GN:YTXJ] [OR:BACILLUS SUBTILIS] [DE:(ORF3)] [SP:P39914] [DB:swissprot] >pir:[LN:S21420] [AC:S21420:F70003:S71003] [PN:general stress protein homolog ytxJ] [GN:ytxJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g39815] [LN:BSAROAG] [AC:X65945] [GN:orf 2] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis aroA-aroG gene.] [SP:P39914] [LE:105] [RE:431] [DI:direct] >gp:[GI:e1185849:g2635460] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytxJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:alternate gene name:csb40; similar to general] [SP:P39914] [LE:48061] [RE:48387] [DI:complement] >gp:[GI:g2293219] [LN:AF008220] [AC:AF008220] [PN:YtxJ] [GN:ytxJ] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:132039] [RE:132365] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26176693_f2_482 3497 7269 828 275 685 1.9e−67 Description pir:[LN:A69162] [AC:A69162] [PN:gufA protein homolog MTH473] [GN:MTH473] [CL:gufA protein] [OR:Methanobacterium thermoautotrophicum] [DB:pir2] >gp:[GI:g2621542] [LN:AE000831] [AC:AE000831:AE000666] [PN:conserved protein] [GN:MTH473] [OR:Methanobacterium thermoautotrophicum] [DB:genpept-bct1] [DE:Methanobacterium thermoautotrophicum from bases 404817 to 415582 (section 37 of 148) of the complete genome.] [NT:Function Code:14.01 - Unknown, Conserved protein;] [LE:9769] [RE:10548] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2618827_c1_1042 3498 7270 288 95 75 0.023 Description sp:[LN:LUXY_VIBFI] [AC:P21578] [GN:LUXY] [OR:VIBRIO FISCHERI] [DE:YELLOW FLUORESCENT PROTEIN (YFP)] [SP:P21578] [DB:swissprot] >pir:[LN:A36037] [AC:A36037:A39946] [PN:yellow fluorescent protein:luxY protein] [GN:luxY] [CL:riboflavin synthase alpha chain] [OR:Vibrio fischeri] [DB:pir2] >gp:[GI:g155235] [LN:VIBLUXY] [AC:M60852] [PN:yellow fluorescent protein] [GN:luxY] [OR:Vibrio fischeri] [SR:V. fischeri (strain Y-1) DNA] [DB:genpept-bct1] [DE:Vibrio fischeri yellow fluorescent protein (luxY) gene, completecds.] [LE:45] [RE:629] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26190785_c2_1306 3499 7271 1287 428 1408 4.7e−144 Description pir:[LN:F70019] [AC:F70019] [PN:NifS protein homolog homolog yurW] [GN:yurW] [CL:nifS protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184347:g2635765] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yurW] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to NifS protein homolog] [LE:159503] [RE:160723] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26204837_f1_69 3500 7272 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26211552_c2_1270 3501 7273 984 327 1034 2.0e−104 Description pir:[LN:B70032] [AC:B70032] [PN:conserved hypothetical protein yvcL] [GN:yvcL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186163:g2635988] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvcL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:169083] [RE:170033] [DI:complement] >gp:[GI:e313028:g1945652] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] EGN:yvcL] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:similar to Y103_MYCGE hypothetical protein mg103] [LE:11638] [RE:12588] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26259638_f1_134 3502 7274 765 254 176 2.2e−11 Description pir:[LN:B70798] [AC:B70798 ] [PN:probable membrane protein] [GN:Rv3737] [OR:Mycobacterium tuberculosis] [DB:pir2] >gp:[GI:e1264597:g2960161] [LN:MTV025] [AC:AL022121:AL123456] [PN:hypothetical protein Rv3737] [GN:Rv3737] [OR:Mycobacterium tuberculosis] [DB:genpept-bct1] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 155/162.] [NT:Rv3737, (MTV025.085), len:529. Probable membrane] [LE:94796] [RE:96385] [DI:direct] >gp:[GI:e1264597:g2960161] [LN:MTV025] [AC:AL022121:AL123456] [PN:hypothetical protein Rv3737] [GN:Rv3737] [OR:Mycobacterium tuberculosis] [DB:genpept] [DE:Mycobacterium tuberculosis H37Rv complete genome; segment 155/162.] [NT:Rv3737, (MTV025.085), len:529. Probable membrane] [LE:94796] [RE:96385] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26359805_f1_11 3503 7275 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26360663_c3_1530 3504 7276 1308 435 1039 5.9e−105 Description pir:[LN:A70015] [AC:A70015] [PN:NADH dehydrogenase homolog yumB] [GN:yumB] [CL:NADH dehydrogenase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184289:g2635707] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yumB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to NADH dehydrogenase] [LE:102091] [RE:103311] [DI:complement] >gp:[GI:e311467:g1934829] [LN:BSZ93939] [AC:Z93939] [PN:NADH dehydrogenase] [GN:yumB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment from yumA to yulF.] [NT:putative; unknown] [LE:528] [RE:1748] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26367175_c3_1476 3505 7277 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26376077_c1_1113 3506 7278 192 63 101 1.5e−05 Description pir:[LN:C70063] [AC:C70063] [PN:hypothetical protein ywmG] [GN:ywmG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e276829:g1648859] [LN:BSATPC] [AC:Z81356] [PN:unknown] [GN:ywmH] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis atpC gene.] [LE:10910] [RE:11098] [DI:direct] >gp:[GI:e1184573:g2636192] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywmG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [LE:172069] [RE:172257] [DI:complement] >gp:[GI:e1184573:g2636192] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:ywmG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [LE:172069] [RE:172257] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26464707_c3_1493 3507 7279 141 46 43 0.039 Description pir:[LN:S58357] [AC:S66652:S58357] [PN:pepI protein] [GN:pepI] [OR:Staphylococcus epidermidis] [DB:pir2] >gp:[GI:g945016] [LN:SEPEPGNS] [AC:Z49865] [PN:PepI] [GN:pepI] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis pepA, pepB, pepC, pepI, pepP and pepT genes.] [LE:2028] [RE:2237] [DI:direct] >gp:[GI:g398082] [LN:STAPEPA] [AC:L23967] [PN:immunity protein] [GN:pepI] [OR:Staphylococcus epidermidis] [SR:Staphylococcus epidermidis DNA] [DB:genpept-bct1] [DE:Staphylococcus epidermidis lantibiotic (pepA) and immunity protein (pepI) gene, complete cds.] [LE:377] [RE:586] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26578577_c1_1065 3508 7280 1791 596 2276 1.8e−238 Description sp:[LN:UVRA_BACSU] [AC:O34863] [GN:UVRA] [OR:BACILLUS SUBTILIS] [DE:EXCINUCLEASE ABC SUBUNIT A] [SP:O34863] [DB:swissprot] >pir:[LN:F69729] [AC:F69729] [PN:excinuclease ABC chain A:excision endonuclease ABC,, chain A:uvrA protein] [GN:uvrA] [CL:excinuclease ABC chain A:ATP-binding cassette homology] [OR:Bacillus subtilis] [EC:3.1.—.—] [DB:pir2] >gp:[GI:e1184422:g2636042] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:excinuclease ABC (subunit A)] [GN:uvrA] [FN:excision of ultraviolet light-induced] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:O34863] [LE:12034] [RE:14907] [DI:complement] >gp:[GI:g2618842] [LN:AF017113] [AC:AF017113] [PN:excinuclease ABC subunit A] [GN:uvrA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:15386] [RE:18259] [DI:direct] >gp:[GI:e1184422:g2636042] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:excinuclease ABC (subunit A)] [GN:uvrA] [FN:excision of ultraviolet light-induced] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:O34863] [LE:12034] [RE:14907] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26594050_c3_1524 3509 7281 243 80 378 6.5e−35 Description gp:[GI:d1013748:g1405337] [LN:D86240] [AC:D86240] [PN:D-alanyl carrier protein] [GN:dltC] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (isolate:KAN9G) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus gene for unknown function and dlt operon dltA, dltB, dltC and dltD genes, complete cds.] [NT:Sequence homologous to the dltC genes of] [LE:5303] [RE:5539] [DI:direct] >gp:[GI:g4530243] [LN:AF101234] [AC:AF101234] [PN:D-alanine carrier protein DltC] [GN:dltC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus dltABCD operon, complete sequence; and unknown gene.] [LE:4276] [RE:4512] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26735877_c3_1508 3510 7282 402 133 446 4.1e−42 Description pir:[LN:A70021] [AC:A70021] [PN:glycine cleavage system protein H homolog yusH] [GN:yusH] [CL:glycine cleavage system protein H: lipoyl/biotin-binding homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184358:g2635776] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusH] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to glycine cleavage system protein H] [LE:168182] [RE:168565] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26753150_f1_147 3511 7283 336 111 295 4.1e−26 Description sp:[LN:YKI4_YEAST] [AC:P36078] [GN:YKL084W] [OR:SACCHAROMYCES CEREVISIAE] [SR:,BAKER'S YEAST] [DE:HYPOTHETICAL 13.6 KD PROTEIN IN MDH1-VMA5 INTERGENIC REGION] [SP:P36078] [DB:swissprot] >pir:[LN:S37909] [AC:S37909] [PN:hypothetical protein YKL084w] [OR:Saccharomyces cerevisiae] [DB:pir2] [MP:11L] >gp:[GI:g486123] [LN:SCYKL084W] [AC:Z28084:Y13137] [OR:Saccharomyces cerevisiae] [SR:baker's yeast] [DB:genpept-pln1] [DE:S. cerevisiae chromosome XI reading frame ORF YKL084w.] [NT:ORF YKL084w] [SP:P36078] [LE:382] [RE:732] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26757807_f2_578 3512 7284 951 316 1619 2.0e−166 Description gp:[GI:e255529:g1617430] [LN:SEABCTS] [AC:X99127] [PN:lipoprotein] [FN:iron repressible ABC transport system] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis gene encoding ABC transport system.] [LE:1621] [RE:2550] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26834387_f1_234 3513 7285 711 236 115 1.2e−06 Description gp:[GI:g3043880] [LN:LLU95841] [AC:U95841] [PN:transmembrane protein Tmp6] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis transmembrane protein Tmp6 gene, partial cds.] [NT:identified as a fusion to a signal peptide-less] [LE:<1] [RE:354] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_26839462_c3_1474 3514 7286 1011 336 817 2.0e−81 Description sp:[LN:YVCK_BACSU] [AC:O06974] [GN:YVCK] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 34.7 KD PROTEIN IN CRH-TRXB INTERGENIC REGION] [SP:O06974] [DB:swissprot] >gp:[GI:e313027:g1945651] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvcK] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:similar to hypothetical SYCSLRA] [SP:O06974] [LE:10662] [RE:11615] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2752262_c3_1426 3515 7287 1014 337 652 6.0e−64 Description pir:[LN:G69669] [AC:G69669] [PN:choline ABC transporter (ATP-binding protein) opuBA] [GN:opuBA] [CL:glycine betaine/proline transport protein proV:ATP-binding cassette homology:CBS homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186061:g2635886] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:choline ABC transporter (ATP-binding protein)] [GN:opuBA] [FN:high affinity transport of choline] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:proV] [LE:61618] [RE:62763] [DI:complement] >gp:[GI:g2293447] [LN:AF008930] [AC:AF008930] [PN:ATPase] [GN:opuBA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis choline transport system including ATPase (opuBA), transmembrane protein (opuBB), choline binding protein precursor (opuBC) and transmembrane protein (opuBD) genes, complete cds; and unknown gene.] [NT:OpuBA; part of choline uptake system] [LE:881] [RE:2026] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_275268_c2_1225 3516 7288 1125 374 766 5.0e−76 Description sp:[LN:HIS8_BACSU] [AC:P17731:O32008] [GN:HISC:HISH] [OR:BACILLUS SUBTILIS] [EC:2.E.1.9] [DE:PHOSPHATE TRANSAMINASE)] [SP:P17731:O32008] [DB:swissprot] >pir:[LN:A26532] [AC:A26532:G22794:H69640] [PN:histidinol-phosphate transaminase, / tyrosine and phenylalanine aminotransferase hisC:histidinol-phosphate aminotransferase] [GN:hisC:hisH] [CL:probable histidinol-phosphate transaminase] [OR:Bacillus subtilis] [EC:2.6.1.9] [DB:pir2] [MP:205 (degrees)] >gp:[GI:g143814] [LN:BACVARGNS] [AC:M80245:M15409] [PN:HisH] [GN:hisH] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:B. subtilis dbpA, mtr(A,B), gerC(1–3), ndk, cheR, aro(B,E,F,H), trp(A–F), hisH, and tyrA genes, complete cds.] [LE:14250] [RE:15332] [DI:direct] >gp:[GI:e1183707:g2634680] [LN:BSUB0012] [AC:Z99115:AL009126] [PN:tyrosine/phenylalanine aminotransferase] [GN:hisC] [FN:histidine biosynthesis] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.6.1.9:2.6.1.5] [DE:Bacillus subtilis complete genome (section 12 of 21):from 2195541 to 2409220.] [NT:alternate gene name:aroJ; histidinol-phosphate] [SP:P17731] [LE:174116] [RE:175198] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2917200_f1_277 3517 7289 192 63 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2926425_f2_465 3518 7290 960 319 456 3.5e−43 Description sp:[LN:BMRU_BACSU] [AC:P39074] [GN:BMRU] [OR:BACILLUS SUBTILIS] [DE:BMRU PROTEIN] [SP:P39074] [DB:swissprot] >pir:[LN:F69595] [AC:F69595] [PN:multidrug resistance protein cotranscribed with bmr bmrU] [GN:bmrU] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g409286] [LN:BACBMRURBE] [AC:L25604] [GN:bmrU] [FN:unknown, but cotranscribed with bmr] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis bmrU, multidrug efflux transporter (bmr) and its regulator (bmrR) genes, complete cds, and branched-chain 2-oxo acid dehydrogenase (bfmB) gene, 3 end.] [LE:227] [RE:1120] [DI:direct] >gp:[GI:d1013282:g1303947] [LN:BACJH642] [AC:D84432:D82370] [PN:BmrU] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:JH642(trpC2 PheAl)) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, 283 Kb region containing skin element.] [LE:225092] [RE:225985] [DI:complement] >gp:[GI:e1185668:g2634834] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:multidrug resistance protein] [GN:bmrU] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21):from 2395261 to 2613730.] [SP:P39074] [LE:97634] [RE:98527] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_2929517_c3_1399 3519 7291 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_29376503_f2_504 3520 7292 246 81 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_29378425_f3_790 3521 7293 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_29501510_c1_950 3522 7294 1125 374 432 1.2e−40 Description sp:[LN:TAGB_BACSU] [AC:P27621] [GN:TAGB] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID BIOSYNTHESIS PROTEIN B PRECURSOR] [SP:P27621] [DB:swissprot] >pir:[LN:C49757] [AC:C49757:C69720] [PN:polyglycerol phosphate techoic acid biosynthesis protein tagB] [GN:tagB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g143725] [LN:BACTAGABCD] [AC:M57497] [GN:tagB] [OR:Bacillus subtilis] [SR:B. subtilis (strain 168) DNA] [DB:genpept-bct1] [DE:B. subtilis tagA, tagB, tagC and tagD genes, complete cds.] [NT:putative] [LE:1603] [RE:2748] [DI:direct] >gp:[GI:e1184482:g2636102] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:tagB] [FN:polyglycerol phosphate assembly and export] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P27621] [LE:84143] [RE:85288] [DI:direct] >gp:[GI:e1184482:g2636102] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:tagB] [FN:polyglycerol phosphate assembly and export] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P27621] [LE:84143] [RE:85288] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_29570877_c3_1414 3523 7295 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3001313_c2_1262 3524 7296 681 226 154 3.6e−11 Description pir:[LN:A65001] [AC:A65001] [PN:hypothetical protein b2291] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g1788628] [LN:AE000318] [AC:AE000318:U00096] [PN:putative alpha helix protein] [GN:b2291] [FN:phenotype; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 208 of 400 of the complete genome.] [NT:o199] [LE:4988] [RE:5587] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30198587_f3_629 3525 7297 258 85 306 2.8e−27 Description pir:[LN:C70024] [AC:C70024] [PN:NifU protein homolog homolog yutI] [GN:yutI] [CL:conserved hypothetical nifU-like protein HP1492] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184301:g2635719] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yutI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to NifU protein homolog] [LE:112444] [RE:112779] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30265692_c3_1521 3526 7298 1050 349 1070 3.1e−108 Description gp:[GI:g4530240] [LN:AF101234] [AC:AF101234] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus dltABCD operon, complete sequence; and unknown gene.] [NT:Orf1; similar to hydroxyacid dehydrogenases] [LE:51] [RE:1010] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30272661_f1_265 3527 7299 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30491275_c1_961 3528 7300 1104 367 391 2.7e−36 Description pir:[LN:H69867] [AC:H69867] [PN:conserved hypothetical protein ykvI] [GN:ykvI] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184961:g2633742] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins from B. subtilis] [LE:42768] [RE:43811] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30601588_c3_1356 3529 7301 834 277 561 2.6e−54 Description sp:[LN:TAGG_BACSU] [AC:P42953] [GN:TAGG] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID TRANSLOCATION PERMEASE PROTEIN TAGG] [SP:P42953] [DB:swissprot] >pir:[LN:S69202] [AC:S69202:H69720] [PN:teichoic acid permease tagG:integral membrane protein tagG] [GN:tagG] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g755152] [LN:BSU13832] [AC:U13832] [PN:highly hydrophobic integral membrane protein] [GN:tagG] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 highly hydrophobic integral membrane protein(tagG) gene and ATP-binding protein (tagH) gene, complete cds.] [LE:287] [RE:1114] [DI:direct] >gp:[GI:e1184477:g2636097] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:permease] [GN:tagG] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P42953] [LE:77137] [RE:77964] [DI:complement] >gp:[GI:e1184477:g2636097] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:permease] [GN:tagG] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P42953] [LE:77137] [RE:77964] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30661260_c1_1080 3530 7302 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_30745328_c1_1103 3531 7303 606 201 200 4.8e−16 Description pir:[LN:S56619] [AC:S56619:B65255] [PN:gpmB protein:hypothetical protein o215b] [GN:gpmB] [CL:phosphoglycerate mutase homology] [OR:Escherichia coli] [DB:pir2] >gp:[GI:g537235] [LN:ECOUW93] [AC:U14003] [OR:Escherichia coli] [DB:genpept-bct1] [DE:Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes.] [NT:Kenn Rudd identifies as gpmB] [LE:324630] [RE:325277] [DI:direct] >gp:[GI:g1790856] [LN:AE000509] [AC:AE000509:U00096] [PN:phosphoglyceromutase 2] [GN:gpmB] [FN:enzyme; Energy metabolism, carbon: Glycolysis] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 399 of 400 of the complete genome.] [LE:8985] [RE:9632] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31257943_c2_1156 3532 7304 414 137 669 9.5e−66 Description gp:[GI:g1913907] [LN:SAU91741] [AC:U91741] [PN:TagD] [GN:tagD] [FN:teichoic acid biosynthesis] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus teichoic acid biosynthesis TagB gene, partial cds and TagX and TagD genes, complete cds.] [NT:similar to Bacillus subtilis TagD] [LE:1534] [RE:1932] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31267503_c2_1168 3533 7305 813 270 784 6.2e−78 Description pir:[LN:A70001] [AC:A70001] [PN:ABC transporter (ATP-binding protein) homolog ytsC] [GN:ytsC] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185911:g2635522] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21): from 2997771 to 3213410.] [NT:similar to ABC transporter (ATP-binding protein)] [LE:112638] [RE:113399] [DI:complement] >gp:[GI:g2293177] [LN:AF008220] [AC:AF008220] [PN:transporter] [GN:ytsC] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [LE:67028] [RE:67789] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31289687_c1_1051 3534 7306 681 226 132 5.1e−06 Description gp:[GI:g4894306] [LN:AF065404] [AC:AF065404] [PN:pXO1-90] [OR:Bacillus anthracis] [DB:genpept-bct2] [DE:Bacillus anthracis virulence plasmid PX01, complete sequence.] [LE:106772] [RE:108730] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31428188_f2_401 3535 7307 222 73 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31578_c2_1265 3536 7308 537 178 463 5.4e−44 Description pir:[LN:H70044] [AC:H70044] [PN:O-acetyltransferase homolog yvoF] [GN:yvoF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186184:g2636009] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvoF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to O-acetyltransferase] [LE:190798] [RE:191316] [DI:complement] >gp:[GI:g2618861] [LN:AF017113] [AC:AF017113] [PN:putative acetyltransferase] [GN:yvoF] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:36517] [RE:37035] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31803377_f3_884 3537 7309 612 203 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_31876563_c1_1124 3538 7310 1239 412 1924 9.7e−199 Description gp:[GI:d1013747:g1405336] [LN:D86240] [AC:D86240] [PN:hypothethecal membrane transporter] [GN:dltB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (isolate:KAN96) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus gene for unknown function and dlt operon dltA, dltB, dltC and dltD genes, complete cds.] [NT:Sequence homologous to the dltB genes of] [LE:4071] [RE:5285] [DI:direct] >gp:GI:g4530242] [LN:AF101234] [AC:AF101234] [PN:putative membrane protein DltB] [GN:dltB] [FN:involved in D-alanine transfer into teichoic] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus dltABCD operon, complete sequence; and unknown gene.] [LE:3044] [RE:4258] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_32062553_c1_943 3539 7311 468 155 354 2.3e−32 Description pir:[LN:S61393] [AC:561393] [PN:hypothetical protein 2] [OR:Bacillus sp.] [SR:strain C-125, , strain C-125] [SR:strain C-125,] [DB:pir2] >gp:[GI:d1007182:g854656] [LN:BACAPS] [AC:D31823] [PN:ORF2] [OR:Bacillus sp.] [SR:Bacillus sp. (strain:C-125) DNA] [DB:genpept-bct1] [DE:Bacillus sp. Na+/H+ antiporter system responsible genes.] [NT:Na+/H+ antiporter system responsible gene] [LE:2669] [RE:3109] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_32070827_f3_789 3540 7312 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_32212902_c2_1135 3541 7313 1035 344 468 1.9e−44 Description pir:[LN:F70046] [AC:F70046] [PN:iron permease homolog yvrB] [GN:yvrB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249808:g2832812] [LN:BS43KBDNA] [AC:AJ223978] [PN:putative hemin permease, YvrB] [GN:yvrB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7 kB DNA fragment from yvsA to yvqA.] [LE:24699] [RE:25760] [DI:direct] >gp:[GI:e1184396:g2635814] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yvrB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to iron permease] [LE:204527] [RE:205588] [DI:complement] >gp:[GI:e1186005:g2635830] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvrB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to iron permease] [LE:1977] [RE:3038] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_32225012_f1_54 3542 7314 498 165 276 4.2e−24 Description pir:[LN:F69870] [AC:F69870] [PN:general stress protein homolog ykzA] [GN:ykzA] [CL:hypothetical protein yklA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181516:g2632036] [LN:BSAJ2571] [AC:AJ002571] [PN:YknA] [GN:yknA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [NT:homologous to OsmC from Escherichia coli] [LE:34145] [RE:34555] [DI:direct] >gp:[GI:e1183336:g2633670] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykzA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:alternate gene name:yzzE; similar to general] [LE:187094] [RE:187504] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_32475037_f3_651 3543 7315 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_32611068_c1_927 3544 7316 1674 557 1694 2.3e−174 Description sp:[LN:SYR_BACSU] [AC:P46906] [GN:ARGS] [OR:BACILLUS SUBTILIS] [EC:6.1.1.19] [DE:ARGINYL-TRNA SYNTHETASE, (ARGININE--TRNA LIGASE) (ARGRS)] [SP:P46906] [DB:swissprot] >pir:[LN:E69589] [AC:E69589:S60082] [PN:arginine--tRNA ligase, argS:arginyl-tRNA synthetase] [GN:argS] [CL:Bacillus arginine--tRNA ligase] [OR:Bacillus subtilis] [EC:6.1.1.19] [DB:pir2] >gp:[GI:e1186234:g2636270] [LN:BSUB0020] [AC:Z99123:AL009126] [PN:arginyl-tRNA synthetase] [GN:argS] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:6.1.1.19] [DE:Bacillus subtilis complete genome (section 20 of 21):from 3798401 to 4010550.] [SP:P46906] [LE:34303] [RE:35973] [DI:complement] >gp:[GI:e324388:g2224756] [LN:B5Z97024] [AC:Z97024] [PN:arginyl tRNA synthetase] [GN:argS] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis ywiA, sbo, ywiB, argS and narK genes.] [SP:P46906] [LE:1680] [RE:3350] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_33210952_f2_370 3545 7317 234 77 93 0.0025 Description gp:[GI:g3859891] [LN:AF072678] [AC:AF072678] [PN:alpha-actinin] [GN:AACTI] [OR:Trichomonas vaginalis] [DB:genpept-inv2] [DE:Trichomonas vaginalis alpha-actinin (AACTI) mRNA, complete cds.] [NT:actin binding protein] [LE:247] [RE:3042] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_33239001_f2_356 3546 7318 276 91 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_33304063_f1_151 3547 7319 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_33414143_c3_1395 3548 7320 1710 569 619 1.9e−60 Description gp:[GI:g2773332] [LN:AF040718] [AC:AF040718] [PN:ABC transporter CydC] [GN:cydC] [OR:Shigella flexneri] [DB:genpept-bct2] [DE:Shigella flexneri ABC transporter CydC (cydC) gene, complete cds.] [NT:similar to E. coli CydC] [LE:1648] [RE:3369] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_33628441_f3_645 3549 7321 255 84 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_33645967_f1_18 3550 7322 282 93 73 0.019 Description gp:[GI:g2444074] [LN:CPU88070] [AC:U88070] [GN:scc1] [FN:putative chaperone of type III secretory] [OR:Chlamydophila caviae] [DB:genpept-bct2] [DE:Chlamydophila caviae cds1, cds2, copN and scc1 genes, complete cds.] [NT:similar to SycE of Yersinia] [LE:4766] [RE:5206] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34069680_c1_1125 3551 7323 213 70 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34160625_c3_1368 3552 7324 438 145 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34173262_c3_1497 3553 7325 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34173385_c1_975 3554 7326 621 206 151 7.4e−11 Description pir:[LN:E71040] [AC:E71040] [PN:hypothetical protein PH1613] [GN:PH1613] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1031668:g3258042] [LN:AP000006] [AC:AP000006:AB005215:AB009510:AB009511:AB009512:AB009513:AB009514] [PN:166aa long hypothetical protein] [GN:PH1613] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA, clone:Pyrococcus horikoshi] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 1166001-1485000 nt. position(6/7).] [LE:263709] [RE:264209] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34173750_c3_1485 3555 7327 480 159 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34176550_f1_24 3556 7328 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34189817_c1_945 3557 7329 2052 683 888 5.9e−89 Description pir:[LN:E70040] [AC:E70040] [PN:conserved hypothetical protein yvgP] [GN:yvgP] [CL:hypothetical protein yvgP] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186030:g2635855] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvgP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:27843] [RE:29855] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3424162_c3_1511 3558 7330 489 162 529 6.5e−51 Description pir:[LN:E70019] [AC:E70019] [PN:NifU protein homolog homolog yurV] [GN:yurV] [CL:Yeast nitrogen fixation protein:nitrogen fixation protein homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184346:g2635764] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yurV] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to NifU protein homolog] [LE:159070] [RE:159513] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34251887_c2_1322 3559 7331 1266 421 1649 1.3e−169 Description gp:[GI:g4530244] [LN:AF101234] [AC:AF101234] [PN:putative exoprotein DltD] [GN:dltD] [FN:involved in D-alanine transfer into teichoic] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus dltABCD operon, complete sequence; and unknown gene.] [LE:4509] [RE:5684] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34254581_c1_954 3560 7332 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34261088_c3_1387 3561 7333 312 103 75 0.018 Description gp:[GI:g488925] [LN:A13473] [AC:A13473] [PN:41 kd antigen] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-pat] [DE:P. falciparum gene for 41 kd antigen, clone 41-14.] [LE:<1] [RE:>532] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34562762_c3_1336 3562 7334 750 249 230 3.2e−19 Description pir:[LN:D71157] [AC:D71157] [PN:hypothetical protein PH0459] [GN:PH0459] [OR:Pyrococcus horikoshii] [DB:pir2] >gp:[GI:d1030488:g3256862] [LN:AP000002] [AC:AP000002:AB009475:AB009476:AB009477:AB009478:AB009479:AB009480] [PN:232aa long hypothetical protein] [GN:PH0459] [OR:Pyrococcus horikoshii] [SR:Pyrococcus horikoshii (strain:OT3) DNA] [DB:genpept-bct1] [DE:Pyrococcus horikoshii OT3 genomic DNA, 287001-544000 nt. position(2/7).] [LE:132975] [RE:133673] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34571000_f1_163 3563 7335 537 178 393 1.7e−35 Description sp:[LN:ADH2_ENTHI] [AC:Q24803:Q27649] [GN:ADH2] [OR:ENTAMOEBA HISTOLYTICA] [EC:1.1.1.1:1.2.1.10] [DE:DEHYDROGENASE, (ACDH)] [SP:Q24803:Q27649] [DB:swissprot] >gp:[GI:g488430] [LN:EHU04863] [AC:U04863] [PN:alcohol dehydrogenase 2] [OR:Entamoeba histolytica] [DB:genpept-inv1] [DE:Entamoeba histolytica HM1:IMSS alcohol dehydrogenase 2 (EhADH2)mRNA, complete cds.] [NT:The derived amino acid sequence of EhADH2 is] [LE:3] [RE:2615] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34589027_c2_1197 3564 7336 315 104 98 0.00023 Description sp:[LN:Y420_METJA] [AC:Q57863] [GN:MJ0420] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ0420] [SP:Q57863] [DB:swissprot] >pir:[LN:D64352] [AC:D64352] [PN:hypothetical protein MJ0420] [OR:Methanococcus jannaschii] [DB:pir2] [MP:FOR378394-379536] >gp:[GI:g1591123] [LN:U67494] [AC:U67494:L77117] [PN:O-antigen polymerase isolog] [GN:MJ0420] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 36 of 150 of the complete genome.] [NT:similar to GB:M60066 SP:P26479 PID:154343 percent] [LE:1855] [RE:2997] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34612887_f2_512 3565 7337 465 154 260 2.1e−22 Description pir:[LN:E69857] [AC:E69857] [PN:conserved hypothetical protein ykmA] [GN:ykmA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181515:g2632035] [LN:BSAJ2571] [AC:AJ002571] [PN:YkmA] [GN:ykmA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:33559] [RE:34002] [DI:complement] >gp:[GI:e1183335:g2633669] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykmA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to hypothetical proteins] [LE:186508] [RE:186951] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34627136_f3_681 3566 7338 306 101 73 0.014 Description pir:[LN:S36690] [AC:S36690] [PN:hypothetical protein] [OR:Autographa californica nuclear polyhedrosis virus:AcMNPV] [DB:pir2] >gp:[GI:g296321] [LN:ACNPVDNA] [AC:X71415] [GN:ORF 339] [OR:Autographa californica nucleopolyhedrovirus] [DB:genpept-vrl] [DE:Autographa californica nuclear polyhedrosis virus DNA.] [SP:Q06669] [LE:<1] [RE:339] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34641875_c3_1406 3567 7339 939 312 704 1.9e−69 Description pir:[LN:A69627] [AC:A69627] [PN:fructose 1-phosphate kinase fruB] [GN:fruB] [CL:6-phosphofructokinase 2] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185029:g2633810] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:fructose-1-phosphate kinase] [GN:fruB] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:2.7.1.56] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [LE:112945] [RE:113856] [DI:direct] >gp:[GI:g3282124] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:fructose-1-phosphate kinase] [GN:fruB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to L. lactis tagatose-6-phosphate kinase,] [LE:13433] [RE:14344] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34642567_c1_1089 3568 7340 2406 801 2175 1.0e−228 Description pir:[LN:G70027] [AC:G70027] [PN:conserved hypothetical protein yvaJ] [GN:yvaJ] [CL:virulence-associated protein vacB homolog] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186049:g2635874] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvaJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:51375] [RE:53714] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_34645311_f3_867 3569 7341 525 174 186 1.4e−14 Description gp:[GI:g4981094] [LN:AE001732] [AC:AE001732:AE000512] [PN:conserved hypothetical protein] [GN:TM0577] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 44 of 136 of the complete genome.] [NT:similar to SP:P46854 PID:606376 GB:U00096] [LE:9820] [RE:10359] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3518_f2_375 3570 7342 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_35422880_c2_1228 3571 7343 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_35444127_f2_443 3572 7344 663 220 514 2.5e−49 Description sp:[LN:YVYE_BACSU] [AC:P32437:P96500] [GN:YVYE:YVHK] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 24.8 KD PROTEIN IN DEGS-TAGO INTERGENIC REGION] [SP:P32437:P96500] [DB:swissprot] >pir:[LN:A70049] [AC:A70049:A30191] [PN:conserved hypothetical protein yvyE] [GN:yvyE] [CL:hypothetical protein HI0722] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184457:g2636077] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvyE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:yvhK; similar to hypothetical] [SP:P32437] [LE:48723] [RE:49376] [DI:direct] >gp:[GI:g1762328] [LN:BSU56901] [AC:U56901] [PN:Ycr59c/YigZ homolog] [GN:yvhK] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis putative transcriptional regulator (yvhJ), Ycr59c/YigZ homolog (yvhK), histidine kinase (degS), transcriptional regulator of degradation enzyme (degU), (degV), (comFA), (comFB), (comFC), flagellar protein (yviB), negative regulator of flagellin (flgM), flagellar protein (yviC), flagellar-hook associated protein1 (flgK), flagellar-hook associated protein 3 (flgL), (yviE), transmembrane protein (yviF), (csrA), flagellin (hag), flagellar protein (yviH), flagellar hook-associated protein 2 (fliD), flagellar protein (fliS), flagellar protein (fliT), sigma-54 modulator homolog (yviI), and (secA) genes, complete cds.] [LE:1217] [RE:1870] [DI:complement] >gp:[GI:e1184457:g2636077] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yvyE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:yvhK; similar to hypothetical] [SP:P32437] [LE:48723] [RE:49376] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_35945277_c3_1463 3573 7345 1065 354 1275 5.8e−130 Description sp:[LN:RF2_BACSU] [AC:P28367:O34444] [GN:PRFB] [OR:BACILLUS SUBTILIS] [DE:PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2)] [SP:P28367:O34444] [DB:swissprot] >pir:[LN:JN0146] [AC:H69681:JN0146] [PN:translation releasing factor RF-2:peptide chain release factor 2:prfB] [GN:prfB] [CL:translation releasing factor] [OR:Bacillus subtilis] [DB:pir1] >gp:[GI:e1184435:g2636055] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:peptide chain release factor 2] [GN:prfB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P28367] [LE:29109:30139] [RE:30137:30210] [DI:complementJoin] >gp:[GI:g2331287] [LN:AF013188] [AC:AF013188] [PN:release factor 2] [GN:prfB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis release factor 2 (prfB) gene, complete cds.] [NT:orf3; naturally occurring frame-shift] [LE:75:148] [RE:146:1176] [DI:directJoin] >gp:[GI:g2618874] [LN:AF017113] [AC:AF017113] [PN:putative peptide chain release factor RF-2] [GN:prfB] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:83:156] [RE:154:1184] [DI:directJoin] >gp:[GI:e1184435:g2636055] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:peptide chain release factor 2] [GN:prfB] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P28367] [LE:29109:30139] [RE:30137:30210] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_35988961_f2_376 3574 7346 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_36131311_c3_1455 3575 7347 696 231 194 2.1e−15 Description gp:[GI:g451867] [LN:BACFLGMK] [AC:L14437] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain W168) [library:lambda gtWES library] [DB:genpept-bct1] [DE:Bacillus subtilis (clones pDM116 and pDM113] flagellin synthesis regulatory protein (flgM) and flagellar hook-filament junction protein [flgK] genes and orf139, orf160, orfx, complete cds's.] [NT:in Z18629, ORFX is called comForf3; ORFX; putative] [LE:<1] [RE:754] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_36133385_c3_1377 3576 7348 681 226 203 2.3e−16 Description pir:[LN:G69798] [AC:G69798] [PN:hypothetical protein yetJ] [GN:yetJ] [CL:hypothetical protein yetJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182699:g2633033] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yetJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [LE:186800] [RE:187444] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_36229676_c1_936 3577 7349 795 264 238 4.5e−20 Description gp:[GI:g3172115] [LN:ACCPCAOP] [AC:L05770:U04359:M33798:U20284:U11554:L13114:L03407] [PN:beta-ketoadipate enol-lactone hydrolase] [GN:pcaD] [OR:Acinetobacter sp. ADP1] [DB:genpept-bct2] [EC:3.1.1.24] [DE:Acinetobacter sp. ADP1 pca-qui-pob supraoperonic cluster, complete sequence.] [NT:ELH] [LE:6843] [RE:7643] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_36230252_c1_1000 3578 7350 777 258 480 1.0e−45 Description pir:[LN:B69627] [AC:B69627] [PN:transcription repressor of fructose operon fruR] [GN:fruR] [CL:regulatory protein gutR] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185028:g2633809] [LN:BSUB0008] [AC:Z99111:AL009126] [PN:transcriptional regulator (DeoR family)] [GN:fruR] [FN:negative regulation of the fructose operon] OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [LE:112193] [RE:112948] [DI:direct] >gp:[GI:g3282123] [LN:AF012285] [AC:AF012285:AF012284:U51911] [PN:FruR] [GN:fruR] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis mobA-nprE gene region.] [NT:similar to L. lactis lactose PTS system repressor,] [LE:12681] [RE:13436] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_36367302_c3_1330 3579 7351 564 187 122 2.7e−06 Description sp:[LN:Y359_METJA] [AC:Q57805] [GN:MJ0359] [OR:METHANOCOCCUS JANNASCHII] [DE:HYPOTHETICAL PROTEIN MJ0359] [SP:Q57805] [DB:swissprot] >pir:[LN:G64344] [AC:G64344] [PN:hypothetical protein MJ0359] [OR:Methanococcus jannaschii] [DB:pir2] [MP:REV327449-326805] >gp:[GI:g1591068] [LN:U67489] [AC:U67489:L77117] [PN:M. jannaschii predicted coding region MJ0359] [GN:MJ0359] [OR:Methanococcus jannaschii] [DB:genpept-bct2] [DE:Methanococcus jannaschii section 31 of 150 of the complete genome.] [NT:hypothetical protein; identified by GeneMark;] [LE:2497] [RE:3141] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_336563_c2_1302 3580 7352 1074 357 908 4.5e−91 Description pir:[LN:D70020] [AC:D70020] [PN:ABC transporter (ATP-binding protein) homolog yusC] [GN:yusC] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184353:g2635771] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to ABC transporter (ATP-binding protein)] LE:165325] [RE:166350] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_36601562_c3_1403 3581 7353 1182 393 1669 1.0e−171 Description sp:[LN:NORA_STAAU] [AC:P21191] [GN:NORA] [OR:STAPHYLOCOCCUS AUREUS] [DE:QUINOLONE RESISTANCE NORA PROTEIN] [SP:P21191] [DB:swissprot] >pir:[LN:A37838] [AC:A37838] [PN:norA protein] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:d1014850:g216975] [LN:STANORA] [AC:D90119] [PN:ORF for norA] [GN:norA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain TK2566) genomic DNA] [DB:genpept-bct1] [DE:S. aureus norA gene.] [LE:478] [RE:1644] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_37927_f1_282 3582 7354 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_391527_f3_880 3583 7355 930 309 700 4.9e−69 Description sp:[LN:TAGH_BACSU] [AC:P42954] [GN:TAGH] [OR:BACILLUS SUBTILIS] [DE:TEICHOIC ACID TRANSLOCATION ATP-BINDING PROTEIN TAGH] [SP:P42954] [DB:swissprot] >pir:[LN:S69203] [AC:S69203:A69721] [PN:teichoic acid translocation ATP-binding protein tagH] [GN:tagH] [CL:ATP-binding cassette homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g755153] [LN:BSU13832] [AC:U13832] [PN:ATP-binding protein] [GN:tagH] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 highly hydrophobic integral membrane protein[tagG] gene and ATP-binding protein (tagH) gene, complete cds.] [LE:1134] [RE:2717] [DI:direct] >gp:[GI:e1184476:g2636096] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP-binding protein] [GN:tagH] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P42954] [LE:75534] [RE:77117] [DI:complement] >gp:[GI:e1184476:g2636096] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:ATP-binding protein] [GN:tagH] [FN:teichoic acid translocation] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P42954] [LE:75534] [RE:77117] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3922550_f1_67 3584 7356 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3928762_f2_369 3585 7357 1368 455 839 9.2e−84 Description pir:[LN:B70007] [AC:B70007] [PN:Na+−transporting ATP synthase homolog yubG] [GN:yubG] [CL:Na+−ATP synthase chain J] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185983:g2635594] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:yubG] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to Na+−transporting ATP synthase] [LE:190389] [RE:191726] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3939218_c1_922 3586 7358 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3942263_c3_1381 3587 7359 726 241 913 1.3e−91 Description pir:[LN:C69793] [AC:C69793] [PN:conserved hypothetical protein yeeI] [GN:yeeI] [CL:hypothetical protein MG332] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182664:g2632998] [LN:BSUB0004] [AC:Z99107:AL009126] [GN:yeeI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 4 of 21):from 600701 to 813890.] [NT:similar to hypothetical proteins] [LE:151216] [RE:151938] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3944001_c1_1130 3588 7360 1524 507 684 2.4e−67 Description pir:[LN:F70012] [AC:F70012] [PN:leucyl aminopeptidase homolog yuiE] [GN:yuiE] [CL:cytosol aminopeptidase] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184284:g2635702] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yuiE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to leucyl aminopeptidase] [LE:98474] [RE:99976] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3948587_f2_340 3589 7361 873 290 378 6.5e−35 Description gp:[GI:g4980658] [LN:AE001701] [AC:AE001701:AE000512] [PN:conserved hypothetical protein] [GN:TM0164] [OR:Thermotoga maritima] [DB:genpept-bct2] [DE:Thermotoga maritima section 13 of 136 of the complete genome.] [NT:similar to GB:AE000666 percent identity:61.11;] [LE:9393] [RE:10187] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3953452_c2_1201 3590 7362 507 168 328 1.3e−29 Description pir:[LN:D69849] [AC:D69849] [PN:transcription regulation homolog yjdI] [GN:yjdI] [CL:conserved hypothetical protein HI1434] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1183226:g2633560] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:yjdI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [NT:similar to transcription regulation] [LE:82766] [RE:83245] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3955067_c2_1278 3591 7363 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3959377_f3_886 3592 7364 126 41 149 1.7e−10 Description gp:[GI:e255528:g1617429] [LN:SEABCTS] [AC:X99127] [PN:membrane protein] [FN:iron repressible ABC transport system] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis gene encoding ABC transport system.] [LE:878] [RE:1624] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3962915_f2_507 3593 7365 627 208 139 1.1e−08 Description pir:[LN:C71375] [AC:C71375] [PN:conserved hypothetical integral membrane protein TP0033] [GN:TP0033] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3322288] [LN:AE001188] [AC:AE001188:AE000520] [PN:conserved hypothetical integral membrane] [GN:TP0033] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 4 of 87 of the complete genome.] [NT:similar to PID:1001613 PID:1001643 percent] [LE:7016] [RE:7627] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_39818_f2_530 3594 7366 240 79 234 1.2e−19 Description gp:[GI:g1575061] [LN:SAU57060] [AC:U57060] [PN:ScdA] [GN:scdA] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus scdA gene, complete cds.] [NT:S. aureus cells containing a scdA disruption have] [LE:361] [RE:1035] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_3994027_f1_193 3595 7367 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4023518_f2_400 3596 7368 909 302 579 3.3e−56 Description pir:[LN:G69800] [AC:G69800] [PN:cell-division inhibitor homolog yfhF] [GN:yfhF] [CL:cell division inhibitor yfhF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182841:g2633175] [LN:BSUB0005] [AC:Z99108:AL009126] [GN:yfhF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 5 of 21):from 802821 to 1011250.] [NT:similar to cell-division inhibitor] [LE:121320] [RE:122231] [DI:complement] >gp:[GI:d1025388:g2804536] [LN:D85082] [AC:D85082] [PN:YfhF] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA, genome sequence, 79 to 81 degree region.] [LE:14211] [RE:15122] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4036093_c3_1384 3597 7369 864 287 461 1.0e−43 Description pir:[LN:B69866] [AC:B69866] [PN:transcription regulator LysR family homolog ykuM] [GN:ykuM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181918:g2632234] [LN:BS16829KB] [AC:AJ222587] [PN:YkuM protein] [GN:ykuM] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 29 kB DNA fragment from ykwC gene to cse15 gene.] [NT:homologous to LysR type transcriptional regulators] [LE:20403] [RE:21284] [DI:direct] >gp:[GI:e1185004:g2633785] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykuM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to transcriptional regulator (LysR family)] [LE:90659] [RE:91540] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4072006_f3_845 3598 7370 201 66 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4095055_f2_463 3599 7371 894 297 512 4.2e−49 Description pir:[LN:B71256] [AC:B71256] [PN:conserved hypothetical integral membrane protein TP0986] [GN:TP0986] [OR:Treponema pallidum subsp. pallidum] [SR:, syphilis spirochete] [DB:pir2] >gp:[GI:g3323311] [LN:AE001266] [AC:AE001266 :AE000520] [PN:conserved hypothetical integral membrane] [GN:TP0986] [OR:Treponema pallidum] [DB:genpept-bct2] [DE:Treponema pallidum section 82 of 87 of the complete genome.] [NT:similar to GB:AE000511 PID:2314395 percent] [LE:1967] [RE:2851] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4096093_c3_1496 3600 7372 354 117 155 2.8e−11 Description pir:[LN:B42573] [AC:B42573] [PN:urf120] [OR:Paracoccus denitrificans] [DB:pir2] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4100093_c3_1419 3601 7373 1161 386 489 1.1e−46 Description pir:[LN:E64556] [AC:E64556] [PN:para-aminobenzoate synthetase] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313385] [LN:AE000547] [AC:AE000547:AE000511] [PN:para-aminobenzoate synthetase (pabB)] [GN:HP0293] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 25 of 134 of the complete genome.] [NT:similar to GB:K02673 SP:P05041 GB:U07748 GB:U07749] [LE:20379] [RE:22058] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4101643_c2_1314 3602 7374 399 132 304 4.5e−27 Description pir:[LN:F70023] [AC:F70023] [PN:hypothetical protein yutD] [GN:yutD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184310:g2635728] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yutD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:121344] [RE:121652] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4103393_c2_1215 3603 7375 597 198 436 4.7e−41 Description sp:[LN:PABA_SALTY] [AC:P06193] [GN:PABA] OR:SALMONELLA TYPHIMURIUM] [EC:4.1.3.—] [DE:(EC 4.1.3.—) (ADC SYNTHASE)] [SP:P06193] [DB:swissprot] >pir:[LN:S09636] [AC:S09636] [PN:pabA protein] [GN:pabA] [CL:glutamine amidotransferase trpG homology] [OR:Salmonella typhimurium] [DB:pir2] >gp:[GI:g47816] [LN:STPABA] [AC:X02603] [OR:Salmonella typhimurium] [DB:genpept-bct1] [DE:Salmonella typhimurium pabA gene for para-aminobenzoate synthase glutamine amidotransferase.] [NT:pabA gene product (aa 1–187)] [SP:P06193] [LE:1] [RE:564] [DI:direct] >gp:[GI:g154228] [LN:STYPABAA] [AC:M32355] [OR:Salmonella typhimurium] [SR:S. typhimurium DNA, clone pSZD3] [DB:genpept-bct1] [DE:S. typhimurium glutamine amidotransferase subunit of para-aminobenzoate synthase (pabA) and pot. cell division proteinfic] genes, complete cds.] [NT:glutamine amidotransferase] [LE:970] [RE:1533] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4110888_c3_1380 3604 7376 405 134 93 0.00010 Description gp:[GI:g3283053] [LN:AF054173] [AC:AF054173] [PN:staphylococcal accessory regulator A homolog] [GN:sarA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] [DE:Staphylococcus epidermidis staphylococcal accessory regulator A homolog (sarA) gene, complete cds.] [LE:887] [RE:1261] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4111691_c1_1018 3605 7377 744 247 351 1.5e−31 Description sp:[LN:YCSJ_BACSU] [AC:P42967] [GN:YCSJ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 63.8 KD PROTEIN IN SIPU-PBPC INTERGENIC REGION] [SP:P42967] [DB:swissprot] >pir:[LN:G69765] [AC:G69765:I39898] [PN:allophanate hydrolase homolog ycsJ:probable urea amidolyase] [GN:ycsJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:d1007939:g790943] [LN:BAC39R] [AC:D38161] [PN:urea amidolyase] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168TrpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis genome around 39 degrees region encoding 17 ORFs, complete cds.] [LE:10358] [RE:12094] [DI:direct] >gp:[GI:e1182375:g2632709] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:ycsJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to allophanate hydrolase] [SP:P42967] [LE:56667] [RE:58403] [DI:direct] >gp:[GI:d1009674:g1805477] [LN:D50453] [AC:D50453] [PN:homologues to hypothetical protein HI1731 of H.] [GN:ycsJ] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:139065] [RE:140801] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4195817_c1_955 3606 7378 1743 580 2597 4.7e−270 Description gp:[GI:e264711:g1262136] [LN:SAPBP4GEN] [AC:X91786] [PN:ATP-binding cassette transporter A] [GN:abcA] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus abcA, pbp4, and tagD genes.] [LE:311] [RE:2038] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_42167_c1_959 3607 7379 834 277 1083 1.3e−109 Description gp:[GI:g4928292] [LN:AF132117] [AC:AF132117] [PN:FhuA] [GN:fhuA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus ferrichrome uptake operon, complete sequence and unknown genes.] [NT:ATP binding protein.] [LE:2780] [RE:3514] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_422162_f3_795 3608 7380 456 151 439 2.2e−41 Description pir:[LN:B69868] [AC:B69868] [PN:6-pyruvoyl tetrahydrobiopterin synthase homolog ykvK] [GN:ykvK] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184963:g2633744] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvK] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to 6-pyruvoyl tetrahydrobiopterin synthase] [LE:44776] [RE:45225] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_422800_f3_903 3609 7381 447 148 627 2.7e−61 Description gp:[GI:g3283053] [LN:AF054173] [AC:AF054173] [PN:staphylococcal accessory regulator A homolog] [GN:sarA] [OR:Staphylococcus epidermidis] [DB:genpept-bct2] DE:Staphylococcus epidermidis staphylococcal accessory regulator A homolog (sarA) gene, complete cds.] [LE:887] [RE:1261] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_425927_f1_232 3610 7382 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_429675_f2_558 3611 7383 216 71 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4330390_c3_1517 3612 7384 876 291 787 3.0e−78 Description pir:[LN:A70016] [AC:A70016] [PN:hypothetical protein yunF] [GN:yunF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184318:g2635736] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yunF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:127975] [RE:128829] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4351465_c2_1159 3613 7385 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4461693_f2_596 3614 7386 240 79 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4487588_f3_797 3615 7387 609 202 81 0.00094 Description pir:[LN:B69478] [AC:B69478] [PN:NADH dehydrogenase (ubiquinone),, 43.2 kDa subunit homolog] [OR:Archaeoglobus fulgidus] [EC:1.6.5.3] [DB:pir2] >gp:[GI:g2648717] [LN:AE000976] [AC:AE000976:AE000782] [PN:F420H2:quinone oxidoreductase, 43.2 kDa subunit,] [GN:AF1827] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 131 of 172 of the complete genome.] [NT:similar to PID:882405 SP:P50973 percent identity:] [LE:4241] [RE:5455] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4501250_c1_1097 3616 7388 1080 359 871 3.7e−87 Description gp:[GI:d1020364:g1944409] [LN:D87026] [AC:D87026:D28136] [PN:membrane protein] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus (strain:TRBE14) DNA] [DB:genpept-bct1] [DE:Bacillus stearothermophilus glycogen operon genes, complete cds.] [NT:The ORF is similar to the Alkaligenes eutrophus] [LE:144] [RE:1097] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4511550_c2_1247 3617 7389 1278 425 318 1.5e−28 Description sp:[LN:YHAD_ECOLI] [AC:P23524] [GN:YHAD] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 39.1 KD PROTEIN IN RNPB-SOHA INTERGENIC REGION (ORF 3)] [SP:P23524] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4535652_f1_255 3618 7390 225 74 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4539143_c1_1066 3619 7391 942 313 970 1.2e−97 Description sp:[LN:HPRK_BACSU] [AC:O34483] [GN:PTSK] [OR:BACILLUS SUBTILIS] [EC:2.7.1.—] [DE:HPR(SER) KINASE,] [SP:O34483] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4578956_f1_101 3620 7392 297 98 79 0.021 Description gp:[GI:e1350598:g3881046] [LN:CEY51A2D] [AC:AL021497] [GN:Y51A2D.12] [OR:Caenorhabditis elegans] [DB:genpept-inv1] [DE:Caenorhabditis elegans cosmid Y51A2D, complete sequence.] [LE:83074:83534:84872] [RE:83208:83768:84978] [DI:complementJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4687843_c2_1324 3621 7393 330 109 242 1.7e−20 Description pir:[LN:C70026] [AC:C70026] [PN:hypothetical protein yuzD] [GN:yuzD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184300:g2635718] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yuzD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:112018] [RE:112344] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4689077_c2_1271 3622 7394 333 110 466 3.1e−44 Description sp:[LN:CLPP_BACSU] [AC:P80244:O08433] [GN:CLPP] [OR:BACILLUS SUBTILIS] [EC:3.4.21.92] [DE:(ENDOPEPTIDASE CLP) (CASEINOLYTIC PROTEASE) (PROTEASE TI)] [SP:P80244:O08433] [DB:swissprot] >pir:[LN:B69601] [AC:B69601:A47683] [PN:ATP-dependent clp proteinase, chain P:stress protein G7] CGN:clpP] [CL:ATP-dependent Clp proteinase chain P] [OR:Bacillus subtilis] [EC:3.4.21.—] [DB:pir2] >gp:[GI:e1186142:g2635967] [LN:BSUB0018] [AC:Z99121:AL009126] [PN:ATP-dependent Clp protease proteolytic subunit] [GN:clpP] [OR:Bacillus subtilis] [DB:genpept-bct1] [EC:3.4.21.92] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:alternate gene name:yvdN] [SP:P80244] [LE:145744] [RE:146337] [DI:direct] >gp:[GI:e313044:g1945673] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvdN] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:similar to CLPP_ECOLI ATP-dependent clp protease] [SP:P80244] [LE:35334] [RE:35927] [DI:complement] >gp:[GI:g2668494] [LN:BSU59754] [AC:U59754] [PN:ClpP] [GN:clpP] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis Clp protease proteolytic component (clpP) gene, complete cds.] [NT:proteolytic component of Clp protease] [LE:140] [RE:733] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4689130_f2_614 3623 7395 306 101 81 0.029 Description pir:[LN:A58932] [AC:A58932] [PN:cytochrome C-type biogenesis protein CCMF] [GN:yejR:ccmF] [OR:mitochondrion Cyanidioschyzon merolae] [DB:pir2] >gp:[GI:d1037513:g4115789] [LN:D89861] [AC:D89861] [PN:cytochrome C-type biogenesis protein CCMF] [GN:yejR or ccmF] [OR:Mitochondrion Cyanidioschyzon merolae] [SR:Cyanidioschyzon merolae (strain:10D) mitochondrion DNA] [DB:genpept-pln1] [DE:Cyanidioschyzon merolae mitochondrial DNA, complete sequence.] [LE:16296] [RE:18158] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4695293_c3_1487 3624 7396 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4703180_c1_1041 3625 7397 453 150 541 3.5e−52 Description gp:[GI:e1393149:g4490608] [LN:SAU133495] [AC:AJ133495] [PN:NRD1] [GN:nrd1] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus ribonucleotide reductase operon.] [LE:138] [RE:536] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4709575_c2_1309 3626 7398 354 117 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4726462_f2_572 3627 7399 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4726527_f3_774 3628 7400 528 175 749 3.2e−74 Description pir:[LN:D69868] [AC:D69868] [PN:conserved hypothetical protein ykvM] [GN:ykvM] [CL:hypothetical protein ykvM] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184965:g2633746] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to hypothetical proteins] [LE:45967] [RE:46464] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4773392_f2_359 3629 7401 288 95 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4775287_c3_1420 3630 7402 1008 335 238 1.3e−34 Description sp:[LN:YBGK_ECOLI] [AC:P75745] [GN:YBGK] [OR:ESCHERICHIA COLI] [DE:HYPOTHETICAL 34.4 KD PROTEIN IN PHRB-NEI INTERGENIC REGION] [SP:P75745] [DB:swissprot] >pir:[LN:G64806] [AC:G64806] [PN:ybgK protein] [GN:ybgK] [CL:hypothetical protein HI1730] [OR:Escherichia coli] [DB:pir2] >gp:[GI:d1036362:g4062308] [LN:D90710] [AC:D90710:AB001340] [PN:Hypothetical protein HI1730] [OR:Escherichia coli] [SR:Escherichia coli (strain:K12) DNA, clone:Kohara clone #175] [DB:genpept-bct1] [DE:Escherichia coli genomic DNA. (15.9–16.3 min).] [NT:ORF_ID:o175#7; similar to PIR Accession Number] [LE:6967] [RE:7899] [DI:direct] >gp:[GI:g1786930] [LN:AE000174] [AC:AE000174:U00096] [PN:putative carboxylase] [GN:ybgK] [FN:putative enzyme; Not classified] [OR:Escherichia coli] [DB:genpept-bct2] [DE:Escherichia coli K-12 MG1655 section 64 of 400 of the complete genome.] [NT:o310; This 310 aa ORF is 48 pct identical (1 gap)] [LE:10112] [RE:11044] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_47763_f3_814 3631 7403 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4804643_f1_90 3632 7404 246 81 75 0.0026 Description gp:[GI:e1332553:g3764009] [LN:PFMAL3P4] [AC:AL008970] [GN:MAL3P4.11] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv1] [DE:Plasmodium falciparum MAL3P4, complete sequence.] [NT:predicted using hexExon; MAL3P4.11 (PFC0510w),] [LE:68636] [RE:71146] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4806575_c2_1171 3633 7405 651 216 503 3.7e−48 Description pir:[LN:H69854] [AC:H69854] [PN:hypothetical protein ykaA] [GN:ykaA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1181486:g2632006] [LN:BSAJ2571] [AC:AJ002571] [PN:YkaA] [GN:ykaA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR.] [LE:2613] [RE:3230] [DI:complement] >gp:[GI:e1183305:g2633639] [LN:BSUB0007] [AC:Z99110:AL009126] [GN:ykaA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 7 of 21):from 1194391 to 1411140.] [LE:155562] [RE:156179] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4876077_f3_796 3634 7406 714 237 778 2.7e−77 Description pir:[LN:C69868] [AC:C69868] [PN:coenzyme PQQ synthesis homolog ykvL] [GN:ykvL] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184964:g2633745] [LN:BSUB0008] [AC:Z99111:AL009126] [GN:ykvL] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 8 of 21):from 1394791 to 1603020.] [NT:similar to coenzyme PQQ synthesis] [LE:45218] [RE:45949] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4885876_c1_1071 3635 7407 918 305 829 1.1e−82 Description sp:[LN:YVCJ_BACSU] [AC:006973] [GN:YVCJ] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 33.9 KD PROTEIN IN CRH-TRXB INTERGENIC REGION] [SP:O06973] [DB:swissprot] >pir:[LN:H70031] [AC:H70031] [PN:conserved hypothetical protein yvcJ] [GN:yvcJ] [CL:Bacillus subtilis conserved hypothetical protein yvcJ] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186165:g2635990] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvcJ] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [SP:O06973] [LE:171011] [RE:171898] [DI:complement] >gp:[GI:e313026:g1945650] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvcJ] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:similar to hypothetical MTCY21B4] [SP:O06973] [LE:9773] [RE:10660] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4892878_c3_1357 3636 7408 1077 358 455 4.5e−43 Description gp:[GI:g1913906] [LN:SAU91741] [AC:U91741] [PN:TagX] [GN:tagX] [FN:teichoic acid biosynthesis] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus teichoic acid biosynthesis TagB gene, partial cds and TagX and TagD genes, complete cds.] [LE:632] [RE:1471] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_4898376_f2_574 3637 7409 207 68 52 0.024 Description gp:[GI:g4588017] [LN:AF087657] [AC:AF087657] [PN:NADH-ubiquinone oxidoreductase chain 6] [GN:ND6] [OR:Mitochondrion Agrocybe aegerita] [SR:Agrocybe aegerita] [DB:genpept-pln2] [DE:Agrocybe aegerita NADH-ubiquinone oxidoreductase chain 6 (ND6)gene, mitochondrial gene encoding mitochondrial protein, complete cds.] [NT:NADH dehydrogenase] [LE:34] [RE:453] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5084652_f3_849 3638 7410 507 168 536 1.2e−51 Description gp:[GI:g1575061] [LN:SAU57060] [AC:U57060] [PN:ScdA] [GN:scdA] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus scdA gene, complete cds.] [NT:S. aureus cells containing a scdA disruption have] [LE:361] [RE:1035] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5117793_c3_1531 3639 7411 273 91 197 9.9e−16 Description sp:[LN:YRN3_VIBPA] [AC:P46231] [OR:VIBRIO PARAHAEMOLYTICUS] [DE:HYPOTHETICAL PROTEIN IN RNT 5′REGION (ORF3) (FRAGMENT)] [SP:P46231] [DB:swissprot] >gp:[GI:g497126] [LN:VPU06949] [AC:U06949] [PN:ORF3] [OR:Vibrio parahaemolyticus] [DB:genpept-bct1] [DE:Vibrio parahaemolyticus BB22 RNase T (rnt) gene and flagellar motor component (motY) gene, complete cds.] [LE:<1] [RE:420] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5131265_c2_1243 3640 7412 276 91 80 0.0071 Description gp:[GI:g3582235] [LN:AE001272] [AC:AE001272] [PN:L. lactis predicted coding region ORF00014] [GN:ORF00014] [OR:Lactococcus lactis] [DB:genpept-bct2] [DE:Lactococcus lactis DPC3147 plasmid pMRC01, complete plasmid sequence.] [NT:hypothetical protein; identified by GeneMark;] [LE:10983] [RE:11600] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5182962_f1_196 3641 7413 1068 355 295 1.3e−30 Description sp:[LN:RESE_BACSU] [AC:P35164] [GN:RESE] [OR:BACILLUS SUBTILIS] EC:2.7.3.—] [DE:SENSOR PROTEIN RESE,] [SP:P35164] [DB:swissprot] >pir:[LN:H69691] [AC:H69691:S45560] [PN:two-component sensor histidine kinase resE] [GN:resE] [CL:sensor histidine kinase homology] [:OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g410142] [LN:BACDIA] [AC:L09228] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis spoVA to serA region.] [NT:ORFX18] [LE:22425] [RE:24194] [DI:direct] >gp:[GI:e1185580:g2634746] [LN:BSUB0013] [AC:Z99116:AL009126] [PN:two-component sensor histidine kinase] [GN:resE] [FN:involved in global regulation of aerobic and] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 13 of 21): from 2395261 to 2613730.] [NT:alternate gene name:ypxE] [SP:P35164] [LE:19389] [RE:21158] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5195393_c3_1352 3642 7414 654 217 1088 3.8e−110 Description gp:[GI:e255543:g1617434] [LN:SESIRR] [AC:X99128] [PN:putative iron dependant repressor] [GN:sirR] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:S. epidermidis sirR gene.] [LE:14] [RE:658] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5276677_c1_1026 3643 7415 1566 521 703 2.4e−69 Description pir:[LN:B64622] [AC:B64622] [PN:osmoprotection protein] [OR:Helicobacter pylori] [DB:pir2] >gp:[GI:g2313949] [LN:AE000593] [AC:AE000593:AE000511] [PN:osmoprotection protein (proWX)] [GN:HP0818] [OR:Helicobacter pylori 26695] [DB:genpept-bct2] [DE:Helicobacter pylori 26695 section 71 of 134 of the complete genome.] [NT:similar to PID:1109685 SP:Q45461 GB:AL009126] [LE:4862] [RE:6523] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5283592_f1_215 3644 7416 288 95 73 0.014 Description gp:[GI:g1054677] [LN:CCCOX3] [AC:X92734] [PN:cytochrome oxidase] [GN:coxIII] [OR:Mitochondrion Chara corallina] [SR:Chara corallina] [DB:genpept-pln1] [DE:C. corallina mitochondrial cox3 gene.] [NT:subunit III] [LE:<1] [RE:>381] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5292175_c3_1484 3645 7417 1323 440 2112 1.2e−218 Description gp:[GI:g3152725] [LN:AF065394] [AC:AF065394] [PN:enolase] [GN:eno] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus enolase (eno) gene, complete cds.] [NT:ENO; laminin binding protein] [LE:103] [RE:1407] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_53552_f2_450 3646 7418 660 219 179 8.0e−14 Description sp:[LN:GRPB_BACFI] [AC:Q45133] [GN:GRPB] [OR:BACILLUS FIRMUS] [DE:GLUTAMATE-RICH PROTEIN GRPB] [SP:Q45133] [DB:swissprot] >gp:[GI:g1209681] [LN:BFU39410] [AC:U39410] [PN:glutamate-rich protein] [GN:grpB] [OR:Bacillus firmus] [SR:Bacillus firmus strain=OF4] [DB:genpept-bct1] [DE:Bacillus firmus OrfA, OrfB, glutamate-rich protein (grpA), OrfC, and glutamate-rich protein (grpB) genes, complete cds.] [LE:2695] [RE:3219] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5355325_c3_1454 3647 7419 888 295 526 1.4e−50 Description sp:[LN:DEGV_BACSU] [AC:P32436] [GN:DEGV] [OR:BACILLUS SUBTILIS] [DE:DEGV PROTEIN] [SP:P32436] [DB:swissprot] >pir:[LN:D30191] [AC:I40386:D30191:A70042:S28596] [PN:conserved hypothetical protein yviA] [GN:yviA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g39848] [LN:BSCOMFG] [AC:Z18629] [PN:U3] [GN:degUorf3] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis comF gene.] [SP:P32436] [LE:1] [RE:846] [DI:direct] >gp:[GI:e1184454:g2636074] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yviA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:degV, sacU; similar to] [LE:45634] [RE:46479] [DI:complement] >gp:[GI:g1762331] [LN:BSU56901] [AC:U56901] [GN:degV] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis putative transcriptional regulator (yvhJ), Ycr59c/YigZ homolog (yvhK), histidine kinase (degS), transcriptional regulator of degradation enzyme (degU), (degV), (comFA), (comFB), (comFC), flagellar protein (yviB), negative regulator of flagellin (flgM), flagellar protein (yviC), flagellar-hook associated protein1 (flgK), flagellar-hook associated protein 3 (flgL), (yviE), transmembrane protein (yviF), (csrA), flagellin (hag), flagellar protein (yviH), flagellar hook-associated protein 2 (fliD), flagellar protein (fliS), flagellar protein (fliT), sigma-54 modulator homolog (yviI), and (secA) genes, complete cds.] [LE:4114] [RE:4959] [DI:direct] >gp:[GI:e1184454:g2636074] [LN:BSUB0019] [AC:Z99122:AL009126] [GN:yviA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [NT:alternate gene name:degV, sacU; similar to] [SP:P32436] [LE:45634] [RE:46479] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5367843_c3_1488 3648 7420 759 252 791 1.1e−78 Description sp:[LN:EST_BACST] [AC:Q06174] [GN:EST] [OR:BACILLUS STEAROTHERMOPHILUS] [EC:3.1.1.1] [DE:CARBOXYLESTERASE PRECURSOR,] [SP:Q06174] [DB:swissprot] >pir:[LN:JC1374] [AC:JC1374] [PN:carboxylesterase,] [GN:Est] [OR:Bacillus stearothermophilus] [EC:3.1.1.1] [DB:pir2] >gp:[GI:d1002674:g216314] [LN:BACPBH7] [AC:D12681] [PN:esterase] [OR:Bacillus stearothermophilus] [SR:Bacillus stearothermophilus DNA, clone pBH7] [DB:genpept-bct1] [DE:Bacillus stearothermophilus esterase gene.] [LE:181] [RE:924] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_57800_c3_1494 3649 7421 147 48 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5869433_f2_542 3650 7422 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5869702_f2_595 3651 7423 309 102 87 0.015 Description sp:[LN:YMW6_YEAST] [AC:Q04264:Q04780] [GN:YMR076C:YM9582.01C:YM9916.15C] [OR:SACCHAROMYCES CEREVISIAE] [SR:,BAKER'S YEAST] [DE:HYPOTHETICAL 147.0 KD PROTEIN IN ABF2-CHL12 INTERGENIC REGION] [SP:Q04264:Q04780] [DB:swissprot] >pir:[LN:554451] [AC:554451:552836] [PN:hypothetical protein YMR076c:hypothetical protein YM9582.01c:hypothetical protein YM9916.15c] [GN:PDS5] [OR:Saccharomyces cerevisiae] [DB:pir2] [MP:13R] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_5938762_c1_987 3652 7424 1704 567 566 7.8e−55 Description sp:[LN:CYDD_HAEIN] [AC:P45082] [GN:CYDD:HI1157] [OR:HAEMOPHILUS INFLUENZAE] [DE:TRANSPORT ATP-BINDING PROTEIN CYDD] [SP:P45082] [DB:swissprot] >pir:[LN:F64186] [AC:F64186] [PN:ABC-type transport protein cydD] [GN:cydD] [CL:unassigned ATP-binding cassette proteins:ATP-binding cassette homology] [OR:Haemophilus influenzae] [DB:pir2] >gp:[GI:g1574714] [LN:U32795] [AC:U32795:L42023] [PN:ATP-binding protein protein (cydD)] [GN:HI1157] [OR:Haemophilus influenzae Rd] [DB:genpept-bct2] [DE:Haemophilus influenzae Rd section 110 of 163 of the complete genome.] [NT:similar to GB:L21749 SP:P29018 GB:L25859 PID:146416] [LE:6353] [RE:8113] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6023915_c2_1313 3653 7425 969 322 1144 4.4e−116 Description pir:[LN:D70023] [AC:D70023 ] [PN:lipoic acid synthetase, yutB] [GN:yutB] [CL:lipoic acid synthase] [OR:Bacillus subtilis] [EC:2.8.1.—] [DB:pir2] >gp:[GI:e1184312:g2635730] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yutB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to lipoic acid synthetase] [LE:122382] [RE:123188] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6037756_f3_682 3654 7426 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6050010_f1_177 3655 7427 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6051500_c1_972 3656 7428 189 62 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6051537_c1_1063 3657 7429 276 91 112 1.0e−06 Description sp:[LN:CSBA_BACSU] [AC:P37953] [GN:CSBA] [OR:BACILLUS SUBTILIS] [DE:CSBA PROTEIN] [SP:P37953] [DB:swissprot] >gp:[GI:g142780] [LN:BACCSBA] [AC:M80473] [GN:csbA] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain 168, sub_species Marburg) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis csbA and uvr/dinA genes, complete cds.] [NT:putative membrane protein; putative] [LE:380] [RE:610] [DI:direct] >gp:[GI:g142842] [LN:BACDINA76] [AC:M64048] [PN:DNase inhibitor] [GN:dinA] [OR:Bacillus subtilis] [SR:Bacillus subtilis DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNase inhibitor (dinA76) gene, complete cds and promoter region.] [LE:64] [RE:294] [DI:direct] >gp:[GI:e1184424:g2636044] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:putative membrane protein] [GN:csbA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 19 of 21): from 3597091 to 3809700.] [SP:P37953] [LE:17086] [RE:17316] [DI:complement] >gp:[GI:g2618840] [LN:AF017113] [AC:AF017113] [PN:CsbA] [GN:csbA] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis 300–304 degree genomic sequence.] [LE:12977] [RE:13207] [DI:direct] >gp:[GI:e1184424:g2636044] [LN:BSUB0019] [AC:Z99122:AL009126] [PN:putative membrane protein] [GN:csbA] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept] [DE:Bacillus subtilis complete genome (section 19 of 21):from 3597091 to 3809700.] [SP:P37953] [LE:17086] [RE:17316] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6053176_f1_195 3658 7430 519 172 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6056628_c3_1339 3659 7431 150 49 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6057338_c3_1518 3660 7432 840 279 622 9.1e−61 Description pir:[LN:H70015] [AC:H70015] [PN:hypothetical protein yunE] [GN:yunE] OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184317:g2635735] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yunE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:127136] [RE:127957] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6094177_c2_1235 3661 7433 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6101581_f1_74 3662 7434 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6257763_c3_1479 3663 7435 660 219 189 1.7e−13 Description gp:[GI:g2246532] [LN:U93872] [AC:U93872] [OR:Kaposi's sarcoma-associated herpesvirus] [SR:Kaposi's sarcoma-associated herpesvirus - Human herpesvirus 8] [DB:genpept-vrl] [DE:Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds.] [NT:ORF 73, contains large complex repeat CR 73] [LE:124324] [RE:127593] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_626592_c1_935 3664 7436 852 283 233 1.5e−19 Description pir:[LN:A69463] [AC:A69463] [PN:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase (pcbD) homolog] [OR:Archaeoglobus fulgidus] [DB:pir2] >gp:[GI:g2648849] [LN:AE000986] [AC:AE000986:AE000782] [PN:2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid] [GN:AF1706] [OR:Archaeoglobus fulgidus] [DB:genpept-bct2] [DE:Archaeoglobus fulgidus section 121 of 172 of the complete genome.] [NT:similar to GP:1395174 percent identity:29.41;] [LE:11775] [RE:12491] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6423376_f3_670 3665 7437 261 86 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6437525_f3_862 3666 7438 294 97 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6440640_c3_1379 3667 7439 1278 425 139 6.0e−06 Description pir:[LN:D71621] [AC:D71621] [PN:hypothetical protein PFB0185w] [GN:PFB0185w] [OR:Plasmodium falciparum] [DB:pir2] >gp:[GI:g3845117] [LN:AE001378] [AC:AE001378:AE001362] [PN:hypothetical protein] [GN:PFB0185w] [OR:Plasmodium falciparum] [SR:malaria parasite P. falciparum] [DB:genpept-inv2] [DE:Plasmodium falciparum chromosome 2, section 15 of 73 of the complete sequence.] [NT:predicted by GlimmerM] [LE:6504:8652] [RE:8473:9075] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6444037_c2_1180 3668 7440 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6642827_c3_1342 3669 7441 2403 800 1527 1.1e−156 Description pir:[LN:A70010] [AC:A70010] [PN:NADH dehydrogenase homolog yufT] [GN:yufT] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184238:g2635656] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yufT] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to NADH dehydrogenase] [LE:48758] [RE:51082] [DI:direct] >gp:[GI:e311455:g1934817] [LN:BSZ93937] [AC:Z93937] [PN:unknown] [GN:yufT] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment from yufK to yufV.] [NT:potential Na/H antiporter/phaA homologue/NADH] [LE:10546] [RE:12870] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6650312_f2_600 3670 7442 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6675016_c1_1077 3671 7443 132 43 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6680312_f2_518 3672 7444 714 237 211 4.7e−17 Description gp:[GI:g3329623] [LN:CELF36H12] [AC:AF078790] [GN:F36H12.3] [OR:Caenorhabditis elegans] [DB:genpept-inv2] [DE:Caenorhabditis elegans cosmid F36H12.] [NT:coded for by C. elegans cDNA CEMSF30F] [LE:21606:21872:22500:22677] [RE:21701:22454:22629:22875] [DI:directJoin] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6681577_c1_1110 3673 7445 432 143 277 3.3e−24 Description pir:[LN:G70020] [AC:G70020] [PN:hypothetical protein yusF] [GN:yusF] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184356:g2635774] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [LE:167450] [RE:167890] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6695968_c2_1320 3674 7446 1470 489 2005 2.5e−207 Description gp:[GI:g4530241] [LN:AF101234] [AC:AF101234] [PN:D-alanine-D-alanyl carrier protein ligase DltA] [GN:dltA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus dltABCD operon, complete sequence; and unknown gene.] [LE:1590] [RE:3047] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6822175_c2_1222 3675 7447 1914 637 1229 4.3e−125 Description pir:[LN:F69901] [AC:F69901] [PN:DNA helicase recQ:ATP-dependent DNA helicase homolog yocI] [GN:yocI] [CL:recQ protein:DEAD/H box helicase homology:recQ helicase homology] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:g2619051] [LN:AF027868] [AC:AF027868] [PN:RecQ homolog] [GN:yocI] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosome region between terC and odhAB.] [NT:similar to E. coli RecQ protein (607 aa)] [LE:74004] [RE:75779] [DI:complement] >gp:[GI:e1185394:g2634315] [LN:BSUB0011] [AC:Z99114:AL009126] [GN:yocI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 11 of 21):from 2000171 to 2207900.] [NT:similar to ATP-dependent DNA helicase] [LE:93095] [RE:94870] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6823453_c3_1346 3676 7448 483 160 270 1.8e−23 Description gp:[GI:d1036085:g4001729] [LN:AB015981] [AC:AB015981] [PN:MnhE] [GN:mnhE] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain:209P) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds.] [LE:5474] [RE:5953] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6829638_c3_1402 3677 7449 186 61 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6833313_c3_1371 3678 7450 1920 639 550 3.9e−53 Description pir:[LN:B70001] [AC:B70001] [PN:ABC transporter (permease) homolog ytsD] [GN:ytsD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185910:g2635521] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:ytsD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to ABC transporter (permease)] [LE:110708] [RE:112648] [DI:complement] >gp:[GI:g2293178] [LN:AF008220] [AC:AF008220] [PN:YtsD] [GN:ytsD] [OR:Bacillus subtilis] [DB:genpept-bct2] [DE:Bacillus subtilis rrnB-dnaB genomic region.] [NT:similarity to NADH dehydrogenase] [LE:67779] [RE:69719] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6836088_c1_1118 3679 7451 1320 439 1260 2.2e−128 Description pir:[LN:G70019] [AC:G70019] [PN:conserved hypothetical protein yurX] [GN:yurX] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184348:g2635766] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yurX] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:160723] [RE:162036] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_6929512_c1_1119 3680 7452 1416 471 2098 3.6e−217 Description pir:[LN:D70019] [AC:D70019] [PN:conserved hypothetical protein yurU] [GN:yurU] [CL:Methanobacterium thermoautotrophicum ABC transporter chain Ycf24] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184345:g2635763] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yurU] [FN:unknown] [OR:Bacillus subtilis] DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:157652] [RE:159049] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_7042878_f1_40 3681 7453 177 58 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_7239188_f2_519 3682 7454 675 224 491 6.9e−47 Description pir:[LN:D70033] [AC:D70033] [PN:conserved hypothetical protein yvdD] [GN:yvdD] [CL:yeast conserved hypothetical protein YJL055w] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1186152:g2635977] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvdD] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21): from 3399551 to 3609060.] [NT:similar to hypothetical proteins] [LE:158450] [RE:159025] [DI:complement] >gp:[GI:e313036:g1945663] [LN:BSZ94043] [AC:Z94043] [PN:hypothetical protein] [GN:yvdD] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment (88 kb).] [NT:similar to YJF5_YEAST hypothetical 26.9 kd protein] [LE:22646] [RE:23221] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_7800_c1_1093 3683 7455 198 65 54 0.033 Description gp:[GI:g3789915] [LN:AF083442] [AC:AF083442] [PN:G protein-coupled receptor G2A] [OR:Mus musculus] [SR:house mouse] [DB:genpept-rod] [DE:Mus musculus G protein-coupled receptor G2A mRNA, complete cds.] [LE:147] [RE:1295] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_781415_c3_1393 3684 7456 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_783375_c2_1236 3685 7457 180 59 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_788950_c3_1347 3686 7458 531 176 219 4.6e−18 Description pir:[LN:E70008] [AC:E70008 ] [PN:conserved hypothetical protein yufB] [GN:yufB] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184243:g2635661] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yufB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:54068] [RE:54442] [DI:direct] >gp:[GI:e311512:g1934774] [LN:BSZ93932] [AC:Z93932] [PN:unknown] [GN:yufB] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:B. subtilis genomic DNA fragment from yufA to yufE.] [LE:7086] [RE:7460] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_821963_c2_1165 3687 7459 546 181 103 0.0018 Description gp:[GI:g4731376] [LN:AF135127] [AC:AF135127:AF047896] [PN:isoflavone reductase homolog Bet v 5] [GN:BETV5] [OR:Betula pendula] [SR:European white birch] [DB:genpept-pln2] [DE:Betula pendula isoflavone reductase homolog Bet V 5 (BETV5) mRNA, partial cds.] [NT:allergen; IgE binding protein] [LE:1] [RE:>900] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_822777_c3_1397 3688 7460 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_870300_c1_958 3689 7461 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_899177_c3_1335 3690 7462 930 309 596 5.2e−58 Description pir:[LN:G70046] [AC:G70046] [PN:iron-binding protein homolog yvrC] [GN:yvrC] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1249807:g2832811] [LN:BS43KBDNA] [AC:AJ223978] [PN:putative metal binding protein, YvrC] [GN:yvrC] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis 42.7 kB DNA fragment from yvsA to yvqA.] [LE:23792] [RE:24736] [DI:direct] >gp:[GI:e1184397:g2635815] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yvrC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to iron-binding protein] [LE:205551] [RE:206495] [DI:complement] >gp:[GI:e1186006:g2635831] [LN:BSUB0018] [AC:Z99121:AL009126] [GN:yvrC] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 18 of 21):from 3399551 to 3609060.] [NT:similar to iron-binding protein] [LE:3001] [RE:3945] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_900256_c1_1017 3691 7463 210 69 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_959437_c1_965 3692 7464 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_9642_f1_227 3693 7465 876 291 769 2.4e−76 Description pir:[LN:E70006] [AC:E70006] [PN:probable bacitracin resistance protein (undecapreno) yubB] [GN:yubB] [CL:Escherichia coli bacitracin resistance protein bacA] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1185988:g2635599] [LN:BSUB0016] [AC:Z99119:AL009126] [GN:yubB] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 16 of 21):from 2997771 to 3213410.] [NT:similar to bacitracin resistance protein] [LE:195935] [RE:196765] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_969075_c1_1109 3694 7466 354 117 359 6.7e−33 Description pir:[LN:B70021] [AC:B70021] [PN:arsenate reductase homolog yusI] [GN:yusI] [CL:hypothetical protein yjbD] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184359:g2635777] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusI] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to arsenate reductase] [LE:168632] [RE:168988] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_969555_f1_218 3695 7467 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_969812_f1_63 3696 7468 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_970327_c2_1301 3697 7469 297 98 167 1.5e−12 Description pir:[LN:F70020] [AC:F70020] [PU:thioredoxin homolog yusE] [GN:yusE] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184355:g2635773] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yusE] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21): from 3197001 to 3414420.] [NT:similar to thioredoxin] [LE:167128] [RE:167448] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_973400_f3_690 3698 7470 180 59 43 0.013 Description gp:[GI:e1363550:g4127809] [LN:EFAJ3161] [AC:AJ223161] [PN:hypothetical protein] [GN:orf6] [OR:Enterococcus faecalis] [DB:genpept-bct1] [DE:Enterococcus faecalis plasmid pS86, rep86 and mob86 genes.] [LE:4421] [RE:4732] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_978426_c1_1043 3699 7471 978 325 1338 1.2e−136 Description gp:[GI:e1330452:g3724155] [LN:SAA005352] [AC:AJ005352] [PN:membrane protein] [GN:sstA] [FN:iron transport protein] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:Staphylococcus aureus, Sst putative iron transport operon.] [LE:273] [RE:1245] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_9882950_c2_1204 3700 7472 1350 449 1090 2.3e−110 Description sp:[LN:YHDP_BACSU] [AC:O07585] [GN:YHDP] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 49.9 KD PROTEIN IN CITA-SSPB INTERGENIC REGION] [SP:O07585] [DB:swissprot] >pir:[LN:F69826] [AC:F69826] [PN:hemolysin homolog yhdP] [GN:yhdP] [CL:hypothetical protein HI0107] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182956:g2633290] [LN:BSUB0006] [AC:Z99109:AL009126] [GN:yhdP] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 6 of 21):from 999501 to 1209940.] [NT:similar to hemolysin] [SP:O07585] [LE:32043] [RE:33377] [DI:complement] >gp:[GI:e1191881:g2226211] [LN:BSY14082] [AC:Y14082] [PN:hypothetical protein] [GN:yhdP] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis chromosomal DNA, region 72 to 75 degrees:spoVR to sspB.] [NT:Similarity to yhdT, this submission, and to] [SP:O07585] [LE:18691] [RE:20025] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_9884625_f2_464 3701 7473 1509 502 1226 9.0e−125 Description sp:[LN:YCLF_BACSU] [AC:P94408] [GN:YCLF] [OR:BACILLUS SUBTILIS] [DE:HYPOTHETICAL 53.3 KD PROTEIN IN SFP-GERKA INTERGENIC REGION] [SP:P94408] [DB:swissprot] >pir:[LN:C69762] [AC:C69762] [PN:di-tripeptide ABC transporter (membrane pr) homolog yclF] [GN:yclF] [CL:peptide transporter protein] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1182334:g2632668] [LN:BSUB0003] [AC:Z99106:AL009126] [GN:yclF] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 3 of 21):from 402751 to 611850.] [NT:similar to di-tripeptide ABC transporter (membrane] [SP:P94408] [LE:13065] [RE:14543] [DI:complement] >gp:[GI:d1009635:g1805438] [LN:D50453] [AC:D50453] [PN:homologue of Di-tripeptide transporter Dtp of L.] [GN:yclF] [OR:Bacillus subtilis] [SR:Bacillus subtilis (strain:168 trpC2) DNA] [DB:genpept-bct1] [DE:Bacillus subtilis DNA for 25–36 degree region containing theamyE-srfA region, complete cds.] [LE:95468] [RE:96946] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503001001_989010_c1_1128 3702 7474 408 135 371 3.6e−34 Description pir:[LN:G70024] [AC:G70024] [PN:conserved hypothetical protein yutM] [GN:yutM] [CL:conserved hypothetical protein HI0376] [OR:Bacillus subtilis] [DB:pir2] >gp:[GI:e1184295:g2635713] [LN:BSUB0017] [AC:Z99120:AL009126] [GN:yutM] [FN:unknown] [OR:Bacillus subtilis] [DB:genpept-bct1] [DE:Bacillus subtilis complete genome (section 17 of 21):from 3197001 to 3414420.] [NT:similar to hypothetical proteins] [LE:107656] [RE:108018] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_11291_c2_183 3703 7475 153 50 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_1369012_c2_207 3704 7476 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_13790943_c1_161 3705 7477 1644 547 2797 3.0e−291 Description pir:[LN:C56976] [AC:C56976] [PN:transfer complex protein TrsK] [GN:trsK] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310618] [LN:STATRSC] [AC:L11998] [GN:trsK] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:10475] [RE:12115] [DI:direct] >gp:[GI:g3676445] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein TraK] [GN:traK] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:similar to transfer-associated proteins of] [LE:34078] [RE:35718] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_14507827_c3_220 3706 7478 168 55 273 8.7e−24 Description pir:[LN:F56976] [AC:F56976] [PN:transfer complex protein TrsO′] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g3676448] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf55; possibly truncated by 1S257 transposon] [LE:37179] [RE:37346] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_14844187_c2_195 3707 7479 3081 1026 5411 0.0 Description sp:[LN:SYIP_STAAU] [AC:P41368] [GN:MUPR] [OR:STAPHYLOCOCCUS AUREUS] [EC:6.1.1.5] [DE:(ISOLEUCINE--TRNA LIGASE) (ILERS) (MUPIROCIN RESISTANCE PROTEIN)] [SP:P41368] [DB:swissprot] >gp:[GI:g581558] [LN:SADNAMUPR] [AC:X75439] [PN:isoleucyl tRNA synthetase] [GN:ileS] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid encoded DNA, mup R gene.] [SP:P41368] [LE:477] [RE:3551] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_15631901_c3_234 3708 7480 645 214 943 8.8e−95 Description gp:[GI:g3676416] [LN:AF051917] [AC:AF051917:L19570] [PN:putative resolvase Res] [GN:res] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:2779] [RE:3336] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_156910_f2_62 3709 7481 483 160 729 4.2e−72 Description gp:[GI:g3676415] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf149] [LE:2068] [RE:2484] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_19625062_c3_225 3710 7482 165 54 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_19665885_c1_175 3711 7483 1728 575 2999 0.0 Description gp:[GI:g3676419] [LN:AF051917] [AC:AF051917:L19570] [PN:LtrC-like protein] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf575; similar to Lactococcus lactis pRS01 LtrC] [LE:6350] [RE:8074] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_19744010_c3_232 3712 7484 288 95 466 3.1e−44 Description gp:[GI:g3676414] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf423] [LE:755] [RE:2026] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_2115625_f2_61 3713 7485 195 64 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_2150037_c1_180 3714 7486 336 111 464 5.0e−44 Description gp:[GI:g3676421] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf90] [LE:10316] [RE:10588] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_21754035_f3_110 3715 7487 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23468753_c3_236 3716 7488 1647 548 2838 1.4e−295 Description gp:[GI:g3676418] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid phSK41, complete sequence.] [NT:Orf538] [LE:4531] [RE:6147] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_2359417_c2_211 3717 7489 309 102 392 2.1e−36 Description gp:[GI:g3676422] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf77] [LE:10692] [RE:10925] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23603382_c2_196 3718 7490 603 200 688 9.2e−68 Description sp:[LN:YIL2_STAAU] [AC:P41370] [OR:STAPHYLOCOCCUS AUREUS] [DE:HYPOTHETICAL PROTEIN IN ILES 3′REGION (ORF C) (FRAGMENT)] [SP:P41370] [DB:swissprot] >pir:[LN:S40262] [AC:S40262] [PN:hypothetical protein C] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g438228] [LN:SADNAMUPR] [AC:X75439] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid encoded DNA, mup R gene.] [NT:ORF C] [SP:P41370] [LE:3621] [RE:>4013] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23651712_c2_191 3719 7491 480 159 779 2.1e−77 Description pir:[LN:B56976] [AC:B56976] [PN:transfer protein complex TrsJ] [GN:trsJ] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310617] [LN:STATRSC] [AC:L11998] [GN:trsJ] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:10014] [RE:10478] [DI:direct] >gp:[GI:g3676444] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein TraJ] [GN:traJ] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:33617] [RE:34081] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23727302_c3_215 3720 7492 1296 431 2175 2.5e−225 Description pir:[LN:G36891] [AC:G36891] [PN:transfer complex protein TrsF] [GN:trsF] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310613] [LN:STATRSC] [AC:L11998] [GN:trsF] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:5011] [RE:6291] [DI:direct] >gp:[GI:g3676440] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein TraF] [GN:traF] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:28614] [RE:29894] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23959802_c2_201 3721 7493 234 77 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23959802_f1_16 3722 7494 162 53 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23959802_f1_32 3723 7495 135 44 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23959802_f1_51 3724 7496 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23959802_f2_70 3725 7497 174 57 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_23959802_f3_119 3726 7498 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24001537_c2_187 3727 7499 750 249 1184 2.5e−120 Description pir:[LN:E36891] [AC:E36891] [PN:transfer complex protein TrsD] [GN:trsD] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310611] [LN:STATRSC] [AC:L11998] [GN:trsD] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:2283] [RE:2966] [DI:direct] >gp:[GI:g3676438] [LN:AF0519171 [AC:AF051917:L19570] [PN:TraD] [GN:traD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:25886] [RE:26569] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24298387_c1_171 3728 7500 147 48 68 0.045 Description sp:[LN:PSBH_CHLVU] [AC:P56323] [GN:PSBH] [OR:CHLORELLA VULGARIS] [DE:PHOTOSYSTEM II 10 KD PHOSPHOPROTEIN] [SP:P56323] [DB:swissprot] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24393803_f1_28 3729 7501 171 56 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24415937_c2_189 3730 7502 489 162 819 1.2e−81 Description pir:[LN:I36891] [AC:I36891] [PN:transfer complex protein TrsH] [GN:trsH] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310615] [LN:STATRSC] [AC:L11998] [GN:trsH] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:7395] [RE:7880] [DI:direct] >gp:[GI:g3676442] [LN:AF051917] [AC:AF051917:L19570] [PN:lipoprotein TraH] [GN:traH] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:signal peptide recognized as a pheromone by the] [LE:30998] [RE:31483] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24664812_c1_155 3731 7503 423 140 671 5.8e−66 Description pir:[LN:D36891] [AC:D36891] [PN:transfer complex protein TrsC] [GN:trsC] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310610] [LN:STATRSC] [AC:L11998] [GN:trsC] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:1889] [RE:2296] [DI:direct] >gp:[GI:g3676437] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein TraC] [GN:traC] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:25492] [RE:25899] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24723137_f1_49 3732 7504 225 74 315 3.1e−28 Description pir:[LN:A36891] [AC:A36891] [PN:transfer complex protein TrsN] [GN:trsN] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g3676434] [LN:AF051917] [AC:AF051917:L19570] [PN:putative regulator of transfer genes ArtA] [GN:artA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:23764] [RE:23952] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_24792033_c2_192 3733 7505 138 45 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_25587777_f1_52 3734 7506 264 87 444 6.6e−42 Description gp:[GI:g3676425] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf86] [LE:12564] [RE:12824] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_26594052_c1_150 3735 7507 336 111 567 6.1e−55 Description gp:[GI:g3676424] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf109] [LE:12231] [RE:12560] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_26600927_c2_206 3736 7508 786 261 1347 1.4e−137 Description gp:[GI:g3676417] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf259] [LE:3618] [RE:4397] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_29558262_c2_205 3737 7509 129 42 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_30273550_c1_162 3738 7510 432 143 671 5.8e−66 Description pir:[LN:E56976] [AC:E56976] [PN:transfer complex protein TrsM] [GN:trsM] [CL:single-stranded DNA-binding protein homology] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310620] [LN:STATRSC] [AC:L11998] [GN:trsM] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:13127] [RE:13519] [DI:direct] >gp:[GI:g3676447] [LN:AF051917] [AC:AF051917:L19570] [PN:putative single-stranded DNA binding protein] [GN:traM] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:36730] [RE:37122] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_30503392_c2_188 3739 7511 1083 360 1889 5.0e−195 Description gp:[GI:g3676441] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein TraG] [GN:traG] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:29912] [RE:30988] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_33786251_c3_230 3740 7512 1113 370 1926 6.0e−199 Description sp:[LN:AACA_STAAU] [AC:P14507] [GN:AACA-APHD] [OR:STAPHYLOCOCCUS AUREUS:ENTEROCOCCUS FAECALIS] [SR:,STREPTOCOCCUS FAECALIS] [EC:2.3.1.—:2.7.1.—] [DE:AMINOGLYCOSIDE PHOSPHOTRANSFERASE, [APH[2′′))] [SP:P14507] [DB:swissprot] >pir:[LN:S26353] [AC:S26353] [PN:aminoglycoside resistance protein aacA-aphD] [OR:Staphylococcus aureus] [DB:pir2] >pir:[LN:A26048] [AC:A26048] [PN:aminoglycoside acetyltransferase] [OR:Enterococcus faecalis] [DB:pir2] >gp:[GI:g152948] [LN:STAAGLSRA] [AC:M18086:M29261] [PN:aminoglycoside resistance protein] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain SK982) DNA] [DB:genpept-bct1] [DE:S. aureus transposon 4001 aacA-aphD aminoglycoside resistance gene, complete cds, and right and left IS256 transposase genes.] [LE:1725] [RE:3164] [DI:direct] >gp:[GI:g153586] [LN:STRBRP] [AC:M13771] [OR:Enterococcus faecalis] [SR:S. faecalis DNA, clone pSF815A] [DB:genpept-bct1] [DE:Streptococcus faecalis 6′-aminoglycoside acetyltransferasephosphotransferase (AAC(6′)-APH(2′)) bifunctional resistance protein, complete cds.] [NT:AAC(6′)-APH(2′) bifunctional resistance protein] [LE:304] [RE:1743] [DI:direct] >gp:[GI:g3676454] [LN:AF051917] [AC:AF051917:L19570] [PN:bifunctional aminoglycoside modifying enzyme] [GN:aacA-aphD] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:42505] [RE:43944] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_33786251_f2_66 3741 7513 390 129 644 4.2e−63 Description sp:[LN:TRA6_STAAU] [AC:P19775] [GN:TNP] [OR:STAPHYLOCOCCUS AUREUS] [DE:TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS256 IN TRANSPOSON TN4001] [SP:P19775] [DB:swissprot] >pir:[LN.:JS0296] [AC:JS0296] [PN:transposase] [GN:tnp] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g152947] [LN:STAAGLSRA] [AC:M18086:M29261] [PN:transposase] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (strain SK982) DNA] [DB:genpept-bct1] [DE:S. aureus transposon 4001 aacA-aphD aminoglycoside resistance gene, complete cds, and right and left IS256 transposase genes.] [LE:102] [RE:1274] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_34242300_c1_158 3742 7514 2037 678 3430 0.0 Description pir:[LN:F36891] [AC:F36891] [PN:transfer complex protein TrsE] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310612] [LN:STATRSC] [AC:L11998] [GN:trsE] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:2981] [RE:4999] [DI:direct] >gp:[GI:g3676439] [LN:AF051917] [AC:AF051917:L19570] [PN:putative ATPase TraE] [GN:traE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:26584] [RE:28602] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_34642562_c1_174 3743 7515 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_35397177_c2_182 3744 7516 1062 353 1760 2.3e−181 Description gp:[GI:g3676423] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf346] [LE:11188] [RE:12228] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_35397177_c3_241 3745 7517 132 44 142 3.1e−09 Description gp:[GI:g3676423] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf346] [LE:11188] [RE:12228] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_36048212_c3_221 3746 7518 774 257 783 7.9e−78 Description sp:[LN:YIL1_STAAU] [AC:P41369] [OR:STAPHYLOCOCCUS AUREUS] [DE:HYPOTHETICAL PROTEIN IN ILES 5′REGION (ORF B) (FRAGMENT)] [SP:P41369] [DB:swissprot] >pir:[LN:S40261] [AC:S40261] [PN:hypothetical protein B] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g438227] [LN:SADNAMUPR] [AC:X75439] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid encoded DNA, mup R gene.] [NT:ORF B] [SP:P41369] [LE:<1] [RE:450] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_36605260_c1_169 3747 7519 630 209 1077 5.5e−109 Description gp:[GI:g3676413] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf204] [LE:72] [RE:686] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_3907943_f3_103 3748 7520 2010 669 3498 0.0 Description gp:[GI:g3676420] [LN:AF051917] [AC:AF051917:L19570] [PN:oriT nickase Nes] [GN:nes] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:8115] [RE:10112] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_3908407_c3_214 3749 7521 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_4300002_c1_153 3750 7522 126 41 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_4428802_f2_57 3751 7523 168 55 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_4486075_c1_154 3752 7524 975 324 1640 1.2e−168 Description pir:[LN:B36891] [AC:B36891] [PN:transfer complex protein TrsA] [GN:trsA] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310608] [LN:STATRSC] [AC:L11998] [GN:trsA] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:521] [RE:1495] [DI:direct] >gp:[GI:g3676435] [LN:AF051917] [AC:AF051917:L19570] [PN:TraA] [GN:traA] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:24124] [RE:25098] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_4586062_c1_176 3753 7525 141 46 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_4724035_c1_170 3754 7526 1134 377 1728 5.7e−178 Description gp:[GI:g3676414] [LN:AF051917] [AC:AF051917:L19570] [PN:unknown] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [NT:Orf423] [LE:755] [RE:2026] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_4745437_c2_190 3755 7527 2118 705 3603 0.0 Description pir:[LN:A56976] [AC:A56976] [PN:transfer complex protein TrsI] [GN:trsI] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310616] [LN:STATRSC] [AC:L11998] [GN:trsI] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:7896] [RE:9998] [DI:direct] >gp:[GI:g3676443] [LN:AF051917] [AC:AF051917:L19570] [PN:putative topoisomerase TraI] [GN:traI] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:31499] [RE:33601] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_5109675_c2_186 3756 7528 324 107 535 1.5e−51 Description pir:[LN:C36891] [AC:C36891] [PN:transfer complex protein TrsB] [GN:trsB] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310609] [LN:STATRSC] [AC:L11998] [GN:trsB] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:1512] [RE:1829] [DI:direct] >gp:[GI:g3676436] [LN:AF051917] [AC:AF051917:L19570] [PN:putative membrane protein TraB] [GN:traB] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:25115] [RE:25432] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_5314202_c3_219 3757 7529 918 305 1524 2.4e−156 Description pir:[LN:D56976] [AC:D56976] [PN:transfer complex protein TrsL] [GN:trsL] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g310619] [LN:STATRSC] [AC:L11998] [GN:trsL] [OR:Staphylococcus aureus] [SR:Staphylococcus aureus (individual_isolate pG01) DNA] [DB:genpept-bct1] [DE:Staphylococcus aureus conjugative transfer gene complex (trs).] [NT:putative] [LE:12193] [RE:13110] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_6929686_c1_152 3758 7530 693 230 1199 6.5e−122 Description gp:[GI:g1762100] [LN:SEU40385] [AC:U40385] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK818 insertion sequence IS257 (818B) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] >gp:[GI:g1762102] [LN:SEU40386] [AC:U40386] [PN:transposase] [GN:tnp] [OR:Staphylococcus epidermidis] [DB:genpept-bct1] [DE:Staphyloccous epidermidis plasmid pSK818 insertion sequence IS257 (818C) putative transposase gene, complete cds.] [NT:Tnp; putative transposase] [LE:57] [RE:731] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_6929686_c1_163 3759 7531 693 230 1201 4.0e−122 Description pir:[LN:A60634] [AC:A60634:C30471:S26349] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46597] [LN:SAIS2571] [AC:X53952] [PN:transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pSH6 DNA for insertion sequences IS257-1 and IS256.] [LE:188] [RE:862] [DI:direct] >gp:[GI:g3676452] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:40946] [RE:41620] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_6929686_c1_168 3760 7532 693 230 1205 1.5e−122 Description pir:[LN:C60634] [AC:C60634:S26351] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46600] [LN:SAIS2572] [AC:X53951] [PN:putative transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pSH6 DNA for insertion sequences IS257-2, IS257-3 and IS256.] [LE:1752] [RE:2426] [DI:direct] >gp:[GI:g3676456] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpG] [GN:tnpG] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:45713] [RE:46387] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_6929686_c2_197 3761 7533 660 219 1116 4.1e−113 Description pir:[LN:A60634] [AC:A60634:C30471:S26349] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46597] [LN:SAIS2571] [AC:X53952] [PN:transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pSH6 DNA for insertion sequences IS257-1 and IS256.] [LE:188] [RE:862] [DI:direct] >gp:[GI:g3676452] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:40946] [RE:41620] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_6929686_c3_229 3762 7534 693 230 1201 4.0e−122 Description pir:[LN:A60634] [AC:A60634:C30471:S26349] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46597] [LN:SAIS2571] [AC:X53952] [PN:transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pSH6 DNA for insertion sequences IS257-1 and IS256.] [LE:188] [RE:862] [DI:direct] >gp:[GI:g3676452] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpE] [GN:tnpE] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:40946] [RE:41620] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_6929686_f3_115 3763 7535 684 227 1196 1.4e−121 Description pir:[LN:B60634] [AC:B60634:S26350] [PN:probable transposase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g46599] [LN:SAIS2572] [AC:X53951] [PN:putative transposase] [OR:Staphylococcus aureus] [DB:genpept-bct1] [DE:S. aureus plasmid pSH6 DNA for insertion sequences IS257-2, IS257-3 and IS256.] [LE:556] [RE:1221] [DI:complement] >gp:[GI:g3676455] [LN:AF051917] [AC:AF051917:L19570] [PN:putative transposase TnpF] [GN:tnpF] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:44517] [RE:45182] [DI:complement] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012391_822802_c3_213 3764 7536 1011 336 1647 2.2e−169 Description gp:[GI:g3676426] [LN:AF051917] [AC:AF051917:L19570] [PN:putative replication initiation protein Rep] [GN:rep] [OR:Staphylococcus aureus] [DB:genpept-bct2] [DE:Staphylococcus aureus plasmid pSK41, complete sequence.] [LE:13205] [RE:14164] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_1442583_c1_19 3765 7537 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_1442583_c3_25 3766 7538 144 47 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_23671885_c1_18 3767 7539 159 52 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_2776391_f3_12 3768 7540 207 68 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_29323431_f3_15 3769 7541 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_30495306_f2_6 3770 7542 123 40 Description NO-HIT ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_34023375_c2_23 3771 7543 501 166 790 1.4e−78 Description sp:[LN:REMA_STAAU] [AC:P13969] [GN:REPL:REP] [OR:STAPHYLOCOCCUS AUREUS:STAPHYLOCOCCUS SIMULANS] [DE:REPLICATION AND MAINTENANCE PROTEIN (PLASMID REPLICATION PROTEIN)] [SP:P13969] [DB:swissprot] >pir:[LN:A29827] [AC:A29827:C46568] [PN:replication protein REP] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g153064] [LN:PE5PE5A] [AC:M17990] [GN:repL] [OR:Plasmid pE5] [SR:Plasmid pE5 DNA] [DB:genpept-bct1] [DE:Plasmid pE5 (from Staphylococcus aureus, strain RN451) repL protein and ermC protein, complete cds.] [LE:389] [RE:865] [DI:direct] >gp:[GI:g506624] [LN:STAPT48CG] [AC:M19652] [OR:Plasmid pT48] [SR:Plasmid pT48 (from S. aureus strain T48) DNA] [DB:genpept-bct1] [DE:Plasmid pT48 (from S. aureus strain T48) complete genome.] [NT:putative. ORF B.] [LE:64] [RE:540] [DI:complement] >gp:[GI:g2407672] [LN:AF019140] [AC:AF019140] [PN:Rep] [GN:rep] [OR:Staphylococcus simulans] [DB:genpept-bct2] [DE:Staphylococcus simulans erythromycin resistance plasmid pPV142 rRNAN-6-methyltransferase (ermM) and replication protein (rep) genes, complete cds.] [NT:plasmid replication protein] [LE:1699] [RE:2175] [DI:direct] >gp:[GI:g1791222] [LN:SCU82607] [AC:U82607] [PN:plasmid replication protein] [OR:Staphylococcus chromogenes] [DB:genpept-bct2] [DE:Staphylococcus chromogenes plasmid pPV141 erythromycin resistance plasmid, rRNA N-6-methyltransferase (ermM) and plasmid replication protein genes, complete cds.] [LE:1583] [RE:2059] [DI:direct] ORF Name NT ID AA ID NT LN AA LN Score P-Value AI7503012392_4304683_c2_21 3772 7544 771 256 1270 2.0e−129 Description sp:[LN:ERM4_STAAU] [AC:P13978] [GN:ERMC] [OR:STAPHYLOCOCCUS AUREUS] [EC:2.1.1.48] [DE:RESISTANCE PROTEIN)] [SP:P13978] [DB:swissprot] >pir:[LN:B46568] [AC:B46568] [PN:ermC protein] [CL:rRNA (adenine-N6-)-methyltransferase] [OR:Staphylococcus aureus] [DB:pir2] >gp:[GI:g455358] [LN:STAPT48CG] [AC:M19652] [PN:23S RNA methylase] [GN:ermC] [OR:Plasmid pT48] [SR:Plasmid pT48 (from S. aureus strain T48) DNA] [DB:genpept-bct1] [DE:Plasmid pT48 (from S. aureus strain T48) complete genome.] [LE:988] [RE:1722] [DI:complement] 

1. An isolated nucleic acid comprising a nucleotide sequence encoding an S. epidermidis polypeptide of SEQ ID NO:5607.
 2. A recombinant expression vector comprising the nucleic acid of claim 1 operably linked to a transcription regulatory element.
 3. A cell comprising a recombinant expression vector of claim
 2. 4. A method for producing an S. epidermidis polypeptide comprising culturing a cell of claim 3 under conditions that permit expression of the polypeptide.
 5. An isolated nucleic acid comprising a nucleotide sequence of SEQ ID NO:1835, or its complement, wherein said nucleic acid encodes an S. epidermidis polypeptide or a fragment of at least twenty amino acid residues.
 6. A recombinant expression vector comprising the nucleic acid of claim 5 operably linked to a transcription regulatory element.
 7. A cell comprising a recombinant expression vector of claim
 6. 8. A method for producing an S. epidermidis polypeptide comprising culturing a cell of claim 7 under conditions that permit expression of the polypeptide.
 9. A probe comprising a nucleotide sequence consisting of at least forty contiguous nucleotides of a nucleotide sequence of SEQ ID NO:1835 or its complement. 